EWM24442.1, cds6231 (CDS) Nannochloropsis gaditana

Overview
NameEWM24442.1
Unique Namecds6231
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:82845..82879 -
Alignment locationCM002468.1:82560..82648 -
Alignment locationCM002468.1:82172..82362 -
Alignment locationCM002468.1:81781..81913 -
Alignment locationCM002468.1:81480..81598 -
Alignment locationCM002468.1:81190..81321 -
Alignment locationCM002468.1:80962..81060 -
Alignment locationCM002468.1:80482..80771 -
Alignment locationCM002468.1:80122..80344 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24442.1
Productmolybdenum cofactor biosynthesis protein c
Orig transcript idgnl|cribi|Naga_100602g3.8855.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:82845..82879 -
CM002468.1supercontigCM002468.1:82560..82648 -
CM002468.1supercontigCM002468.1:82172..82362 -
CM002468.1supercontigCM002468.1:81781..81913 -
CM002468.1supercontigCM002468.1:81480..81598 -
CM002468.1supercontigCM002468.1:81190..81321 -
CM002468.1supercontigCM002468.1:80962..81060 -
CM002468.1supercontigCM002468.1:80482..80771 -
CM002468.1supercontigCM002468.1:80122..80344 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0019538protein metabolic process
GO:0006777Mo-molybdopterin cofactor biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR023045Mo_CF_biosynth-C
IPR002820Mopterin_CF_biosynth-C_dom
Homology
BLAST of EWM24442.1 vs. NCBI_GenBank
Match: gi|585105889|gb|EWM24442.1| (molybdenum cofactor biosynthesis protein c [Nannochloropsis gaditana])

HSP 1 Score: 893.649 bits (2308), Expect = 0.000e+0
Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 0
Query:    1 MRPCLSKGAAIRGLCRPAHVTGGVFTQRTEDGMHLALADGPGRSQQYRTFIFPTHAIATASANFTAAASHSVSSSSLPPSSSTASASLSHVDRQGQPTMVDVGGKTISSREAKARCRVVFPRQTMGSVLQYEGRKELMSSKGPVFSTAIVAGVMGAKKTSELIPFCHPLALDDCHLHVRFDEDLNRPNEVLIDCTVRVQGRTGVEMEALTGASMAALCIYDMCKATSHDILIKDLQLLSKSGGKRDVKRREVVTTIPFPPSSLPASRKREKRRKRDGRTRSGETGRLVSWTTQFEGRMEGEGEAGGEGGSPPHPTGPSGLGRNLTLDGGIGGNDGGCCKAKMGRDRGIGITERWRPCVRIPCMARVWGLQTDLLGYRVGGSESKEAGAWCLKQVNTRRKEGREWLAHSLRSKMMANTSRLHVRKIPRQEKGSQGRY 436
            MRPCLSKGAAIRGLCRPAHVTGGVFTQRTEDGMHLALADGPGRSQQYRTFIFPTHAIATASANFTAAASHSVSSSSLPPSSSTASASLSHVDRQGQPTMVDVGGKTISSREAKARCRVVFPRQTMGSVLQYEGRKELMSSKGPVFSTAIVAGVMGAKKTSELIPFCHPLALDDCHLHVRFDEDLNRPNEVLIDCTVRVQGRTGVEMEALTGASMAALCIYDMCKATSHDILIKDLQLLSKSGGKRDVKRREVVTTIPFPPSSLPASRKREKRRKRDGRTRSGETGRLVSWTTQFEGRMEGEGEAGGEGGSPPHPTGPSGLGRNLTLDGGIGGNDGGCCKAKMGRDRGIGITERWRPCVRIPCMARVWGLQTDLLGYRVGGSESKEAGAWCLKQVNTRRKEGREWLAHSLRSKMMANTSRLHVRKIPRQEKGSQGRY
Sbjct:    1 MRPCLSKGAAIRGLCRPAHVTGGVFTQRTEDGMHLALADGPGRSQQYRTFIFPTHAIATASANFTAAASHSVSSSSLPPSSSTASASLSHVDRQGQPTMVDVGGKTISSREAKARCRVVFPRQTMGSVLQYEGRKELMSSKGPVFSTAIVAGVMGAKKTSELIPFCHPLALDDCHLHVRFDEDLNRPNEVLIDCTVRVQGRTGVEMEALTGASMAALCIYDMCKATSHDILIKDLQLLSKSGGKRDVKRREVVTTIPFPPSSLPASRKREKRRKRDGRTRSGETGRLVSWTTQFEGRMEGEGEAGGEGGSPPHPTGPSGLGRNLTLDGGIGGNDGGCCKAKMGRDRGIGITERWRPCVRIPCMARVWGLQTDLLGYRVGGSESKEAGAWCLKQVNTRRKEGREWLAHSLRSKMMANTSRLHVRKIPRQEKGSQGRY 436          
BLAST of EWM24442.1 vs. NCBI_GenBank
Match: gi|1134130373|ref|WP_076373399.1| (cyclic pyranopterin monophosphate synthase MoaC [Mucilaginibacter lappiensis] >gi|1132064375|emb|SIR09090.1| cyclic pyranopterin monophosphate synthase subunit MoaC [Mucilaginibacter lappiensis])

HSP 1 Score: 196.823 bits (499), Expect = 5.058e-58
Identity = 91/162 (56.17%), Postives = 121/162 (74.69%), Query Frame = 0
Query:   88 LSHVDRQGQPTMVDVGGKTISSREAKARCRVVFPRQTMGSVLQYEGRKELMSSKGPVFSTAIVAGVMGAKKTSELIPFCHPLALDDCHLHVRFDEDLNRPNEVLIDCTVRVQGRTGVEMEALTGASMAALCIYDMCKATSHDILIKDLQLLSKSGGKRDVKR 249
            LSH+D+QG P+MVDV  K +++R A AR  VV P +    VLQY    E++S KGPVF TAI+AG+M AKKT +LIP CHPL +D+C++ ++    +N   EV+IDCT  +  +TG+EMEAL GAS+AAL IYDMCKA SHDI+IK+ +L++K+GGKRD KR
Sbjct:    2 LSHLDKQGNPSMVDVSEKQVTNRTATARSVVVLPEE----VLQYLSNGEVVSKKGPVFQTAIIAGIMAAKKTGDLIPLCHPLGMDNCNIVIQ----VNEQREVVIDCTASITAKTGIEMEALVGASIAALTIYDMCKAMSHDIIIKETKLIAKTGGKRDFKR 155          
BLAST of EWM24442.1 vs. NCBI_GenBank
Match: gi|1043554880|ref|WP_065397510.1| (cyclic pyranopterin monophosphate synthase MoaC [Chryseobacterium arthrosphaerae] >gi|1043515678|gb|OCA73505.1| molybdenum cofactor biosynthesis protein C [Chryseobacterium arthrosphaerae])

HSP 1 Score: 196.052 bits (497), Expect = 9.531e-58
Identity = 90/164 (54.88%), Postives = 122/164 (74.39%), Query Frame = 0
Query:   86 ASLSHVDRQGQPTMVDVGGKTISSREAKARCRVVFPRQTMGSVLQYEGRKELMSSKGPVFSTAIVAGVMGAKKTSELIPFCHPLALDDCHLHVRFDEDLNRPNEVLIDCTVRVQGRTGVEMEALTGASMAALCIYDMCKATSHDILIKDLQLLSKSGGKRDVKR 249
            +  +H+D+ GQP +VDVGGK I+SR+A A+  +  P     +VL    + +  + KG VF  AI+AG+MGAKKTSELIP CHP+ LD+C+LH++    LN  NE++I+CT  ++ +TGVEMEALTGAS+AAL IYDMCKA SHDI+IK+++L+ KSGGK D KR
Sbjct:    2 SEFTHLDKDGQPAIVDVGGKKITSRKAVAQAVISLPE----AVLHALQQDDFQTKKGSVFQIAIIAGIMGAKKTSELIPLCHPIGLDNCNLHIK----LNDNNEIVIECTASIEAKTGVEMEALTGASVAALTIYDMCKALSHDIVIKEIKLIEKSGGKNDFKR 157          
BLAST of EWM24442.1 vs. NCBI_GenBank
Match: gi|1087413670|emb|SDP25398.1| (cyclic pyranopterin monophosphate synthase subunit MoaC [Mucilaginibacter sp. OK268])

HSP 1 Score: 192.586 bits (488), Expect = 2.160e-56
Identity = 89/162 (54.94%), Postives = 119/162 (73.46%), Query Frame = 0
Query:   88 LSHVDRQGQPTMVDVGGKTISSREAKARCRVVFPRQTMGSVLQYEGRKELMSSKGPVFSTAIVAGVMGAKKTSELIPFCHPLALDDCHLHVRFDEDLNRPNEVLIDCTVRVQGRTGVEMEALTGASMAALCIYDMCKATSHDILIKDLQLLSKSGGKRDVKR 249
            LSH+D+QG P+MVDV  K ++ R A AR  VV P +    VLQ+    +L+S KGPVF TAI+AG+M AKKT +LIP CHPL +D+C++ +     +N   E++IDCT  +  +TG+EMEAL GAS+AAL IYDMCKA SHDI+IK+ +L++K+GGKRD KR
Sbjct:    2 LSHLDKQGNPSMVDVSEKQVTHRTATARSVVVLPAE----VLQHLANDDLVSKKGPVFQTAIIAGIMAAKKTGDLIPLCHPLGMDNCNVTIL----VNEQEEIVIDCTASITAKTGIEMEALVGASIAALTIYDMCKAMSHDIIIKETKLIAKTGGKRDFKR 155          
BLAST of EWM24442.1 vs. NCBI_GenBank
Match: gi|763362654|ref|WP_044220179.1| (cyclic pyranopterin monophosphate synthase MoaC [Phaeodactylibacter xiamenensis] >gi|690716249|gb|KGE88027.1| molybdenum cofactor biosynthesis protein MoaC [Phaeodactylibacter xiamenensis])

HSP 1 Score: 190.274 bits (482), Expect = 1.843e-55
Identity = 91/164 (55.49%), Postives = 121/164 (73.78%), Query Frame = 0
Query:   86 ASLSHVDRQGQPTMVDVGGKTISSREAKARCRVVFPRQTMGSVLQYEGRKELMSSKGPVFSTAIVAGVMGAKKTSELIPFCHPLALDDCHLHVRFDEDLNRPNEVLIDCTVRVQGRTGVEMEALTGASMAALCIYDMCKATSHDILIKDLQLLSKSGGKRDVKR 249
            ++ +H+D +G P MVDVG K +S R A+AR  VV   + M    Q EG+ EL + KGPVF TA++AG+M +KKT ELIP CHPL LD+C +H++    +N   EV+IDCT R+  +TGVEMEALTGA++AAL +YDMCKA SHDI+IK+ +L+ K+GGKRD KR
Sbjct:    2 STFTHLDAEGNPNMVDVGTKKVSRRTARARSIVVLGDEIMD---QLEGQ-ELHTKKGPVFQTAVLAGIMASKKTGELIPLCHPLGLDNCEVHIQ----VNEQREVVIDCTARITAKTGVEMEALTGATVAALTVYDMCKAFSHDIVIKETKLMEKTGGKRDFKR 157          
BLAST of EWM24442.1 vs. NCBI_GenBank
Match: gi|1111728422|gb|OJJ14927.1| (molybdenum cofactor biosynthesis protein C [marine bacterium AO1-C])

HSP 1 Score: 190.274 bits (482), Expect = 2.008e-55
Identity = 88/163 (53.99%), Postives = 122/163 (74.85%), Query Frame = 0
Query:   88 LSHVDRQGQPTMVDVGGKTISSREAKARCRVVFPRQTMGSVLQYEGRKELMSSKGPVFSTAIVAGVMGAKKTSELIPFCHPLALDDCHLHVRFDEDLNRPNEVLIDCTVRVQGRTGVEMEALTGASMAALCIYDMCKATSHDILIKDLQLLSKSGGKRDVKRR 250
            L+H+D++G P+MVDVGGK +++R A+AR  V  P + M  V      +++ + KG VF TAI+AG MGAKKTS+LIP CHPL+LD C   +R +E    PN+V+IDC VRV+G+TGVEMEALTGA++AAL +YDMCK  S DI+I++ +L+ K+GGK D +R+
Sbjct:    7 LTHIDQEGNPSMVDVGGKQVTTRHAQARTIVQLPPEVMQQV----KDQDIYTKKGSVFQTAIIAGTMGAKKTSDLIPLCHPLSLDSCKFDIRVEE----PNQVVIDCFVRVEGKTGVEMEALTGATVAALTVYDMCKGLSQDIVIQETKLMKKTGGKTDFERK 161          
BLAST of EWM24442.1 vs. NCBI_GenBank
Match: gi|671763100|gb|KFF74793.1| (molybdenum cofactor biosynthesis protein MoaC [Chryseobacterium sp. P1-3])

HSP 1 Score: 189.889 bits (481), Expect = 2.332e-55
Identity = 87/164 (53.05%), Postives = 120/164 (73.17%), Query Frame = 0
Query:   86 ASLSHVDRQGQPTMVDVGGKTISSREAKARCRVVFPRQTMGSVLQYEGRKELMSSKGPVFSTAIVAGVMGAKKTSELIPFCHPLALDDCHLHVRFDEDLNRPNEVLIDCTVRVQGRTGVEMEALTGASMAALCIYDMCKATSHDILIKDLQLLSKSGGKRDVKR 249
            +  +H+++ GQP +VDVG KT+++R+A AR  +  P   + + LQ +  K   + KG VF  AI+AG+MGAKKTSELIP CHP+ LD+C+L +    +LN  NE++I+CT  ++ +TGVEMEALTG S+AAL IYDMCKA SHDI+IK++ L+ KSGGK D KR
Sbjct:    2 SDFTHLNKSGQPAIVDVGNKTVTNRKAVARAIIALPENVLKA-LQQDNFK---TKKGSVFQIAIIAGIMGAKKTSELIPLCHPIGLDNCNLQI----ELNDNNEIVIECTASIEAKTGVEMEALTGVSVAALTIYDMCKALSHDIVIKEITLIEKSGGKNDFKR 157          
BLAST of EWM24442.1 vs. NCBI_GenBank
Match: gi|1095190940|emb|SEP04158.1| (cyclic pyranopterin monophosphate synthase subunit MoaC [Mucilaginibacter sp. OK283])

HSP 1 Score: 189.889 bits (481), Expect = 2.680e-55
Identity = 87/162 (53.70%), Postives = 119/162 (73.46%), Query Frame = 0
Query:   88 LSHVDRQGQPTMVDVGGKTISSREAKARCRVVFPRQTMGSVLQYEGRKELMSSKGPVFSTAIVAGVMGAKKTSELIPFCHPLALDDCHLHVRFDEDLNRPNEVLIDCTVRVQGRTGVEMEALTGASMAALCIYDMCKATSHDILIKDLQLLSKSGGKRDVKR 249
            L+H+D+QG P++VDV  K ++ R A AR  VV P +    VLQ+    +L+S KGPVF TAI+AG+M AKKT ELIP CHPL +D+C + V    ++N   E++I+CT  +  +TG+EMEAL GAS+AAL +YDMCKA SHDI+IK+ +L++K+GGKRD KR
Sbjct:    2 LTHIDKQGNPSIVDVSAKQVTHRTATARSIVVLPDE----VLQHLADGDLISKKGPVFQTAIIAGIMAAKKTGELIPLCHPLGMDNCQVTV----EVNEQQEIVIECTASITAKTGIEMEALVGASVAALTVYDMCKAMSHDIVIKETKLIAKTGGKRDFKR 155          
BLAST of EWM24442.1 vs. NCBI_GenBank
Match: gi|922054404|ref|WP_053328702.1| (cyclic pyranopterin monophosphate synthase MoaC [Chryseobacterium gallinarum] >gi|828460050|gb|AKK73971.1| molybdenum cofactor biosynthesis protein MoaC [Chryseobacterium gallinarum])

HSP 1 Score: 189.889 bits (481), Expect = 2.710e-55
Identity = 86/164 (52.44%), Postives = 120/164 (73.17%), Query Frame = 0
Query:   86 ASLSHVDRQGQPTMVDVGGKTISSREAKARCRVVFPRQTMGSVLQYEGRKELMSSKGPVFSTAIVAGVMGAKKTSELIPFCHPLALDDCHLHVRFDEDLNRPNEVLIDCTVRVQGRTGVEMEALTGASMAALCIYDMCKATSHDILIKDLQLLSKSGGKRDVKR 249
            +  +H+++ GQP +VDVG KT+++R+A AR  +  P     +VL+   + +  + KG VF  AI+AG+MGAKKTSELIP CHP+ LD+C+L +    +LN  NE++I+CT  ++ +TGVEMEALTG S+AAL IYDMCKA SHDI+IK++ L+ KSGGK D KR
Sbjct:    2 SDFTHLNKSGQPAIVDVGNKTVTNRKAVARAIIALPE----NVLKALQQDDFKTKKGSVFQIAIIAGIMGAKKTSELIPLCHPIGLDNCNLQI----ELNDNNEIVIECTASIEAKTGVEMEALTGVSVAALTIYDMCKALSHDIVIKEITLIEKSGGKNDFKR 157          
BLAST of EWM24442.1 vs. NCBI_GenBank
Match: gi|1087480139|emb|SDF04372.1| (cyclic pyranopterin monophosphate synthase subunit MoaC [Mucilaginibacter pineti])

HSP 1 Score: 189.504 bits (480), Expect = 3.148e-55
Identity = 87/162 (53.70%), Postives = 120/162 (74.07%), Query Frame = 0
Query:   88 LSHVDRQGQPTMVDVGGKTISSREAKARCRVVFPRQTMGSVLQYEGRKELMSSKGPVFSTAIVAGVMGAKKTSELIPFCHPLALDDCHLHVRFDEDLNRPNEVLIDCTVRVQGRTGVEMEALTGASMAALCIYDMCKATSHDILIKDLQLLSKSGGKRDVKR 249
            L+H+++QG P+MVDV  K ++ R A AR  VV P +    VL +  + +LMS KGPVF TAI+AG+M AKKT +LIP CHPL +D+C++ V    ++N   E++IDCT  +  +TG+EMEAL GAS+AAL +YDMCKA SHDI+IK+ +L++K+GGKRD KR
Sbjct:    2 LTHINKQGNPSMVDVTEKQVTHRTATARSVVVLPAE----VLAHLVKGDLMSKKGPVFQTAIIAGIMAAKKTGDLIPLCHPLGMDNCNITV----EVNEKQEIVIDCTASITAKTGIEMEALVGASIAALTVYDMCKAMSHDIVIKETKLIAKTGGKRDFKR 155          
The following BLAST results are available for this feature:
BLAST of EWM24442.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105889|gb|EWM24442.1|0.000e+0100.00molybdenum cofactor biosynthesis protein c [Nannoc... [more]
gi|1134130373|ref|WP_076373399.1|5.058e-5856.17cyclic pyranopterin monophosphate synthase MoaC [M... [more]
gi|1043554880|ref|WP_065397510.1|9.531e-5854.88cyclic pyranopterin monophosphate synthase MoaC [C... [more]
gi|1087413670|emb|SDP25398.1|2.160e-5654.94cyclic pyranopterin monophosphate synthase subunit... [more]
gi|763362654|ref|WP_044220179.1|1.843e-5555.49cyclic pyranopterin monophosphate synthase MoaC [P... [more]
gi|1111728422|gb|OJJ14927.1|2.008e-5553.99molybdenum cofactor biosynthesis protein C [marine... [more]
gi|671763100|gb|KFF74793.1|2.332e-5553.05molybdenum cofactor biosynthesis protein MoaC [Chr... [more]
gi|1095190940|emb|SEP04158.1|2.680e-5553.70cyclic pyranopterin monophosphate synthase subunit... [more]
gi|922054404|ref|WP_053328702.1|2.710e-5552.44cyclic pyranopterin monophosphate synthase MoaC [C... [more]
gi|1087480139|emb|SDF04372.1|3.148e-5553.70cyclic pyranopterin monophosphate synthase subunit... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6246rna6246Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications