EWM24524.1, cds6149 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24524.1 vs. NCBI_GenBank
Match: gi|585106029|gb|EWM24524.1| (fatty acid desaturase [Nannochloropsis gaditana]) HSP 1 Score: 336.265 bits (861), Expect = 5.654e-117 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
Query: 1 MVEQTLPTLSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPSVQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIFEVGRGGGREGGREGGRKGGRGEG 160
MVEQTLPTLSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPSVQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIFEVGRGGGREGGREGGRKGGRGEG
Sbjct: 1 MVEQTLPTLSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPSVQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIFEVGRGGGREGGREGGRKGGRGEG 160
BLAST of EWM24524.1 vs. NCBI_GenBank
Match: gi|1154501355|gb|AQX92138.1| (Om [Nannochloropsis oceanica]) HSP 1 Score: 283.493 bits (724), Expect = 1.417e-92 Identity = 126/138 (91.30%), Postives = 133/138 (96.38%), Query Frame = 0
Query: 1 MVEQTLPTLSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPSVQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIFE 138
MVEQTLPTLSQ+KKAIPEKCFQKSLLRS YYMLRDFAALAALY +YP+VQA +GL GLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKW ND+CGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMT+E+FE
Sbjct: 1 MVEQTLPTLSQIKKAIPEKCFQKSLLRSFYYMLRDFAALAALYFVYPTVQAKYGLPGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWLNDICGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTKEVFE 138
BLAST of EWM24524.1 vs. NCBI_GenBank
Match: gi|748396879|gb|KIH65868.1| (hypothetical protein ANCDUO_03809 [Ancylostoma duodenale]) HSP 1 Score: 171.785 bits (434), Expect = 2.096e-51 Identity = 74/133 (55.64%), Postives = 96/133 (72.18%), Query Frame = 0
Query: 6 LPTLSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPSVQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIFE 138
LPT+ ++KAIP CF+K+LL+SV Y+++D LA LY + P V+ G AG W + G LFV+GHDCGHGSFS Y+W ND+CGHI HAP++ PYWPWQKSHR HH Y +HL KD HPW+T+++FE
Sbjct: 54 LPTVDDVRKAIPPHCFEKNLLKSVRYLVQDLIVLACLYAVLPYVEQYLGWAGYLAWCCVFGICACSLFVVGHDCGHGSFSNYEWVNDLCGHIAHAPILAPYWPWQKSHRQHHQYTSHLDKDKGHPWVTEQVFE 186
BLAST of EWM24524.1 vs. NCBI_GenBank
Match: gi|732889152|gb|KHJ93340.1| (hypothetical protein OESDEN_06753 [Oesophagostomum dentatum]) HSP 1 Score: 163.31 bits (412), Expect = 1.588e-48 Identity = 70/133 (52.63%), Postives = 97/133 (72.93%), Query Frame = 0
Query: 6 LPTLSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPSVQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIFE 138
LPT+ +++KA+P CF+K+LL+S+ Y+++D+ LA LY+I P V+ + G G W G LFV+GHDCGHGSFSEY+W ND+CGHI HAP++ P+WPWQKSHR HH Y +HL KD HPW+T++ +
Sbjct: 11 LPTVDEVRKAVPAHCFEKNLLKSLRYLIQDYLILAFLYLILPYVEQHLGWVGYLAWCWAFGICGSALFVVGHDCGHGSFSEYEWVNDICGHIAHAPILAPFWPWQKSHRQHHQYTSHLEKDKGHPWVTEKDYN 143
BLAST of EWM24524.1 vs. NCBI_GenBank
Match: gi|597864141|gb|EYC13543.1| (hypothetical protein Y032_0043g777 [Ancylostoma ceylanicum]) HSP 1 Score: 169.474 bits (428), Expect = 1.655e-48 Identity = 75/133 (56.39%), Postives = 95/133 (71.43%), Query Frame = 0
Query: 6 LPTLSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPSVQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIFE 138
LPT+ ++KAIP CF+K+LL+SV Y+++D LA LY I P V+ G AG W + G LFV+GHDCGHGSFS Y+W ND+CGHI HAP++ PYWPWQKSHR HH Y +HL KD HPW+T++ FE
Sbjct: 23 LPTVDDVRKAIPPHCFEKNLLKSVRYLVQDLIVLACLYAILPYVEQYLGWAGYLAWCCVFGICACSLFVVGHDCGHGSFSNYEWVNDLCGHIAHAPILAPYWPWQKSHRQHHQYTSHLDKDKGHPWVTEQDFE 155
BLAST of EWM24524.1 vs. NCBI_GenBank
Match: gi|597864143|gb|EYC13545.1| (hypothetical protein Y032_0043g777 [Ancylostoma ceylanicum]) HSP 1 Score: 169.088 bits (427), Expect = 1.968e-48 Identity = 75/133 (56.39%), Postives = 95/133 (71.43%), Query Frame = 0
Query: 6 LPTLSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPSVQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIFE 138
LPT+ ++KAIP CF+K+LL+SV Y+++D LA LY I P V+ G AG W + G LFV+GHDCGHGSFS Y+W ND+CGHI HAP++ PYWPWQKSHR HH Y +HL KD HPW+T++ FE
Sbjct: 13 LPTVDDVRKAIPPHCFEKNLLKSVRYLVQDLIVLACLYAILPYVEQYLGWAGYLAWCCVFGICACSLFVVGHDCGHGSFSNYEWVNDLCGHIAHAPILAPYWPWQKSHRQHHQYTSHLDKDKGHPWVTEQDFE 145
BLAST of EWM24524.1 vs. NCBI_GenBank
Match: gi|597864142|gb|EYC13544.1| (hypothetical protein Y032_0043g777 [Ancylostoma ceylanicum]) HSP 1 Score: 169.859 bits (429), Expect = 2.496e-48 Identity = 75/133 (56.39%), Postives = 95/133 (71.43%), Query Frame = 0
Query: 6 LPTLSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPSVQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIFE 138
LPT+ ++KAIP CF+K+LL+SV Y+++D LA LY I P V+ G AG W + G LFV+GHDCGHGSFS Y+W ND+CGHI HAP++ PYWPWQKSHR HH Y +HL KD HPW+T++ FE
Sbjct: 54 LPTVDDVRKAIPPHCFEKNLLKSVRYLVQDLIVLACLYAILPYVEQYLGWAGYLAWCCVFGICACSLFVVGHDCGHGSFSNYEWVNDLCGHIAHAPILAPYWPWQKSHRQHHQYTSHLDKDKGHPWVTEQDFE 186
BLAST of EWM24524.1 vs. NCBI_GenBank
Match: gi|732882259|gb|KHJ90840.1| (stearoyl-CoA 9-desaturase [Oesophagostomum dentatum]) HSP 1 Score: 164.466 bits (415), Expect = 2.165e-47 Identity = 71/133 (53.38%), Postives = 97/133 (72.93%), Query Frame = 0
Query: 6 LPTLSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPSVQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIFE 138
LPT+ +++KA+P CF+K+LL+S+ Y+++D+ LA LYII P V+ + G G W G LFV+GHDCGHGSFSEY+W ND+CGHI HAP++ P+WPWQKSHR HH Y +HL KD HPW+T++ +
Sbjct: 11 LPTVDEVRKAVPAHCFEKNLLKSLRYLIQDYLILAFLYIILPYVEQHLGWVGYLAWCWAFGICGSALFVVGHDCGHGSFSEYEWVNDICGHIAHAPILAPFWPWQKSHRQHHQYTSHLEKDKGHPWVTEKDYN 143
BLAST of EWM24524.1 vs. NCBI_GenBank
Match: gi|541048972|gb|ERG87666.1| (omega-3 fatty acid endoplasmic reticulum [Ascaris suum]) HSP 1 Score: 160.614 bits (405), Expect = 3.533e-47 Identity = 71/132 (53.79%), Postives = 98/132 (74.24%), Query Frame = 0
Query: 6 LPTLSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPSVQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQEIF 137
LPT+ +++A+P +CF++SL +S+++++ D A LA+LY+ S +FG+AGL +W+ L G F LFV+GHDCGHG+FSEY ND GHI HAPL+ PYWPWQKSHR HH Y +H+ KD HPW+T+E F
Sbjct: 19 LPTIDAIRRAVPAQCFERSLPKSLFFLVLDLAILASLYLAV-SYFEHFGIAGLLLWYWLMGMFGSSLFVVGHDCGHGTFSEYTIVNDFFGHIAHAPLLAPYWPWQKSHRQHHQYTSHIDKDKGHPWITEEEF 149
BLAST of EWM24524.1 vs. NCBI_GenBank
Match: gi|915251322|ref|XP_013296756.1| (stearoyl-CoA 9-desaturase [Necator americanus] >gi|568281728|gb|ETN74529.1| stearoyl-CoA 9-desaturase [Necator americanus]) HSP 1 Score: 162.925 bits (411), Expect = 6.340e-46 Identity = 70/130 (53.85%), Postives = 91/130 (70.00%), Query Frame = 0
Query: 6 LPTLSQLKKAIPEKCFQKSLLRSVYYMLRDFAALAALYIIYPSVQANFGLAGLFVWWNLAGFFMWCLFVIGHDCGHGSFSEYKWFNDVCGHICHAPLMVPYWPWQKSHRLHHMYHNHLTKDMSHPWMTQE 135
LPT+ ++K +P CF+K L++S+ Y+++D L LY I P V+ FG G W GF LFV+GHDCGHGSFS+Y+W ND+CGHI HAPL+ PYWPWQKSHR HH Y +HL KD HPW+T++
Sbjct: 23 LPTVDDVRKVVPPHCFEKKLVKSISYLVQDLIVLVGLYAILPYVEQYFGWVGYLAWCWAFGFCGCSLFVVGHDCGHGSFSDYEWVNDICGHIAHAPLLAPYWPWQKSHRQHHQYTSHLDKDKGHPWVTEK 152 The following BLAST results are available for this feature:
BLAST of EWM24524.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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