EWM24441.1, cds6232 (CDS) Nannochloropsis gaditana

Overview
NameEWM24441.1
Unique Namecds6232
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:84089..84116 +
Alignment locationCM002468.1:84210..84478 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24441.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100602g2.8854.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:84089..84116 +
CM002468.1supercontigCM002468.1:84210..84478 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24441.1 vs. NCBI_GenBank
Match: gi|585105888|gb|EWM24441.1| (hypothetical protein Naga_100602g2 [Nannochloropsis gaditana])

HSP 1 Score: 203.756 bits (517), Expect = 1.328e-66
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 
Query:    1 MWFATRKDQLRRHNDSKTSGKTKDRLHAFIGVNCNDHPSPVRTNRVKQNSVSNSGLNSTVFWQRLDVFKAIRPFDTSILKRCKQTGENDILVIEICVI 98
            MWFATRKDQLRRHNDSKTSGKTKDRLHAFIGVNCNDHPSPVRTNRVKQNSVSNSGLNSTVFWQRLDVFKAIRPFDTSILKRCKQTGENDILVIEICVI
Sbjct:    1 MWFATRKDQLRRHNDSKTSGKTKDRLHAFIGVNCNDHPSPVRTNRVKQNSVSNSGLNSTVFWQRLDVFKAIRPFDTSILKRCKQTGENDILVIEICVI 98
The following BLAST results are available for this feature:
BLAST of EWM24441.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105888|gb|EWM24441.1|1.328e-66100.00hypothetical protein Naga_100602g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6247rna6247Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications