EWM24460.1, cds6213 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24460.1 vs. NCBI_GenBank
Match: gi|585105926|gb|EWM24460.1| (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 717.998 bits (1852), Expect = 0.000e+0 Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0
Query: 1 MEKERRLQAAMPMLQTVEAWEEARMEGAKEVVEITPRLPRKPTARASEGKMKEKKKDGAGFKDEEGLRQEEEKEGVEAKEVKEEEEEEEEEEEEEEYVPIDAMFRDEVDVTAADGTSMRGYLVSSKMAQKFWRREERPVVLLLADERGWRSVQTRKLADHMSFLSNHVFFVPDLYRGQVFKKGQSKEAWRAAHPPIRLLQDARSAMESLVRNYNATATGIVGFGVGGGQALSAVASGFIKTHAVVAMCPVGYDAPKVAEALKSTPALVIFPGQDNPEAPLQNALTLMDGFASHKALPYMVRVFKDCHLHFLTRPAPNEESAAEDAIMLATSWLEIQLRRGKAKMIRDSRIL 351
MEKERRLQAAMPMLQTVEAWEEARMEGAKEVVEITPRLPRKPTARASEGKMKEKKKDGAGFKDEEGLRQEEEKEGVEAKEVKEEEEEEEEEEEEEEYVPIDAMFRDEVDVTAADGTSMRGYLVSSKMAQKFWRREERPVVLLLADERGWRSVQTRKLADHMSFLSNHVFFVPDLYRGQVFKKGQSKEAWRAAHPPIRLLQDARSAMESLVRNYNATATGIVGFGVGGGQALSAVASGFIKTHAVVAMCPVGYDAPKVAEALKSTPALVIFPGQDNPEAPLQNALTLMDGFASHKALPYMVRVFKDCHLHFLTRPAPNEESAAEDAIMLATSWLEIQLRRGKAKMIRDSRIL
Sbjct: 1 MEKERRLQAAMPMLQTVEAWEEARMEGAKEVVEITPRLPRKPTARASEGKMKEKKKDGAGFKDEEGLRQEEEKEGVEAKEVKEEEEEEEEEEEEEEYVPIDAMFRDEVDVTAADGTSMRGYLVSSKMAQKFWRREERPVVLLLADERGWRSVQTRKLADHMSFLSNHVFFVPDLYRGQVFKKGQSKEAWRAAHPPIRLLQDARSAMESLVRNYNATATGIVGFGVGGGQALSAVASGFIKTHAVVAMCPVGYDAPKVAEALKSTPALVIFPGQDNPEAPLQNALTLMDGFASHKALPYMVRVFKDCHLHFLTRPAPNEESAAEDAIMLATSWLEIQLRRGKAKMIRDSRIL 351
BLAST of EWM24460.1 vs. NCBI_GenBank
Match: gi|553193439|ref|XP_005855775.1| (alpha beta-hydrolase domain-containing protein [Nannochloropsis gaditana CCMP526] >gi|422293279|gb|EKU20579.1| alpha beta-hydrolase domain-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 367.466 bits (942), Expect = 1.533e-125 Identity = 179/197 (90.86%), Postives = 179/197 (90.86%), Query Frame = 0
Query: 103 MFRDEVDVTAADGTSMRGYLVSSKMAQKFWRREERPVVLLLADERGWRSVQTRKLADHMSFLSNHVFFVPDLYRGQVFKKGQSKEAWRAAHPPIRLLQDARSAMESLVRNYNATATGIVGFGVGGGQALSAVASGFIKTHAVVAMCPVGYDAPKVAEALKSTPALVIFPGQDNPEAPLQNALTLMDGFASHKALPYM 299
MFRDEVDVTAADGTSMRGYLVSSKMAQKFWRREERPVVLLLADERGWRSVQTRKLADHMSFLSNHVFFVPDLYRGQVFKKGQSKEAWRAAHPPIRLLQDARSAMESLVRNYNATAT GFIKTHAVVAMCPVGYDAPKVAEALKSTPALVIFPGQDNPEAPLQNALTLMDGFASHKALPYM
Sbjct: 1 MFRDEVDVTAADGTSMRGYLVSSKMAQKFWRREERPVVLLLADERGWRSVQTRKLADHMSFLSNHVFFVPDLYRGQVFKKGQSKEAWRAAHPPIRLLQDARSAMESLVRNYNATAT------------------GFIKTHAVVAMCPVGYDAPKVAEALKSTPALVIFPGQDNPEAPLQNALTLMDGFASHKALPYM 179
BLAST of EWM24460.1 vs. NCBI_GenBank
Match: gi|299470810|emb|CBN78633.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 125.561 bits (314), Expect = 2.725e-28 Identity = 81/249 (32.53%), Postives = 129/249 (51.81%), Query Frame = 0
Query: 101 DAMFRDEVDVTAADGTSMRGYLVSSKMAQKFWR-----REERPVVLLLADERGWRSVQTRKLADHMSFLSNHVFFVPDLYRGQVFKKGQSKEA---WRAAHPPIRLLQDARSAMESLVRNYNATATGIVGFGVGGGQALSAVASGFIKTHAVVAMCPVGYDAPKVAEALKSTPALVIFPGQDN-PEAPLQNALTLMDGFASHKALP-YMVRVFKDCHLHFLTRPAPNEESAAEDAIMLATSWLEIQLRR 339
+ F E + AD Y+VS+K A + W R E VV+LL D G+ TR AD ++ + + + VPD++R + + Q +E WR++H P+ + D R+ ++ + Y AT+ G+VGF GGG+AL A+G +K VV P YD +VA + + P F D P A +++A L + ++ +P + VR+ F RP + AEDA++LATSWLE+ L++
Sbjct: 294 ETTFELEEGLQPADVPRSDAYVVSTKKALRPWDGPHADRAETHVVVLLTDVFGYGDSFTRNAADEIAEVCDAIVVVPDMFRRRPWTHEQPEEEYEDWRSSHDPVAVANDIRACVDFARKEYKATSLGLVGFCYGGGRALEEAAAGVVKPDNVVVFYPTRYDVSEVASRV-TCPVAAFFAEHDVLPGATVEDACALREQLRDNEKVPDFQVRLCPGAGHGFAHRPTEKDTENAEDAMLLATSWLELYLQK 541
BLAST of EWM24460.1 vs. NCBI_GenBank
Match: gi|873236190|emb|CEL99425.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 84.3445 bits (207), Expect = 3.081e-14 Identity = 65/232 (28.02%), Postives = 106/232 (45.69%), Query Frame = 0
Query: 134 REERPVVLLLADERGWRSVQTRKLADHMSFLSNHVFFVPDLYRGQVFKKGQSK---EAWRAAHPPIRLLQDARSAMESLVRNYNATATGIVGFGVGGGQAL--------------SAVASGFI--KTHAVVAMCPVGYDAPKVAEALKSTPALVIFPGQDN-PEAPLQNALTLMDGF-ASHKALPYMVRVFKDCHLHFLTRPAPN-------EESAAEDAIMLATSWLEIQL 337
R+ R VL+L D G+R R++AD ++ + FVPDL+ GQ + + EAWR+ H P R+ +++ L +Y +VGF GGG+AL +AV + VVA P YD + ++ P ++ D P A +A L + F A+ +MV++F + F+ + A + E+ AE A +++TS+LE L
Sbjct: 233 RDPRRAVLMLTDVFGYRDRFMRRVADRLADTLSLPVFVPDLFLGQPWSADRPPAEYEAWRSQHDPDRVDDTIGASLRFLKESYKMDVIAVVGFCYGGGRALETGVRYGGMEEAEGAAVCRNRVDKSVRCVVAFYPTRYDVEAIGRQMR-VPTCCVYAANDTLPGARKADAERLYEAFRANEDLFDFMVQIFDNTTHGFVHQSARDWTNDLQEEDQKAEKAYLISTSFLEFWL 463
BLAST of EWM24460.1 vs. NCBI_GenBank
Match: gi|546316576|ref|XP_005716187.1| (unnamed protein product [Chondrus crispus] >gi|507112700|emb|CDF36368.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 74.7146 bits (182), Expect = 7.294e-12 Identity = 67/241 (27.80%), Postives = 115/241 (47.72%), Query Frame = 0
Query: 106 DEVDVTAADGTSMRGYLVSSKMAQKFWRREERPVVLLLADERGWRSVQTRKLADHMSFLSNHVF--FVPDLYRGQVFKKGQSK---EAWRAAHPPIRLLQDARSAMESLVRNYNATATGIVGFGVGGGQALSAVA--SGFIKTHAVVAMCPVGYDAPKVAEALKSTPALVIFPGQDNPEAPLQNALTLMDGFASHKALP-YMVRVFKDCHLHFLTRPAPNEESA-AEDAIMLATSWLEIQL 337
+E+ + A+DG ++ +LV S+ R R V+L+ D G+ + +TR +A L+ H F VPDL+RG + +G+ K E+WR H P + D A ++L T+ G+VGF GGG+ + VA + + A VA P +D V + L++ G + P+ TL + ++ ++ + V V++ F P+ + A +E A A +WL+ L
Sbjct: 9 EELQLHASDGATVAAFLVRSQP-----HRPSRTAVVLMTDILGYENHETRAVA---MLLAAHGFTTIVPDLFRGNPWVQGRDKSEYESWRRTHDPATVRGDILLARQALTERSLGTSLGLVGFCFGGGRLMEEVALNTSGLNPDAAVAFYPTRFDPEDVGR--NAHCPLLVQTGDRDDLVPVYVVNTLRETLQANASVKEWNVEVYEGFGHAFAHHPSSEADKAQSEVAFARALAWLKRHL 239
BLAST of EWM24460.1 vs. NCBI_GenBank
Match: gi|902229262|gb|KNA21438.1| (hypothetical protein SOVF_043210 [Spinacia oleracea]) HSP 1 Score: 68.5514 bits (166), Expect = 1.255e-9 Identity = 61/209 (29.19%), Postives = 99/209 (47.37%), Query Frame = 0
Query: 140 VLLLADERGWRSVQTRKLADHMSFLSNHVFFVPDLYRGQVFKKGQSK---EAWRAAHPPIRLLQDARSAMESLVRNYNATAT----GIVGFGVGGGQALSAVASGFIKTHAVVAMCPVGYDAPKVAEALKST---PALVIFPGQDNPEAPLQNALTLMDGFASHKALPYMVRVFKDCHLHFLTRPAPNEES-AAEDAIMLATSWLEIQL 337
+LLL+D G+ TR A ++ + + VPDL+RG + K QS+ E W A H PI + +D + + +V + A+ + GI+GF GGG+ L +A K V V + ++ + S P L + +D PL +T+++ + V VFK F+ RP E+ AE+A M+ +WL+ QL
Sbjct: 54 ILLLSDIFGFEDSYTRDFAYRVA-CNGYNVLVPDLFRGDPWSKDQSQAQLEEWLAKHDPITMAKDIEMSTKWMVDEFMASESSKKLGIIGFCYGGGRVLEVLA----KDQGSVFGTGVSFYGTRMDLSTASNVKVPVLFVTGDKD----PLCQ-VTVLNELGNIIGNNSKVVVFKGQGHGFVHRPESLEQDEDAEEAFMIMRNWLQNQL 252
BLAST of EWM24460.1 vs. NCBI_GenBank
Match: gi|1137197756|gb|OMO69398.1| (Dienelactone hydrolase [Corchorus capsularis]) HSP 1 Score: 67.0106 bits (162), Expect = 3.742e-9 Identity = 62/209 (29.67%), Postives = 95/209 (45.45%), Query Frame = 0
Query: 140 VLLLADERGWRSVQTRKLADHMSFLSNHVFFVPDLYRGQVFKKGQSK---EAWRAAHPPIRLLQDARSAMESLVRNYNATA----TGIVGFGVGGGQALSAVA---SGFIKTHAVVAMCPVGYDAPKVAEALKSTPALVIFPGQDNPEAPLQNALTLMDGFASHKALPYMVRVFKDCHLHFLTRP-APNEESAAEDAIMLATSWLEIQL 337
VLLL D G++ TR A ++ +V VPDL+RG + KG+ K E W A+ P R+ +D ++ + +V + A GI+GF GGG+ + +A G T A+ G A + P L I G ++P P +++++ F V +FK F RP +P E+ AE A L +WL L
Sbjct: 55 VLLLTDIFGFQDSATRDFAYQVACHGYNVL-VPDLFRGDPWGKGRPKTMFEQWLASQDPKRVARDIETSTKWMVDEFTAAGLSKKLGIMGFCFGGGRVIDVLAVDEGGCFST----AVSFYGTRMDLSAASKVKVPVLFI-SGDNDPLCP----VSVLNEFEKGIGRGSKVVIFKGRGHAFAHRPGSPEEDVDAEQAFTLMRNWLHDGL 253
BLAST of EWM24460.1 vs. NCBI_GenBank
Match: gi|1109212627|ref|XP_019180771.1| (PREDICTED: carboxymethylenebutenolidase homolog isoform X2 [Ipomoea nil]) HSP 1 Score: 66.2402 bits (160), Expect = 1.017e-8 Identity = 63/239 (26.36%), Postives = 112/239 (46.86%), Query Frame = 0
Query: 108 VDVTAAD-GTSMRGYLVSSKMAQKFWRREERPVVLLLADERGWRSVQTRKLADHMSFLSNHVFFVPDLYRGQVFKKGQ---SKEAWRAAHPPIRLLQDARSAMESLVRNYNATAT----GIVGFGVGGGQALSAVASGFIKTHAVVAMCPVGYDAPKVAEALKS---TPALVIFPGQDNPEAPLQNALTLMDGFASHKALPYMVRVFKDCHLHFLTRP-APNEESAAEDAIMLATSWLE 334
V+++ D G S+ YL+++ + +LLL+D G+ TR A ++ + + VPDL+RG + K + S E W R++QD +++E +V + A G++GF GGG L +A K + + ++ +L + +P L+I G D+P P+ ++++ A +V VFK F+ RP +P E+ AE+A ++ SWL
Sbjct: 52 VELSIGDEGDSIDAYLLTAV------KNNNGTGILLLSDVFGFEDSFTRDFAYRVA-CNGYNVLVPDLFRGDPWGKDRPAASFEQWIGKQDRNRVIQDTFTSVEWMVNEFVAAGISKKLGVIGFCYGGGLTLDILA----KDQGSSFGAGISFYGTRINTSLSTKIKSPLLLI-SGNDDPLCPV----SVLNNVAKDVEKSKVV-VFKGRGHGFVHRPQSPEEDRDAEEAFVIMRSWLN 273
BLAST of EWM24460.1 vs. NCBI_GenBank
Match: gi|1137210271|gb|OMO78867.1| (Dienelactone hydrolase [Corchorus olitorius]) HSP 1 Score: 65.855 bits (159), Expect = 1.838e-8 Identity = 62/209 (29.67%), Postives = 96/209 (45.93%), Query Frame = 0
Query: 140 VLLLADERGWRSVQTRKLADHMSFLSNHVFFVPDLYRGQVFKKGQSK---EAWRAAHPPIRLLQDARSAMESLVRNYNATA----TGIVGFGVGGGQALSAVAS---GFIKTHAVVAMCPVGYDAPKVAEALKSTPALVIFPGQDNPEAPLQNALTLMDGFASHKALPYMVRVFKDCHLHFLTRP-APNEESAAEDAIMLATSWLEIQL 337
VLLL D G++ TR A ++ +V VPDL+RG + KG+ K E W A+ P R+ +D ++ + +V + A GI+GF GGG+ + +A+ G T A+ G A + P L I G ++P P +++++ F V +FK F RP +P E+ AE A L +WL L
Sbjct: 109 VLLLTDIFGFQDSATRDFAYQVACHGYNVL-VPDLFRGDPWGKGRPKTMFEQWLASQDPKRVARDIETSTKWMVDEFTAAGLSKKLGIMGFCFGGGRVIDILAADEGGCFST----AVSFYGTRMDVSAASKVKVPVLFI-SGDNDPLCP----VSVLNEFEKGIGRGSKVVIFKGRGHAFAHRPGSPEEDVDAEQAFTLMRTWLHDGL 307
BLAST of EWM24460.1 vs. NCBI_GenBank
Match: gi|1109212625|ref|XP_019180770.1| (PREDICTED: carboxymethylenebutenolidase homolog isoform X1 [Ipomoea nil]) HSP 1 Score: 65.4698 bits (158), Expect = 2.470e-8 Identity = 70/277 (25.27%), Postives = 120/277 (43.32%), Query Frame = 0
Query: 70 EEEKEGVEAKEVKEEEEEEEEEEEEEEYVPIDAMFRDEVDVTAAD-GTSMRGYLVSSKMAQKFWRREERPVVLLLADERGWRSVQTRKLADHMSFLSNHVFFVPDLYRGQVFKKGQ---SKEAWRAAHPPIRLLQDARSAMESLVRNYNATAT----GIVGFGVGGGQALSAVASGFIKTHAVVAMCPVGYDAPKVAEALKS---TPALVIFPGQDNPEAPLQNALTLMDGFASHKALPYMVRVFKDCHLHFLTRP-APNEESAAEDAIMLATSWLE 334
+ +K V +VK E+E E + V+++ D G S+ YL+++ + +LLL+D G+ TR A ++ + + VPDL+RG + K + S E W R++QD +++E +V + A G++GF GGG L +A K + + ++ +L + +P L+I G D+P P+ + K V VFK F+ RP +P E+ AE+A ++ SWL
Sbjct: 50 KTKKHNVCCCQVKVEDEACE--------------LVNGVELSIGDEGDSIDAYLLTAV------KNNNGTGILLLSDVFGFEDSFTRDFAYRVA-CNGYNVLVPDLFRGDPWGKDRPAASFEQWIGKQDRNRVIQDTFTSVEWMVNEFVAAGISKKLGVIGFCYGGGLTLDILA----KDQGSSFGAGISFYGTRINTSLSTKIKSPLLLI-SGNDDPLCPVSVLNNVAKDVEKSK-----VVVFKGRGHGFVHRPQSPEEDRDAEEAFVIMRSWLN 295 The following BLAST results are available for this feature:
BLAST of EWM24460.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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