EWM30047.1, cds625 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30047.1 vs. NCBI_GenBank
Match: gi|585112677|gb|EWM30047.1| (Dihydrodipicolinate reductase [Nannochloropsis gaditana]) HSP 1 Score: 682.559 bits (1760), Expect = 0.000e+0 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0 Query: 1 MRLFLLLVAFPALVSSFVGMLPSRHKQSQGRQSQLRMMAKLPKVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRVVESHQSSKADTSGTAKALIASFGTLVGKPYKVEDVIAMIRDREGQLEFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRIYAEGTVDALTYLAQQHGPDKKVFNMVDVLKAGAMK 334 MRLFLLLVAFPALVSSFVGMLPSRHKQSQGRQSQLRMMAKLPKVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRVVESHQSSKADTSGTAKALIASFGTLVGKPYKVEDVIAMIRDREGQLEFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRIYAEGTVDALTYLAQQHGPDKKVFNMVDVLKAGAMK Sbjct: 1 MRLFLLLVAFPALVSSFVGMLPSRHKQSQGRQSQLRMMAKLPKVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRVVESHQSSKADTSGTAKALIASFGTLVGKPYKVEDVIAMIRDREGQLEFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRIYAEGTVDALTYLAQQHGPDKKVFNMVDVLKAGAMK 334
BLAST of EWM30047.1 vs. NCBI_GenBank
Match: gi|585112678|gb|EWM30048.1| (Dihydrodipicolinate reductase [Nannochloropsis gaditana]) HSP 1 Score: 439.499 bits (1129), Expect = 3.451e-153 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 Query: 1 MRLFLLLVAFPALVSSFVGMLPSRHKQSQGRQSQLRMMAKLPKVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRV 214 MRLFLLLVAFPALVSSFVGMLPSRHKQSQGRQSQLRMMAKLPKVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRV Sbjct: 1 MRLFLLLVAFPALVSSFVGMLPSRHKQSQGRQSQLRMMAKLPKVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRV 214
BLAST of EWM30047.1 vs. NCBI_GenBank
Match: gi|219112073|ref|XP_002177788.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410673|gb|EEC50602.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 304.679 bits (779), Expect = 8.201e-100 Identity = 156/288 (54.17%), Postives = 193/288 (67.01%), Query Frame = 0 Query: 46 VMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRVVESHQSSKADTSGTAKALIASFGTLVGKPYKVEDVIAMIRDREGQLEFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRIYAEGTVDALTYLAQQHGPDK--KVFNMVDVLKAG 331 VMVNG+PG M A ACLR+GL++ V +TGP V+ V D G ++RLV + D E L VAG + + RL+A+DYTHP+AVN N Y + FVMGTTGGDRD+L+KDVE G + VIAPNM KQIVA+QA LE +A +P AFEGY L VVESHQ +KADTSGTAKA+I+S TL G D I MIRD + L FGVPE + GHAFHTY L SPDGSV FQ +HNV GR +YAEGT DA+ +LA++ +K +VFNM++VL+ G Sbjct: 1 VMVNGMPGPMATAAAEACLRKGLQLAPVAMTGPDVEASTFIVTDTVTGTSSSVRLVP-----SSDTE---ELVSAVAGMQTASERLLAIDYTHPSAVNGNAKFYVEQNIPFVMGTTGGDRDELMKDVE--GHFCVIAPNMGKQIVAMQAALEDLANKYPSAFEGYQLEVVESHQKTKADTSGTAKAVISSIKTLAGDEKYSNDDIKMIRDEKEALAFGVPEDAMMGHAFHTYTLTSPDGSVSFQLQHNVAGRTVYAEGTADAVKFLAKKMKTEKIPRVFNMINVLEEG 278
BLAST of EWM30047.1 vs. NCBI_GenBank
Match: gi|1210525968|dbj|GAX15254.1| (4-hydroxy-tetrahydrodipicolinate reductase [Fistulifera solaris]) HSP 1 Score: 305.064 bits (780), Expect = 6.921e-99 Identity = 161/311 (51.77%), Postives = 205/311 (65.92%), Query Frame = 0 Query: 26 KQSQGRQSQLRMMAKLPKVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRVVESHQSSKADTSGTAKALIASFGTLVGKP-YKVEDVIAMIRDREGQLEFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRIYAEGTVDALTYLAQQ-HGPDKKVFNMVDVLKAGAMK 334 +QS R + L M +MVNGLPG M A ACLR+GL++ V +TGP V+ + V D GK Q ++L+ T +LQ +AG + SG L+A+DYTHP+AVN N Y + K+ FVMGTTGGDRD+L+KDV+ G + VIAPNM KQIVA+QA LE +A FPGAF+GY L V ESHQ +KADTSGTAKA+I S L + +ED I MIRD + + FGVP + GHAFHTY L S DGSV FQ +HNV GR IYAEGT DA+ +L++Q H + +VFNM+DVL+ GAM+ Sbjct: 55 QQSARRITTLHAMDD--DTFIMVNGLPGPMATAAAEACLRKGLKLAPVAMTGPDVEPSTISVFDTVTGKKQDVKLIPSKET--------EKLQASIAGLKTSG-NLLAIDYTHPSAVNSNAQFYVKEKIPFVMGTTGGDRDQLMKDVQ--GHFCVIAPNMGKQIVAMQAALEDLATKFPGAFDGYKLSVTESHQKTKADTSGTAKAVIESIEKLASDDNFTIED-IKMIRDDDEAVAFGVPPDAIKGHAFHTYTLTSADGSVSFQLQHNVAGRTIYAEGTADAVKFLSKQIHSGEPRVFNMIDVLEKGAME 351
BLAST of EWM30047.1 vs. NCBI_GenBank
Match: gi|224003431|ref|XP_002291387.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973163|gb|EED91494.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 301.212 bits (770), Expect = 3.349e-98 Identity = 153/293 (52.22%), Postives = 195/293 (66.55%), Query Frame = 0 Query: 46 VMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRES--GTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRVVESHQSSKADTSGTAKALIASFGTLVGKPYKVEDVIAMIRDREGQLEFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRIYAEGTVDALTYLAQQ--HGPDKKVFNMVDVLKAGAMK 334 +MVNG+PG M A ACLR+GL + +TGP ++ + V D +RL+ P T G E + L GL RES ++A+DYTHP+AVN NG+ YA +K+ FVMGTTGGDRD LL D+E +AVIAPNM KQIVA+QAGLE +A FP AF GY L V ESHQ +KADTSGTAKA+IAS L + +E I M+RD E L FGVP+ L GHAFHTY L S DGSV+F+ +HNV GR +YAEGT DA+ +LA + G +V++M+DVL+AGA++ Sbjct: 14 IMVNGMPGPMATAAAEACLRKGLSLSPFAMTGPDIESSTITVYDDVTDTSANVRLI--PATDDGRMEIVSSLAGL----RESVGDKNVLAIDYTHPSAVNANGVFYADNKLPFVMGTTGGDRDLLLSDMESREAFAVIAPNMGKQIVAMQAGLEDLAAKFPSAFAGYKLEVTESHQKTKADTSGTAKAVIASLKKLSDDDFDMEQDIEMLRDDESSLAFGVPKEALNGHAFHTYTLTSADGSVQFELKHNVSGRTVYAEGTADAVKFLASKVFEGKGGRVYSMIDVLQAGALE 300
BLAST of EWM30047.1 vs. NCBI_GenBank
Match: gi|397567388|gb|EJK45557.1| (hypothetical protein THAOC_35827 [Thalassiosira oceanica]) HSP 1 Score: 302.753 bits (774), Expect = 4.310e-98 Identity = 158/317 (49.84%), Postives = 206/317 (64.98%), Query Frame = 0 Query: 22 PSRHKQSQGRQSQLRMMAKLP-KVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTR--LIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRVVESHQSSKADTSGTAKALIASFGTLVGKPYKVEDVIAMIRDREGQLEFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRIYAEGTVDALTYLAQQHGP-DKKVFNMVDVLKAGAMK 334 PSR ++ A+ P + VMVNG+PG M A ACLR+GL + V +TGP ++ V V D G+ +RL+ P G EE + L AG RE+ + ++A+DYTHP+AVN N + YA + + FVMGTTGGDRDKL+ DV +AVIAPNM KQIVA+QAGLE +A FP AF GY L+V ESHQ +KADTSGTAKA+I S TL + +E I M+RD E L FGV E L GHAFHTY L SPD SV+F+ +HNV GR +YAEGT DA+ +LA + G + KV++M+DVL++G ++ Sbjct: 37 PSRMTETTQTDGGADADAEDPASLRVMVNGMPGPMASAAAEACLRKGLSLSPVAMTGPDIEPSTVTVTDDVTGRSADVRLI--PANEDGREEIKSSL----AGIREAAGKENVLAIDYTHPSAVNGNAVFYAENDLPFVMGTTGGDRDKLMDDVVSRKAFAVIAPNMGKQIVAMQAGLEDLATKFPSAFAGYKLKVTESHQKTKADTSGTAKAVIDSLKTLSDDDFNIEKDIEMLRDDESSLAFGVSEDALNGHAFHTYTLTSPDKSVQFELKHNVEGRTVYAEGTADAVKFLATKVGSGEGKVYSMIDVLRSGGLE 347
BLAST of EWM30047.1 vs. NCBI_GenBank
Match: gi|1210521105|dbj|GAX19853.1| (4-hydroxy-tetrahydrodipicolinate reductase [Fistulifera solaris]) HSP 1 Score: 300.056 bits (767), Expect = 2.030e-97 Identity = 160/311 (51.45%), Postives = 205/311 (65.92%), Query Frame = 0 Query: 26 KQSQGRQSQLRMMAKLPKVAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRVVESHQSSKADTSGTAKALIASFGTLVGKP-YKVEDVIAMIRDREGQLEFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRIYAEGTVDALTYLAQQ-HGPDKKVFNMVDVLKAGAMK 334 +QS R + L M +MVNG+PG M A ACLR+GL++ V +TGP V+ + V D K Q ++L+ +E + +LQ +AG + SG L+A+DYTHP+AVN N Y + K+ FVMGTTGGDRD+L+KDV+ G + VIAPNM KQIVA+QA LE +A FPGAF+GY L V ESHQ +KADTSGTAKA+I S L + +ED I IRD E + FGVP + GHAFHTY L S DGSV FQ +HNV GR IYAEGT DA+ +L++Q H + +VFNM+DVLK GAM+ Sbjct: 26 QQSARRITTLHAMDD--DTFIMVNGMPGPMATAAAEACLRKGLKLAPVAMTGPDVEPSTISVYDTVTEKKQDVKLIPS-------KEIE-KLQASIAGLKASG-NLLAIDYTHPSAVNSNAQFYVKEKIPFVMGTTGGDRDQLMKDVQ--GHFCVIAPNMGKQIVAMQAALEDLATKFPGAFDGYKLSVTESHQKTKADTSGTAKAVIESIEKLASDDNFTIED-IKRIRDDEEAVAFGVPPDAIKGHAFHTYTLTSADGSVSFQLQHNVAGRTIYAEGTADAVKFLSKQIHSGEPRVFNMIDVLKEGAME 322
BLAST of EWM30047.1 vs. NCBI_GenBank
Match: gi|299115195|emb|CBN74026.1| (dihydrodipicolinate reductase [Ectocarpus siliculosus]) HSP 1 Score: 300.056 bits (767), Expect = 3.419e-97 Identity = 161/292 (55.14%), Postives = 197/292 (67.47%), Query Frame = 0 Query: 44 VAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRVVESHQSSKADTSGTAKALIASFGTLVGKPYKVEDVIAMIRDREGQLEFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRIYAEGTVDALTYLAQQ--HGPDKKVFNMVDVLKAGAM 333 V VM+NGL G MG +VAAACLR+G + ++G E V V D +GG P T+ LV P A E CD + L R SG ++ VDYT P+AVN N YA+H ++FVMGTTGGDRD L+ E +G+YAVIAPNM KQIVALQ+ ++ MA FPG+F Y L + ESHQS+K DTSGTAKAL A F L + Y V+ I +RD EGQL FGVPE L GHAFHTY L S DG+VEFQFRHNV GR +YAEGT DA+ +LA + G DK+V+NM+DVL+ G M Sbjct: 51 VWVMMNGLSGKMGLDVAAACLRKGFRIAPYAMSGSGSGE--VSVADPKGGDPTTVTLV--PSDDA--EGCDKAVAELK--RRCSGGSVVVVDYTTPSAVNANAEFYAKHGLNFVMGTTGGDRDALMSVTEGSGVYAVIAPNMGKQIVALQSAIDNMAREFPGSFGDYKLEITESHQSAKVDTSGTAKALAADFAKLTAEDYDVKS-INKVRDTEGQLAFGVPEEHLAGHAFHTYSLKSNDGTVEFQFRHNVCGRLMYAEGTADAVEFLAGKAGSGADKRVYNMLDVLREGGM 333
BLAST of EWM30047.1 vs. NCBI_GenBank
Match: gi|922866563|gb|KOO33395.1| (dihydrodipicolinate reductase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 288.886 bits (738), Expect = 2.567e-93 Identity = 164/303 (54.13%), Postives = 205/303 (67.66%), Query Frame = 0 Query: 43 KVAVMVNGLPGAMGKEVAAACLRR-GLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRVVESHQSSKADTSGTAKALIASFGTLVGKPYKVEDVIAMIRDREGQLEFG---------VPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRIYAEGTVDALTYLAQQ--HGPDKKVFNMVDVLKAGAM 333 VAVM+NGL GAMG+E+AA CL+R G+ + L + + V VDDG GG T+RL G E D + + A Y +SG+ L+ +D+THP+AVN N YA HK+ FVMGTTGGDR+ L+K +G YAVIAPNMAKQIVALQA LE MA FPG+F+GY+L VVESHQ+SKADTSGTAKA+ AS L G+ + I +R+ QL G VPEA L GHAFHTY L+S D +VEFQFRHNV+GR YAEGTVDA+ +LA+Q +K+V++MVDVL+AGAM Sbjct: 8 SVAVMMNGLRGAMGREIAAVCLKRPGVTLAPFAL---EKEGGEVVVDDGCGGPAVTVRLY-------GTEARDELAERVKAEYPQSGS-LVCIDFTHPSAVNGNAEWYAAHKLPFVMGTTGGDREALMKCTRASGTYAVIAPNMAKQIVALQAALEQMARDFPGSFDGYSLSVVESHQTSKADTSGTAKAISASLARLSGESDFTPERIVRVREPAEQLAGGGPSHTGVSPVPEAALSGHAFHTYSLVSGDKAVEFQFRHNVLGRSTYAEGTVDAVVFLARQMVAKAEKRVYDMVDVLRAGAM 299
BLAST of EWM30047.1 vs. NCBI_GenBank
Match: gi|1072227691|gb|OEU12430.1| (dihydrodipicolinate reductase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 278.485 bits (711), Expect = 1.327e-88 Identity = 155/338 (45.86%), Postives = 206/338 (60.95%), Query Frame = 0 Query: 5 LLLVAFPAL--VSSFVGMLPSRHKQSQGRQSQLRMMAKLPK----VAVMVNGLPGAMGKEVAAACLRRGLEVCSVGLTGPQVDEECVDVDDGEGGKPQTIRLVKGPVTGAGDEECDARLQGLVAGYRESGTRLIAVDYTHPTAVNPNGMLYARHKMDFVMGTTGGDRDKLLKDVEEAGIYAVIAPNMAKQIVALQAGLETMAGTFPGAFEGYNLRVVESHQSSKADTSGTAKALIASFGTLVGKPYKVEDVIAMIRDREGQLEFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRIYAEGTVDALTYLAQQHGPDK--KVFNMVDVLKAGAMK 334 +LLV F + V++F+ + P+ S S L M+ V VMVNG+PG M A ACLR+GL++ V +TGP + + V D K ++L+ + +E A ++G+ E ++A+DYTHP+AVN N Y K+ FVMGTTGGDR+KL++ V +A +AVIAPNMAKQIVA+QA LE +A FPG F Y + VESHQ +KADTSGTAKA+I S L + +D I MIRD EG +F VPE L GHAFH Y L S DGS EF HNV GR IYAEGT DA+ +LA + + KV++M+DVL+AG ++ Sbjct: 12 ILLVLFSSFFDVTAFL-VSPAVKTNSWKPSSSLIQMSSTDNDEADVFVMVNGMPGPMATAAAEACLRKGLKLTPVAMTGPDIKANTIVVYDPISEKSSQVKLIPS----SQKDELLAAIEGMKVSCGEKN--ILAIDYTHPSAVNSNAEFYVEQKLPFVMGTTGGDREKLMQGVNDAKHFAVIAPNMAKQIVAMQAALEDLAKKFPGCFSSYKMACVESHQKTKADTSGTAKAVIDSLKELSDDEFTYDD-IEMIRDDEGAKDFRVPEDALKGHAFHRYTLTSEDGSTEFALEHNVAGRAIYAEGTADAVKFLAGRLRAESEGKVYSMIDVLEAGGLE 341 The following BLAST results are available for this feature:
BLAST of EWM30047.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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