EWM24455.1, cds6218 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|585105912|gb|EWM24455.1| (bifunctional 6-phosphofructo-2-kinase [Nannochloropsis gaditana]) HSP 1 Score: 226.868 bits (577), Expect = 2.859e-75 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
Query: 1 MLALLSGESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTKALPTDGQDEPINKYEMMTDPQSH 110
MLALLSGESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTKALPTDGQDEPINKYEMMTDPQSH
Sbjct: 1 MLALLSGESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTKALPTDGQDEPINKYEMMTDPQSH 110
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|1072224973|gb|OEU09721.1| (putative bifunctional fructose-2,6-bisphosphate 2-phosphatase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 126.331 bits (316), Expect = 9.913e-32 Identity = 62/97 (63.92%), Postives = 74/97 (76.29%), Query Frame = 0
Query: 7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTKALPTDGQDEPINKYEM 103
GESY+DV RLEP+ EMER REPLLIVGHQGILRI+YA++MGL R +APYVSIPLN V++L P A+ CHE+R+ L + L DGQDEPI M
Sbjct: 389 GESYMDVTLRLEPLAQEMERIREPLLIVGHQGILRILYAYFMGLDRKEAPYVSIPLNNVIELTPHAYGCHEKRYCLMMKEEML-VDGQDEPITSMPM 484
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|1210527507|dbj|GAX13792.1| (6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3 [Fistulifera solaris]) HSP 1 Score: 124.79 bits (312), Expect = 2.059e-31 Identity = 59/92 (64.13%), Postives = 73/92 (79.35%), Query Frame = 0
Query: 7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTKALPTDGQDEPI 98
GESY+DV RLEP+ EMER REP+LIVGHQGILRI+YA++MGL R +APYVSIPLN V++L P A+ CHE+R+ L + L DGQDEP+
Sbjct: 379 GESYMDVTLRLEPLAQEMERTREPVLIVGHQGILRILYAYFMGLDRKEAPYVSIPLNNVIELTPHAYGCHEKRYCLMRREEML-NDGQDEPV 469
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|219109923|ref|XP_002176714.1| (bifunctional 6-phosphofructo-2-kinase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411249|gb|EEC51177.1| bifunctional 6-phosphofructo-2-kinase [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 124.79 bits (312), Expect = 2.890e-31 Identity = 60/100 (60.00%), Postives = 75/100 (75.00%), Query Frame = 0
Query: 7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTKALPTDGQDEPINKYEMMTD 106
GESY+DV RLEP+ EMER REP+LIVGHQGILRI+YA++MGL R +APYVSIPLN V++L P A+ CHE+R L + L DGQDEP+ + T+
Sbjct: 412 GESYMDVTLRLEPLAQEMERTREPVLIVGHQGILRILYAYFMGLDRNEAPYVSIPLNNVIELTPHAYGCHEKRFCLMRKEEML-NDGQDEPVTSMPVKTN 510
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|1210519301|dbj|GAX21885.1| (6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3 [Fistulifera solaris]) HSP 1 Score: 124.79 bits (312), Expect = 3.107e-31 Identity = 59/92 (64.13%), Postives = 73/92 (79.35%), Query Frame = 0
Query: 7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTKALPTDGQDEPI 98
GESY+DV RLEP+ EMER REP+LIVGHQGILRI+YA++MGL R +APYVSIPLN V++L P A+ CHE+R+ L + L DGQDEP+
Sbjct: 413 GESYMDVTLRLEPLAQEMERTREPVLIVGHQGILRILYAYFMGLDRKEAPYVSIPLNNVIELTPHAYGCHEKRYCLMRREEML-NDGQDEPV 503
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|676382911|ref|XP_009034734.1| (hypothetical protein AURANDRAFT_2314, partial [Aureococcus anophagefferens] >gi|323454074|gb|EGB09944.1| hypothetical protein AURANDRAFT_2314, partial [Aureococcus anophagefferens]) HSP 1 Score: 113.62 bits (283), Expect = 1.246e-27 Identity = 49/73 (67.12%), Postives = 62/73 (84.93%), Query Frame = 0
Query: 7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEER 79
GESYLD+I RL+ ++ EMERHREPLLIV HQGILR++YA+ MGL+R +APYVSIPLN V++L+P + C EER
Sbjct: 346 GESYLDMIHRLDTMVHEMERHREPLLIVAHQGILRLLYAYLMGLSREEAPYVSIPLNTVIRLQPKTYSCDEER 418
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|1199288364|gb|OUS43505.1| (histidine phosphatase superfamily [Ostreococcus tauri]) HSP 1 Score: 105.531 bits (262), Expect = 2.593e-27 Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 0
Query: 7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTK-ALPTD 92
GESYLDVIARL+P+I E+E +RE +LIVGHQG+LR+IYA++ GL R +A +SIPLN V++L P C EER +L+ PTK A P D
Sbjct: 15 GESYLDVIARLDPLIQELESYREDILIVGHQGVLRLIYAYFAGLDRDEAATLSIPLNTVIKLTPRTHDCIEERFLLHDPTKNAEPID 101
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|308808987|ref|XP_003081803.1| (protein T6D22.10 (ISS) [Ostreococcus tauri]) HSP 1 Score: 108.612 bits (270), Expect = 2.518e-25 Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 0
Query: 7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTK-ALPTD 92
GESYLDVIARL+P+I E+E +RE +LIVGHQG+LR+IYA++ GL R +A +SIPLN V++L P C EER +L+ PTK A P D
Sbjct: 582 GESYLDVIARLDPLIQELESYREDILIVGHQGVLRLIYAYFAGLDRDEAATLSIPLNTVIKLTPRTHDCIEERFLLHDPTKNAEPID 668
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|308798563|ref|XP_003074061.1| (Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase (ISS) [Ostreococcus tauri] >gi|116000233|emb|CAL49913.1| 6-phosphofructo-2-kinase [Ostreococcus tauri] >gi|1199287818|gb|OUS42966.1| fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Ostreococcus tauri]) HSP 1 Score: 108.612 bits (270), Expect = 3.067e-25 Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 0
Query: 7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTK-ALPTD 92
GESYLDVIARL+P+I E+E +RE +LIVGHQG+LR+IYA++ GL R +A +SIPLN V++L P C EER +L+ PTK A P D
Sbjct: 560 GESYLDVIARLDPLIQELESYREDILIVGHQGVLRLIYAYFAGLDRDEAATLSIPLNTVIKLTPRTHDCIEERFLLHDPTKNAEPID 646
BLAST of EWM24455.1 vs. NCBI_GenBank
Match: gi|145341218|ref|XP_001415710.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144575933|gb|ABO94002.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 102.064 bits (253), Expect = 4.092e-23 Identity = 46/81 (56.79%), Postives = 64/81 (79.01%), Query Frame = 0
Query: 7 GESYLDVIARLEPIIIEMERHREPLLIVGHQGILRIIYAFYMGLTRAQAPYVSIPLNCVVQLEPSAFHCHEERHILYTPTK 87
GESYLDVIARL+P++ E+E +RE +LIVGHQG+LR+IYA++ GL R +A +SIPLN V++L P C EER +L+ P++
Sbjct: 416 GESYLDVIARLDPLVQELESYREDVLIVGHQGVLRLIYAYFAGLDRDEAATLSIPLNTVIKLTPRTHDCIEERVLLHDPSE 496 The following BLAST results are available for this feature:
BLAST of EWM24455.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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