EWM24473.1, cds6202 (CDS) Nannochloropsis gaditana

Overview
NameEWM24473.1
Unique Namecds6202
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:871691..871739 -
Alignment locationCM002467.1:871411..871521 -
Alignment locationCM002467.1:871098..871235 -
Alignment locationCM002467.1:870901..871009 -
Alignment locationCM002467.1:870582..870681 -
Alignment locationCM002467.1:870330..870402 -
Alignment locationCM002467.1:870043..870137 -
Alignment locationCM002467.1:869769..869871 -
Alignment locationCM002467.1:869459..869570 -
Alignment locationCM002467.1:869284..869353 -
Alignment locationCM002467.1:868991..869101 -
Alignment locationCM002467.1:868711..868805 -
Alignment locationCM002467.1:868451..868517 -
Alignment locationCM002467.1:868192..868298 -
Alignment locationCM002467.1:867913..867997 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24473.1
ProductPeptidase, FtsH
Orig transcript idgnl|cribi|Naga_100239g8.3871.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:871691..871739 -
CM002467.1supercontigCM002467.1:871411..871521 -
CM002467.1supercontigCM002467.1:871098..871235 -
CM002467.1supercontigCM002467.1:870901..871009 -
CM002467.1supercontigCM002467.1:870582..870681 -
CM002467.1supercontigCM002467.1:870330..870402 -
CM002467.1supercontigCM002467.1:870043..870137 -
CM002467.1supercontigCM002467.1:869769..869871 -
CM002467.1supercontigCM002467.1:869459..869570 -
CM002467.1supercontigCM002467.1:869284..869353 -
CM002467.1supercontigCM002467.1:868991..869101 -
CM002467.1supercontigCM002467.1:868711..868805 -
CM002467.1supercontigCM002467.1:868451..868517 -
CM002467.1supercontigCM002467.1:868192..868298 -
CM002467.1supercontigCM002467.1:867913..867997 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0004222metalloendopeptidase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0019538protein metabolic process
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR003960ATPase_AAA_CS
IPR027417P-loop_NTPase
IPR005936FtsH
IPR000642Peptidase_M41
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
Homology
BLAST of EWM24473.1 vs. NCBI_GenBank
Match: gi|585105943|gb|EWM24473.1| (Peptidase, FtsH [Nannochloropsis gaditana])

HSP 1 Score: 970.689 bits (2508), Expect = 0.000e+0
Identity = 474/474 (100.00%), Postives = 474/474 (100.00%), Query Frame = 0
Query:    1 MEFVEFLKNPRRFTDLGAKIPKGALLCGPPGTGKTLLAKATAGEASVPFYSISGSDFIEMFVGVGPARVRDLFKEARESAPCIVFIDEIDAVGRQRGKGGFSGGNDERENTLNQLLVEMDGFSPSTGVVVLAGTNRVDILDAALTRPGRFDRQIQVDRPDIKGRADIFKVHLKPVKLSTGLEEVANRMAALTPGFTGADIANICNEAAIVAARRNKTSVDLADFETATERIIAGLESHKLISPEEKRIVAYHEAGHAVAGWNLQHADPLLKVTIVPRGSGALGFAQYLPKEVFLRTREQIMDMVCMTLAGRASEEIFFEKVTTGASDDLRKVTQIVYQMIQVYGMNDRIGNLAFPKQEGGFGMEQRAYSETTAQAMDEEAKKLVDEAYTRTLVLLQEKKAQIENIAELLLKKETINHDDIVGAIGPRPFAAHKEYQEFIESIKPAVSADPPSKDAKKEDETKEDASLPPNLTPA 474
            MEFVEFLKNPRRFTDLGAKIPKGALLCGPPGTGKTLLAKATAGEASVPFYSISGSDFIEMFVGVGPARVRDLFKEARESAPCIVFIDEIDAVGRQRGKGGFSGGNDERENTLNQLLVEMDGFSPSTGVVVLAGTNRVDILDAALTRPGRFDRQIQVDRPDIKGRADIFKVHLKPVKLSTGLEEVANRMAALTPGFTGADIANICNEAAIVAARRNKTSVDLADFETATERIIAGLESHKLISPEEKRIVAYHEAGHAVAGWNLQHADPLLKVTIVPRGSGALGFAQYLPKEVFLRTREQIMDMVCMTLAGRASEEIFFEKVTTGASDDLRKVTQIVYQMIQVYGMNDRIGNLAFPKQEGGFGMEQRAYSETTAQAMDEEAKKLVDEAYTRTLVLLQEKKAQIENIAELLLKKETINHDDIVGAIGPRPFAAHKEYQEFIESIKPAVSADPPSKDAKKEDETKEDASLPPNLTPA
Sbjct:    1 MEFVEFLKNPRRFTDLGAKIPKGALLCGPPGTGKTLLAKATAGEASVPFYSISGSDFIEMFVGVGPARVRDLFKEARESAPCIVFIDEIDAVGRQRGKGGFSGGNDERENTLNQLLVEMDGFSPSTGVVVLAGTNRVDILDAALTRPGRFDRQIQVDRPDIKGRADIFKVHLKPVKLSTGLEEVANRMAALTPGFTGADIANICNEAAIVAARRNKTSVDLADFETATERIIAGLESHKLISPEEKRIVAYHEAGHAVAGWNLQHADPLLKVTIVPRGSGALGFAQYLPKEVFLRTREQIMDMVCMTLAGRASEEIFFEKVTTGASDDLRKVTQIVYQMIQVYGMNDRIGNLAFPKQEGGFGMEQRAYSETTAQAMDEEAKKLVDEAYTRTLVLLQEKKAQIENIAELLLKKETINHDDIVGAIGPRPFAAHKEYQEFIESIKPAVSADPPSKDAKKEDETKEDASLPPNLTPA 474          
BLAST of EWM24473.1 vs. NCBI_GenBank
Match: gi|219129252|ref|XP_002184808.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403917|gb|EEC43867.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 699.123 bits (1803), Expect = 0.000e+0
Identity = 336/471 (71.34%), Postives = 394/471 (83.65%), Query Frame = 0
Query:    1 MEFVEFLKNPRRFTDLGAKIPKGALLCGPPGTGKTLLAKATAGEASVPFYSISGSDFIEMFVGVGPARVRDLFKEARESAPCIVFIDEIDAVGRQRGKGGFSGGNDERENTLNQLLVEMDGFSPSTGVVVLAGTNRVDILDAALTRPGRFDRQIQVDRPDIKGRADIFKVHLKPVKLSTGLEEVANRMAALTPGFTGADIANICNEAAIVAARRNKTSVDLADFETATERIIAGLESHKLISPEEKRIVAYHEAGHAVAGWNLQHADPLLKVTIVPRGSGALGFAQYLPKEVFLRTREQIMDMVCMTLAGRASEEIFFEKVTTGASDDLRKVTQIVYQMIQVYGMNDRIGNLAFPKQEGGFGMEQRAYSETTAQAMDEEAKKLVDEAYTRTLVLLQEKKAQIENIAELLLKKETINHDDIVGAIGPRPFAAHKEYQEFIESIKPAVSADPPSKDAKKEDETKEDASLPPNL 471
            MEFV+FL+N  RFT LGAKIPKGALLCGPPGTGKTLLAKA AGE+ VPFYSISGSDFIEMFVGVGP+RVRDLFKEAR +APCIVFIDEIDAVGRQRG+GGFSGGNDERENTLNQLLVEMDGFSP+TGVVVLAGTNR DILD ALTRPGRFDRQI VDRPD++GR +IF+VHL+ +KL   ++E A R+A LTPGF GADIANICNEAAIVAARR   SV + DFETAT+RII GLES+K++S EE+ IVA+HEAGHAVAGW L+HADPLLKVTI+PR SGALGFAQYLP+EVFLR++EQIMD+VCM LAGRA+EE+FF +VTTGASDDLR+VTQ+VY  I+ YGMN R+G L+FP+ +     E+R YS++TA+AMD+EA+ +VDEAY RT+ L+ EKKAQ+E +A LLL+KETI HDD+V  IG RPF     YQE++    P    +P     ++ D T+ D  L P L
Sbjct:  182 MEFVDFLQNSERFTKLGAKIPKGALLCGPPGTGKTLLAKAVAGESGVPFYSISGSDFIEMFVGVGPSRVRDLFKEARANAPCIVFIDEIDAVGRQRGRGGFSGGNDERENTLNQLLVEMDGFSPTTGVVVLAGTNRADILDQALTRPGRFDRQITVDRPDLQGRKEIFEVHLRGIKLEGEVKEYAGRLAGLTPGFAGADIANICNEAAIVAARRKAESVTIVDFETATDRIIGGLESNKIMSTEERSIVAHHEAGHAVAGWFLEHADPLLKVTIIPRTSGALGFAQYLPREVFLRSQEQIMDLVCMALAGRAAEEVFFGRVTTGASDDLRRVTQLVYSTIKDYGMNSRVGQLSFPRDDNAGPGEKR-YSDSTAEAMDDEARAIVDEAYQRTVDLMTEKKAQVEMVANLLLEKETITHDDLVDLIGARPFQGDSAYQEYVSGRGPMKKKEP----QEEIDNTELDGVLTPGL 647          
BLAST of EWM24473.1 vs. NCBI_GenBank
Match: gi|669155798|ref|XP_008613461.1| (AFG3 family protein [Saprolegnia diclina VS20] >gi|530735096|gb|EQC33338.1| AFG3 family protein [Saprolegnia diclina VS20])

HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0
Identity = 319/441 (72.34%), Postives = 370/441 (83.90%), Query Frame = 0
Query:    1 MEFVEFLKNPRRFTDLGAKIPKGALLCGPPGTGKTLLAKATAGEASVPFYSISGSDFIEMFVGVGPARVRDLFKEARESAPCIVFIDEIDAVGRQRGKGGFSGGNDERENTLNQLLVEMDGFSPSTGVVVLAGTNRVDILDAALTRPGRFDRQIQVDRPDIKGRADIFKVHLKPVKLSTGLEEVANRMAALTPGFTGADIANICNEAAIVAARRNKTSVDLADFETATERIIAGLESHKLISPEEKRIVAYHEAGHAVAGWNLQHADPLLKVTIVPRGSGALGFAQYLPKEVFLRTREQIMDMVCMTLAGRASEEIFFE-KVTTGASDDLRKVTQIVYQMIQVYGMNDRIGNLAFPKQEGGFGMEQRAYSETTAQAMDEEAKKLVDEAYTRTLVLLQEKKAQIENIAELLLKKETINHDDIVGAIGPRPFAAHKEYQEFIE 440
            MEFVEFLKN ++FTDLGAKIPKGALL GPPGTGKT+LAKATAGEASVPFYSISGSDFIEMFVGVGP+RVRDLFKEAR +APCIVFIDEIDAV R R  G F GGNDERENTLNQLLVEMDGF+ S GVVVLAGTNRVDILD A+ RPGRFDRQI VD+PDIKGR  IF VHL+ + L   +E+ A RMAALTPGF+GADIANICNEAAIVAARRN  S+   DFE AT+R+I GLE+++L+SPEEK+ VAYHEAGHAV GW L+HADPLLKVTIVPRG G+LG+AQYLPKEV L ++E I D++CM L GRASE + F+ ++TTGASDDLR+VTQ+ Y M+Q+YGMNDRIG L+FPK + G G   R YSE TA+AMDEEAKK+VD+ Y RT+ LL++KK  +  ++E LL+ ETINH DIV  +GPRPF  +K Y EF+E
Sbjct:  361 MEFVEFLKNQKKFTDLGAKIPKGALLVGPPGTGKTMLAKATAGEASVPFYSISGSDFIEMFVGVGPSRVRDLFKEARANAPCIVFIDEIDAVARARSSGKFGGGNDERENTLNQLLVEMDGFNSSEGVVVLAGTNRVDILDKAILRPGRFDRQITVDKPDIKGRRAIFSVHLQSLHLDGTVEDFARRMAALTPGFSGADIANICNEAAIVAARRNGDSITFKDFEQATDRVIGGLETNRLMSPEEKKTVAYHEAGHAVTGWFLEHADPLLKVTIVPRGKGSLGYAQYLPKEVSLHSKEAIEDIMCMALGGRASEHVNFDGRITTGASDDLRRVTQMAYSMVQLYGMNDRIGQLSFPKDDNG-GYPDRMYSEKTAEAMDEEAKKIVDKMYARTISLLEDKKDLLHKLSEELLENETINHGDIVRVLGPRPFGGNKTYTEFVE 800          
BLAST of EWM24473.1 vs. NCBI_GenBank
Match: gi|298711540|emb|CBJ26628.1| (m-AAA protease subunit, Afg3/Yta10-like protein [Ectocarpus siliculosus])

HSP 1 Score: 667.922 bits (1722), Expect = 0.000e+0
Identity = 323/444 (72.75%), Postives = 369/444 (83.11%), Query Frame = 0
Query:   12 RFTDLGAKIPKGALLCGPPGTGKTLLAKATAGEASVPFYSISGSDFIEMFVGVGPARVRDLFKEARESAPCIVFIDEIDAVGRQRGKGGFSGGNDERENTLNQLLVEMDGFSPSTGVVVLAGTNRVDILDAALTRPGRFDRQIQVDRPDIKGRADIFKVHLKPVKLSTGLEEVANRMAALTPGFTGADIANICNEAAIVAARRNKTSVDLADFETATERIIAGLESHKLISPEEKRIVAYHEAGHAVAGWNLQHADPLLKVTIVPRGSGALGFAQYLPKEVFLRTREQIMDMVCMTLAGRASEEIFFEKVTTGASDDLRKVTQIVYQMIQVYGMNDRIGNLAFPKQEGGFGMEQ-RAYSETTAQAMDEEAKKLVDEAYTRTLVLLQEKKAQIENIAELLLKKETINHDDIVGAIGPRPFAAHKEYQEFIESIKPAVSADPPSKD 454
            RF +LGAK PKG LL GPPG GKTLLAKATAGEA VPF+++SGSDFIEMFVGVGP RVRDLFKEAR++APCIVFIDEIDAVGR+RGKG F GGNDERENTLNQLLVEMDGFS +T VVVLAGTNRVD+LD ALTRPGRFDRQI VD+PDI GR  IF+VHLK + L     E + R+A LTPGF GADI N+CNEAAIVAARR+K  +++ DFE+AT+R+I GLES+KLI PEEKRIVAYHEAGHAVAGWNL+HADPL+KVTIVPRGS  LG+AQYLPKEVFLRTREQI D++CM LAGRASE++ F  VTTGASDDLR+VT +VYQMI VYGM D IG LAFP++ GG G  Q R YS+ TA+ MD EA+K+VD AY RTL L++ KK QI+ +AELLL+KETINHDD+V  IG RPF AHK Y EFI + + A      SKD
Sbjct:  442 RFINLGAKFPKGGLLWGPPGKGKTLLAKATAGEAKVPFFTVSGSDFIEMFVGVGPGRVRDLFKEARKNAPCIVFIDEIDAVGRKRGKGQFGGGNDERENTLNQLLVEMDGFSSNTNVVVLAGTNRVDVLDPALTRPGRFDRQITVDKPDIMGRKAIFEVHLKGLNLGGKSSEFSGRLAGLTPGFVGADIENLCNEAAIVAARRDKKKIEMDDFESATDRVIGGLESNKLIMPEEKRIVAYHEAGHAVAGWNLEHADPLMKVTIVPRGSSTLGYAQYLPKEVFLRTREQITDIICMALAGRASEQVHFGDVTTGASDDLRRVTAMVYQMIGVYGMGDGIGQLAFPQENGGGGFPQERPYSDATAEKMDLEARKMVDSAYQRTLELVEAKKEQIKLVAELLLEKETINHDDLVSLIGARPFKAHKSYLEFISANEDAKQKMADSKD 885          
BLAST of EWM24473.1 vs. NCBI_GenBank
Match: gi|1173940314|gb|OQR89771.1| (cell division protease ftsH [Thraustotheca clavata])

HSP 1 Score: 667.152 bits (1720), Expect = 0.000e+0
Identity = 322/464 (69.40%), Postives = 373/464 (80.39%), Query Frame = 0
Query:    1 MEFVEFLKNPRRFTDLGAKIPKGALLCGPPGTGKTLLAKATAGEASVPFYSISGSDFIEMFVGVGPARVRDLFKEARESAPCIVFIDEIDAVGRQRGKGGFSGGNDERENTLNQLLVEMDGFSPSTGVVVLAGTNRVDILDAALTRPGRFDRQIQVDRPDIKGRADIFKVHLKPVKLSTGLEEVANRMAALTPGFTGADIANICNEAAIVAARRNKTSVDLADFETATERIIAGLESHKLISPEEKRIVAYHEAGHAVAGWNLQHADPLLKVTIVPRGSGALGFAQYLPKEVFLRTREQIMDMVCMTLAGRASEEIFFE-KVTTGASDDLRKVTQIVYQMIQVYGMNDRIGNLAFPKQEGGFGMEQRAYSETTAQAMDEEAKKLVDEAYTRTLVLLQEKKAQIENIAELLLKKETINHDDIVGAIGPRPFAAHKEYQEFIESIKPAVSADPPSKDAKKEDETKE 463
            MEFVEFLKN ++FTDLGAKIPKGALL GPPGTGKT+LAKATAGEASVPF+SISGSDFIEMFVGVGP+RVRDLFKEAR +APCIVFIDEIDAV R R  G F GGNDERENTLNQLLVEMDGF+ S GVVVLAGTNR DILD A+ RPGRFDRQI VD+PDIKGR  IF VHLK + L   +E+ A RMAALTPGF+GADIANICNEAAIVAARRN  S+   DFE AT+R+I GLE+++L+SPEEK+ VAYHEAGHAVAGW L+HADPLLKVTIVPRG G+LG+AQYLPKEV L ++E I D++CM L GRASE + F  ++TTGASDDLR+VT + Y M+Q+YGMNDRIG L+FPK + G G   R YSE TA+AMDEEAKK+VD+ Y RT+ LL+E +  +  ++E LL+ ETINH DIV  +GPRPF  +K Y EF+E            K   KE E K+
Sbjct:  324 MEFVEFLKNQKKFTDLGAKIPKGALLVGPPGTGKTMLAKATAGEASVPFFSISGSDFIEMFVGVGPSRVRDLFKEARANAPCIVFIDEIDAVARARSNGKFGGGNDERENTLNQLLVEMDGFNSSEGVVVLAGTNRADILDKAILRPGRFDRQITVDKPDIKGRRAIFTVHLKSLHLDGTVEDFARRMAALTPGFSGADIANICNEAAIVAARRNGDSITFKDFEQATDRVIGGLETNRLMSPEEKKTVAYHEAGHAVAGWFLEHADPLLKVTIVPRGKGSLGYAQYLPKEVSLHSKEAIEDIMCMALGGRASEYVNFNGRITTGASDDLRRVTDMAYSMVQLYGMNDRIGQLSFPKDDNG-GYPDRKYSEKTAEAMDEEAKKIVDKMYARTIALLKENQDALHKLSEELLENETINHGDIVRVLGPRPFGGNKTYTEFVEESWANADQHEKKKQEAKEAEIKQ 786          
BLAST of EWM24473.1 vs. NCBI_GenBank
Match: gi|301107181|ref|XP_002902673.1| (cell division protease ftsH [Phytophthora infestans T30-4] >gi|262098547|gb|EEY56599.1| cell division protease ftsH [Phytophthora infestans T30-4])

HSP 1 Score: 667.152 bits (1720), Expect = 0.000e+0
Identity = 325/480 (67.71%), Postives = 384/480 (80.00%), Query Frame = 0
Query:    1 MEFVEFLKNPRRFTDLGAKIPKGALLCGPPGTGKTLLAKATAGEASVPFYSISGSDFIEMFVGVGPARVRDLFKEARESAPCIVFIDEIDAVGRQRGKGGFSGGNDERENTLNQLLVEMDGFSPSTGVVVLAGTNRVDILDAALTRPGRFDRQIQVDRPDIKGRADIFKVHLKPVKLSTGLEEVANRMAALTPGFTGADIANICNEAAIVAARRNKTSVDLADFETATERIIAGLESHKLISPEEKRIVAYHEAGHAVAGWNLQHADPLLKVTIVPRGSGALGFAQYLPKEVFLRTREQIMDMVCMTLAGRASEEIFFE-KVTTGASDDLRKVTQIVYQMIQVYGMNDRIGNLAFPKQEGGFGMEQRAYSETTAQAMDEEAKKLVDEAYTRTLVLLQEKKAQIENIAELLLKKETINHDDIVGAIGPRPFAAHKEYQEFIE------------SIKPAVSADPPSKDA---KKEDETKED 464
            MEFV+FL+N +RFTDLGAKIPKGALL GPPGTGKTLLAKATAGEASVPF+SISGSDFIEMFVGVGP+RVRDLFKEAR +APCIVFIDEIDAV R R KG FSGGNDERENTLNQLLVEMDGF+ S GVVVLAGTNR DILD A+ RPGRFDRQI VD PDIKGR +IFKVHL+ + L   +++ A RMAALTPGF GA+IANICNEAAIVAARRN T +   DFE AT+R+I GLE+++++SPEEK+ VAYHEAGHAVAGW L+HADPLLKVTIVPRG G+LG+AQYLPKEV L +RE + DM+CM L GRASE + F+ ++TTGASDDLR+VTQI Y M+Q+YGMNDR+G L+FP++EGG+    + YS+ T++ MDEE +K+V  AY RT  LL E++ Q+  +AE LL+ ETINH DIV  +GPRPF  +K Y EF+E              K A  A P +KD+     EDE K+D
Sbjct:  396 MEFVDFLRNQKRFTDLGAKIPKGALLVGPPGTGKTLLAKATAGEASVPFFSISGSDFIEMFVGVGPSRVRDLFKEARANAPCIVFIDEIDAVARARSKGNFSGGNDERENTLNQLLVEMDGFNSSEGVVVLAGTNRADILDKAILRPGRFDRQITVDVPDIKGRREIFKVHLQGLTLDGKVDDFARRMAALTPGFAGAEIANICNEAAIVAARRNGTKISFKDFEQATDRVIGGLETNRIMSPEEKKTVAYHEAGHAVAGWFLEHADPLLKVTIVPRGKGSLGYAQYLPKEVALHSREALTDMMCMALGGRASEFVNFDGRITTGASDDLRRVTQIAYSMVQLYGMNDRVGQLSFPREEGGY--PDKLYSDKTSEVMDEEVQKIVHNAYERTKELLMERQTQLHELAEELLQNETINHGDIVRVLGPRPFGGNKTYTEFVEESWKDADQYEADKAKAAPEATPEAKDSDTESSEDEAKDD 873          
BLAST of EWM24473.1 vs. NCBI_GenBank
Match: gi|1173945477|gb|OQR94097.1| (cell division protease ftsH [Achlya hypogyna])

HSP 1 Score: 665.996 bits (1717), Expect = 0.000e+0
Identity = 323/464 (69.61%), Postives = 375/464 (80.82%), Query Frame = 0
Query:    1 MEFVEFLKNPRRFTDLGAKIPKGALLCGPPGTGKTLLAKATAGEASVPFYSISGSDFIEMFVGVGPARVRDLFKEARESAPCIVFIDEIDAVGRQRGKGGFSGGNDERENTLNQLLVEMDGFSPSTGVVVLAGTNRVDILDAALTRPGRFDRQIQVDRPDIKGRADIFKVHLKPVKLSTGLEEVANRMAALTPGFTGADIANICNEAAIVAARRNKTSVDLADFETATERIIAGLESHKLISPEEKRIVAYHEAGHAVAGWNLQHADPLLKVTIVPRGSGALGFAQYLPKEVFLRTREQIMDMVCMTLAGRASEEIFFE-KVTTGASDDLRKVTQIVYQMIQVYGMNDRIGNLAFPKQEGGFGMEQRAYSETTAQAMDEEAKKLVDEAYTRTLVLLQEKKAQIENIAELLLKKETINHDDIVGAIGPRPFAAHKEYQEFIESIKPAVSADPPSKDAKKEDETKE 463
            MEFVEFLKN ++FTDLGAKIPKGALL GPPGTGKT+LAKATAGEASVPF+SISGSDFIEMFVGVGP+RVRDLFKEAR +APCIVFIDEIDAV R R  G F GGNDERENTLNQLLVEMDGF+ S GVVVLAGTNRVDILD A+ RPGRFDRQI VD+PDIKGR  IF VHLK + L    E+ A RMAALTPGF+GADIANICNEAAIVAARRN  S+   DFE AT+R+I GLE+++L+SPEEK+ VAYHEAGHAV GW L+HADPLLKVTIVPRG G+LG+AQYLPKEV L ++E I D++CM L GRASE + F+ +VTTGASDDLR+VTQ+ Y M+Q+YGMN+RIG L+FPK + G G   R YSE TA+AMDEEAKK+VD+ Y RT+ LL++K+  +  ++E LL+ ETINH DIV  +GPRPF  +K Y EF+E            K A  + E KE
Sbjct:  347 MEFVEFLKNQKKFTDLGAKIPKGALLVGPPGTGKTMLAKATAGEASVPFFSISGSDFIEMFVGVGPSRVRDLFKEARANAPCIVFIDEIDAVARARSNGKFGGGNDERENTLNQLLVEMDGFNSSEGVVVLAGTNRVDILDKAILRPGRFDRQITVDKPDIKGRRAIFAVHLKSLHLDGTTEDFARRMAALTPGFSGADIANICNEAAIVAARRNGDSITFKDFEQATDRVIGGLETNRLMSPEEKKTVAYHEAGHAVTGWFLEHADPLLKVTIVPRGKGSLGYAQYLPKEVSLHSKEAIEDIMCMALGGRASEYVNFDGRVTTGASDDLRRVTQMAYSMVQLYGMNERIGQLSFPKDDNG-GYPDRMYSEKTAEAMDEEAKKIVDKMYARTIALLEDKRELLHKLSEELLENETINHGDIVRVLGPRPFGGNKTYTEFVEESWANADMHEKQKQAAADAEIKE 809          
BLAST of EWM24473.1 vs. NCBI_GenBank
Match: gi|695406803|ref|XP_009524207.1| (hypothetical protein PHYSODRAFT_494111 [Phytophthora sojae] >gi|348681674|gb|EGZ21490.1| hypothetical protein PHYSODRAFT_494111 [Phytophthora sojae])

HSP 1 Score: 660.603 bits (1703), Expect = 0.000e+0
Identity = 319/474 (67.30%), Postives = 380/474 (80.17%), Query Frame = 0
Query:    1 MEFVEFLKNPRRFTDLGAKIPKGALLCGPPGTGKTLLAKATAGEASVPFYSISGSDFIEMFVGVGPARVRDLFKEARESAPCIVFIDEIDAVGRQRGKGGFSGGNDERENTLNQLLVEMDGFSPSTGVVVLAGTNRVDILDAALTRPGRFDRQIQVDRPDIKGRADIFKVHLKPVKLSTGLEEVANRMAALTPGFTGADIANICNEAAIVAARRNKTSVDLADFETATERIIAGLESHKLISPEEKRIVAYHEAGHAVAGWNLQHADPLLKVTIVPRGSGALGFAQYLPKEVFLRTREQIMDMVCMTLAGRASEEIFFE-KVTTGASDDLRKVTQIVYQMIQVYGMNDRIGNLAFPKQEGGFGMEQRAYSETTAQAMDEEAKKLVDEAYTRTLVLLQEKKAQIENIAELLLKKETINHDDIVGAIGPRPFAAHKEYQEFIESIKPAVSADPPSKDAKKEDETKEDASLPPNLTP 473
            MEFV+FL+N +RFT+LGAKIPKGALL GPPGTGKTLLAKATAGEASVPF+SISGSDFIEMFVGVGP+RVRDLFKEAR +APCIVFIDEIDAV R R KG FSGGNDERENTLNQLLVEMDGF+ S GVVVLAGTNR DILD A+ RPGRFDRQI VD PDIKGR +IFKVHL+ + L   +++ A RMAALTPGF GA+IANICNEAAIVAARRN +S+   DFE AT+R+I GLE+++++SPEEK+ VAYHEAGHAVAGW L+HADPLLKVTIVPRG G+LG+AQYLPKEV L +RE + DM+CM L GRASE + F+ ++TTGASDDLR+VTQI Y M+Q+YGMNDR+G L+FPK+EG +    + YS+ T++ MDEE +K+V  AY RT  LL +K+ Q+  +AE LL+ ETINH DIV  +GPRPF  +K Y EF+E            +  K  D+ + D +  P  TP
Sbjct:  402 MEFVDFLRNQKRFTELGAKIPKGALLVGPPGTGKTLLAKATAGEASVPFFSISGSDFIEMFVGVGPSRVRDLFKEARANAPCIVFIDEIDAVARARSKGNFSGGNDERENTLNQLLVEMDGFNSSEGVVVLAGTNRADILDKAILRPGRFDRQITVDVPDIKGRREIFKVHLQGLTLDGNVDDFARRMAALTPGFAGAEIANICNEAAIVAARRNGSSISFKDFEQATDRVIGGLETNRIMSPEEKKTVAYHEAGHAVAGWFLEHADPLLKVTIVPRGKGSLGYAQYLPKEVALHSREALTDMMCMALGGRASEHVNFDGRITTGASDDLRRVTQIAYSMVQLYGMNDRVGQLSFPKEEGAY--PDKLYSDKTSEIMDEEVQKIVHNAYERTKHLLMDKQNQLHELAEELLQNETINHSDIVRVLGPRPFGGNKTYIEFVE------------ESWKDADKYEADKAKAPEATP 861          
BLAST of EWM24473.1 vs. NCBI_GenBank
Match: gi|970647161|gb|KUF87074.1| (hypothetical protein AM588_10001376 [Phytophthora nicotianae])

HSP 1 Score: 659.448 bits (1700), Expect = 0.000e+0
Identity = 320/474 (67.51%), Postives = 381/474 (80.38%), Query Frame = 0
Query:    1 MEFVEFLKNPRRFTDLGAKIPKGALLCGPPGTGKTLLAKATAGEASVPFYSISGSDFIEMFVGVGPARVRDLFKEARESAPCIVFIDEIDAVGRQRGKGGFSGGNDERENTLNQLLVEMDGFSPSTGVVVLAGTNRVDILDAALTRPGRFDRQIQVDRPDIKGRADIFKVHLKPVKLSTGLEEVANRMAALTPGFTGADIANICNEAAIVAARRNKTSVDLADFETATERIIAGLESHKLISPEEKRIVAYHEAGHAVAGWNLQHADPLLKVTIVPRGSGALGFAQYLPKEVFLRTREQIMDMVCMTLAGRASEEIFFE-KVTTGASDDLRKVTQIVYQMIQVYGMNDRIGNLAFPKQEGGFGMEQRAYSETTAQAMDEEAKKLVDEAYTRTLVLLQEKKAQIENIAELLLKKETINHDDIVGAIGPRPFAAHKEYQEFIESIKPAVSADPPSKDAKKEDETKEDASLPPNLTP 473
            MEFV+FL+N +RFT+LGAKIPKGALL GPPGTGKTLLAKATAGEASVPF+SISGSDFIEMFVGVGP+RVRDLFKEAR +APCIVFIDEIDAV R R KG FSGGNDERENTLNQLLVEMDGF+ S GVVVLAGTNR DILD A+ RPGRFDRQI VD PDIKGR +IFKVHL+ + L   +++ A RMAALTPGF GA+IANICNEAAIVAARRN T++   DFE AT+R+I GLE+++++SPEEK+ VAYHEAGHAVAGW L+HADPLLKVTIVPRG G+LG+AQYLPKEV L +RE + DM+CM L GRASE + F+ ++TTGASDDLR+VTQI Y M+Q+YGMNDR+G L+FP++EG +    + YS+ T++ MDEE +K+V  AY RT  LL +K+ Q+  +AE LL+ ETINH DIV  +GPRPF  +K Y EF+E            KDA   D+ + D +  P  TP
Sbjct:   91 MEFVDFLRNQKRFTELGAKIPKGALLVGPPGTGKTLLAKATAGEASVPFFSISGSDFIEMFVGVGPSRVRDLFKEARANAPCIVFIDEIDAVARARSKGNFSGGNDERENTLNQLLVEMDGFNSSEGVVVLAGTNRADILDKAILRPGRFDRQITVDVPDIKGRREIFKVHLQGLTLDGNVDDFARRMAALTPGFAGAEIANICNEAAIVAARRNGTNISFKDFEQATDRVIGGLETNRIMSPEEKKTVAYHEAGHAVAGWFLEHADPLLKVTIVPRGKGSLGYAQYLPKEVALHSREALTDMMCMALGGRASEFVNFDGRITTGASDDLRRVTQIAYSMVQLYGMNDRVGQLSFPREEGAY--PDKLYSDKTSEIMDEEVQKIVHNAYERTKQLLMDKQTQLHELAEELLQNETINHGDIVRVLGPRPFGGNKTYTEFVEE---------SWKDA---DQYEADKAKAPETTP 550          
BLAST of EWM24473.1 vs. NCBI_GenBank
Match: gi|970642001|gb|KUF83833.1| (ATP-dependent zinc metalloprotease FTSH 8 [Phytophthora nicotianae])

HSP 1 Score: 659.448 bits (1700), Expect = 0.000e+0
Identity = 318/474 (67.09%), Postives = 380/474 (80.17%), Query Frame = 0
Query:    1 MEFVEFLKNPRRFTDLGAKIPKGALLCGPPGTGKTLLAKATAGEASVPFYSISGSDFIEMFVGVGPARVRDLFKEARESAPCIVFIDEIDAVGRQRGKGGFSGGNDERENTLNQLLVEMDGFSPSTGVVVLAGTNRVDILDAALTRPGRFDRQIQVDRPDIKGRADIFKVHLKPVKLSTGLEEVANRMAALTPGFTGADIANICNEAAIVAARRNKTSVDLADFETATERIIAGLESHKLISPEEKRIVAYHEAGHAVAGWNLQHADPLLKVTIVPRGSGALGFAQYLPKEVFLRTREQIMDMVCMTLAGRASEEIFFE-KVTTGASDDLRKVTQIVYQMIQVYGMNDRIGNLAFPKQEGGFGMEQRAYSETTAQAMDEEAKKLVDEAYTRTLVLLQEKKAQIENIAELLLKKETINHDDIVGAIGPRPFAAHKEYQEFIESIKPAVSADPPSKDAKKEDETKEDASLPPNLTP 473
            MEFV+FL+N +RFT+LGAKIPKGALL GPPGTGKTLLAKATAGEASVPF+SISGSDFIEMFVGVGP+RVRDLFKEAR +APCIVFIDEIDAV R R KG FSGGNDERENTLNQLLVEMDGF+ S GVVVLAGTNR DILD A+ RPGRFDRQI VD PDIKGR +IFKVHL+ + L   +++ A RMAALTPGF GA+IANICNEAAIVAARRN T++   DFE AT+R+I GLE+++++SPEEK+ VAYHEAGHAVAGW L+HADPLLKVTIVPRG G+LG+AQYLPKEV L +RE + DM+CM L GRASE + F+ ++TTGASDDLR+VTQI Y M+Q+YGMNDR+G L+FP++EG +    + YS+ T++ MDEE +K+V  AY RT  LL +K+ Q+  +AE LL+ ETINH DIV  +GPRPF  +K Y EF+E            +  K  D+ + D +  P  TP
Sbjct:  396 MEFVDFLRNQKRFTELGAKIPKGALLVGPPGTGKTLLAKATAGEASVPFFSISGSDFIEMFVGVGPSRVRDLFKEARANAPCIVFIDEIDAVARARSKGNFSGGNDERENTLNQLLVEMDGFNSSEGVVVLAGTNRADILDKAILRPGRFDRQITVDVPDIKGRREIFKVHLQGLTLDGNVDDFARRMAALTPGFAGAEIANICNEAAIVAARRNGTNISFKDFEQATDRVIGGLETNRIMSPEEKKTVAYHEAGHAVAGWFLEHADPLLKVTIVPRGKGSLGYAQYLPKEVALHSREALTDMMCMALGGRASEFVNFDGRITTGASDDLRRVTQIAYSMVQLYGMNDRVGQLSFPREEGAY--PDKLYSDKTSEIMDEEVQKIVHNAYERTKQLLMDKQTQLHELAEELLQNETINHGDIVRVLGPRPFGGNKTYTEFVE------------ESWKDADQYEADKAKAPETTP 855          
The following BLAST results are available for this feature:
BLAST of EWM24473.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105943|gb|EWM24473.1|0.000e+0100.00Peptidase, FtsH [Nannochloropsis gaditana][more]
gi|219129252|ref|XP_002184808.1|0.000e+071.34predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|669155798|ref|XP_008613461.1|0.000e+072.34AFG3 family protein [Saprolegnia diclina VS20] >gi... [more]
gi|298711540|emb|CBJ26628.1|0.000e+072.75m-AAA protease subunit, Afg3/Yta10-like protein [E... [more]
gi|1173940314|gb|OQR89771.1|0.000e+069.40cell division protease ftsH [Thraustotheca clavata... [more]
gi|301107181|ref|XP_002902673.1|0.000e+067.71cell division protease ftsH [Phytophthora infestan... [more]
gi|1173945477|gb|OQR94097.1|0.000e+069.61cell division protease ftsH [Achlya hypogyna][more]
gi|695406803|ref|XP_009524207.1|0.000e+067.30hypothetical protein PHYSODRAFT_494111 [Phytophtho... [more]
gi|970647161|gb|KUF87074.1|0.000e+067.51hypothetical protein AM588_10001376 [Phytophthora ... [more]
gi|970642001|gb|KUF83833.1|0.000e+067.09ATP-dependent zinc metalloprotease FTSH 8 [Phytoph... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6217rna6217Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications