EWM24528.1, cds6145 (CDS) Nannochloropsis gaditana

Overview
NameEWM24528.1
Unique Namecds6145
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:740845..741873 +
Alignment locationCM002467.1:742152..742248 +
Alignment locationCM002467.1:742397..743274 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24528.1
Productphytoene dehydrogenase
Orig transcript idgnl|cribi|Naga_100427g4.10032.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:740845..741873 +
CM002467.1supercontigCM002467.1:742152..742248 +
CM002467.1supercontigCM002467.1:742397..743274 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR006076FAD-dep_OxRdtase
Homology
BLAST of EWM24528.1 vs. NCBI_GenBank
Match: gi|585106035|gb|EWM24528.1| (phytoene dehydrogenase [Nannochloropsis gaditana] >gi|585106036|gb|EWM24529.1| phytoene dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 1362.44 bits (3525), Expect = 0.000e+0
Identity = 667/667 (100.00%), Postives = 667/667 (100.00%), Query Frame = 0
Query:    1 MKSTPWIPPSSSVPGRPRPRVYLLISCLLLLFILEVYTFLTTQVLRESSVTISHNKFRLQSRISALPPKQIVVIGAGIGGLVTAGRLARATRGRNVSITIVEKNDRESAGGRLGEYTWEGHRWETGPSLLLLPDVYMEIFEHLGGSFPSASNSTTERTSKDDMTRTSAVKCGGGRWERQAEPPIASGGSVSDGIGPSRLTKVEPSYLVIFGDNDRLELYSNRSRMVEAINRLEPGGFPRYQDYLESAQNNLDFGLSAFIKESPQWEYFPAFCRNLNLNARFWPLASHHRQLEGLFDSKKLQAALSFQDLYVGLTPYEAPAVFSLLQAIELNQGVFYPLGGFAQVSRELLRLVEANGVCCLFDSPVAEILVESAGTGLRTRGVRLQNHHVLPADLVVSNVDLPYTNKYLFSRLHAQSKDHDTRGFSSSVISFLWAFDRPLPSLRHHTTFLAAREEEVEAEGGRKEGGRSGAKEGIDPAKAAWEAVFKDKRFDGRFLNFYVHAPARTDTSVCPPGHDAVMVLVPCPVLGKEGGGQEEEEEEARMIADAREAVLARFESVMRMEDVRDSLIHERVIGPREWREKYSLSRGAVFGLKHDLGQLSVLRPGRKHVGGRKRLGEGGKEEGREGGGAIEGMYYCGASSRPGNGVPLVMVGAKLLSEMILQECFPE 667
            MKSTPWIPPSSSVPGRPRPRVYLLISCLLLLFILEVYTFLTTQVLRESSVTISHNKFRLQSRISALPPKQIVVIGAGIGGLVTAGRLARATRGRNVSITIVEKNDRESAGGRLGEYTWEGHRWETGPSLLLLPDVYMEIFEHLGGSFPSASNSTTERTSKDDMTRTSAVKCGGGRWERQAEPPIASGGSVSDGIGPSRLTKVEPSYLVIFGDNDRLELYSNRSRMVEAINRLEPGGFPRYQDYLESAQNNLDFGLSAFIKESPQWEYFPAFCRNLNLNARFWPLASHHRQLEGLFDSKKLQAALSFQDLYVGLTPYEAPAVFSLLQAIELNQGVFYPLGGFAQVSRELLRLVEANGVCCLFDSPVAEILVESAGTGLRTRGVRLQNHHVLPADLVVSNVDLPYTNKYLFSRLHAQSKDHDTRGFSSSVISFLWAFDRPLPSLRHHTTFLAAREEEVEAEGGRKEGGRSGAKEGIDPAKAAWEAVFKDKRFDGRFLNFYVHAPARTDTSVCPPGHDAVMVLVPCPVLGKEGGGQEEEEEEARMIADAREAVLARFESVMRMEDVRDSLIHERVIGPREWREKYSLSRGAVFGLKHDLGQLSVLRPGRKHVGGRKRLGEGGKEEGREGGGAIEGMYYCGASSRPGNGVPLVMVGAKLLSEMILQECFPE
Sbjct:    1 MKSTPWIPPSSSVPGRPRPRVYLLISCLLLLFILEVYTFLTTQVLRESSVTISHNKFRLQSRISALPPKQIVVIGAGIGGLVTAGRLARATRGRNVSITIVEKNDRESAGGRLGEYTWEGHRWETGPSLLLLPDVYMEIFEHLGGSFPSASNSTTERTSKDDMTRTSAVKCGGGRWERQAEPPIASGGSVSDGIGPSRLTKVEPSYLVIFGDNDRLELYSNRSRMVEAINRLEPGGFPRYQDYLESAQNNLDFGLSAFIKESPQWEYFPAFCRNLNLNARFWPLASHHRQLEGLFDSKKLQAALSFQDLYVGLTPYEAPAVFSLLQAIELNQGVFYPLGGFAQVSRELLRLVEANGVCCLFDSPVAEILVESAGTGLRTRGVRLQNHHVLPADLVVSNVDLPYTNKYLFSRLHAQSKDHDTRGFSSSVISFLWAFDRPLPSLRHHTTFLAAREEEVEAEGGRKEGGRSGAKEGIDPAKAAWEAVFKDKRFDGRFLNFYVHAPARTDTSVCPPGHDAVMVLVPCPVLGKEGGGQEEEEEEARMIADAREAVLARFESVMRMEDVRDSLIHERVIGPREWREKYSLSRGAVFGLKHDLGQLSVLRPGRKHVGGRKRLGEGGKEEGREGGGAIEGMYYCGASSRPGNGVPLVMVGAKLLSEMILQECFPE 667          
BLAST of EWM24528.1 vs. NCBI_GenBank
Match: gi|298706838|emb|CBJ25802.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 364.77 bits (935), Expect = 4.612e-114
Identity = 232/599 (38.73%), Postives = 307/599 (51.25%), Query Frame = 0
Query:   83 TAGRLARATRGRNVSITIVEKNDRESAGGRLGEYTWEG-HRWETGPSLLLLPDVYMEIFEHLGGSFPSASNSTTERTSKDDMTRTSAVKCGGGRWERQAEPPIASGGSVSDGIGPSRLTKVEPSYLVIFGDNDRLELYSNRSRMVEAINRLEPGGFPRYQDYLESAQNNLDFGLSAFIKESPQWEYFPAFCRNLNLNARFWPLASHHRQLEGLFDSKKLQAALSFQDLYVGLTPYEAPAVFSLLQAIELNQGVFYPLGGFAQVSRELLRLVEANGVCCLFDSPVAEILVESAGTGLRTRGVRLQNHHVLPADLVVSNVDLPYTNKYLFSRLHAQSKDHDTRGFSSSVISFLWAFDRPLPSLRHHTTFLAAREEEVEAEGGRKEGGRSGAKEGIDPAKAAWEAVFKDKRFD--GRFLNFYVHAPARTDTSVCPPGHDAVMVLVPCPVL----------------GKEGGGQEEEEEEARMIADAREAVLARFESVMRMEDVRDSLIHERVIGPREWREKYSLSRGAVFGLKHDLGQLSVLRPGRKHVGGRKRLGEGGKEEGREGGGAIEGMYYCGASSRPGNGVPLVMVGAKLLSEMILQ 662
            TA RLA+A       +T+VEKN  E  GGRL E   EG  R++TGPSLLLLP+ Y E F  LG            R S +                                     + +V P+Y V F D + ++L  +   +   ++RLE GGF +Y+ YL+ AQ NL+ GL  FI+E       P F      N+   PL +H+ QL   FD+ K++A LSFQDLYVGL+PY APAVFSLLQAIEL  GV+YP GGFA+V   L  +    GV   FDSPV+E+ V   G  + ++GV L +  +L AD VV N DLPY  K L     + S+  +   +S+SVI+F    +R  P L HHT FL+                           KA+W++ F        G   NFY  APARTD SVCP G DA+MVLVPCP +                 +EGGG + E+     +  ARE V+   E+   ME   DS++ E V  P  WR++Y+L RGAVFGL H L QLS+LRPG +H                     + G+++CGASSRPGNGVPLV++GAK ++  +L+
Sbjct:  111 TAARLAKA----GCRVTVVEKNSEEDIGGRLNELVMEGGFRFDTGPSLLLLPETYRETFAELG------------RDSDEFF----------------------------------EMRRVSPTYKVYFDDGESVDLSDDEEDLRRQMDRLEDGGFDKYKAYLDGAQLNLEVGLPNFIEEKFTPGRLPEFALGALFNS---PLENHYGQLSRRFDNPKMRALLSFQDLYVGLSPYNAPAVFSLLQAIELRDGVYYPTGGFARVGEALGTVCRDLGVKFRFDSPVSEVSVVGEGGRVNSKGVVLASGELLEADAVVCNADLPYAEKALLP--DSVSRSFENSEYSTSVIAFYLCSNRRWPQLSHHTVFLST------------------------DWKASWDSAFGKLPGGELGESFNFYAAAPARTDPSVCPEGSDAIMVLVPCPSIPDDYTGKIDDGGSGNDTREGGGPDRED----WVRRAREGVIREMEASAGMEGFGDSIVGEEVYAPWNWRDRYNLRRGAVFGLSHGLNQLSLLRPGPQHP-------------------TVNGLWFCGASSRPGNGVPLVLIGAKQVAANVLK 607          
BLAST of EWM24528.1 vs. NCBI_GenBank
Match: gi|873225900|emb|CEM22660.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 360.147 bits (923), Expect = 7.571e-112
Identity = 226/637 (35.48%), Postives = 324/637 (50.86%), Query Frame = 0
Query:   70 QIVVIGAGIGGLVTAGRLARATRGRNVSITIVEKNDRESAGGRLGEYTWEGH----RWETGPSLLLLPDVYMEIFEHLGGSFPSASNSTTERTSKDDMTRTSAVKCGGGRWERQAEPPIASGGSVSDGIGPSRLTKVEPSYLVIFGDNDRLEL-YSNRSRMVEAINRLEPGGFPRYQDYLESAQNNLDFGLSAFIKESPQWEYFPAFCRNLNLNARFWPLASHHRQLEGLFDSKKLQAALSFQDLYVGLTPYEAPAVFSLLQAIELNQGVFYPLGGFAQVSRELLRLVEANGVCCLFDSPVAEILVES---AGTGLRTRGVRL-------------------------QNHHVLPADLVVSNVDLPYTNKYLF-------SRLHAQSKDHDTRGFSSSVISFLWAFDRPLPSLRHHTTFLAAREEEVEAEGGRKEGGRSGAKEGIDPAKAAWEAVF---KDKRFDGRFLNFYVHAPARTDTSVCPPGHDAVMVLVPCPVLGKEGGGQEEEEEEARMIADAREAVLARFESVMRMEDVRDSLIHERVIGPREWREKYSLSRGAVFGLKHDLGQLSVLRPGRKHVGGRKRLGEGGKEEGREGGGAIEGMYYCGASSRPGNGVPLVMVGAKLLSEMILQE 663
            + +V+GAGIGGLVTAGRLAR        +T++EKN     GGR+GE   E      R++TG SL L+P+++ E F  LG +   A +                                              L KVEP Y++ + D   L L  SNR+ + E +++LE  G+ ++  YL++A  N  FG+  FI+    ++   AF ++L      WPL+SHH +    F + KLQA ++FQDLYVGL+PY APAVFSLLQAIE  QGVFYP+GG+  V+++LL++V + GV   F++ V EILV     + +G    GV +                         +   ++ +D+VV N DLP+  ++L        S   +  +D     +S+SV++  W+F   LP L HH  FL++                          + +W ++F    +  F+    NFYVHA +RTD S CP G D +MVLVP P L +     E++    R ++DARE VL R E+V  ME++R SL+HE V  P +W+  Y+L RGAVFGL H L QL + RPG KH                     I  +Y  GAS+RPGNGVPLV+VGAK  +E I+++
Sbjct:   72 KCIVVGAGIGGLVTAGRLAR----EGFDVTVLEKNSEAMVGGRVGEELVETSKGRFRFDTGASLFLMPEIFEETFSSLGVALHDAID----------------------------------------------LRKVEPPYMIFYEDGTALNLTMSNRALLKEQLDQLEDDGYDKFMRYLDAADGNRLFGVPNFIQFEFSFDSINAFLKSL---LSMWPLSSHHTEAGRFFSNPKLQALVTFQDLYVGLSPYSAPAVFSLLQAIEFKQGVFYPVGGYHTVAKKLLQIVRSLGVKVHFNTNVKEILVSRTLLSPSGYEAEGVLIDKPGRDDEAAKLEASLPRSRLRDMGKTAMMVSSDIVVVNADLPFAEEHLLKTPPALPSFAPSIGRDFSQWDYSTSVVALYWSFKDRLP-LNHHNIFLSSE------------------------YRTSWASLFDTTSNAAFNASAFNFYVHASSRTDPSACPEGCDNIMVLVPVPALDERMSADEQQRLVDRTVSDAREGVLRRMEAVPGMENIRSSLLHEFVRSPMDWKRLYNLRRGAVFGLAHPLRQLVIFRPGPKH-------------------PTIGNLYAVGASARPGNGVPLVLVGAKQTAERIVKD 611          
BLAST of EWM24528.1 vs. NCBI_GenBank
Match: gi|676389039|ref|XP_009037798.1| (hypothetical protein AURANDRAFT_1353, partial [Aureococcus anophagefferens] >gi|323451418|gb|EGB07295.1| hypothetical protein AURANDRAFT_1353, partial [Aureococcus anophagefferens])

HSP 1 Score: 322.398 bits (825), Expect = 6.989e-99
Identity = 226/608 (37.17%), Postives = 294/608 (48.36%), Query Frame = 0
Query:   81 LVTAGRLARATRGRNVSITIVEKNDRESAGGRLGEYTWEGHRWETGPSLLLLPDVYMEIFEHLGGSFPSASNSTTERTSKDDMTRTSAVKCGGGRWERQAEPPIASGGSVSDGIGPSRLTKVEPSYLVIFGDN-DRLELY---SNRSRMVEAINRLEPGGFPRYQDYLESAQNNLDFGLSAFIKESPQWE---YFPAFCRNLNLNARFWPLASHHRQLEGLF-DSKKLQAALSFQDLYVGLTPYEAPAVFSLLQAIELNQ------------GVFYPLGGFAQVSRELLRLVEANGVCCLFDSPVAEILVESAGTGLRTRGVRLQNHHVLPADLVVSNVDLPYTNKYLFSRLHAQSKD-HDTRGFSSSVISFLWAFDRPLPSLRHHTTFLAAREEEVEAEGGRKEGGRSGAKEGIDPAKAAWEAVFKDK----RFDGRFLNFYVHAPARTDTSVCPPGHDAVMVLVPCPVLGKEGGGQEEEEEEARMIADAREAVLARFESVMRMEDVRDSLIHERVIGPREWREKYSLSRGAVFGLKHDLGQLSVLRPGRKHVGGRKRLGEGGKEEGREGGGAIEGMYYCGASSRPGNGVPLVMVGAKLLSEMILQE 663
            L TAGRL R         T++EKN  E  GGR+GE+ WEGHRWETG SLLLLPDVY    E                                           A+GG++ D +      +V+P+Y V F ++ DR  +     +R  +   +    PG F R++ Y   A+  L  G   FI+E   +      P F  N   +   WPL  H  QL  LF +S +L+A  SF DLYVGL+PYEAPAVFSLL AIEL+             GV+YP GGF  V   L R  EA+GV     + V ++LV       R  GVRLQ+   L AD VV N DL  T   L S     ++  ++   +S+S I+FLWA D  LP LRHH  FLA                   A  G DP + AW+    ++    RF GR  +FY+ AP+RTD +  P G D +MVLVP P L ++G    ++      IA AR+ V A         DV   ++HERVI PREWR+   L  G+VFGL H L QL++ RP R+      R+G               G+ + GAS+RPGNGVPLV+  AKLL   +  E
Sbjct:   14 LATAGRLQRL----GAECTVLEKN--EKLGGRVGEHRWEGHRWETGASLLLLPDVYRRALE-------------------------------------------AAGGAMVDAV------RVDPAYAVWFREHADRGPVVLGGGDRGALRARLELEAPGAFERFERYGACAREYLRAGWPIFIEEDLSFSGLATLPRFLANALSDLWRWPLFGHDAQLRRLFPESARLRALCSFDDLYVGLSPYEAPAVFSLLAAIELDDAGVVDDPPRRDVGVYYPRGGFGTVVDALTRACEASGVALRTRAAVDQVLVADG----RATGVRLQDGETLDADYVVVNGDLATTEPALLSETTGAARSAYERERYSTSSITFLWALDAALPQLRHHNVFLAE------------------AGNGDDPFRVAWDDQLPERGRRSRFPGRGFHFYLCAPSRTDATAAPEGKDTLMVLVPTPPLAEDGSDPVDD-----WIAAARDGVFAALRDSAGCGDVAGHVVHERVIDPREWRDGLGLRHGSVFGLAHGLDQLAIFRPSRRSA----RVG---------------GLAFVGASTRPGNGVPLVLTSAKLLCAELEDE 520          
BLAST of EWM24528.1 vs. NCBI_GenBank
Match: gi|1084610838|gb|OGO63958.1| (hypothetical protein A2Z45_04835 [Chloroflexi bacterium RBG_19FT_COMBO_55_16])

HSP 1 Score: 287.73 bits (735), Expect = 6.480e-86
Identity = 193/596 (32.38%), Postives = 285/596 (47.82%), Query Frame = 0
Query:   72 VVIGAGIGGLVTAGRLARATRGRNVSITIVEKNDRESAGGRLGEYTWEGHRWETGPSLLLLPDVYMEIFEHLGGSFPSASNSTTERTSKDDMTRTSAVKCGGGRWERQAEPPIASGGSVSDGIGPSRLTKVEPSYLVIFGDNDRLELYSNRSRMVEAINRLEPGGFPRYQDYLESAQNNLDFGLSAFIKES--PQWEYF-PAFCRNLNLNARFWPLASHHRQLEGLFDSKKLQAALSFQDLYVGLTPYEAPAVFSLLQAIELNQGVFYPLGGFAQVSRELLRLVEANGVCCLFDSPVAEILVESAGTGLRTRGVRLQNHHVLPADLVVSNVDLPYTNKYLFSRLHAQSKDHDTRGFSSSVISFLWAFDRPLPSLRHHTTFLAAREEEVEAEGGRKEGGRSGAKEGIDPAKAAWEAVFKDKRFDGRFLNFYVHAPARTDTSVCPPGHDAVMVLVPCPVLGKEGGGQEEEEEEARMIADAREAVLARFESVMRMEDVRDSLIHERVIGPREWREKYSLSRGAVFGLKHDLGQLSVLRPGRKHVGGRKRLGEGGKEEGREGGGAIEGMYYCGASSRPGNGVPLVMVGAKLLSEMILQEC 664
            +VIGAGIGG+  A RLA+    +   +T+VEKN    AGGR G   ++GHR++TGP+L L+P+V+ E +  LG                              R E                     L +V+P+Y + F D   + + ++ +RM   +  +EPG F  Y  YL     +    L  F+  +    ++YF PA   NL L  +   L  H+  L   F    L+AAL+FQ++Y+GL+PY+APA +SLLQ  EL  GV++P GG  QV   L+ + E+ GV  L+D+PV  I V          GVRL +   L AD++V+N DLPY  + L  +    S+  D R ++ S I+F W  ++  P L+ H  FL+                           +A+++ +F D        +FYVHAPAR D S  P G D +MVLVP   L       E+ +    ++  AR AVL+R  S +   D+  ++  E V  P+ W+  Y+L  GA FGL HD  Q+  LRP  +H   R                    +Y+ GAS+ PG G+P+V++ A+L SE I +E 
Sbjct:   10 LVIGAGIGGIAVAARLAQ----QGYQVTVVEKN--AEAGGRCGRLLFDGHRFDTGPTLFLMPEVFAETYTALGQ-----------------------------RMEEHLS-----------------LHRVDPTYRIRFSDGVEMSMTADLNRMKTQLEAIEPGSFGGYLSYLNEGHRHYKTSLERFVGRNFYSLFDYFSPA---NLPLLFQLKALKKHYSNLGNYFTDPHLKAALTFQNMYLGLSPYDAPATYSLLQYTELADGVWFPAGGLYQVIESLVSIAESLGVQFLYDTPVEAIEVNRN----HATGVRLNDGRRLAADVIVANADLPYVYQNLLPKSTLGSRLEDGR-YTCSAITFYWGINKVYPQLQPHNVFLSTD------------------------YRASFDRIFHDHTLPDE-PSFYVHAPARIDPSAAPQGQDTLMVLVPVGHLNS-----EQPQNMVALVKAARSAVLSRL-SQIGTPDLEQNIKFEVVYTPKTWQNLYNLVHGAAFGLSHDFWQVGYLRPKNRHQRYRN-------------------LYFVGASTHPGTGLPIVLLSARLTSERIFKEI 495          
BLAST of EWM24528.1 vs. NCBI_GenBank
Match: gi|397613236|gb|EJK62100.1| (hypothetical protein THAOC_17301, partial [Thalassiosira oceanica])

HSP 1 Score: 285.419 bits (729), Expect = 5.601e-83
Identity = 220/676 (32.54%), Postives = 320/676 (47.34%), Query Frame = 0
Query:   60 QSRI---SALPP-------KQIVVIGAGIGGLVTAGRLARATRGRNVSITIVEKNDRESAGGRLGEY------TWEGHRWETGPSLLLLPDVYMEIFEHLGGSFPSASNSTTERTSKDDMTRTSAVKCGGGRWERQAEPPIASGGSVSDGIGPSRLTKVEPSYLVIFGDNDRLE---------LYSNRSRMVEAI--------NRLEPGGFPRYQDYLESAQNNLDFGLSAFIKESPQWEYFPAFC-RNLNLNARFWPLASHHRQLEGLFDSKKLQAALSFQDLYVGLTPY-------------EAPAVFSLLQAIELN-----QGVFYPLGGFAQVSRELLRLVEANGVCCLFDSPVAEILVESAGTGLRTRGVRLQNHHVLPADLVVSNVDLPYTNKYLFSR----LHAQSKD-HDTRGFSSSVISFLWAFDRPLPSLRHHTTFLAAR--EEEVEAEGGRKEGGRSGAKEGIDPAKAAWEAVFKDKRFDGRFLNFYVHAPARTDTSVCPPGHDAVMVLVPCPVLGKEGGGQEEEEE----------EARMIADAREAVLARFESVMRMEDVRDSLIHERVIGPREWREKYSLSRGAVFGL----KHDLGQLSVLRPGRKHVGGRKRLGEGGKEEGREGGGAIEGMYYCGASSRPGNGVPLVMVGAKLLSEMILQ 662
            +SRI   S LPP       +++ ++GAG+GGL TA R+A A    N ++TI+EKNDR+ AGGR+G +          +R E GPSLLLL D Y ++FE  G    ++S  T  ++   DM                                     +  P+Y V+F D DR+          L +N    ++ +        N  EP G  ++ +YL++    LD GL  FI+E  +   FPAF    +    + WPL  H   L  LF+S K+ A  SFQDLYVGL PY              APAVF LL AIEL+      GVF PLGGF QV++ ++ L   NGV  +F++ V  I     G G+  R     ++    ADLV+ N D+PY ++ L +     ++ ++ D  D+  FSS V++F W+  + L +L  H  F+++   E+ + +    +EG RS          A+      D+ F     NFYVH  + TD S CP G DA+MVLVPCP L +         E          ++ ++ D R+AV+ R   +  +E + D +I E V  P  +   Y+L  G  FGL     H L QLS+ RPG +            K  G E         + GAS RPGNGVPLV++G++ +S   ++
Sbjct:   90 RSRIDGSSQLPPLFSTPESQKVCIVGAGVGGLATASRIASAMP--NATVTILEKNDRDLAGGRMGSFDAFVDGASGSYRHERGPSLLLLRDEYEKLFEDCGKR--TSSEGTQAKSYGLDMK------------------------------------QCVPAYQVVFDDGDRVSVGFPRNTSGLTANDIEQIQVLEQESMDRMNEWEPNGHKKWVEYLDTCAAYLDCGLPNFIEEKLELTSFPAFIWEAMREKGKRWPLKPHSSVLSELFESPKMVALASFQDLYVGLEPYLNQKQPLGGILRKTAPAVFGLLSAIELHPTNRRAGVFAPLGGFRQVAKSMVELCADNGVEFVFNATVTNI----GGGGVHFR--HGSSNMFRNADLVICNADIPYASESLINEHKDDVYRETYDWDDSFDFSSGVVAFHWSISKSLRALATHNVFMSSNNTEDAIGSWSVLREGSRS----------ASEATTLIDQPF-----NFYVHRASATDRSACPSGCDAIMVLVPCPALERNKDIASLSREDVMSTYAGQFDSNVLDDYRKAVIKRLSVLEGLEGLGDYIIDEVVDTPATYASHYNLGAGVPFGLVSDQSHGLSQLSLTRPGAEW-----------KNRGNE-------FMFVGASGRPGNGVPLVLIGSEQVSRKAVE 686          
BLAST of EWM24528.1 vs. NCBI_GenBank
Match: gi|317155223|ref|XP_001824518.2| (phytoene dehydrogenase [Aspergillus oryzae RIB40])

HSP 1 Score: 270.781 bits (691), Expect = 3.909e-79
Identity = 180/561 (32.09%), Postives = 273/561 (48.66%), Query Frame = 0
Query:  110 GGRLGEYTWEGHRWETGPSLLLLPDVYMEIFEHLGGSFPSASNSTTERTSKDDMTRTSAVKCGGGRWERQAEPPIASGGSVSDGIGPSRLTKVEPSYLVIFGDNDRLELYSNRSRMVEAINRLE-PGGFPRYQDYLESAQNNLDFGLSAFIKESPQWEYFPAFCRNLNLNA-----RFWPLASHHRQLEGLFDSKKLQAALSFQDLYVGLTPYEAPAVFSLLQAIELNQGVFYPLGGFAQVSRELLRLVEANGVCCLFDSPVAEILVESAGTGLRTRGVRLQNHHVLPADLVVSNVDLPYTNKYLFSRLHAQSKDHDTRGFSSSVISFLWAFDRPLPSLRHHTTFLAAREEEVEAEGGRKEGGRSGAKEGIDPAKAAWEAVFKDKRF-DGRFLNFYVHAPARTDTSVCPPGHDAVMVLVPCPVLGKEGGGQEEEEEEARMIADAREAVLARFESVMRMEDVRDSLIHERVIGPREWREKYSLSRGAVFGLKHDLGQLSVLRPGRKHVGGRKRLGEGGKEEGREGGGAIEGMYYCGASSRPGNGVPLVMVGAKLLSEMILQE 663
            GGR    + +G+R++ GPSLLL+ +V+ E F+ LG S    +                                              RL K EP+Y V F D D +EL +N +R+   I   E P GFPR+  +L  A  + +  L+  ++++     FP F   L  +         P  S + +    F S+K++   +F  +Y+G++PY AP  +SLLQ IE   G++YP GGF +V R L  +   +GV  + +SPV  +L++ +   ++  GV L++   L ADLVV N DL Y    L  +   +S D   R  S S ISF W+FD  LP LR H  FLA +  E                        +++A+F+D R  DG   +FYV+ P++ D +  PPG +AV+VLVP   L  E GGQ EEE+   +++  RE VL   E+   ++D+R  L+HE V  P  W E+++L RGA+ GL H    +   RP  KH                     IE +Y+ GAS+ PG GVP+ + G+KL+++ I+++
Sbjct:   34 GGRCSIISKDGYRFDQGPSLLLMREVFEETFQDLGTSLEQEN---------------------------------------------VRLVKCEPNYCVWFPDKDIIELSTNLTRLKAQIQHHEGPDGFPRFCAFLNEAGTHYNLSLAHVLRKN-----FPGFLSLLRWDVLRSLISMHPWTSTYSRAARYFYSEKMRRVWTFGSMYLGMSPYRAPGTYSLLQYIETVDGIWYPEGGFQRVLRALGDIGMRSGVEYILNSPVKSVLLDDSNHVVK--GVLLEDGEELYADLVVINADLVYAYNELLPKTR-RSHDLKKRPVSCSSISFFWSFDEKLPHLRAHNIFLAEKYRE------------------------SFDAIFEDHRIPDGP--SFYVNVPSKIDPTAAPPGKEAVVVLVPVGHLTSEKGGQLEEEKWDTLVSQTREIVLDTIEARTGLQDLRSRLVHEMVETPLSWEERFNLDRGAILGLSHSFFNVLSFRPQIKH-------------------PDIERLYFVGASTHPGTGVPVCLAGSKLVTQQIVED 496          
BLAST of EWM24528.1 vs. NCBI_GenBank
Match: gi|83773258|dbj|BAE63385.1| (unnamed protein product [Aspergillus oryzae RIB40])

HSP 1 Score: 270.781 bits (691), Expect = 5.255e-79
Identity = 180/561 (32.09%), Postives = 273/561 (48.66%), Query Frame = 0
Query:  110 GGRLGEYTWEGHRWETGPSLLLLPDVYMEIFEHLGGSFPSASNSTTERTSKDDMTRTSAVKCGGGRWERQAEPPIASGGSVSDGIGPSRLTKVEPSYLVIFGDNDRLELYSNRSRMVEAINRLE-PGGFPRYQDYLESAQNNLDFGLSAFIKESPQWEYFPAFCRNLNLNA-----RFWPLASHHRQLEGLFDSKKLQAALSFQDLYVGLTPYEAPAVFSLLQAIELNQGVFYPLGGFAQVSRELLRLVEANGVCCLFDSPVAEILVESAGTGLRTRGVRLQNHHVLPADLVVSNVDLPYTNKYLFSRLHAQSKDHDTRGFSSSVISFLWAFDRPLPSLRHHTTFLAAREEEVEAEGGRKEGGRSGAKEGIDPAKAAWEAVFKDKRF-DGRFLNFYVHAPARTDTSVCPPGHDAVMVLVPCPVLGKEGGGQEEEEEEARMIADAREAVLARFESVMRMEDVRDSLIHERVIGPREWREKYSLSRGAVFGLKHDLGQLSVLRPGRKHVGGRKRLGEGGKEEGREGGGAIEGMYYCGASSRPGNGVPLVMVGAKLLSEMILQE 663
            GGR    + +G+R++ GPSLLL+ +V+ E F+ LG S    +                                              RL K EP+Y V F D D +EL +N +R+   I   E P GFPR+  +L  A  + +  L+  ++++     FP F   L  +         P  S + +    F S+K++   +F  +Y+G++PY AP  +SLLQ IE   G++YP GGF +V R L  +   +GV  + +SPV  +L++ +   ++  GV L++   L ADLVV N DL Y    L  +   +S D   R  S S ISF W+FD  LP LR H  FLA +  E                        +++A+F+D R  DG   +FYV+ P++ D +  PPG +AV+VLVP   L  E GGQ EEE+   +++  RE VL   E+   ++D+R  L+HE V  P  W E+++L RGA+ GL H    +   RP  KH                     IE +Y+ GAS+ PG GVP+ + G+KL+++ I+++
Sbjct:   50 GGRCSIISKDGYRFDQGPSLLLMREVFEETFQDLGTSLEQEN---------------------------------------------VRLVKCEPNYCVWFPDKDIIELSTNLTRLKAQIQHHEGPDGFPRFCAFLNEAGTHYNLSLAHVLRKN-----FPGFLSLLRWDVLRSLISMHPWTSTYSRAARYFYSEKMRRVWTFGSMYLGMSPYRAPGTYSLLQYIETVDGIWYPEGGFQRVLRALGDIGMRSGVEYILNSPVKSVLLDDSNHVVK--GVLLEDGEELYADLVVINADLVYAYNELLPKTR-RSHDLKKRPVSCSSISFFWSFDEKLPHLRAHNIFLAEKYRE------------------------SFDAIFEDHRIPDGP--SFYVNVPSKIDPTAAPPGKEAVVVLVPVGHLTSEKGGQLEEEKWDTLVSQTREIVLDTIEARTGLQDLRSRLVHEMVETPLSWEERFNLDRGAILGLSHSFFNVLSFRPQIKH-------------------PDIERLYFVGASTHPGTGVPVCLAGSKLVTQQIVED 512          
BLAST of EWM24528.1 vs. NCBI_GenBank
Match: gi|992077222|ref|XP_015402152.1| (putative phytoene dehydrogenase [Aspergillus nomius NRRL 13137] >gi|910289206|gb|KNG81229.1| putative phytoene dehydrogenase [Aspergillus nomius NRRL 13137])

HSP 1 Score: 270.781 bits (691), Expect = 6.737e-79
Identity = 187/615 (30.41%), Postives = 295/615 (47.97%), Query Frame = 0
Query:   71 IVVIGAGIGGLVTAGRLARATRGRNVSITIVEKNDRESAGGRLGEYTWEGHRWETGPSLLLLPDVYMEIFEHLGGSFPSASNSTTERTSKDDMTRTSAVKCGGGRWERQAEPPIASGGSVSDGIGPSRLTKVEPSYLVIFGDNDRLELYSNRSRMVEAINRLE-PGGFPRYQDYLESAQNNLDFGLSAFIKESPQWEYFPAFCRNLNLNAR-----FWPLASHHRQLEGLFDSKKLQAALSFQDLYVGLTPYEAPAVFSLLQAIELNQGVFYPLGG----------------FAQVSRELLRLVEANGVCCLFDSPVAEILVESAGTGLRTRGVRLQNHHVLPADLVVSNVDLPYTNKYLFSRLHAQSKDHDTRGFSSSVISFLWAFDRPLPSLRHHTTFLAAREEEVEAEGGRKEGGRSGAKEGIDPAKAAWEAVFKDKRFDGRFLNFYVHAPARTDTSVCPPGHDAVMVLVPCPVLGKEGGGQEEEEEEARMIADAREAVLARFESVMRMEDVRDSLIHERVIGPREWREKYSLSRGAVFGLKHDLGQLSVLRPGRKHVGGRKRLGEGGKEEGREGGGAIEGMYYCGASSRPGNGVPLVMVGAKLLSEMILQE 663
            ++++GAG GG+ TA RLA+    +   + +VE++     GGR    + +G+R++ GPSLLL+ +V+ E FE LG S             ++D+                                  RL K EP+Y V F D D +EL ++ +R+ E I   E P GFPR+  +L  A  + +  L+  +++S     FP     L  N         P  S + +    F S+K++   +F  +Y+G++PY APA +SLLQ IE   G++YP GG                  +V R L  + + +GV  + +SPV  +L+         +G+ L++   L ADLVV N DL Y    L  +   +  D   R  S S ISF W+FD  LP LR H  FLA                        +  + +++A+F++ R      +FYV+ P++ D++  PPG +AV+VLVP   L  E GGQ E+E+   +++  RE +L   E+   ++ +R  L+HE V  P  W +KY+L RGA+ GL H    +   RP  KH                     IE +Y+ GAS+ PG GVP+ ++G+KL+++ I+++
Sbjct:    4 VIIVGAGTGGIATAARLAQ----QGFRVKVVEEHG--FIGGRCSIISKDGYRFDQGPSLLLMREVFEETFEDLGASL-----------KQEDI----------------------------------RLIKCEPNYCVWFPDMDIIELSTDLTRLKEQIQHHEGPDGFPRFCAFLNEAGTHYNLSLAHMLRKS-----FPRLLSLLRWNVLKSLIFIHPWTSTYARAARYFYSEKMRRVWTFGSMYMGMSPYRAPATYSLLQYIETVDGIWYPEGGSKEYAHSIPSIHSSTNLNKVLRALADIGQRSGVEYILNSPVKSVLLNHRDRF--AKGILLEDGEELYADLVVINADLVYAYNELLPKTR-RLNDLKKRPTSCSSISFFWSFDEKLPHLRAHNIFLA------------------------EEYRGSFDAIFEEHRIPDE-PSFYVNIPSKIDSTAAPPGKEAVVVLVPVGHLTSENGGQLEQEKWDTLVSQTREIILDTIEARTGLQGLRFKLVHEMVETPLTWEKKYNLDRGAILGLSHSFFNVLSFRPKTKH-------------------PDIERLYFVGASTHPGTGVPVCLLGSKLVAQQIVED 515          
BLAST of EWM24528.1 vs. NCBI_GenBank
Match: gi|238505842|ref|XP_002384123.1| (phytoene dehydrogenase, putative [Aspergillus flavus NRRL3357] >gi|220690237|gb|EED46587.1| phytoene dehydrogenase, putative [Aspergillus flavus NRRL3357])

HSP 1 Score: 270.396 bits (690), Expect = 1.131e-78
Identity = 178/560 (31.79%), Postives = 271/560 (48.39%), Query Frame = 0
Query:  110 GGRLGEYTWEGHRWETGPSLLLLPDVYMEIFEHLGGSFPSASNSTTERTSKDDMTRTSAVKCGGGRWERQAEPPIASGGSVSDGIGPSRLTKVEPSYLVIFGDNDRLELYSNRSRMVEAINRLE-PGGFPRYQDYLESAQNNLDFGLSAFIKESPQWEYFPAFCRNLNLNA-----RFWPLASHHRQLEGLFDSKKLQAALSFQDLYVGLTPYEAPAVFSLLQAIELNQGVFYPLGGFAQVSRELLRLVEANGVCCLFDSPVAEILVESAGTGLRTRGVRLQNHHVLPADLVVSNVDLPYTNKYLFSRLHAQSKDHDTRGFSSSVISFLWAFDRPLPSLRHHTTFLAAREEEVEAEGGRKEGGRSGAKEGIDPAKAAWEAVFKDKRFDGRFLNFYVHAPARTDTSVCPPGHDAVMVLVPCPVLGKEGGGQEEEEEEARMIADAREAVLARFESVMRMEDVRDSLIHERVIGPREWREKYSLSRGAVFGLKHDLGQLSVLRPGRKHVGGRKRLGEGGKEEGREGGGAIEGMYYCGASSRPGNGVPLVMVGAKLLSEMILQE 663
            GGR    + +G+R++ GPSLLL+ +V+ E F+ LG S    +                                              RL K EP+Y V F D D +EL +N +R+   I   E P GFPR+  +L  A  + +  L+  ++++     FP F   L  +         P  S + +    F S+K++   +F  +Y+G++PY AP  +SLLQ IE   G++YP GGF +V R L  +   +GV  + +SPV  +L++ +   ++  GV L++   L ADLVV N DL Y    L  +   +S D   R  S S ISF W+FD  LP LR H  FLA +  E                        +++A+F+D R      +FYV+ P++ D +  PPG +AV+VLVP   L  E GGQ EEE+   +++  RE VL   E+   ++D+R  L+HE V  P  W E+++L RGA+ GL H    +   RP  KH                     IE +Y+ GAS+ PG GVP+ + G+KL+++ I+++
Sbjct:   65 GGRCSIISKDGYRFDQGPSLLLMREVFEETFQDLGTSLEQEN---------------------------------------------VRLVKCEPNYCVWFPDKDIIELSTNLTRLKAQIQHHEGPDGFPRFCAFLNEASTHYNLSLAHVLRKN-----FPGFLSLLRWDVLRSLISMHPWTSTYSRAARYFYSEKMRRVWTFGSMYLGMSPYRAPGTYSLLQYIETVDGIWYPEGGFQRVLRALGDIGMRSGVEYILNSPVKSVLLDDSNHVVK--GVLLEDGEELYADLVVINADLVYAYNELLPKTR-RSHDLKKRPVSCSSISFFWSFDEKLPHLRAHNIFLAEKYRE------------------------SFDAIFEDHRIPDE-PSFYVNVPSKIDPTAAPPGKEAVVVLVPVGHLTSEKGGQLEEEKWDTLVSQTREIVLDTIEARTGLQDLRSRLVHEMVETPLSWEERFNLDRGAILGLSHSFFNVLSFRPQIKH-------------------PDIERLYFVGASTHPGTGVPVCLAGSKLVTQQIVED 527          
The following BLAST results are available for this feature:
BLAST of EWM24528.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106035|gb|EWM24528.1|0.000e+0100.00phytoene dehydrogenase [Nannochloropsis gaditana] ... [more]
gi|298706838|emb|CBJ25802.1|4.612e-11438.73conserved unknown protein [Ectocarpus siliculosus][more]
gi|873225900|emb|CEM22660.1|7.571e-11235.48unnamed protein product [Vitrella brassicaformis C... [more]
gi|676389039|ref|XP_009037798.1|6.989e-9937.17hypothetical protein AURANDRAFT_1353, partial [Aur... [more]
gi|1084610838|gb|OGO63958.1|6.480e-8632.38hypothetical protein A2Z45_04835 [Chloroflexi bact... [more]
gi|397613236|gb|EJK62100.1|5.601e-8332.54hypothetical protein THAOC_17301, partial [Thalass... [more]
gi|317155223|ref|XP_001824518.2|3.909e-7932.09phytoene dehydrogenase [Aspergillus oryzae RIB40][more]
gi|83773258|dbj|BAE63385.1|5.255e-7932.09unnamed protein product [Aspergillus oryzae RIB40][more]
gi|992077222|ref|XP_015402152.1|6.737e-7930.41putative phytoene dehydrogenase [Aspergillus nomiu... [more]
gi|238505842|ref|XP_002384123.1|1.131e-7831.79phytoene dehydrogenase, putative [Aspergillus flav... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6160rna6160Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications