EWM24378.1, cds6293 (CDS) Nannochloropsis gaditana

Overview
NameEWM24378.1
Unique Namecds6293
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:217038..217709 -
Alignment locationCM002468.1:215954..216160 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24378.1
Productankyrin repeat protein
Orig transcript idgnl|cribi|Naga_100313g5.7268.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:217038..217709 -
CM002468.1supercontigCM002468.1:215954..216160 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Homology
BLAST of EWM24378.1 vs. NCBI_GenBank
Match: gi|585105776|gb|EWM24378.1| (ankyrin repeat protein [Nannochloropsis gaditana])

HSP 1 Score: 600.897 bits (1548), Expect = 0.000e+0
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0
Query:    1 MAANMPFSIVAVEEEVDLVMAEFVTAARQECLIAATRRGDVSTVAELLEQDNSLLYHTIHRKTSLLVVAVKHGHHALCEFLIRKGVEVNKICNAGLTAVHHAAMLPDSQAIPLIHLLVKHGAHLNPPPHTRRYGWQSPLHLAVEKKRLGAVRELVAMGSSIFGRNGRQQTPLALCGQFSAVAKAMDEGFRLQRLRSLIRRLFLLSGTLPLMPPPGETKDRDLASEGRKVPLVQRYLTFCLERSTFCARRGSYRQSGRRTEAPASSSADNFPVESIAADFTSSGATYLKERQA 292
            MAANMPFSIVAVEEEVDLVMAEFVTAARQECLIAATRRGDVSTVAELLEQDNSLLYHTIHRKTSLLVVAVKHGHHALCEFLIRKGVEVNKICNAGLTAVHHAAMLPDSQAIPLIHLLVKHGAHLNPPPHTRRYGWQSPLHLAVEKKRLGAVRELVAMGSSIFGRNGRQQTPLALCGQFSAVAKAMDEGFRLQRLRSLIRRLFLLSGTLPLMPPPGETKDRDLASEGRKVPLVQRYLTFCLERSTFCARRGSYRQSGRRTEAPASSSADNFPVESIAADFTSSGATYLKERQA
Sbjct:    1 MAANMPFSIVAVEEEVDLVMAEFVTAARQECLIAATRRGDVSTVAELLEQDNSLLYHTIHRKTSLLVVAVKHGHHALCEFLIRKGVEVNKICNAGLTAVHHAAMLPDSQAIPLIHLLVKHGAHLNPPPHTRRYGWQSPLHLAVEKKRLGAVRELVAMGSSIFGRNGRQQTPLALCGQFSAVAKAMDEGFRLQRLRSLIRRLFLLSGTLPLMPPPGETKDRDLASEGRKVPLVQRYLTFCLERSTFCARRGSYRQSGRRTEAPASSSADNFPVESIAADFTSSGATYLKERQA 292          
BLAST of EWM24378.1 vs. NCBI_GenBank
Match: gi|260787041|ref|XP_002588564.1| (hypothetical protein BRAFLDRAFT_256339 [Branchiostoma floridae] >gi|229273728|gb|EEN44575.1| hypothetical protein BRAFLDRAFT_256339, partial [Branchiostoma floridae])

HSP 1 Score: 62.7734 bits (151), Expect = 1.410e-8
Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = 0
Query:   35 ATRRGDVSTVAELLEQDNSLLYHTIHRKTSLLVVAVKHGHHALCEFLIRKGVEVNKICNAGLTAVHHAAMLPDSQAIPLIHLLVKHGAHLNPPPHTRRYGWQSPLHLAVEKKRLGAVRELVAMGSSIFGRNGRQQTP 171
            A  +G +    ELL+  + +    + RKT+L V A + GH  + + L++KG  VN    AG TA+HHA+   D    P++  L+K GA++N      R GW S LH A  +  L  V ELV   ++I  R+G + TP
Sbjct:    6 ACHKGHLGVSQELLKAGSDVFSIDLTRKTALHVAA-EQGHAGIVDALLKKGASVNMRDKAGFTALHHAS---DRGFAPVVENLLKAGANVNAKD--LRNGWTS-LHRACSRGYLYIVHELVKGKANINLRDGVRITP 135          
BLAST of EWM24378.1 vs. NCBI_GenBank
Match: gi|196005483|ref|XP_002112608.1| (hypothetical protein TRIADDRAFT_25329 [Trichoplax adhaerens] >gi|190584649|gb|EDV24718.1| hypothetical protein TRIADDRAFT_25329, partial [Trichoplax adhaerens])

HSP 1 Score: 61.6178 bits (148), Expect = 2.067e-8
Identity = 34/96 (35.42%), Postives = 57/96 (59.38%), Query Frame = 0
Query:   66 LVVAVKHGHHALCEFLIRKGVEVNKICNAGLTAVHHAAMLPDSQAIPLIHLLVKHGAHLNPPPHTRRYGWQSPLHLAVEKKRLGAVRELVAMGSSI 161
            L +A K+G++   EFLI +G +VN   +AG T +H+AA+   S +I +  L+++ GA +      R  G  +PLHLAV+K     +++L  +G+ I
Sbjct:    3 LHIAAKNGNYEFAEFLISRGAKVNSKDDAGRTCLHYAAL---SNSISITELIIRKGADIED----RDTGGHTPLHLAVKKGCTQVIKKLFELGADI 91          
BLAST of EWM24378.1 vs. NCBI_GenBank
Match: gi|734542208|gb|KHN72016.1| (Tankyrase-1 [Toxocara canis])

HSP 1 Score: 65.855 bits (159), Expect = 2.112e-8
Identity = 54/178 (30.34%), Postives = 83/178 (46.63%), Query Frame = 0
Query:   21 AEFVTAARQECLIAATRRGDVSTVAELLEQDNSLLYHTIHRKTSLLVVAVKHGHHALCEFLIRKGVEVNKICNAGLTAVHHAAMLPDSQAIPLIHLLVKHGAHLNPPPHTRRYGWQ-SPLHLAVEKKRLGAVRELVAMGSSIFGRNGRQQTPLALCGQFSAVAKAMDEGFRLQRLRSL 197
            A F    R+E L+ A R G  STV+ LL Q N   +    RK++ L +A  +    L E L+ KG +V+     GL  +H+A        + ++ LL+K GA +N         W+ +PLH A+ K R+     L+  G+  F +N   ++P+ L         A +E FR Q L   
Sbjct:  224 AVFTGDYRKEDLLEAARNGCESTVSRLLTQFNVSCHADSGRKSTPLHLAAGYNRVGLVELLLSKGADVHAKDKGGLVPLHNACSFGH---VEVVKLLLKAGAGVNEEDL-----WKFTPLHEAISKGRMAVALLLMLHGADYFRKNASGKSPIEL---------APNEAFRKQLLNDF 384          
BLAST of EWM24378.1 vs. NCBI_GenBank
Match: gi|1061481231|gb|ODM98598.1| (Tankyrase [Orchesella cincta])

HSP 1 Score: 65.4698 bits (158), Expect = 2.995e-8
Identity = 55/206 (26.70%), Postives = 98/206 (47.57%), Query Frame = 0
Query:    5 MPFSIVAVEEEVDLVMAEFVTAARQECLIAATRRGDVSTVAELLEQDNSLLYHTIHRKTSLLVVAVKHGHHALCEFLIRKGVEVNKICNAGLTAVHHAAMLPDSQAIPLIHLLVKHGAHLNPPPHTRRYGWQSPLHLAVEKKRLGAVRELVAMGSSIFGRNGRQQTPLALCGQFSAVAKAMDEGFRLQRLRSLIRRLFLLSGTLPL 210
            MP  +   E+  DL+            L+ A ++G+++ V +LL  +N     T  R ++ L +A  + +  + E+L+ KG +VN     GL  +H+A+       + +  LL+K+ A +N    T ++G+ +PLH + +K R      L+A G+  F +N    TPL L     AVA         + +RSL++       +LP+
Sbjct:  846 MPIDLCKDEDVADLLQG-------NSALLEAAKKGNLAKVKKLLTPENINCRDTHGRNSTALHLAAGYNNLEVAEYLLEKGADVNSRDKGGLIPLHNASSY---GHLDIAALLIKYNAQVNA---TDKWGF-TPLHESAQKSRTHLCALLLAHGADPFAKNQEGHTPLDL-----AVA---------EDVRSLLQDAMTTHQSLPV 1023          
BLAST of EWM24378.1 vs. NCBI_GenBank
Match: gi|1055133773|ref|WP_066881513.1| (hypothetical protein [Dechloromonas denitrificans] >gi|985874830|gb|KXB31837.1| hypothetical protein AT959_05700 [Dechloromonas denitrificans])

HSP 1 Score: 62.7734 bits (151), Expect = 4.757e-8
Identity = 49/148 (33.11%), Postives = 74/148 (50.00%), Query Frame = 0
Query:   25 TAARQECLIAATRRGDVSTVAELLEQDNSLLYHTIHRKTSLLVVAVKHGHHALCEFLIRKGVEVNKICNAGLTAVHHAAMLPDSQAIPLIHLLVKHGAHLNPPPHTRRYGWQSPLHLAVEKKRLGAVRELVAMGSSIFGRNGRQQTPL 172
            TAA  + LI A + GD   VAE++++  S+    I   T L+++A + GH  L +FLI++  +VN    AG TA+  AA       + ++ LLV  GA +N P      GW +PL  A     L   R L+  G+ +   +    TPL
Sbjct:   19 TAATYDDLINAAKLGDTKEVAEIVQRGASIDSTDIEGNT-LMMLAARDGHADLVDFLIKQRAKVNARNAAGDTALRLAAF---RGHLKVVELLVAGGAQINTP------GW-TPLAYAAFAGHLDIARLLIKAGADVNAPSENGTTPL 155          
BLAST of EWM24378.1 vs. NCBI_GenBank
Match: gi|123406003|ref|XP_001302721.1| (hypothetical protein [Trichomonas vaginalis G3] >gi|121884037|gb|EAX89791.1| hypothetical protein TVAG_366950 [Trichomonas vaginalis G3])

HSP 1 Score: 64.3142 bits (155), Expect = 5.411e-8
Identity = 39/132 (29.55%), Postives = 71/132 (53.79%), Query Frame = 0
Query:   48 LEQDNSLLYHTIHRKTSLLVVAVKHGHHALCEFLIRKGVEVNKICNAGLTAVHHAAMLPDSQAIPLIHLLVKHGAHLNPPPHTRRYGWQSPLHLAVEKKRLGAVRELVAMGSSIFGRNGRQQTPLALCGQFS 179
            +E   S+L    + K + L +A ++ +  + EFLI +G+E+N I N G T +H AA     +   ++++LV HGA +N     R    ++PL  A E   +GA+  L++ G++I  ++   +T L    +F+
Sbjct:  192 VEDKQSILSSKDNTKQTALHIAAQNNYKEMVEFLISQGIEINAIDNFGKTPLHQAAYFNFKE---IVNILVLHGAEIN----RRNNEMKTPLQKAAENNSIGALEVLLSHGANINEKDNLGKTALHYMIEFN 316          
BLAST of EWM24378.1 vs. NCBI_GenBank
Match: gi|255953891|ref|XP_002567698.1| (Pc21g06530 [Penicillium rubens Wisconsin 54-1255] >gi|211589409|emb|CAP95550.1| Pc21g06530 [Penicillium rubens Wisconsin 54-1255] >gi|1021541105|gb|KZN88409.1| Ankyrin-2 [Penicillium chrysogenum])

HSP 1 Score: 64.3142 bits (155), Expect = 6.991e-8
Identity = 52/175 (29.71%), Postives = 83/175 (47.43%), Query Frame = 0
Query:   46 ELLEQDNSLLYHTIHRKTSLLVVAVKHGHHALCEFLIRKGVEVNKICNAGLTAVHHAAMLPDSQAIPLIHLLVKHGAHLNPPPHTRRYGWQSPLHLAVEKKRLGAVRELVAMGSSIFGRNGRQQTPLAL---CGQFSAVAKAMDEGFRLQRLRSLIRR------LFLLSGTLPLM 211
            E+L Q    +        + L ++V     A+ E L+RKG ++N  C AGLT +H+A M   + +I +  LL+  GA +    H  +   Q PLH+A  +  +  V  L   G+S+  R+     PL++   CG  +AV K +D G  L +      R      L  +SG LP++
Sbjct:  633 EILSQKKGSMAKIDAMGRTALHLSVIQAQFAVVEPLLRKGADLNSQCAAGLTPLHYACM---ADSIEIATLLLLEGADIEAAEHQHQ---QRPLHIAAARSSIRLVDLLCDKGASLDARDRVGDRPLSVACCCGHVAAVRKLLDRGSPLYQKHQATSRSDSPLCLAAMSGHLPVV 801          
BLAST of EWM24378.1 vs. NCBI_GenBank
Match: gi|755986343|ref|XP_011311151.1| (PREDICTED: tankyrase [Fopius arisanus])

HSP 1 Score: 63.929 bits (154), Expect = 8.729e-8
Identity = 69/272 (25.37%), Postives = 121/272 (44.49%), Query Frame = 0
Query:   32 LIAATRRGDVSTVAELLEQDNSLLYHTIHRKTSLLVVAVKHGHHALCEFLIRKGVEVNKICNAGLTAVHHAAMLPDSQAIPLIHLLVKHGAHLNPPPHTRRYGWQSPLHLAVEKKRLGAVRELVAMGSSIFGRNGRQQTPLALCGQFSAVAKAMDEGFRLQRLRSLI------RRLFLLSG--------TLPLMPPPGETKDRDLASEGRKVPLVQRYLTFCLERSTFCARRGSYRQSGRRTEAPASSSADNFPVESIAADFTSSGATYLKE 289
            L+ A ++G+++ V  L+ QDN        R ++ L +A  + +  + EFL+ +G +VN     GL  +H+A+       + +  LL+K+   +N    T ++G+ +PLH A +K R      L+A G+  F +N   Q+P+ L      V   + +    Q+L S I           +SG        ++P++PPP  T++  +   G      Q  L   + R T C       ++G+  E  AS       V ++A    S G  +L E
Sbjct:  648 LLDAAKKGNLARVQRLVTQDNINCRDAQGRNSTPLHLAAGYNNLEVAEFLLERGADVNSQDKGGLIPLHNASSY---GHLDIAALLIKYSTVVNA---TDKWGF-TPLHEAAQKGRTQLCALLLAHGADPFLKNQEGQSPVDLASA-DDVRCLLQDAMASQQLVSSIPTASGGNANGNISGGKRPPSIISVPVVPPPTLTQETVIMPSG-----AQMLLCVPVARPTTCLSPMPSIENGQEKEKDASEDRGCAAVTTVAGFLASLGLEHLLE 906          
BLAST of EWM24378.1 vs. NCBI_GenBank
Match: gi|597882164|gb|EYC31526.1| (hypothetical protein Y032_0004g2201 [Ancylostoma ceylanicum])

HSP 1 Score: 63.929 bits (154), Expect = 9.444e-8
Identity = 46/130 (35.38%), Postives = 69/130 (53.08%), Query Frame = 0
Query:   44 VAELLEQDNSLLYHTIHRKTSLLVVAVKHGHHA-LCEFLIRKGVEVNKICNAGLTAVHHAAMLPDSQAIPLIHLLVKHGAHLNPPPHTRRYGWQSPLHLAVEKKRLGAVRELVAMGSSIFGRNGRQQTPL 172
            ++ LLE D   L  T     + L  AV++G +A   EFL++KG ++    N G TA+H AA L +S A+P+ +L+   G  LN    TR     +PLHLA E  ++  V  L+  G+ +  R+    TPL
Sbjct:  267 LSALLEIDGRFLNATDKDGYTPLHYAVQNGQNAKTIEFLVKKGCDILAAANDGTTALHIAATLAES-AVPIEYLVECKGIDLN----TRNGDGMTPLHLASEWSKVSRVDALIKAGAEVDARSHDDATPL 391          
The following BLAST results are available for this feature:
BLAST of EWM24378.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105776|gb|EWM24378.1|0.000e+0100.00ankyrin repeat protein [Nannochloropsis gaditana][more]
gi|260787041|ref|XP_002588564.1|1.410e-835.77hypothetical protein BRAFLDRAFT_256339 [Branchiost... [more]
gi|196005483|ref|XP_002112608.1|2.067e-835.42hypothetical protein TRIADDRAFT_25329 [Trichoplax ... [more]
gi|734542208|gb|KHN72016.1|2.112e-830.34Tankyrase-1 [Toxocara canis][more]
gi|1061481231|gb|ODM98598.1|2.995e-826.70Tankyrase [Orchesella cincta][more]
gi|1055133773|ref|WP_066881513.1|4.757e-833.11hypothetical protein [Dechloromonas denitrificans]... [more]
gi|123406003|ref|XP_001302721.1|5.411e-829.55hypothetical protein [Trichomonas vaginalis G3] >g... [more]
gi|255953891|ref|XP_002567698.1|6.991e-829.71Pc21g06530 [Penicillium rubens Wisconsin 54-1255] ... [more]
gi|755986343|ref|XP_011311151.1|8.729e-825.37PREDICTED: tankyrase [Fopius arisanus][more]
gi|597882164|gb|EYC31526.1|9.444e-835.38hypothetical protein Y032_0004g2201 [Ancylostoma c... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6308rna6308Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications