EWM30065.1, cds615 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|585112697|gb|EWM30065.1| (glucokinase [Nannochloropsis gaditana]) HSP 1 Score: 612.838 bits (1579), Expect = 0.000e+0 Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0
Query: 1 MTERIKFSGKGRDRGAAVGEIFCPPIVLLNDADAALSAEMWAGAARGQLGVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVGVWGAARAASLRVRGKEDENISKEKK 305
MTERIKFSGKGRDRGAAVGEIFCPPIVLLNDADAALSAEMWAGAARGQLGVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVGVWGAARAASLRVRGKEDENISKEKK
Sbjct: 1 MTERIKFSGKGRDRGAAVGEIFCPPIVLLNDADAALSAEMWAGAARGQLGVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVGVWGAARAASLRVRGKEDENISKEKK 305
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|553188732|ref|XP_005854855.1| (glucokinase [Nannochloropsis gaditana CCMP526] >gi|422294209|gb|EKU21509.1| glucokinase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 598.201 bits (1541), Expect = 0.000e+0 Identity = 300/305 (98.36%), Postives = 301/305 (98.69%), Query Frame = 0
Query: 1 MTERIKFSGKGRDRGAAVGEIFCPPIVLLNDADAALSAEMWAGAARGQLGVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVGVWGAARAASLRVRGKEDENISKEKK 305
MTERIKFSGKGRDRGAAVGEIFCPPIVLLNDADAALSAEMWAGAARGQLGVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRD DSEEESEADEVPFTSKDVFEAALSLGRN PPPDSLA+QVVEEVADYLGLGCLNLCRVVDP LILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVG WGAARAASLRVRGKEDENISKEKK
Sbjct: 1 MTERIKFSGKGRDRGAAVGEIFCPPIVLLNDADAALSAEMWAGAARGQLGVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDRDSEEESEADEVPFTSKDVFEAALSLGRNDPPPDSLAMQVVEEVADYLGLGCLNLCRVVDPDLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVGAWGAARAASLRVRGKEDENISKEKK 305
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|635372549|emb|CCI39353.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 154.451 bits (389), Expect = 3.336e-41 Identity = 93/259 (35.91%), Postives = 135/259 (52.12%), Query Frame = 0
Query: 20 EIFCPPIVLLNDADAALSAEMWAGAARGQL-GVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGD 277
E F + +LNDADAA+ AE+W GAA+ + +M+TLGTGIGV L ++GQ+ G+ GL+EGGHM++EK GR CGC Q GCLE Y SA+A+ + K ++KA G + S+A + T++ +F A+ D + + +VEE ADYLG C+NL R++DP LILF+GG++ AG F+D+++ Y W PN V K ++ G D
Sbjct: 100 ERFDQRVEILNDADAAVLAELWVGAAKRDVQSFIMITLGTGIGVGLVIDGQLIRGAHGLLEGGHMIIEKDGRQCGCSQRGCLEAYASATAL------ISCAKMKLKA---------------------------------------------GTPTKLSDAHDQTITAEMIFGLAVK-------GDRMCMDIVEEAADYLGFACVNLSRILDPELILFSGGLAEAGNFFVDLIRKAAVKYSWTKFPNRVSIKRSSTGYD 300
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|635372547|emb|CCI39351.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 157.147 bits (396), Expect = 6.209e-40 Identity = 93/259 (35.91%), Postives = 135/259 (52.12%), Query Frame = 0
Query: 20 EIFCPPIVLLNDADAALSAEMWAGAARGQL-GVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGD 277
E F + +LNDADAA+ AE+W GAA+ + +M+TLGTGIGV L ++GQ+ G+ GL+EGGHM++EK GR CGC Q GCLE Y SA+A+ + K ++KA G + S+A + T++ +F A+ D + + +VEE ADYLG C+NL R++DP LILF+GG++ AG F+D+++ Y W PN V K ++ G D
Sbjct: 402 ERFDQRVEILNDADAAVLAELWVGAAKRDVQSFIMITLGTGIGVGLVIDGQLIRGAHGLLEGGHMIIEKDGRQCGCSQRGCLEAYASATAL------ISCAKMKLKA---------------------------------------------GTPTKLSDAHDQTITAEMIFGLAVK-------GDRMCMDIVEEAADYLGFACVNLSRILDPELILFSGGLAEAGNFFVDLIRKAAVKYSWTKFPNRVSIKRSSTGYD 602
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|635372546|emb|CCI39350.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 157.147 bits (396), Expect = 7.103e-40 Identity = 93/259 (35.91%), Postives = 135/259 (52.12%), Query Frame = 0
Query: 20 EIFCPPIVLLNDADAALSAEMWAGAARGQL-GVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGD 277
E F + +LNDADAA+ AE+W GAA+ + +M+TLGTGIGV L ++GQ+ G+ GL+EGGHM++EK GR CGC Q GCLE Y SA+A+ + K ++KA G + S+A + T++ +F A+ D + + +VEE ADYLG C+NL R++DP LILF+GG++ AG F+D+++ Y W PN V K ++ G D
Sbjct: 423 ERFDQRVEILNDADAAVLAELWVGAAKRDVQSFIMITLGTGIGVGLVIDGQLIRGAHGLLEGGHMIIEKDGRQCGCSQRGCLEAYASATAL------ISCAKMKLKA---------------------------------------------GTPTKLSDAHDQTITAEMIFGLAVK-------GDRMCMDIVEEAADYLGFACVNLSRILDPELILFSGGLAEAGNFFVDLIRKAAVKYSWTKFPNRVSIKRSSTGYD 623
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|635372548|emb|CCI39352.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 156.762 bits (395), Expect = 8.333e-40 Identity = 93/259 (35.91%), Postives = 135/259 (52.12%), Query Frame = 0
Query: 20 EIFCPPIVLLNDADAALSAEMWAGAARGQL-GVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGD 277
E F + +LNDADAA+ AE+W GAA+ + +M+TLGTGIGV L ++GQ+ G+ GL+EGGHM++EK GR CGC Q GCLE Y SA+A+ + K ++KA G + S+A + T++ +F A+ D + + +VEE ADYLG C+NL R++DP LILF+GG++ AG F+D+++ Y W PN V K ++ G D
Sbjct: 389 ERFDQRVEILNDADAAVLAELWVGAAKRDVQSFIMITLGTGIGVGLVIDGQLIRGAHGLLEGGHMIIEKDGRQCGCSQRGCLEAYASATAL------ISCAKMKLKA---------------------------------------------GTPTKLSDAHDQTITAEMIFGLAVK-------GDRMCMDIVEEAADYLGFACVNLSRILDPELILFSGGLAEAGNFFVDLIRKAAVKYSWTKFPNRVSIKRSSTGYD 589
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|325181090|emb|CCA15502.1| (glucokinase putative [Albugo laibachii Nc14]) HSP 1 Score: 152.525 bits (384), Expect = 1.451e-39 Identity = 88/251 (35.06%), Postives = 132/251 (52.59%), Query Frame = 0
Query: 28 LLNDADAALSAEMWAGAARGQL-GVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGD 277
LLNDADAA+ AE+W GAA+ + +M+TLGTGIGV + ++G++ G+RGL+EGGHM++EK GR C C Q GCLE Y SA+A+ + + K +++A G S+A T++ +F+ A D++ L +VEE AD LG C+N R++ P LILF+GG++ AG FL+M++ ++ Y W PN+V + +T G D
Sbjct: 192 LLNDADAAVLAEIWVGAAKKVVENFIMITLGTGIGVGVVIDGRLIRGARGLLEGGHMIIEKNGRPCPCSQRGCLEAYASATAL------ISYAKMKLEA---------------------------------------------GTPSRLSQAHNESITAEMIFKLA-------EEGDTMCLGIVEEAADCLGFACVNFSRILYPELILFSGGLAEAGEFFLEMIRRAYSKYTWTKFPNEVSVRKSTAGYD 384
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|953487817|emb|CEG48645.1| (glucokinase [Plasmopara halstedii]) HSP 1 Score: 145.206 bits (365), Expect = 1.392e-37 Identity = 92/279 (32.97%), Postives = 131/279 (46.95%), Query Frame = 0
Query: 21 IFCPPIVLLNDADAALSAEMWAGAAR-GQLGVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVGVWGAARAASLRVRGKEDE 298
I PI + NDADAA+ AE W G AR G +MLTLGTG+G +NG++ G VEGGH++VE+ GR CGC Q GCLE Y SASA+ + +E H R G+ S+ E ++ VF+ A D L ++E ADYLG C+ CR++DP +I+ +GG++ AG +++ ++ + Y W LPN V + A+ G DS G+ GA + R + K E
Sbjct: 101 ILDKPITVCNDADAAILAEQWVGTARSGVKDFIMLTLGTGVGFGAVVNGELVRGGNNAVEGGHIIVERNGRLCGCSQRGCLEAYSSASALIHQVQE---------------------------------------------------HLRAGEVSSVSQYLETQIDAELVFKLA-------SEGDELCQHLIESAADYLGFACVTFCRMLDPEIIVLSGGIAEAGESYIEKIRLAYAKYSWTRLPNPVRIEKASAGYDS-GIIGAVAVHACRKQLKTHE 320
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|1214713977|gb|OWZ24853.1| (Glucokinase [Phytophthora megakarya]) HSP 1 Score: 144.821 bits (364), Expect = 2.335e-37 Identity = 90/272 (33.09%), Postives = 134/272 (49.26%), Query Frame = 0
Query: 25 PIVLLNDADAALSAEMWAGAARGQLG-VVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVGVWGAARAASLRVRGK 295
P+ + NDADAA+ AE W G A+G + +MLTLGTG+G + NGQ+ G +EGGHM+VE+ GR CGC Q GCLE Y SA A+ +A+E + G L + RD SEAD ++ VF+ A D L ++EE ADYLG C+ CR++DP +I+ +GG++ AG +++ ++ + + W PN V + A+ G DS G+ GA ++ +G+
Sbjct: 110 PVTVCNDADAAILAEQWVGTAKGGIQDFIMLTLGTGVGFGVVANGQLVRGGSNAIEGGHMIVERNGRQCGCTQRGCLEAYSSAGALMSQAQE------------HLRAGVLLAV-------------------------VAVYWSRDSSLANYSEAD---INAEFVFKHA-------AEGDELCKHLIEEAADYLGFACVTFCRMLDPQIIVLSGGIAEAGETYIEQIRRAYEKHSWTKFPNPVRIEKASAGYDS-GIIGAVAVCRIQRKGQ 333
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|301117420|ref|XP_002906438.1| (glucokinase, putative [Phytophthora infestans T30-4] >gi|262107787|gb|EEY65839.1| glucokinase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 142.895 bits (359), Expect = 1.191e-36 Identity = 86/272 (31.62%), Postives = 128/272 (47.06%), Query Frame = 0
Query: 25 PIVLLNDADAALSAEMWAGAARGQL-GVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVGVWGAARAASLRVRGK 295
P+ + NDADAA+ AE W G A+G + +MLTLGTG+G + NG++ G +EGGHM+VE+ GR CGC Q GCLE Y SA A+ + +E H R G ++ E ++ VF+ A D L +VEE ADYLG C+ CR++DP +I+ +GG++ AG ++D ++ + + W PN V + A+ G DS G+ GA + +G+
Sbjct: 110 PVTVCNDADAAILAEQWVGTAKGDIKDFIMLTLGTGVGFGVVANGELVRGGSNAIEGGHMIVERNGRPCGCSQRGCLEAYSSAGALMSQVQE---------------------------------------------------HLRAGRDSSLAKYSEADINAEFVFKHAAE-------GDELCKHLVEEAADYLGFACVTFCRMLDPEIIVLSGGIAEAGEAYIDKIRRAYTKHTWTKFPNPVRIEKASAGYDS-GIIGAVAVCKKQRKGQ 322 The following BLAST results are available for this feature:
BLAST of EWM30065.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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