EWM24586.1, cds6099 (CDS) Nannochloropsis gaditana

Overview
NameEWM24586.1
Unique Namecds6099
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:608165..609109 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24586.1
ProductJAB1/Mov34/MPN/PAD-1
Orig transcript idgnl|cribi|Naga_100062g33.909.mrna
GeneEIF3f
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:608165..609109 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
GO:0003743translation initiation factor activity
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR027531eIF3f
IPR024969Rpn11/EIF3F_C
IPR000555JAMM/MPN+_dom
Homology
BLAST of EWM24586.1 vs. NCBI_GenBank
Match: gi|585106102|gb|EWM24586.1| (JAB1/Mov34/MPN/PAD-1 [Nannochloropsis gaditana])

HSP 1 Score: 638.262 bits (1645), Expect = 0.000e+0
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
Query:    1 MALQGSTADALFVDSVQNVHVEVHPVVIFGILDHYNRRPEQGPGQAPGRVIGTLLGTVVGNVVQIHNAFGVPHAENGNEVALGQDYHRTMYAQFTRINDKERIVGWYATTLEEGRALNSNSIIIHGFYAGNSDAAGARLVHLVVDAAVASGRVAIKAYVSTAVHISGAPVANIFHQVKVQVVSTAPERVCLDRMVRGQGREKAWSESDTFAKVLPGGGAVAAREDLEASVAALLKMLEEVIDFVDRVVAGKVEADSAIGCELADTLSAVPRVRPELFDSIFNGNLQDLLMVSYLASLTKANLAISEKLSGVRHK 314
            MALQGSTADALFVDSVQNVHVEVHPVVIFGILDHYNRRPEQGPGQAPGRVIGTLLGTVVGNVVQIHNAFGVPHAENGNEVALGQDYHRTMYAQFTRINDKERIVGWYATTLEEGRALNSNSIIIHGFYAGNSDAAGARLVHLVVDAAVASGRVAIKAYVSTAVHISGAPVANIFHQVKVQVVSTAPERVCLDRMVRGQGREKAWSESDTFAKVLPGGGAVAAREDLEASVAALLKMLEEVIDFVDRVVAGKVEADSAIGCELADTLSAVPRVRPELFDSIFNGNLQDLLMVSYLASLTKANLAISEKLSGVRHK
Sbjct:    1 MALQGSTADALFVDSVQNVHVEVHPVVIFGILDHYNRRPEQGPGQAPGRVIGTLLGTVVGNVVQIHNAFGVPHAENGNEVALGQDYHRTMYAQFTRINDKERIVGWYATTLEEGRALNSNSIIIHGFYAGNSDAAGARLVHLVVDAAVASGRVAIKAYVSTAVHISGAPVANIFHQVKVQVVSTAPERVCLDRMVRGQGREKAWSESDTFAKVLPGGGAVAAREDLEASVAALLKMLEEVIDFVDRVVAGKVEADSAIGCELADTLSAVPRVRPELFDSIFNGNLQDLLMVSYLASLTKANLAISEKLSGVRHK 314          
BLAST of EWM24586.1 vs. NCBI_GenBank
Match: gi|299115231|emb|CBN74067.1| (translation initiation factor eIF3 f subunit [Ectocarpus siliculosus])

HSP 1 Score: 276.174 bits (705), Expect = 2.368e-88
Identity = 143/295 (48.47%), Postives = 206/295 (69.83%), Query Frame = 0
Query:   15 SVQNVHVEVHPVVIFGILDHYNRRPEQGPGQAPGRVIGTLLGTVVGNVVQIHNAFGVPHAENGNEVALGQDYHRTMYAQFTRINDKERIVGWYATTLEEGRALNSNSIIIHGFYAGNSDAAGARLVHLVVDAAVASGRVAIKAYVSTAVHISGAPVANIFHQVKVQVVSTAPERVCLDRMVRGQGREKAWSESDTFAKVLPGGGAVAAREDLEASVAALLKMLEEVIDFVDRVVAGKVEADSAIGCELADTLSAVPRVRPELFDSIFNGNLQDLLMVSYLASLTKANLAISEKLS 309
            S  ++ V+VHP+V+F +LDHY RRPE        RVIGTLLGTV  NVV+I N+F VPH E  +EVA+G+D++++M A   R+N +E +VGWYAT+ + G  +  +S +IH FY G  +    R VHLVVD A+ +  V  KA++ST + I G+ +AN+FH+VKV +VS   ER+C+DRMV+GQ  E+A++  +  A+V      +A+   LE S+  L+ ML++  ++V  VV GK+ AD  +G +LADTL+A+PR+RPE F+ +F+ NLQDLLMVSYL+SLT+  LAI+EKL+
Sbjct:   43 SSNDIVVKVHPMVLFSVLDHYLRRPENQ-----KRVIGTLLGTVTANVVEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQRVNGRESVVGWYATSFD-GVLIVDDSSLIHDFYTGECE----RPVHLVVDTALKNNIVGCKAFISTPLEIDGSALANVFHEVKVSLVSAEAERICIDRMVKGQ--EEAFTTPEGLAEV---DSRMAS---LETSMQRLVTMLQQAEEYVGTVVDGKLPADPHMGRKLADTLAAIPRMRPEAFNRLFDDNLQDLLMVSYLSSLTRTQLAIAEKLA 319          
BLAST of EWM24586.1 vs. NCBI_GenBank
Match: gi|397639682|gb|EJK73701.1| (hypothetical protein THAOC_04661 [Thalassiosira oceanica])

HSP 1 Score: 253.447 bits (646), Expect = 1.951e-79
Identity = 132/296 (44.59%), Postives = 187/296 (63.18%), Query Frame = 0
Query:   19 VHVEVHPVVIFGILDHYNRRPEQGPGQAPGRVIGTLLGTVVGNVVQIHNAFGVPHAENGNEVALGQDYHRTMYAQFTRINDKERIVGWYATTLE-----EGRALNSNSIIIHGFYAGNSDAAGARLVHLVVDAAVASGRVAIKAYVSTAVHISGAPVANIFHQVKVQVVSTAPERVCLDRMVRGQGREKAWSESDTFAKVLPGGGAVAAREDLEASVAALLKMLEEVIDFVDRVVAGKVEADSAIGCELADTLSAVPRVRPELFDSIFNGNLQDLLMVSYLASLTKANLAISEKLS 309
              V VHP+V+  +LDH+ RR E       GRVIGTLLG   G+ V+I N+F VPHAE G+EVA+G+D++R M +   R N +E +VGWYAT L      E   +   S +IH FYAG  D      +HLVVD A+ +  +A++AY ST V I G P+AN+FH++++ V S+  ER+C+DRM+         ++S   A      G     E L  S+  LL MLE   ++VD+VV G V AD A+G ++++ LS++PR+RPE FD +FN +LQDLLMV+YL+++TK  L I+EKL+
Sbjct:   40 CQVNVHPLVLLSVLDHHTRRQEGA-----GRVIGTLLGKRNGDTVEITNSFAVPHAERGDEVAIGKDFNRQMLSLHLRANPRETVVGWYATALPDEATGESHCIADTSSLIHEFYAGECDDDP---IHLVVDTALKADAIALRAYKSTPVVIKGEPLANMFHEIRLSVRSSEAERICVDRMI-------GATDSPDGADPTQDEG-----EALRVSMEKLLAMLETCSEYVDKVVDGSVPADDALGMDISECLSSIPRIRPEAFDKMFNDSLQDLLMVTYLSNITKTQLTIAEKLN 315          
BLAST of EWM24586.1 vs. NCBI_GenBank
Match: gi|224014492|ref|XP_002296908.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220968288|gb|EED86636.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 251.521 bits (641), Expect = 3.731e-79
Identity = 127/302 (42.05%), Postives = 191/302 (63.25%), Query Frame = 0
Query:   21 VEVHPVVIFGILDHYNRRPEQGPGQAPGRVIGTLLGTVVGNVVQIHNAFGVPHAENGNEVALGQDYHRTMYAQFTRINDKERIVGWYATTLE--------EGRALNSNSIIIHGFYAGNSDAAGARLVHLVVDAAVASGRVAIKAYVSTAVHISGAPVANIFHQVKVQVVSTAPERVCLDRMVRGQGREKAWSESDTFAKVLPGGGAVAARED---LEASVAALLKMLEEVIDFVDRVVAGKVEADSAIGCELADTLSAVPRVRPELFDSIFNGNLQDLLMVSYLASLTKANLAISEKLSGV 311
            V VHP+V+  +LDH+ RR E       GRVIGTLLG   G+ V+I N F VPHAE G+EVA+G+D++R M A   R N +E ++GWYAT L         E + +   S +IH FYA   +      +HLVVD ++ +  +A++AY ST V + G P+AN+FH++++ V S+  ER+C+DRM+R     +               GA A++++   L+ S+  LL MLE   ++VD+VV G + AD  +G ++++TL++VPR+RPE+FD +FN +LQDLLMV+YL+++TK  L I+EKL+  
Sbjct:    1 VLVHPIVLLSVLDHHTRRQE-----GAGRVIGTLLGRRDGDKVEITNCFAVPHAERGDEVAIGKDFNRQMLALHLRANKRETVIGWYATALPDENDPVNGESKCIADTSSLIHEFYATECEDDP---IHLVVDTSLETDAMALRAYKSTPVSVKGEPLANLFHEIRLAVKSSESERICVDRMIRSASSAE---------------GAPASQDESAALQISMERLLAMLETCSEYVDKVVDGTISADDQVGRDISETLNSVPRIRPEVFDKMFNDSLQDLLMVTYLSNITKTQLTIAEKLNAT 279          
BLAST of EWM24586.1 vs. NCBI_GenBank
Match: gi|219115896|ref|XP_002178743.1| (COP9 SigNalosome subunit 6, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409510|gb|EEC49441.1| COP9 SigNalosome subunit 6, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 234.958 bits (598), Expect = 1.067e-72
Identity = 121/292 (41.44%), Postives = 180/292 (61.64%), Query Frame = 0
Query:   23 VHPVVIFGILDHYNRRPEQGPGQAPGRVIGTLLGTVVGNVVQIHNAFGVPHAENGNEVALGQDYHRTMYAQFTRINDKERIVGWYAT-----TLEEGRALNSNSIIIHGFYAGNSDAAGARLVHLVVDAAVASGRVAIKAYVSTAVHISGAPVANIFHQVKVQVVSTAPERVCLDRMVRGQGREKAWSESDTFAKVLPGGGAVAAREDLEASVAALLKMLEEVIDFVDRVVAGKVEADSAIGCELADTLSAVPRVRPELFDSIFNGNLQDLLMVSYLASLTKANLAISEKLS 309
            VHPVV+  +LDH+ RR E+      GRVIGTLLG   GNVV++ N F VPHAE G EVA+G+D+++TM     R N KE +VGWYA+     +   G  +   S +IH FYAG +D      VHLVVD  +    ++++A+ S+ + + G  + N+FH++K+ + S  PE +CL++M+R  G   A  +    AK L            + S+  L  +LE+ + +VD VV GK   D+  G ++ADTL+ V RVRPE+FD +F+ +LQDLLMVSYL+++T+  + I++KL+
Sbjct:    3 VHPVVLLHVLDHHTRRQEES-----GRVIGTLLGRQNGNVVEVTNCFSVPHAERGEEVAIGKDFNKTMLGLHLRANRKETVVGWYASAANGDSESNGDLITDTSSLIHDFYAGEADEGDP--VHLVVDTRLKEDSLSMRAFKSSQIVVQGEAMGNLFHELKLSLKSNEPEAICLNQMIRTGGELVASKDESNSAKAL------------QISMEKLYALLEKTLAYVDSVVDGKTPPDAEAGRQIADTLATVARVRPEVFDRLFHDSLQDLLMVSYLSNITRTQMTIADKLN 275          
BLAST of EWM24586.1 vs. NCBI_GenBank
Match: gi|1072224767|gb|OEU09516.1| (hypothetical protein FRACYDRAFT_271363 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 220.705 bits (561), Expect = 2.533e-67
Identity = 121/290 (41.72%), Postives = 175/290 (60.34%), Query Frame = 0
Query:   28 IFGILDHYNRRPEQGPGQAPGRVIGTLLGTVVGNVVQIHNAFGVPHAENGNEVALGQDYHRTMYAQFTRINDKERIVGWYATTL------EEGRALNSN-SIIIHGFYAGNSDAAGARLVHLVVDAAVASGRVAIKAYVSTAVHISGAPVANIFHQVKVQVVSTAPERVCLDRMVRGQGREKAWSESDTFAKVLPGGGAVAAREDLEASVAALLKMLEEVIDFVDRVVAGKVEADSAIGCELADTLSAVPRVRPELFDSIFNGNLQDLLMVSYLASLTKANLAISEKLSG 310
            +  +LDH+ RR E     A GRVIGTLLG   G  V++ N F VPHAE G+EVA+G+D+++ M A   R N KE +VGWYA+        EE   L +N S +IH FYA  SD      VHLVVD  +    +  + Y ST V + G P+AN+FH++++ + ++ PE + L RMV     +K   E             +  +E L  S+  L  +LE   D+VD V+ GK+  D+ +G ++ADTL+ VPR+RPE+FD +FN +LQDLLMV+YL+++T+  L+I+EKL+ 
Sbjct:    1 MLHVLDHHTRRQE-----ASGRVIGTLLGRRDGKKVEVTNCFAVPHAERGDEVAIGKDFNKQMLALHLRANRKETVVGWYASAALGDEDNEEVPDLIANTSSLIHEFYAEESDEGDP--VHLVVDTRLIEDAITARVYRSTPVVVQGEPMANMFHELRLTLKNSEPETLALHRMVADSKGKKDSEE-------------LVEQEPLLVSMEKLFNLLETASDYVDAVIDGKISPDAEVGRKVADTLATVPRIRPEVFDKLFNDSLQDLLMVTYLSNITQTQLSIAEKLNA 270          
BLAST of EWM24586.1 vs. NCBI_GenBank
Match: gi|698816480|ref|XP_009841269.1| (hypothetical protein H257_14997 [Aphanomyces astaci] >gi|574103874|gb|ETV69412.1| hypothetical protein H257_14997 [Aphanomyces astaci])

HSP 1 Score: 210.305 bits (534), Expect = 4.126e-63
Identity = 122/290 (42.07%), Postives = 169/290 (58.28%), Query Frame = 0
Query:   21 VEVHPVVIFGILDHYNRRPEQGPGQAPGRVIGTLLGTVVGN--VVQIHNAFGVPHAENGNEVALGQDYHRTMYAQFTRINDKERIVGWYATTLEEGRALNSNSIIIHGFYAGNSDAAGARLVHLVVDAAVASGRVAIKAYVSTAVHISGAPVANIFHQVKVQVVSTAPERVCLDRMVRGQGREKAWSESDTFAKVLPGGGAVAAREDLEASVAALLKMLEEVIDFVDRVVAGKVEADSAIGCELADTLSAVPRVRPELFDSIFNGNLQDLLMVSYLASLTKANLAISEKL 308
            V +HPVV+F ILD Y RR E        R+IGTLLG V     VV + N+F VPH E G++VA+G+DYHR M     R+N  E +VGWYAT   +G  +N NS +IH FY+    A  A  VH+V D ++    + I  ++S+A+ ++   +AN F QVKVQ  +   E + L+ M +          S      LP        E LE S+A L  +L +  DFV  VV+G    +  IG ELA+ ++++P +R ++FD IFN  LQDLLMVSYL+SLT+A L+I+EKL
Sbjct:   15 VNIHPVVVFQILDRYLRRAEDQE-----RIIGTLLGVVDSEHGVVTVSNSFPVPHLEKGDDVAVGKDYHRQMLLLHQRVNPNEVVVGWYATASADGSVVNENSCLIHDFYS----AECAAPVHIVTDTSLRGDNLNISGFISSALTVADVALANQFKQVKVQTKTYEAESIALNVMAKA---------STAALSSLP-----TELEALEHSIARLHALLGQSADFVGNVVSGASVGNPKIGRELAEAVASIPAIRTDVFDQIFNNGLQDLLMVSYLSSLTQAQLSIAEKL 281          
BLAST of EWM24586.1 vs. NCBI_GenBank
Match: gi|669148324|ref|XP_008609724.1| (hypothetical protein SDRG_05768 [Saprolegnia diclina VS20] >gi|530738701|gb|EQC36943.1| hypothetical protein SDRG_05768 [Saprolegnia diclina VS20])

HSP 1 Score: 210.305 bits (534), Expect = 4.741e-63
Identity = 124/290 (42.76%), Postives = 171/290 (58.97%), Query Frame = 0
Query:   21 VEVHPVVIFGILDHYNRRPEQGPGQAPGRVIGTLLGTVVGN--VVQIHNAFGVPHAENGNEVALGQDYHRTMYAQFTRINDKERIVGWYATTLEEGRALNSNSIIIHGFYAGNSDAAGARLVHLVVDAAVASGRVAIKAYVSTAVHISGAPVANIFHQVKVQVVSTAPERVCLDRMVRGQGREKAWSESDTFAKVLPGGGAVAAREDLEASVAALLKMLEEVIDFVDRVVAGKVEADSAIGCELADTLSAVPRVRPELFDSIFNGNLQDLLMVSYLASLTKANLAISEKL 308
            V VHPVV+F ILD + RR     G+   RVIGTLLG V     VV I N+F VPH E G+EVA+G+DYHR M     R+N  E +VGWYAT+     A+N NS +IH FY+       A  VH+VVD ++ S  + I  ++S+A+ ++   +AN F QVKV+  +   E + LD M +              A  LP        E LE ++  L ++L     +V  VVAGK  A+  +G ELA+ ++++P +R ++FD IFN  +QDLLMVSYL+SLT+A L+ISEKL
Sbjct:   13 VHVHPVVVFQILDRFLRR-----GEDQKRVIGTLLGVVDAEHGVVTISNSFPVPHLEKGDEVAVGKDYHRQMLLLHQRVNPNEVVVGWYATS-TTAEAINENSCLIHEFYSSEC----ASPVHVVVDTSLESDNLNIMGFISSALSVADVALANQFKQVKVETKTYEAESIALDVMAKRSSS----------AASLPSD-----LEALEQAIVRLHELLATSAAYVGDVVAGKQAANPKLGRELAEAVASIPPMRADVFDQIFNNGMQDLLMVSYLSSLTQAQLSISEKL 277          
BLAST of EWM24586.1 vs. NCBI_GenBank
Match: gi|1173937234|gb|OQR88071.1| (eukaryotic translation initiation factor 3 subunit F [Achlya hypogyna])

HSP 1 Score: 208.764 bits (530), Expect = 1.574e-62
Identity = 123/290 (42.41%), Postives = 174/290 (60.00%), Query Frame = 0
Query:   21 VEVHPVVIFGILDHYNRRPEQGPGQAPGRVIGTLLGTVVGN--VVQIHNAFGVPHAENGNEVALGQDYHRTMYAQFTRINDKERIVGWYATTLEEGRALNSNSIIIHGFYAGNSDAAGARLVHLVVDAAVASGRVAIKAYVSTAVHISGAPVANIFHQVKVQVVSTAPERVCLDRMVRGQGREKAWSESDTFAKVLPGGGAVAAREDLEASVAALLKMLEEVIDFVDRVVAGKVEADSAIGCELADTLSAVPRVRPELFDSIFNGNLQDLLMVSYLASLTKANLAISEKL 308
            V VHPVV+F ILD + RR      Q   RVIGTLLG V     VV I N+F VPH E G+EVA+G+DYHR M     R+N  E +VGWYAT+     A+N NS +IH FY+    A  A  VH+VVD ++ +  + I  ++S+A+ ++   +AN F QVKV+  +   E + LD M + +  E A   SD               E LEA++  L ++L +   +V  VVAGK  A+  +G ELA+ ++++P +  ++FD +FN  +QDLLMVSYL+SLT+A L+I+EKL
Sbjct:   13 VHVHPVVVFQILDRFLRR-----AQDQKRVIGTLLGVVDAEHGVVTISNSFPVPHLEKGDEVAVGKDYHRQMLLLHQRVNPNEVVVGWYATS-TTAEAINENSCLIHEFYS----AECATPVHVVVDTSLQTDNLNIMGFISSALSVADVALANQFKQVKVETKTYEAEAIALDVMAK-RSSEAASLPSDL--------------EALEAAIVRLHELLAQSAAYVGEVVAGKQAANPKLGRELAEAVASIPPMHADVFDQMFNNGMQDLLMVSYLSSLTQAQLSIAEKL 277          
BLAST of EWM24586.1 vs. NCBI_GenBank
Match: gi|675171359|ref|XP_008894564.1| (hypothetical protein PPTG_03631 [Phytophthora parasitica INRA-310] >gi|566018125|gb|ETI41036.1| hypothetical protein F443_13678 [Phytophthora parasitica P1569] >gi|566018156|gb|ETI41067.1| hypothetical protein F443_13674 [Phytophthora parasitica P1569] >gi|567955512|gb|ETK81145.1| hypothetical protein L915_13349 [Phytophthora parasitica] >gi|567984183|gb|ETL34558.1| hypothetical protein L916_13230 [Phytophthora parasitica] >gi|568013643|gb|ETL87820.1| hypothetical protein L917_13055 [Phytophthora parasitica] >gi|568043799|gb|ETM41065.1| hypothetical protein L914_13143 [Phytophthora parasitica] >gi|568106053|gb|ETN20689.1| hypothetical protein PPTG_03631 [Phytophthora parasitica INRA-310] >gi|570321785|gb|ETO69733.1| hypothetical protein F444_13741 [Phytophthora parasitica P1976] >gi|570945575|gb|ETP10832.1| hypothetical protein F441_13607 [Phytophthora parasitica CJ01A1] >gi|570977351|gb|ETP38974.1| hypothetical protein F442_13542 [Phytophthora parasitica P10297] >gi|970663236|gb|KUG00469.1| Eukaryotic translation initiation factor 3 subunit F-1 [Phytophthora nicotianae])

HSP 1 Score: 206.453 bits (524), Expect = 1.341e-61
Identity = 122/299 (40.80%), Postives = 172/299 (57.53%), Query Frame = 0
Query:   10 ALFVDSVQNVHVEVHPVVIFGILDHYNRRPEQGPGQAPGRVIGTLLGTVVGNVVQIHNAFGVPHAENGNEVALGQDYHRTMYAQFTRINDKERIVGWYATTLEEGRALNSNSIIIHGFYAGNSDAAGARLVHLVVDAAVASGRVAIKAYVSTAVHISGAPVANIFHQVKVQVVSTAPERVCLDRMVRGQGREKAWSESDTFAKVLPGGGAVAAREDLEASVAALLKMLEEVIDFVDRVVAGKVEADSAIGCELADTLSAVPRVRPELFDSIFNGNLQDLLMVSYLASLTKANLAISEKL 308
            AL + +     V++HPVV+  +LD   RR E        RVIGTLLG V G V +I N+F VPH ENG+EVA+G+D+H  MY    R+N+ E +VGWYA        L+ +S +IH FY+   +      VHLV+D ++AS ++ + AYV+  + +    + N F Q+ V    + PE + L+ M    G  KA +        LP        E LE ++  L K ++    FV  VVAGK  ADS +G E+AD L+A+P +R E FD +FN  LQDLLMVSYL+ LT+A L+++EKL
Sbjct:    3 ALLLGTEPVTEVKLHPVVVLQVLDRSLRRAEDQE-----RVIGTLLGRVEGGVAEITNSFAVPHLENGDEVAVGRDFHTHMYELHQRVNEGEVVVGWYAAG---PNRLDDHSALIHQFYSSVCELP----VHLVLDTSLASDKLDVSAYVAAPLEVVDTALVNQFKQIPVTQKLSEPEAIALNAMAPKDGENKAVA--------LP-----KELEALEETMEQLYKCIDGASSFVGDVVAGKQTADSKLGREIADALAAIPILREEQFDQLFNTGLQDLLMVSYLSGLTQAQLSMAEKL 276          
The following BLAST results are available for this feature:
BLAST of EWM24586.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106102|gb|EWM24586.1|0.000e+0100.00JAB1/Mov34/MPN/PAD-1 [Nannochloropsis gaditana][more]
gi|299115231|emb|CBN74067.1|2.368e-8848.47translation initiation factor eIF3 f subunit [Ecto... [more]
gi|397639682|gb|EJK73701.1|1.951e-7944.59hypothetical protein THAOC_04661 [Thalassiosira oc... [more]
gi|224014492|ref|XP_002296908.1|3.731e-7942.05predicted protein, partial [Thalassiosira pseudona... [more]
gi|219115896|ref|XP_002178743.1|1.067e-7241.44COP9 SigNalosome subunit 6, partial [Phaeodactylum... [more]
gi|1072224767|gb|OEU09516.1|2.533e-6741.72hypothetical protein FRACYDRAFT_271363 [Fragilario... [more]
gi|698816480|ref|XP_009841269.1|4.126e-6342.07hypothetical protein H257_14997 [Aphanomyces astac... [more]
gi|669148324|ref|XP_008609724.1|4.741e-6342.76hypothetical protein SDRG_05768 [Saprolegnia dicli... [more]
gi|1173937234|gb|OQR88071.1|1.574e-6242.41eukaryotic translation initiation factor 3 subunit... [more]
gi|675171359|ref|XP_008894564.1|1.341e-6140.80hypothetical protein PPTG_03631 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6114rna6114Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications