EWM24401.1, cds6272 (CDS) Nannochloropsis gaditana

Overview
NameEWM24401.1
Unique Namecds6272
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:176862..177246 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24401.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102273g1.4654.mrna
GbkeyCDS
End range.
End range177246
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:176862..177246 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24401.1 vs. NCBI_GenBank
Match: gi|585105805|gb|EWM24401.1| (hypothetical protein Naga_102273g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 246.514 bits (628), Expect = 1.991e-82
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 
Query:    1 MEVVMRREKGRVSGRNGRGGGDEEGGKKRVAKGWSGVEPRRDGRESRDRGVGRANGGRERRREGGREGRREGRRKGRYKETLRAELCNKEVCRPYLALTLSGHAPRDQNELKMEHLPPQFPALPPPPP 128
            MEVVMRREKGRVSGRNGRGGGDEEGGKKRVAKGWSGVEPRRDGRESRDRGVGRANGGRERRREGGREGRREGRRKGRYKETLRAELCNKEVCRPYLALTLSGHAPRDQNELKMEHLPPQFPALPPPPP
Sbjct:    1 MEVVMRREKGRVSGRNGRGGGDEEGGKKRVAKGWSGVEPRRDGRESRDRGVGRANGGRERRREGGREGRREGRRKGRYKETLRAELCNKEVCRPYLALTLSGHAPRDQNELKMEHLPPQFPALPPPPP 128
The following BLAST results are available for this feature:
BLAST of EWM24401.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105805|gb|EWM24401.1|1.991e-82100.00hypothetical protein Naga_102273g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6287rna6287Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications