EWM24418.1, cds6255 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24418.1 vs. NCBI_GenBank
Match: gi|585105845|gb|EWM24418.1| (peptidase s8 and s53 subtilisin kexin sedolisin, partial [Nannochloropsis gaditana]) HSP 1 Score: 226.098 bits (575), Expect = 6.318e-75 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 Query: 1 LPPSLPPSFQPAYSNWGRVVDIYAPGGGIYSASNAGNNQYTYLSGTSMSTPLVAGGVACVLAGDPGRSCSNDALVRKLINPSVDVAQGGPLQANMRPNRPLFYLPPDADVKCP 113 LPPSLPPSFQPAYSNWGRVVDIYAPGGGIYSASNAGNNQYTYLSGTSMSTPLVAGGVACVLAGDPGRSCSNDALVRKLINPSVDVAQGGPLQANMRPNRPLFYLPPDADVKCP Sbjct: 1 LPPSLPPSFQPAYSNWGRVVDIYAPGGGIYSASNAGNNQYTYLSGTSMSTPLVAGGVACVLAGDPGRSCSNDALVRKLINPSVDVAQGGPLQANMRPNRPLFYLPPDADVKCP 113
BLAST of EWM24418.1 vs. NCBI_GenBank
Match: gi|553179146|ref|XP_005852656.1| (proprotein convertase subtilisin kexin type 9 preproprotein [Nannochloropsis gaditana CCMP526] >gi|422295878|gb|EKU23177.1| proprotein convertase subtilisin kexin type 9 preproprotein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 77.411 bits (189), Expect = 3.011e-14 Identity = 48/113 (42.48%), Postives = 64/113 (56.64%), Query Frame = 0 Query: 10 QPAYSNWGRVVDIYAPGGGIYSASNAGNNQYTYLSGTSMSTPLVAGGVACVL-----AGDPGRSCSNDALVRKLINPSVDVAQ--GGPLQANMRPNRPLFYLPPDA--DVKCP 113 + AYSN G VDIYAPG I+SA + Y Y +GTS + P V G +ACVL A P S+ +L+ LINP+++V GP Q+ RP Y+PP A D++CP Sbjct: 509 REAYSNQGTAVDIYAPGTNIFSAGIENDQAYGYRTGTSQAAPFVTGAIACVLGDALAANGPVACRSSSSLLEALINPNIEVKHRTRGP-QSFGDNKRPFLYVPPGAKYDLRCP 620
BLAST of EWM24418.1 vs. NCBI_GenBank
Match: gi|585104171|gb|EWM23228.1| (proprotein convertase subtilisin kexin type 9 preproprotein [Nannochloropsis gaditana]) HSP 1 Score: 77.0258 bits (188), Expect = 3.251e-14 Identity = 48/113 (42.48%), Postives = 64/113 (56.64%), Query Frame = 0 Query: 10 QPAYSNWGRVVDIYAPGGGIYSASNAGNNQYTYLSGTSMSTPLVAGGVACVL-----AGDPGRSCSNDALVRKLINPSVDVAQ--GGPLQANMRPNRPLFYLPPDA--DVKCP 113 + AYSN G VDIYAPG I+SA + Y Y +GTS + P V G +ACVL A P S+ +L+ LINP+++V GP Q+ RP Y+PP A D++CP Sbjct: 502 REAYSNQGTAVDIYAPGTNIFSAGIENDQAYGYRTGTSQAAPFVTGAIACVLGDALAANGPVACRSSSSLLEALINPNIEVKHRTRGP-QSFGDNKRPFLYVPPGAKYDLRCP 613
BLAST of EWM24418.1 vs. NCBI_GenBank
Match: gi|1183348428|gb|ORX76905.1| (subtilisin-like protein, partial [Anaeromyces robustus]) HSP 1 Score: 61.2326 bits (147), Expect = 1.090e-8 Identity = 40/115 (34.78%), Postives = 59/115 (51.30%), Query Frame = 0 Query: 10 QPAYSNWGRVVDIYAPGGGIY-SASNAGNNQYTYLSGTSMSTPLVAGGVACVLAGDPGRSCSNDALVRKLINPS-----VDVAQGGPLQANMRPNRPL------FYLPPDADVKC 112 + +YSN+G VDIYAPG Y + N YT + GTS +TP+VAG A +++ P +N+ + +KLI S VD+ + G PNR + Y P D ++ C Sbjct: 24 KASYSNYGDCVDIYAPGEVTYPNIFNGSTKDYTSIHGTSCATPIVAGVAASIMSEHPEIKFNNELMKKKLIEMSIKDVIVDLKKRGSKDT---PNRFINNGKRSIYSPDDGNIYC 135
BLAST of EWM24418.1 vs. NCBI_GenBank
Match: gi|1134544656|gb|OMH82280.1| (Subtilase-type proteinase psp3 [Zancudomyces culisetae] >gi|1134544738|gb|OMH82346.1| Subtilase-type proteinase psp3 [Zancudomyces culisetae]) HSP 1 Score: 60.8474 bits (146), Expect = 1.399e-8 Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0 Query: 11 PAYSNWGRVVDIYAPGGGIYSASNAGNNQYTYLSGTSMSTPLVAGGVACVLAGDP 65 P +SNWG+ VDI APG I S+SNAG +Q SGTSM+ P V G VA +L+ +P Sbjct: 373 PTWSNWGKCVDILAPGTRIISSSNAGGDQTIVKSGTSMAAPFVTGVVAAMLSDNP 427
BLAST of EWM24418.1 vs. NCBI_GenBank
Match: gi|943930828|ref|WP_055564303.1| (serine protease [Streptomyces atriruber]) HSP 1 Score: 60.8474 bits (146), Expect = 1.424e-8 Identity = 35/80 (43.75%), Postives = 46/80 (57.50%), Query Frame = 0 Query: 10 QPAYSNWGRVVDIYAPGGGIYSASNAGNNQYTYLSGTSMSTPLVAGGVACVLAGDP-------GRSCSNDALVRKLINPS 82 Q +SN+G VVDIYAPG I S N G++ +SGTSM+TP V G A LAG P ++ ++ A K+ NPS Sbjct: 311 QSDFSNYGSVVDIYAPGSDITSDWNTGDDATNTISGTSMATPHVVGAAAVYLAGHPDAKPADVAKALTDGATADKISNPS 390
BLAST of EWM24418.1 vs. NCBI_GenBank
Match: gi|1111316137|gb|APH72151.1| (hypothetical protein BSQ44_12845 [Mesorhizobium sp. B7]) HSP 1 Score: 60.8474 bits (146), Expect = 1.971e-8 Identity = 37/114 (32.46%), Postives = 58/114 (50.88%), Query Frame = 0 Query: 1 LPPSLPPSFQPAYSNWGRVVDIYAPGGGIYSA--SNAGNNQYTYLSGTSMSTPLVAGGVACVLAGDPGRSCSNDALVRKLINPSVDVAQGGPLQANMRPNRPLFYLPPDADVKC 112 + S + ++SNWG ++D+ APG I ++ S + NN Y YLSGTSM+ P VAG A + + P + S + L V+++ G + +R + L YL A K Sbjct: 358 VASSTKSDVRSSFSNWGSLIDVVAPGSSILASYVSGSSNNFYDYLSGTSMAAPHVAGAFAALRSAKPTATVSQ--IEAALKATGVNISSAGTTKPRIRVDSALTYLGGGATAKA 469
BLAST of EWM24418.1 vs. NCBI_GenBank
Match: gi|1180012371|ref|WP_083534725.1| (hypothetical protein [Mesorhizobium sp. B7]) HSP 1 Score: 60.8474 bits (146), Expect = 2.031e-8 Identity = 37/114 (32.46%), Postives = 58/114 (50.88%), Query Frame = 0 Query: 1 LPPSLPPSFQPAYSNWGRVVDIYAPGGGIYSA--SNAGNNQYTYLSGTSMSTPLVAGGVACVLAGDPGRSCSNDALVRKLINPSVDVAQGGPLQANMRPNRPLFYLPPDADVKC 112 + S + ++SNWG ++D+ APG I ++ S + NN Y YLSGTSM+ P VAG A + + P + S + L V+++ G + +R + L YL A K Sbjct: 376 VASSTKSDVRSSFSNWGSLIDVVAPGSSILASYVSGSSNNFYDYLSGTSMAAPHVAGAFAALRSAKPTATVSQ--IEAALKATGVNISSAGTTKPRIRVDSALTYLGGGATAKA 487
BLAST of EWM24418.1 vs. NCBI_GenBank
Match: gi|515934284|ref|WP_017364867.1| (serine protease [Methylococcus capsulatus]) HSP 1 Score: 60.4622 bits (145), Expect = 2.326e-8 Identity = 31/57 (54.39%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 10 QPAYSNWGRVVDIYAPGGGIYSASNAGNNQYTYLSGTSMSTPLVAGGVACVLAGDPG 66 + +YSN+G +DI+APG I SASNAG+N +SGTSM+TP VAG A L+ PG Sbjct: 304 RASYSNYGTCLDIFAPGSSITSASNAGDNATEVMSGTSMATPHVAGAAALYLSAFPG 360
BLAST of EWM24418.1 vs. NCBI_GenBank
Match: gi|499262655|ref|WP_010960195.1| (serine protease [Methylococcus capsulatus] >gi|53758717|gb|AAU93008.1| serine protease, subtilase family [Methylococcus capsulatus str. Bath]) HSP 1 Score: 60.4622 bits (145), Expect = 2.348e-8 Identity = 31/57 (54.39%), Postives = 40/57 (70.18%), Query Frame = 0 Query: 10 QPAYSNWGRVVDIYAPGGGIYSASNAGNNQYTYLSGTSMSTPLVAGGVACVLAGDPG 66 + +YSN+G +DI+APG I SASNAG+N +SGTSM+TP VAG A L+ PG Sbjct: 304 RASYSNYGTCLDIFAPGSSITSASNAGDNATEVMSGTSMATPHVAGAAALYLSAFPG 360 The following BLAST results are available for this feature:
BLAST of EWM24418.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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