EWM24488.1, cds6185 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24488.1 vs. NCBI_GenBank
Match: gi|585105969|gb|EWM24488.1| (pyoverdine thioesterase component, partial [Nannochloropsis gaditana]) HSP 1 Score: 727.628 bits (1877), Expect = 0.000e+0 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0 Query: 1 MGCCGSRPSTASRCAAKNSTIPPSPVAPLQGEELRACFVTPPASATTNNLPSRFLLYRLPWEGTTSTIFDDWRQLPYVEVVTLVLPARLGKSITKHPKNVRVMANHLAHAISSSLNNKDAQKKGPGKERAPAPAQPFVLFGHSFMGGLLALEVARALIDIYRLPPHSIVISACPSPPASSSPSSYSTRLSSLPTPQLLAFLVSTGALSAHLAQSKETRTTLLPLFKADLAAVDAYMLSPSSSLPSSLPLPCPLLAIACEGDTLATAESMEGWRSFTSSSFSLSSLPLSLPPSTDRHHHVRPASEALFRALSLHLHRQPILTRDVQVLLPSLPPSLPPSFSASLSPHVPSCPFSLLAATVSWRCSVHPCI 369 MGCCGSRPSTASRCAAKNSTIPPSPVAPLQGEELRACFVTPPASATTNNLPSRFLLYRLPWEGTTSTIFDDWRQLPYVEVVTLVLPARLGKSITKHPKNVRVMANHLAHAISSSLNNKDAQKKGPGKERAPAPAQPFVLFGHSFMGGLLALEVARALIDIYRLPPHSIVISACPSPPASSSPSSYSTRLSSLPTPQLLAFLVSTGALSAHLAQSKETRTTLLPLFKADLAAVDAYMLSPSSSLPSSLPLPCPLLAIACEGDTLATAESMEGWRSFTSSSFSLSSLPLSLPPSTDRHHHVRPASEALFRALSLHLHRQPILTRDVQVLLPSLPPSLPPSFSASLSPHVPSCPFSLLAATVSWRCSVHPCI Sbjct: 1 MGCCGSRPSTASRCAAKNSTIPPSPVAPLQGEELRACFVTPPASATTNNLPSRFLLYRLPWEGTTSTIFDDWRQLPYVEVVTLVLPARLGKSITKHPKNVRVMANHLAHAISSSLNNKDAQKKGPGKERAPAPAQPFVLFGHSFMGGLLALEVARALIDIYRLPPHSIVISACPSPPASSSPSSYSTRLSSLPTPQLLAFLVSTGALSAHLAQSKETRTTLLPLFKADLAAVDAYMLSPSSSLPSSLPLPCPLLAIACEGDTLATAESMEGWRSFTSSSFSLSSLPLSLPPSTDRHHHVRPASEALFRALSLHLHRQPILTRDVQVLLPSLPPSLPPSFSASLSPHVPSCPFSLLAATVSWRCSVHPCI 369
BLAST of EWM24488.1 vs. NCBI_GenBank
Match: gi|516192096|ref|WP_017603268.1| (thioesterase [Nocardiopsis alkaliphila]) HSP 1 Score: 91.2781 bits (225), Expect = 1.577e-17 Identity = 78/234 (33.33%), Postives = 108/234 (46.15%), Query Frame = 0 Query: 56 LYRLPWEGTTSTIFDDWRQL--PYVEVVTLVLPARLGKSITKHP-KNVRVMANHLAHAISSSLNNKDAQKKGPGKERAPAPAQPFVLFGHSFMGGLLALEVARALIDIYRLPPHSIVISACPSPPASSSPSSYSTRLSSLPTPQLLAFLVSTGALSAHLAQSKETRTTLLPLFKADLAAVDAYMLSPSSSLPSSLPLPCPLLAIACEGDTLATAESMEGWRSFTSSSFSLSSLP 286 LY P+ G T+ + W VEVV + LPAR G +T+ P ++ A+ +A AI S + +P +LFGHS MG +LA EVAR L D R P + +SA PSP R+S LP + L L GA + ++ E LLP+ +AD + ++ Y S S +PL CP+LA + D T E M GW T + F LP Sbjct: 24 LYCFPFAGGTANFYAGWHDDLDSTVEVVPIQLPAR-GPRMTEPPVDDLATAADRIAEAIGSE---------------STSP----LLFGHS-MGAILAFEVARRLDDTDR-PVGFLFVSARPSPRLVRP----RNRVSHLPRAKFLRMLRDYGAAGEEILENDELVDLLLPMIRADFSLIERYRYS------SGVPLSCPILAWCGDKDPEVTPEEMTGWGQETIAGFEQFVLP 225
BLAST of EWM24488.1 vs. NCBI_GenBank
Match: gi|1158515581|ref|WP_079047443.1| (hypothetical protein [Streptomyces kanasensis]) HSP 1 Score: 91.2781 bits (225), Expect = 2.659e-17 Identity = 70/234 (29.91%), Postives = 111/234 (47.44%), Query Frame = 0 Query: 56 LYRLPWEGTTSTIFDDW---RQLPYVEVVTLVLPARLGKSITKHPKNVRVMANHLAHAISSSLNNKDAQKKGPGKERAPAPAQPFVLFGHSFMGGLLALEVARALIDIYRLPPHSIVISACPSPPASSSPSSYSTRLSSLPTPQLLAFLVSTGALSAHLAQSKETRTTLLPLFKADLAAVDAYMLSPSSSLPSSLPLPCPLLAIACEGDTLATAESMEGWRSFTSSSFSLSSLP 286 +Y LP G ++ + W RQ+P ++ V + LP R + + P ++ + + S L + P +E PF+LFGHS MG +A E R L+ R P ++V+S C PP S R +LL +V G A + + +E LLP+ +ADL + YM + ++ LPCP++A+ +GD L+ E ++GWRS T+ F LP Sbjct: 46 VYCLPHAGGSAGSYLAWARSRQVPGLDFVPVELPGRGTRMAEQLPASM----EEVVDGVLSVLEAR------PERE-------PFLLFGHS-MGAQIAYETTRRLVAGGRPLPRTLVVSGC-RPPGSPVAMPLHDRDDD----ELLKGIVELGGTPAEILEHRELLAMLLPVMRADLGLLARYMEAVRPTV-----LPCPVVALGGDGDRLSGPEWIDGWRSVTAGGFRRRILP 251
BLAST of EWM24488.1 vs. NCBI_GenBank
Match: gi|971325144|gb|KUH35992.1| (hypothetical protein ATE80_26045 [Streptomyces kanasensis]) HSP 1 Score: 90.1225 bits (222), Expect = 3.512e-17 Identity = 70/234 (29.91%), Postives = 111/234 (47.44%), Query Frame = 0 Query: 56 LYRLPWEGTTSTIFDDW---RQLPYVEVVTLVLPARLGKSITKHPKNVRVMANHLAHAISSSLNNKDAQKKGPGKERAPAPAQPFVLFGHSFMGGLLALEVARALIDIYRLPPHSIVISACPSPPASSSPSSYSTRLSSLPTPQLLAFLVSTGALSAHLAQSKETRTTLLPLFKADLAAVDAYMLSPSSSLPSSLPLPCPLLAIACEGDTLATAESMEGWRSFTSSSFSLSSLP 286 +Y LP G ++ + W RQ+P ++ V + LP R + + P ++ + + S L + P +E PF+LFGHS MG +A E R L+ R P ++V+S C PP S R +LL +V G A + + +E LLP+ +ADL + YM + ++ LPCP++A+ +GD L+ E ++GWRS T+ F LP Sbjct: 24 VYCLPHAGGSAGSYLAWARSRQVPGLDFVPVELPGRGTRMAEQLPASM----EEVVDGVLSVLEAR------PERE-------PFLLFGHS-MGAQIAYETTRRLVAGGRPLPRTLVVSGC-RPPGSPVAMPLHDRDDD----ELLKGIVELGGTPAEILEHRELLAMLLPVMRADLGLLARYMEAVRPTV-----LPCPVVALGGDGDRLSGPEWIDGWRSVTAGGFRRRILP 229
BLAST of EWM24488.1 vs. NCBI_GenBank
Match: gi|655268779|ref|WP_028678713.1| (thioesterase [Salinispora arenicola]) HSP 1 Score: 89.3521 bits (220), Expect = 8.137e-17 Identity = 69/230 (30.00%), Postives = 102/230 (44.35%), Query Frame = 0 Query: 59 LPWEGTTSTIFDDWRQL--PYVEVVTLVLPARLGKSITKHPKNVRVMANHLAHAISSSLNNKDAQKKGPGKERAPAPAQPFVLFGHSFMGGLLALEVARALIDIYRLPPHSIVISACPSPPASSSPSSYSTRLSSLPTPQLLAFLVSTGALSAHLAQSKETRTTLLPLFKADLAAVDAYMLSPSSSLPSSLPLPCPLLAIACEGDTLATAESMEGWRSFTSSSFSLSSLP 286 P G +T + +W L P +E+V + LP R + + V + N L A+ L+ +PF +GHS G LA E+A+AL R P + +SA P+P + +L LP + A LV G L +A + +LLP +AD + + +P SS+ CP+ A+A E D A E ME WRSFT++ F L P Sbjct: 30 FPHAGAGATTYAEWGSLLPPEIELVAVQLPGRQNRIAEEPFTEVAPLVNVLVQALRPVLD------------------RPFAFYGHS-CGAALAYEMAQALQARGRSVPERLFLSAQPAPDVTVQ------QLHGLPDDEFRAELVRLGGLEEEVATDESLMASLLPTLRADFRLWERHRPAPGSSVH------CPITALAGESDLRAPMEDMERWRSFTTAEFDLQRYP 228
BLAST of EWM24488.1 vs. NCBI_GenBank
Match: gi|1181239025|ref|WP_084556101.1| (hypothetical protein [Couchioplanes caeruleus]) HSP 1 Score: 87.4261 bits (215), Expect = 3.214e-16 Identity = 77/262 (29.39%), Postives = 116/262 (44.27%), Query Frame = 0 Query: 27 APLQGEELRACFVTPPASATTNNLPSRFLLYRLPWEGTTSTIFDDWRQLPYVEVVTLVLPARLGKSITKHPKNVRVMANHLAHAISSSLNNKDAQKKGPGKERAPAPAQPFVLFGHSFMGGLLALEVARALIDIYRLPPHSIVISACPSP--PASSSPSSYSTRLSSLPTPQLLAFLVSTGALSAHLAQSKETRTTLLPLFKADLAAVDAYMLSPSSSLPSSLPLPCPLLAIACEGDTLATAESMEGWRSFTSSSFSLSSLP 286 AP++ +RA + P++ T ++ YR ++ D R P VEV + LP R + P+++ + LA AI ++ PF + GHS MG L+A EVAR L D+ PP +++SA P+P P S+ + T LP +LL +L + G + A +E LLP + DL A ++Y P+ PLP P+ A A D L E + W T F L+ LP Sbjct: 13 APMRAANVRARLIAVPSAGGTPSM------YR--------SLAD--RLAPDVEVWAVQLPGRERRFGEPVPESLAEIVPALATAIGDTIE------------------PPFAILGHS-MGALIAYEVARRLCDLGEPPPQRLLVSAFPAPHLPLWSAQAPRHT----LPDEELLRWLAAAGGMPAEALADRELMALLLPSIRGDLRACESYAYRPAP------PLPMPVTAFAGSDDALVPVEHVAAWDRHTDGDFDLNVLP 229
BLAST of EWM24488.1 vs. NCBI_GenBank
Match: gi|1028182172|ref|WP_063928484.1| (thioesterase [Methylobacterium aquaticum]) HSP 1 Score: 87.4261 bits (215), Expect = 4.231e-16 Identity = 71/233 (30.47%), Postives = 106/233 (45.49%), Query Frame = 0 Query: 56 LYRLPWEGTTSTIFDDWRQLPYVEVVTLVLPARLGKSITKHPKNVRVMANHLAHAISSSLNNKDAQKKGPGKERAPAPAQPFVLFGHSFMGGLLALEVARALIDIYRLPPHSIVISACPSPPASSSPSSYSTRLSSLP--TPQLLAFLVSTGALSAHLAQSKETRTTLLPLFKADLAAVDAYMLSPSSSLPSSLPLPCPLLAIACEGDTLATAESMEGWRSFTSSSFSLSSLP 286 L+ +P+ G ++ I+ W L V + P L T+ + V +HLA A++ L + R PA P+ LFGHS +G L+A E+A ALI PP +V S +S+P+ R P +L+A L + G + S E +LP+ +AD AY P PLPCP+ + E D + E++EGWR T++ F LS P Sbjct: 10 LFCIPYSGASAAIYARWSFL--VPDAIAIHPVELPGRGTRADEPFAVDPHHLAEALAKELADL---------HRLADPAVPYALFGHS-LGALVAYELAHALIRRGAAPPRLLVASG------TSAPAMRDDRAWRRPRSDTELIADLRAMGGTPEEVIASPELMEMVLPVLRADFLMCGAYAFRPRP------PLPCPIRVLGGEQDDV-PGEALEGWRRETATGFGLSLFP 217
BLAST of EWM24488.1 vs. NCBI_GenBank
Match: gi|1052288395|emb|SCG16909.1| (Surfactin synthase thioesterase subunit [Micromonospora echinofusca]) HSP 1 Score: 86.6557 bits (213), Expect = 5.570e-16 Identity = 71/232 (30.60%), Postives = 112/232 (48.28%), Query Frame = 0 Query: 56 LYRLPWEGTTSTIFDDWRQ--LPYVEVVTLVLPARLGKSITKHPKNVRVMANHLAHAISSSLNNKDAQKKGPGKERAPAPAQPFVLFGHSFMGGLLALEVARALIDIYRLPPHSIVISACPSPPASSSPSSYSTRLSSLPTPQLLAFLVSTGALSAHLAQSKETRTTLLPLFKADLAAVDAYMLSPSSSLPSSLPLPCPLLAIACEGDTLATAESMEGWRSFTSSSFSLSSL 285 L+ LP+ G +++F W+ P VEV+ + LP R + I+++P A +A+AI+ + P+ ++GHS MGG + EV R L R P + + +P S+ PS + LS + +LL L + G L A L + E LLPL +AD A VD Y +P + PLP P++A A GD + E +GWR +++ F+L + Sbjct: 17 LFCLPYAGGGASVFRRWQDGLAPDVEVLPVQLPGRENR-ISENPV---FRAADVAYAIAERIRG------------------PYAIYGHS-MGGRVGFEVVRELRRAGRPLPLRLYVGGARAPHVSA-PSHFDG-LSRVADDELLRRLEAGGGLPAGLLEYPELVELLLPLLRADFAQVDDYRYTPEA------PLPMPIVAFAGRGDDTVSREHSDGWREHSAAGFTLREI 217
BLAST of EWM24488.1 vs. NCBI_GenBank
Match: gi|1104182184|gb|OJF15783.1| (Thioesterase [Couchioplanes caeruleus subsp. caeruleus]) HSP 1 Score: 86.2705 bits (212), Expect = 7.423e-16 Identity = 73/238 (30.67%), Postives = 106/238 (44.54%), Query Frame = 0 Query: 53 RFLLYRLPWEGTTSTIFDDW--RQLPYVEVVTLVLPARLGKSITKHPKNVRVMANHLAHAISSSLNNKDAQKKGPGKERAPAPAQPFVLFGHSFMGGLLALEVARALIDIYRLPPHSIVISACPSP--PASSSPSSYSTRLSSLPTPQLLAFLVSTGALSAHLAQSKETRTTLLPLFKADLAAVDAYMLSPSSSLPSSLPLPCPLLAIACEGDTLATAESMEGWRSFTSSSFSLSSLP 286 R L +P G T +++ R P VEV + LP R + P+++ + LA AI ++ PF + GHS MG L+A EVAR L D+ PP +++SA P+P P S+ + T LP +LL +L + G + A +E LLP + DL A ++Y P+ PLP P+ A A D L E + W T F L+ LP Sbjct: 7 RARLIAVPSAGGTPSMYRSLADRLAPDVEVWAVQLPGRERRFGEPVPESLAEIVPALATAIGDTIE------------------PPFAILGHS-MGALIAYEVARRLCDLGEPPPQRLLVSAFPAPHLPLWSAQAPRHT----LPDEELLRWLAAAGGMPAEALADRELMALLLPSIRGDLRACESYAYRPAP------PLPMPVTAFAGSDDALVPVEHVAAWDRHTDGDFDLNVLP 215
BLAST of EWM24488.1 vs. NCBI_GenBank
Match: gi|926351411|ref|WP_053683050.1| (thioesterase [Streptomyces sp. WM4235] >gi|925406846|gb|KOU41103.1| gramicidin biosynthesis protein GrsT [Streptomyces sp. WM4235]) HSP 1 Score: 85.5001 bits (210), Expect = 1.885e-15 Identity = 67/237 (28.27%), Postives = 102/237 (43.04%), Query Frame = 0 Query: 52 SRFLLYRLPWEGTTSTIFDDWRQL--PYVEVVTLVLPARLGKSITKHPKNVRVMANHLAHAISSSLNNKDAQKKGPGKERAPAPAQPFVLFGHSFMGGLLALEVARALIDIYRLPPHSIVISACPSPPASSSPSSYSTRLSSLPTPQLLAFLVSTGALSAHLAQSKETRTTLLPLFKADLAAVDAYMLSPSSSLPSSLPLPCPLLAIACEGDTLATAESMEGWRSFTSSSFSLSSLP 286 SR L P G +T + DW L P +E+V + LP R + + + V + L HA+ L F FGHS G LA E+A+AL P ++ +SA P+P A+ Y LP + + G + +A + +LLP+ +AD + + +P + PL CP+ IA +GD A ES+EGWR T+ +F + P Sbjct: 23 SRHRLICFPHAGAGATAYADWVPLLPPDIELVAVQLPGRQNRIVEEPFTEVAPLVQTLVHALRPVLGGS------------------FSFFGHS-CGAALAFELAKALRARGGPVPRALFLSAQPAPGATGVRPLYD-----LPDEEFHQAMTELGGIDEEIAADEFVMASLLPVLRADFTLWERHRTAPDA------PLDCPITVIAGDGDPRAPRESVEGWRDQTTGAFEVHFRP 229 The following BLAST results are available for this feature:
BLAST of EWM24488.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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