EWM24492.1, cds6181 (CDS) Nannochloropsis gaditana

Overview
NameEWM24492.1
Unique Namecds6181
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:817510..817711 +
Alignment locationCM002467.1:817794..817906 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24492.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101876g1.9908.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:817510..817711 +
CM002467.1supercontigCM002467.1:817794..817906 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM24492.1 vs. NCBI_GenBank
Match: gi|585105974|gb|EWM24492.1| (hypothetical protein Naga_101876g1 [Nannochloropsis gaditana])

HSP 1 Score: 212.231 bits (539), Expect = 1.093e-69
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 
Query:    1 MRMTGKHEGCVFNGGTKEILNSKFWISGAYAGKSCKISHSWTPREGGRCWEGEKTKREVVGRQTTREGRHERRARGRREWKAVHGPAFFILNTSHDREAVRDRR 104
            MRMTGKHEGCVFNGGTKEILNSKFWISGAYAGKSCKISHSWTPREGGRCWEGEKTKREVVGRQTTREGRHERRARGRREWKAVHGPAFFILNTSHDREAVRDRR
Sbjct:    1 MRMTGKHEGCVFNGGTKEILNSKFWISGAYAGKSCKISHSWTPREGGRCWEGEKTKREVVGRQTTREGRHERRARGRREWKAVHGPAFFILNTSHDREAVRDRR 104
The following BLAST results are available for this feature:
BLAST of EWM24492.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105974|gb|EWM24492.1|1.093e-69100.00hypothetical protein Naga_101876g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6196rna6196Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications