EWM24477.1, cds6199 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24477.1 vs. NCBI_GenBank
Match: gi|585105947|gb|EWM24477.1| (Mitochondrial carrier domain protein [Nannochloropsis gaditana]) HSP 1 Score: 536.569 bits (1381), Expect = 0.000e+0 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
Query: 1 MTHNEKRQHWLKEGAIGLGTGVLYGVTSVAVGHPFDTIKTKMQAQEGFIKGPGMVRSFSTVLKTQGLPGLYKGALPPLLGSGVYRSTQFAVFEALYTKWDNEVGREEIPHTQGVQVRVVGAAVAAATARSLLECPIEFAKVARQTGQDWKLGQVYRGFGLQLGRTGGVMTTYFVTVDAIRRHHPSVFETKIGQFLASAGAATFGFWVVWPLEVLKNQVTGPLRLFSSPLSSWQSLFLVLFSSFSPVHFYRIFLRCTRSSVLFFG 264
MTHNEKRQHWLKEGAIGLGTGVLYGVTSVAVGHPFDTIKTKMQAQEGFIKGPGMVRSFSTVLKTQGLPGLYKGALPPLLGSGVYRSTQFAVFEALYTKWDNEVGREEIPHTQGVQVRVVGAAVAAATARSLLECPIEFAKVARQTGQDWKLGQVYRGFGLQLGRTGGVMTTYFVTVDAIRRHHPSVFETKIGQFLASAGAATFGFWVVWPLEVLKNQVTGPLRLFSSPLSSWQSLFLVLFSSFSPVHFYRIFLRCTRSSVLFFG
Sbjct: 1 MTHNEKRQHWLKEGAIGLGTGVLYGVTSVAVGHPFDTIKTKMQAQEGFIKGPGMVRSFSTVLKTQGLPGLYKGALPPLLGSGVYRSTQFAVFEALYTKWDNEVGREEIPHTQGVQVRVVGAAVAAATARSLLECPIEFAKVARQTGQDWKLGQVYRGFGLQLGRTGGVMTTYFVTVDAIRRHHPSVFETKIGQFLASAGAATFGFWVVWPLEVLKNQVTGPLRLFSSPLSSWQSLFLVLFSSFSPVHFYRIFLRCTRSSVLFFG 264
BLAST of EWM24477.1 vs. NCBI_GenBank
Match: gi|553184811|ref|XP_005854150.1| (hypothetical protein NGA_0198700 [Nannochloropsis gaditana CCMP526] >gi|422294912|gb|EKU22212.1| hypothetical protein NGA_0198700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 444.121 bits (1141), Expect = 2.649e-156 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
Query: 1 MTHNEKRQHWLKEGAIGLGTGVLYGVTSVAVGHPFDTIKTKMQAQEGFIKGPGMVRSFSTVLKTQGLPGLYKGALPPLLGSGVYRSTQFAVFEALYTKWDNEVGREEIPHTQGVQVRVVGAAVAAATARSLLECPIEFAKVARQTGQDWKLGQVYRGFGLQLGRTGGVMTTYFVTVDAIRRHHPSVFETKIGQFLASAGAATFGFWVVWPLEVLKNQV 218
MTHNEKRQHWLKEGAIGLGTGVLYGVTSVAVGHPFDTIKTKMQAQEGFIKGPGMVRSFSTVLKTQGLPGLYKGALPPLLGSGVYRSTQFAVFEALYTKWDNEVGREEIPHTQGVQVRVVGAAVAAATARSLLECPIEFAKVARQTGQDWKLGQVYRGFGLQLGRTGGVMTTYFVTVDAIRRHHPSVFETKIGQFLASAGAATFGFWVVWPLEVLKNQV
Sbjct: 1 MTHNEKRQHWLKEGAIGLGTGVLYGVTSVAVGHPFDTIKTKMQAQEGFIKGPGMVRSFSTVLKTQGLPGLYKGALPPLLGSGVYRSTQFAVFEALYTKWDNEVGREEIPHTQGVQVRVVGAAVAAATARSLLECPIEFAKVARQTGQDWKLGQVYRGFGLQLGRTGGVMTTYFVTVDAIRRHHPSVFETKIGQFLASAGAATFGFWVVWPLEVLKNQV 218
BLAST of EWM24477.1 vs. NCBI_GenBank
Match: gi|919011054|ref|XP_013389954.1| (PREDICTED: mitochondrial arginine transporter BAC2-like [Lingula anatina]) HSP 1 Score: 274.633 bits (701), Expect = 4.598e-89 Identity = 131/221 (59.28%), Postives = 170/221 (76.92%), Query Frame = 0
Query: 1 MTHNEKRQHWLKEGAIGLGTGVLYGVTSVAVGHPFDTIKTKMQAQEGFIKGPGMVRSFSTVLKTQGLPGLYKGALPPLLGSGVYRSTQFAVFEALYTKWDNEVGREEIPHTQGVQVRVVGAAVAAATARSLLECPIEFAKVARQTGQDWKLGQVYRGFGLQLGRTGGVMTTYFVTVDAIRRHHPSVFETK-IGQFLASAGAATFGFWVVWPLEVLKNQVTG 220
MTHNE+R HW+KEG IGLG GVLYG TSVAVGHPFDTIKTKMQAQ GF KG GM+++ + +K+QG+ GLY+G +PPL GSG+YRSTQFAVFEA+YTK D+ G+ EIP T G+Q+RV+ + A+TAR+++E P+E+AK+ RQ W + +VY GFG+ L RT G+MT+YF+ VD IRR+H F+ +G FL S AAT +W+VWPLE +K+QV G
Sbjct: 1 MTHNEERAHWIKEGFIGLGVGVLYGTTSVAVGHPFDTIKTKMQAQVGFEKG-GMLKTLAKTIKSQGVIGLYRGCIPPLCGSGIYRSTQFAVFEAVYTKMDSNFGKYEIPATAGLQIRVIIGGLVASTARAVIETPLEYAKIRRQIQSTWTIREVYNGFGISLSRTLGLMTSYFIMVDYIRRNHAEHFQRPLLGPFLTSGIAATLAWWLVWPLEFMKSQVQG 220
BLAST of EWM24477.1 vs. NCBI_GenBank
Match: gi|1207976084|ref|XP_021378957.1| (protein dif-1-like [Mizuhopecten yessoensis] >gi|1205887159|gb|OWF38144.1| Mitochondrial substrate carrier family protein S [Mizuhopecten yessoensis]) HSP 1 Score: 273.863 bits (699), Expect = 9.141e-89 Identity = 140/265 (52.83%), Postives = 184/265 (69.43%), Query Frame = 0
Query: 1 MTHNEKRQHWLKEGAIGLGTGVLYGVTSVAVGHPFDTIKTKMQAQEGFIKGPGMVRSFSTVLKTQGLPGLYKGALPPLLGSGVYRSTQFAVFEALYTKWDNEVGREEIPHTQGVQVRVVGAAVAAATARSLLECPIEFAKVARQTGQDWKLGQVYRGFGLQLGRTGGVMTTYFVTVDAIRRHHPSVFETKI-GQFLASAGAATFGFWVVWPLEVLKNQVTGPLRLFSSPLSSWQSLFLVLFSSFSPVHFYRIFLRCTRSSVLFFG 264
MTHNE+R HW+KEGAIGLG GVLYG+T+ VGHPFDTIKTKMQ Q G+ K M ++ L+TQG+ GLY+G +PPL GSG+YRS+QFAVFEA+YT +D+ VGR EIP G+Q+RVVGA V A+T+R+++E P+E+AKV RQT Q W+L +VY GFG+ RT G+MTTYF+ VD+IRRH P +F+ I G FL S AAT +W+VWPLE +K Q+ + + + WQ + ++ YR + T S L G
Sbjct: 1 MTHNEERAHWVKEGAIGLGVGVLYGLTNTCVGHPFDTIKTKMQGQVGYEK-TNMFQTLGKTLRTQGVIGLYRGCIPPLWGSGIYRSSQFAVFEAMYTYFDSPVGRYEIPGLAGLQLRVVGAGVIASTSRAIIETPLEYAKVRRQTQQTWQLRKVYTGFGVTWARTIGLMTTYFMLVDSIRRHFPDLFKQPILGPFLTSGLAATAAWWIVWPLEYMKCQIQAD---YGNKMPVWQRMRFIVRERGGFFALYRGIMPGTIRSFLANG 261
BLAST of EWM24477.1 vs. NCBI_GenBank
Match: gi|240995037|ref|XP_002404567.1| (carnitine-acylcarnitine carrier protein, putative [Ixodes scapularis] >gi|215491589|gb|EEC01230.1| carnitine-acylcarnitine carrier protein, putative [Ixodes scapularis]) HSP 1 Score: 271.166 bits (692), Expect = 1.186e-87 Identity = 133/221 (60.18%), Postives = 165/221 (74.66%), Query Frame = 0
Query: 1 MTHNEKRQHWLKEGAIGLGTGVLYGVTSVAVGHPFDTIKTKMQAQEGFIKGPGMVRSFSTVLKTQGLPGLYKGALPPLLGSGVYRSTQFAVFEALYTKWDNEVGREEIPHTQGVQVRVVGAAVAAATARSLLECPIEFAKVARQTGQDWKLGQVYRGFGLQLGRTGGVMTTYFVTVDAIRRHHPSVFETK-IGQFLASAGAATFGFWVVWPLEVLKNQVTG 220
MTHNE+R HW+KEGAIGLG GVLYGVT+V VGHPFDTIKTKMQAQ GF + M +SF LKT G+ GLY+G +PPLLGSG+YRS QFAVFEA YT D + R EIP T G+Q RVV V A+TAR+++ECP+E+AK++RQ GQ W L +VY GFG+ RT G+MT+YF+ +D+ RRH F+ +G FL S AAT +W+VWPLE +K+QV G
Sbjct: 1 MTHNEERTHWIKEGAIGLGVGVLYGVTNVCVGHPFDTIKTKMQAQAGF-ESCSMFQSFRKTLKTGGVIGLYRGCVPPLLGSGIYRSVQFAVFEAAYTYLDGSIARSEIPFTAGLQTRVVVGGVIASTARAIIECPLEYAKISRQIGQTWTLRKVYTGFGVTWLRTVGLMTSYFIFLDSGRRHFNDYFQRPLLGPFLISGLAATAAWWIVWPLEYMKSQVQG 220
BLAST of EWM24477.1 vs. NCBI_GenBank
Match: gi|1191070218|ref|XP_020913754.1| (mitochondrial substrate carrier family protein L-like isoform X2 [Exaiptasia pallida]) HSP 1 Score: 265.774 bits (678), Expect = 4.511e-86 Identity = 134/221 (60.63%), Postives = 163/221 (73.76%), Query Frame = 0
Query: 1 MTHNEKRQHWLKEGAIGLGTGVLYGVTSVAVGHPFDTIKTKMQAQEGFIKGPGMVRSFSTVLKTQGLPGLYKGALPPLLGSGVYRSTQFAVFEALYTKWDNEVGREEIPHTQGVQVRVVGAAVAAATARSLLECPIEFAKVARQTGQDWKLGQVYRGFGLQLGRTGGVMTTYFVTVDAIRRHHPSVFETK-IGQFLASAGAATFGFWVVWPLEVLKNQVTG 220
MTHNEKR WL+EG IGLG GVLYG TSVAVGHPFDTIKTKMQAQ GF K GM+ SF L+ QG+ GLY+G +PPL GSG+YRSTQFAVFEA+YT + G +EIP T G+QVRV+ A A+T R+++E P+E AK+ RQTGQ W+ +YRGFG+ RT G+M TYFV VD+ RRH P F+ +G FL S AAT +W+VWPLE +K+QV G
Sbjct: 1 MTHNEKRIGWLQEGLIGLGVGVLYGTTSVAVGHPFDTIKTKMQAQAGFEK-TGMISSFVKTLRQQGIKGLYRGCVPPLWGSGIYRSTQFAVFEAIYTMMNTRRGVQEIPFTSGLQVRVLVAGAFASTTRAIIETPLELAKIRRQTGQSWQFKGLYRGFGVTWCRTMGLMCTYFVLVDSGRRHFPDHFKKPLLGPFLTSGIAATLAWWLVWPLEYMKSQVQG 220
BLAST of EWM24477.1 vs. NCBI_GenBank
Match: gi|1191070216|ref|XP_020913753.1| (mitochondrial ornithine transporter 2-like isoform X1 [Exaiptasia pallida]) HSP 1 Score: 265.774 bits (678), Expect = 1.259e-85 Identity = 134/221 (60.63%), Postives = 163/221 (73.76%), Query Frame = 0
Query: 1 MTHNEKRQHWLKEGAIGLGTGVLYGVTSVAVGHPFDTIKTKMQAQEGFIKGPGMVRSFSTVLKTQGLPGLYKGALPPLLGSGVYRSTQFAVFEALYTKWDNEVGREEIPHTQGVQVRVVGAAVAAATARSLLECPIEFAKVARQTGQDWKLGQVYRGFGLQLGRTGGVMTTYFVTVDAIRRHHPSVFETK-IGQFLASAGAATFGFWVVWPLEVLKNQVTG 220
MTHNEKR WL+EG IGLG GVLYG TSVAVGHPFDTIKTKMQAQ GF K GM+ SF L+ QG+ GLY+G +PPL GSG+YRSTQFAVFEA+YT + G +EIP T G+QVRV+ A A+T R+++E P+E AK+ RQTGQ W+ +YRGFG+ RT G+M TYFV VD+ RRH P F+ +G FL S AAT +W+VWPLE +K+QV G
Sbjct: 1 MTHNEKRIGWLQEGLIGLGVGVLYGTTSVAVGHPFDTIKTKMQAQAGFEK-TGMISSFVKTLRQQGIKGLYRGCVPPLWGSGIYRSTQFAVFEAIYTMMNTRRGVQEIPFTSGLQVRVLVAGAFASTTRAIIETPLELAKIRRQTGQSWQFKGLYRGFGVTWCRTMGLMCTYFVLVDSGRRHFPDHFKKPLLGPFLTSGIAATLAWWLVWPLEYMKSQVQG 220
BLAST of EWM24477.1 vs. NCBI_GenBank
Match: gi|1005455434|ref|XP_015764849.1| (PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein [Acropora digitifera]) HSP 1 Score: 261.922 bits (668), Expect = 4.215e-84 Identity = 140/221 (63.35%), Postives = 172/221 (77.83%), Query Frame = 0
Query: 1 MTHNEKRQHWLKEGAIGLGTGVLYGVTSVAVGHPFDTIKTKMQAQEGFIKGPGMVRSFSTVLKTQGLPGLYKGALPPLLGSGVYRSTQFAVFEALYTKWDNEVGREEIPHTQGVQVRVVGAAVAAATARSLLECPIEFAKVARQTGQDWKLGQVYRGFGLQLGRTGGVMTTYFVTVDAIRRHHPSVFETKI-GQFLASAGAATFGFWVVWPLEVLKNQVTG 220
MTHNEKR HW++EG IGLG GVLYG TSVAVGHPFDTIKTKMQAQ+GF + GM+R+F+ +K QG+ GLYKG++PPL GSG+YRSTQFAVFEALYT + N GR EIP T G+QVRV+ A AAATAR+++E P+E AK+ RQTGQ W+ +YRGFG+ RT G+M TYF+ +D+ RR P +F I G FLAS AATF +W+VWPLE +K+QV G
Sbjct: 1 MTHNEKRIHWIQEGLIGLGVGVLYGTTSVAVGHPFDTIKTKMQAQKGF-EHEGMIRTFTRTVKAQGIRGLYKGSIPPLWGSGIYRSTQFAVFEALYT-YFNGFGRREIPLTGGLQVRVLLAGAAAATARAIIETPLELAKIRRQTGQTWQFKGLYRGFGVTWYRTMGLMCTYFILLDSGRRKFPDLFRRPILGPFLASGIAATFAWWIVWPLENMKSQVQG 219
BLAST of EWM24477.1 vs. NCBI_GenBank
Match: gi|340380117|ref|XP_003388570.1| (PREDICTED: mitochondrial substrate carrier family protein S-like [Amphimedon queenslandica]) HSP 1 Score: 258.07 bits (658), Expect = 1.671e-82 Identity = 136/253 (53.75%), Postives = 173/253 (68.38%), Query Frame = 0
Query: 1 MTHNEKRQHWLKEGAIGLGTGVLYGVTSVAVGHPFDTIKTKMQAQEGFIKGPGMVRSFSTVLKTQGLPGLYKGALPPLLGSGVYRSTQFAVFEALYTKWD--NEVGREEIPHTQGVQVRVVGAAVAAATARSLLECPIEFAKVARQTGQDWKLGQVYRGFGLQLGRTGGVMTTYFVTVDAIRRHHPSVFETKI-GQFLASAGAATFGFWVVWPLEVLKNQVTGPLRLFSSPLSSWQSLFLVLFSSFSPVHFYR 250
MTHNEKR W +EG IGLG GVLYG TSVAVGHPFDTIKTKMQAQ+GF + M SF L+TQG+ GLYKG LPPL+GSG++RS QFAVFE +YT D + G+ EI T G+Q RVV + +T R+++E P+E+AK+ RQT Q+W+LGQVY+GFG+ RT G+M TYF+ +D RR +P +F I G F+ S AATF +WVVWP E +K+Q+ G + LS Q + LV+ V YR
Sbjct: 1 MTHNEKRTSWWREGLIGLGVGVLYGTTSVAVGHPFDTIKTKMQAQKGF-ESSSMYSSFIKTLQTQGIRGLYKGCLPPLMGSGIFRSAQFAVFEGVYTYLDKYDTFGKREIHFTCGLQHRVVIGGLCGSTVRAIIETPLEYAKIRRQTQQEWRLGQVYKGFGVTWLRTVGLMCTYFIIIDHNRRRNPHLFNIPILGPFIVSGFAATFAWWVVWPFEYMKSQIQGGYG--NKDLSLIQRMRLVVKERGGVVGLYR 250
BLAST of EWM24477.1 vs. NCBI_GenBank
Match: gi|156356465|ref|XP_001623943.1| (predicted protein [Nematostella vectensis] >gi|156210688|gb|EDO31843.1| predicted protein [Nematostella vectensis]) HSP 1 Score: 256.529 bits (654), Expect = 6.742e-82 Identity = 132/222 (59.46%), Postives = 163/222 (73.42%), Query Frame = 0
Query: 1 MTHNEKRQHWLKEGAIGLGTGVLYGVTSVAVGHPFDTIKTKMQAQEGFIKGPGMVRSFSTVLKTQGLPGLYKGALPPLLGSGVYRSTQFAVFEALYTKWDN-EVGREEIPHTQGVQVRVVGAAVAAATARSLLECPIEFAKVARQTGQDWKLGQVYRGFGLQLGRTGGVMTTYFVTVDAIRRHHPSVFETK-IGQFLASAGAATFGFWVVWPLEVLKNQVTG 220
MTHNEKR WL+EG IGLG GVLYG TSVAVGHPFDTIKTKMQAQ GF K M++SF +KTQG+ GLY+G +PPL GSG+YRSTQFAVFEA YT + +EIP T G+Q+RVV A + +T+R+++E P+E AKV RQTGQ W+ +Y+GFG+ RT G+MTTYF+ VD RRH P F+ +G FL S AAT +W+VWPLE +K+QV G
Sbjct: 1 MTHNEKRIGWLQEGMIGLGVGVLYGTTSVAVGHPFDTIKTKMQAQAGFEK-TSMIKSFIKTVKTQGIRGLYRGCVPPLWGSGIYRSTQFAVFEAAYTFLSHHRTCTKEIPFTGGLQLRVVLAGMLGSTSRAIIETPLELAKVRRQTGQSWQFRGLYKGFGVTWCRTMGLMTTYFILVDTGRRHFPEQFKRPLLGPFLTSGIAATLAWWIVWPLEYMKSQVQG 221 The following BLAST results are available for this feature:
BLAST of EWM24477.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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