EWM30065.1, cds615 (CDS) Nannochloropsis gaditana

Overview
NameEWM30065.1
Unique Namecds615
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1537112..1538029 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30065.1
Productglucokinase
Orig transcript idgnl|cribi|Naga_100170g2.5474.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1537112..1538029 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR000600ROK
Homology
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|585112697|gb|EWM30065.1| (glucokinase [Nannochloropsis gaditana])

HSP 1 Score: 612.838 bits (1579), Expect = 0.000e+0
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0
Query:    1 MTERIKFSGKGRDRGAAVGEIFCPPIVLLNDADAALSAEMWAGAARGQLGVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVGVWGAARAASLRVRGKEDENISKEKK 305
            MTERIKFSGKGRDRGAAVGEIFCPPIVLLNDADAALSAEMWAGAARGQLGVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVGVWGAARAASLRVRGKEDENISKEKK
Sbjct:    1 MTERIKFSGKGRDRGAAVGEIFCPPIVLLNDADAALSAEMWAGAARGQLGVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVGVWGAARAASLRVRGKEDENISKEKK 305          
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|553188732|ref|XP_005854855.1| (glucokinase [Nannochloropsis gaditana CCMP526] >gi|422294209|gb|EKU21509.1| glucokinase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 598.201 bits (1541), Expect = 0.000e+0
Identity = 300/305 (98.36%), Postives = 301/305 (98.69%), Query Frame = 0
Query:    1 MTERIKFSGKGRDRGAAVGEIFCPPIVLLNDADAALSAEMWAGAARGQLGVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVGVWGAARAASLRVRGKEDENISKEKK 305
            MTERIKFSGKGRDRGAAVGEIFCPPIVLLNDADAALSAEMWAGAARGQLGVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRD DSEEESEADEVPFTSKDVFEAALSLGRN PPPDSLA+QVVEEVADYLGLGCLNLCRVVDP LILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVG WGAARAASLRVRGKEDENISKEKK
Sbjct:    1 MTERIKFSGKGRDRGAAVGEIFCPPIVLLNDADAALSAEMWAGAARGQLGVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDRDSEEESEADEVPFTSKDVFEAALSLGRNDPPPDSLAMQVVEEVADYLGLGCLNLCRVVDPDLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVGAWGAARAASLRVRGKEDENISKEKK 305          
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|635372549|emb|CCI39353.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 154.451 bits (389), Expect = 3.336e-41
Identity = 93/259 (35.91%), Postives = 135/259 (52.12%), Query Frame = 0
Query:   20 EIFCPPIVLLNDADAALSAEMWAGAARGQL-GVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGD 277
            E F   + +LNDADAA+ AE+W GAA+  +   +M+TLGTGIGV L ++GQ+  G+ GL+EGGHM++EK GR CGC Q GCLE Y SA+A+      +   K ++KA                                             G   + S+A +   T++ +F  A+         D + + +VEE ADYLG  C+NL R++DP LILF+GG++ AG  F+D+++     Y W   PN V  K ++ G D
Sbjct:  100 ERFDQRVEILNDADAAVLAELWVGAAKRDVQSFIMITLGTGIGVGLVIDGQLIRGAHGLLEGGHMIIEKDGRQCGCSQRGCLEAYASATAL------ISCAKMKLKA---------------------------------------------GTPTKLSDAHDQTITAEMIFGLAVK-------GDRMCMDIVEEAADYLGFACVNLSRILDPELILFSGGLAEAGNFFVDLIRKAAVKYSWTKFPNRVSIKRSSTGYD 300          
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|635372547|emb|CCI39351.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 157.147 bits (396), Expect = 6.209e-40
Identity = 93/259 (35.91%), Postives = 135/259 (52.12%), Query Frame = 0
Query:   20 EIFCPPIVLLNDADAALSAEMWAGAARGQL-GVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGD 277
            E F   + +LNDADAA+ AE+W GAA+  +   +M+TLGTGIGV L ++GQ+  G+ GL+EGGHM++EK GR CGC Q GCLE Y SA+A+      +   K ++KA                                             G   + S+A +   T++ +F  A+         D + + +VEE ADYLG  C+NL R++DP LILF+GG++ AG  F+D+++     Y W   PN V  K ++ G D
Sbjct:  402 ERFDQRVEILNDADAAVLAELWVGAAKRDVQSFIMITLGTGIGVGLVIDGQLIRGAHGLLEGGHMIIEKDGRQCGCSQRGCLEAYASATAL------ISCAKMKLKA---------------------------------------------GTPTKLSDAHDQTITAEMIFGLAVK-------GDRMCMDIVEEAADYLGFACVNLSRILDPELILFSGGLAEAGNFFVDLIRKAAVKYSWTKFPNRVSIKRSSTGYD 602          
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|635372546|emb|CCI39350.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 157.147 bits (396), Expect = 7.103e-40
Identity = 93/259 (35.91%), Postives = 135/259 (52.12%), Query Frame = 0
Query:   20 EIFCPPIVLLNDADAALSAEMWAGAARGQL-GVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGD 277
            E F   + +LNDADAA+ AE+W GAA+  +   +M+TLGTGIGV L ++GQ+  G+ GL+EGGHM++EK GR CGC Q GCLE Y SA+A+      +   K ++KA                                             G   + S+A +   T++ +F  A+         D + + +VEE ADYLG  C+NL R++DP LILF+GG++ AG  F+D+++     Y W   PN V  K ++ G D
Sbjct:  423 ERFDQRVEILNDADAAVLAELWVGAAKRDVQSFIMITLGTGIGVGLVIDGQLIRGAHGLLEGGHMIIEKDGRQCGCSQRGCLEAYASATAL------ISCAKMKLKA---------------------------------------------GTPTKLSDAHDQTITAEMIFGLAVK-------GDRMCMDIVEEAADYLGFACVNLSRILDPELILFSGGLAEAGNFFVDLIRKAAVKYSWTKFPNRVSIKRSSTGYD 623          
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|635372548|emb|CCI39352.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 156.762 bits (395), Expect = 8.333e-40
Identity = 93/259 (35.91%), Postives = 135/259 (52.12%), Query Frame = 0
Query:   20 EIFCPPIVLLNDADAALSAEMWAGAARGQL-GVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGD 277
            E F   + +LNDADAA+ AE+W GAA+  +   +M+TLGTGIGV L ++GQ+  G+ GL+EGGHM++EK GR CGC Q GCLE Y SA+A+      +   K ++KA                                             G   + S+A +   T++ +F  A+         D + + +VEE ADYLG  C+NL R++DP LILF+GG++ AG  F+D+++     Y W   PN V  K ++ G D
Sbjct:  389 ERFDQRVEILNDADAAVLAELWVGAAKRDVQSFIMITLGTGIGVGLVIDGQLIRGAHGLLEGGHMIIEKDGRQCGCSQRGCLEAYASATAL------ISCAKMKLKA---------------------------------------------GTPTKLSDAHDQTITAEMIFGLAVK-------GDRMCMDIVEEAADYLGFACVNLSRILDPELILFSGGLAEAGNFFVDLIRKAAVKYSWTKFPNRVSIKRSSTGYD 589          
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|325181090|emb|CCA15502.1| (glucokinase putative [Albugo laibachii Nc14])

HSP 1 Score: 152.525 bits (384), Expect = 1.451e-39
Identity = 88/251 (35.06%), Postives = 132/251 (52.59%), Query Frame = 0
Query:   28 LLNDADAALSAEMWAGAARGQL-GVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGD 277
            LLNDADAA+ AE+W GAA+  +   +M+TLGTGIGV + ++G++  G+RGL+EGGHM++EK GR C C Q GCLE Y SA+A+      + + K +++A                                             G     S+A     T++ +F+ A          D++ L +VEE AD LG  C+N  R++ P LILF+GG++ AG  FL+M++  ++ Y W   PN+V  + +T G D
Sbjct:  192 LLNDADAAVLAEIWVGAAKKVVENFIMITLGTGIGVGVVIDGRLIRGARGLLEGGHMIIEKNGRPCPCSQRGCLEAYASATAL------ISYAKMKLEA---------------------------------------------GTPSRLSQAHNESITAEMIFKLA-------EEGDTMCLGIVEEAADCLGFACVNFSRILYPELILFSGGLAEAGEFFLEMIRRAYSKYTWTKFPNEVSVRKSTAGYD 384          
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|953487817|emb|CEG48645.1| (glucokinase [Plasmopara halstedii])

HSP 1 Score: 145.206 bits (365), Expect = 1.392e-37
Identity = 92/279 (32.97%), Postives = 131/279 (46.95%), Query Frame = 0
Query:   21 IFCPPIVLLNDADAALSAEMWAGAAR-GQLGVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVGVWGAARAASLRVRGKEDE 298
            I   PI + NDADAA+ AE W G AR G    +MLTLGTG+G    +NG++  G    VEGGH++VE+ GR CGC Q GCLE Y SASA+  + +E                                                   H R G+    S+  E    ++ VF+ A          D L   ++E  ADYLG  C+  CR++DP +I+ +GG++ AG  +++ ++  +  Y W  LPN V  + A+ G DS G+ GA    + R + K  E
Sbjct:  101 ILDKPITVCNDADAAILAEQWVGTARSGVKDFIMLTLGTGVGFGAVVNGELVRGGNNAVEGGHIIVERNGRLCGCSQRGCLEAYSSASALIHQVQE---------------------------------------------------HLRAGEVSSVSQYLETQIDAELVFKLA-------SEGDELCQHLIESAADYLGFACVTFCRMLDPEIIVLSGGIAEAGESYIEKIRLAYAKYSWTRLPNPVRIEKASAGYDS-GIIGAVAVHACRKQLKTHE 320          
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|1214713977|gb|OWZ24853.1| (Glucokinase [Phytophthora megakarya])

HSP 1 Score: 144.821 bits (364), Expect = 2.335e-37
Identity = 90/272 (33.09%), Postives = 134/272 (49.26%), Query Frame = 0
Query:   25 PIVLLNDADAALSAEMWAGAARGQLG-VVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVGVWGAARAASLRVRGK 295
            P+ + NDADAA+ AE W G A+G +   +MLTLGTG+G  +  NGQ+  G    +EGGHM+VE+ GR CGC Q GCLE Y SA A+  +A+E              + G L                            +     RD      SEAD     ++ VF+ A          D L   ++EE ADYLG  C+  CR++DP +I+ +GG++ AG  +++ ++  +  + W   PN V  + A+ G DS G+ GA     ++ +G+
Sbjct:  110 PVTVCNDADAAILAEQWVGTAKGGIQDFIMLTLGTGVGFGVVANGQLVRGGSNAIEGGHMIVERNGRQCGCTQRGCLEAYSSAGALMSQAQE------------HLRAGVLLAV-------------------------VAVYWSRDSSLANYSEAD---INAEFVFKHA-------AEGDELCKHLIEEAADYLGFACVTFCRMLDPQIIVLSGGIAEAGETYIEQIRRAYEKHSWTKFPNPVRIEKASAGYDS-GIIGAVAVCRIQRKGQ 333          
BLAST of EWM30065.1 vs. NCBI_GenBank
Match: gi|301117420|ref|XP_002906438.1| (glucokinase, putative [Phytophthora infestans T30-4] >gi|262107787|gb|EEY65839.1| glucokinase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 142.895 bits (359), Expect = 1.191e-36
Identity = 86/272 (31.62%), Postives = 128/272 (47.06%), Query Frame = 0
Query:   25 PIVLLNDADAALSAEMWAGAARGQL-GVVMLTLGTGIGVALALNGQVWSGSRGLVEGGHMVVEKGGRACGCGQLGCLEMYVSASAVKRRAEELGFKKKRVKASDRGKTGCLRVSGDDKTVENRKERSAKIDIERQAKDDIGSSHRRDGDSEEESEADEVPFTSKDVFEAALSLGRNYPPPDSLALQVVEEVADYLGLGCLNLCRVVDPCLILFAGGMSGAGPLFLDMVKARFNFYGWRILPNDVDFKVATLGGDSVGVWGAARAASLRVRGK 295
            P+ + NDADAA+ AE W G A+G +   +MLTLGTG+G  +  NG++  G    +EGGHM+VE+ GR CGC Q GCLE Y SA A+  + +E                                                   H R G     ++  E    ++ VF+ A          D L   +VEE ADYLG  C+  CR++DP +I+ +GG++ AG  ++D ++  +  + W   PN V  + A+ G DS G+ GA      + +G+
Sbjct:  110 PVTVCNDADAAILAEQWVGTAKGDIKDFIMLTLGTGVGFGVVANGELVRGGSNAIEGGHMIVERNGRPCGCSQRGCLEAYSSAGALMSQVQE---------------------------------------------------HLRAGRDSSLAKYSEADINAEFVFKHAAE-------GDELCKHLVEEAADYLGFACVTFCRMLDPEIIVLSGGIAEAGEAYIDKIRRAYTKHTWTKFPNPVRIEKASAGYDS-GIIGAVAVCKKQRKGQ 322          
The following BLAST results are available for this feature:
BLAST of EWM30065.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112697|gb|EWM30065.1|0.000e+0100.00glucokinase [Nannochloropsis gaditana][more]
gi|553188732|ref|XP_005854855.1|0.000e+098.36glucokinase [Nannochloropsis gaditana CCMP526] >gi... [more]
gi|635372549|emb|CCI39353.1|3.336e-4135.91unnamed protein product [Albugo candida][more]
gi|635372547|emb|CCI39351.1|6.209e-4035.91unnamed protein product [Albugo candida][more]
gi|635372546|emb|CCI39350.1|7.103e-4035.91unnamed protein product [Albugo candida][more]
gi|635372548|emb|CCI39352.1|8.333e-4035.91unnamed protein product [Albugo candida][more]
gi|325181090|emb|CCA15502.1|1.451e-3935.06glucokinase putative [Albugo laibachii Nc14][more]
gi|953487817|emb|CEG48645.1|1.392e-3732.97glucokinase [Plasmopara halstedii][more]
gi|1214713977|gb|OWZ24853.1|2.335e-3733.09Glucokinase [Phytophthora megakarya][more]
gi|301117420|ref|XP_002906438.1|1.191e-3631.62glucokinase, putative [Phytophthora infestans T30-... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna615rna615Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications