EWM24455.1, cds6218 (CDS) Nannochloropsis gaditana

Overview
NameEWM24455.1
Unique Namecds6218
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:43352..43368 +
Alignment locationCM002468.1:43467..43560 +
Alignment locationCM002468.1:43757..43879 +
Alignment locationCM002468.1:44017..44115 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24455.1
Productbifunctional 6-phosphofructo-2-kinase
Orig transcript idgnl|cribi|Naga_100969g3.1409.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:43352..43368 +
CM002468.1supercontigCM002468.1:43467..43560 +
CM002468.1supercontigCM002468.1:43757..43879 +
CM002468.1supercontigCM002468.1:44017..44115 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0006003fructose 2,6-bisphosphate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR0030946Pfruct_kin
IPR029033His_PPase_superfam
Homology
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|585105912|gb|EWM24455.1| (bifunctional 6-phosphofructo-2-kinase [Nannochloropsis gaditana])

HSP 1 Score: 226.868 bits (577), Expect = 2.859e-75
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
Query:    1 MLALLSGESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTKALPTDGQDEPINKYEMMTDPQSH 110
            MLALLSGESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTKALPTDGQDEPINKYEMMTDPQSH
Sbjct:    1 MLALLSGESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTKALPTDGQDEPINKYEMMTDPQSH 110          
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|1072224973|gb|OEU09721.1| (putative bifunctional fructose-2,6-bisphosphate 2-phosphatase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 126.331 bits (316), Expect = 9.913e-32
Identity = 62/97 (63.92%), Postives = 74/97 (76.29%), Query Frame = 0
Query:    7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTKALPTDGQDEPINKYEM 103
            GESY+DV  RLEP+  EMER REPLLIVGHQGILRI+YA++MGL R +APYVSIPLN V++L P A+ CHE+R+ L    + L  DGQDEPI    M
Sbjct:  389 GESYMDVTLRLEPLAQEMERIREPLLIVGHQGILRILYAYFMGLDRKEAPYVSIPLNNVIELTPHAYGCHEKRYCLMMKEEML-VDGQDEPITSMPM 484          
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|1210527507|dbj|GAX13792.1| (6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3 [Fistulifera solaris])

HSP 1 Score: 124.79 bits (312), Expect = 2.059e-31
Identity = 59/92 (64.13%), Postives = 73/92 (79.35%), Query Frame = 0
Query:    7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTKALPTDGQDEPI 98
            GESY+DV  RLEP+  EMER REP+LIVGHQGILRI+YA++MGL R +APYVSIPLN V++L P A+ CHE+R+ L    + L  DGQDEP+
Sbjct:  379 GESYMDVTLRLEPLAQEMERTREPVLIVGHQGILRILYAYFMGLDRKEAPYVSIPLNNVIELTPHAYGCHEKRYCLMRREEML-NDGQDEPV 469          
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|219109923|ref|XP_002176714.1| (bifunctional 6-phosphofructo-2-kinase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411249|gb|EEC51177.1| bifunctional 6-phosphofructo-2-kinase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 124.79 bits (312), Expect = 2.890e-31
Identity = 60/100 (60.00%), Postives = 75/100 (75.00%), Query Frame = 0
Query:    7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTKALPTDGQDEPINKYEMMTD 106
            GESY+DV  RLEP+  EMER REP+LIVGHQGILRI+YA++MGL R +APYVSIPLN V++L P A+ CHE+R  L    + L  DGQDEP+    + T+
Sbjct:  412 GESYMDVTLRLEPLAQEMERTREPVLIVGHQGILRILYAYFMGLDRNEAPYVSIPLNNVIELTPHAYGCHEKRFCLMRKEEML-NDGQDEPVTSMPVKTN 510          
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|1210519301|dbj|GAX21885.1| (6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3  [Fistulifera solaris])

HSP 1 Score: 124.79 bits (312), Expect = 3.107e-31
Identity = 59/92 (64.13%), Postives = 73/92 (79.35%), Query Frame = 0
Query:    7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTKALPTDGQDEPI 98
            GESY+DV  RLEP+  EMER REP+LIVGHQGILRI+YA++MGL R +APYVSIPLN V++L P A+ CHE+R+ L    + L  DGQDEP+
Sbjct:  413 GESYMDVTLRLEPLAQEMERTREPVLIVGHQGILRILYAYFMGLDRKEAPYVSIPLNNVIELTPHAYGCHEKRYCLMRREEML-NDGQDEPV 503          
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|676382911|ref|XP_009034734.1| (hypothetical protein AURANDRAFT_2314, partial [Aureococcus anophagefferens] >gi|323454074|gb|EGB09944.1| hypothetical protein AURANDRAFT_2314, partial [Aureococcus anophagefferens])

HSP 1 Score: 113.62 bits (283), Expect = 1.246e-27
Identity = 49/73 (67.12%), Postives = 62/73 (84.93%), Query Frame = 0
Query:    7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEER 79
            GESYLD+I RL+ ++ EMERHREPLLIV HQGILR++YA+ MGL+R +APYVSIPLN V++L+P  + C EER
Sbjct:  346 GESYLDMIHRLDTMVHEMERHREPLLIVAHQGILRLLYAYLMGLSREEAPYVSIPLNTVIRLQPKTYSCDEER 418          
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|1199288364|gb|OUS43505.1| (histidine phosphatase superfamily [Ostreococcus tauri])

HSP 1 Score: 105.531 bits (262), Expect = 2.593e-27
Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 0
Query:    7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTK-ALPTD 92
            GESYLDVIARL+P+I E+E +RE +LIVGHQG+LR+IYA++ GL R +A  +SIPLN V++L P    C EER +L+ PTK A P D
Sbjct:   15 GESYLDVIARLDPLIQELESYREDILIVGHQGVLRLIYAYFAGLDRDEAATLSIPLNTVIKLTPRTHDCIEERFLLHDPTKNAEPID 101          
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|308808987|ref|XP_003081803.1| (protein T6D22.10 (ISS) [Ostreococcus tauri])

HSP 1 Score: 108.612 bits (270), Expect = 2.518e-25
Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 0
Query:    7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTK-ALPTD 92
            GESYLDVIARL+P+I E+E +RE +LIVGHQG+LR+IYA++ GL R +A  +SIPLN V++L P    C EER +L+ PTK A P D
Sbjct:  582 GESYLDVIARLDPLIQELESYREDILIVGHQGVLRLIYAYFAGLDRDEAATLSIPLNTVIKLTPRTHDCIEERFLLHDPTKNAEPID 668          
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|308798563|ref|XP_003074061.1| (Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase (ISS) [Ostreococcus tauri] >gi|116000233|emb|CAL49913.1| 6-phosphofructo-2-kinase [Ostreococcus tauri] >gi|1199287818|gb|OUS42966.1| fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Ostreococcus tauri])

HSP 1 Score: 108.612 bits (270), Expect = 3.067e-25
Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 0
Query:    7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTK-ALPTD 92
            GESYLDVIARL+P+I E+E +RE +LIVGHQG+LR+IYA++ GL R +A  +SIPLN V++L P    C EER +L+ PTK A P D
Sbjct:  560 GESYLDVIARLDPLIQELESYREDILIVGHQGVLRLIYAYFAGLDRDEAATLSIPLNTVIKLTPRTHDCIEERFLLHDPTKNAEPID 646          
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|145341218|ref|XP_001415710.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144575933|gb|ABO94002.1| predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 102.064 bits (253), Expect = 4.092e-23
Identity = 46/81 (56.79%), Postives = 64/81 (79.01%), Query Frame = 0
Query:    7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTK 87
            GESYLDVIARL+P++ E+E +RE +LIVGHQG+LR+IYA++ GL R +A  +SIPLN V++L P    C EER +L+ P++
Sbjct:  416 GESYLDVIARLDPLVQELESYREDVLIVGHQGVLRLIYAYFAGLDRDEAATLSIPLNTVIKLTPRTHDCIEERVLLHDPSE 496          
The following BLAST results are available for this feature:
BLAST of EWM24455.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105912|gb|EWM24455.1|2.859e-75100.00bifunctional 6-phosphofructo-2-kinase [Nannochloro... [more]
gi|1072224973|gb|OEU09721.1|9.913e-3263.92putative bifunctional fructose-2,6-bisphosphate 2-... [more]
gi|1210527507|dbj|GAX13792.1|2.059e-3164.136-phosphofructo-2-kinase / fructose-2,6-biphosphat... [more]
gi|219109923|ref|XP_002176714.1|2.890e-3160.00bifunctional 6-phosphofructo-2-kinase [Phaeodactyl... [more]
gi|1210519301|dbj|GAX21885.1|3.107e-3164.136-phosphofructo-2-kinase / fructose-2,6-biphosphat... [more]
gi|676382911|ref|XP_009034734.1|1.246e-2767.12hypothetical protein AURANDRAFT_2314, partial [Aur... [more]
gi|1199288364|gb|OUS43505.1|2.593e-2759.77histidine phosphatase superfamily [Ostreococcus ta... [more]
gi|308808987|ref|XP_003081803.1|2.518e-2559.77protein T6D22.10 (ISS) [Ostreococcus tauri][more]
gi|308798563|ref|XP_003074061.1|3.067e-2559.77Fructose-6-phosphate 2-kinase/fructose-2,6-biphosp... [more]
gi|145341218|ref|XP_001415710.1|4.092e-2356.79predicted protein [Ostreococcus lucimarinus CCE990... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6233rna6233Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications