EWM24600.1, cds6084 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24600.1 vs. NCBI_GenBank
Match: gi|585106116|gb|EWM24600.1| (phosphatidylethanolamine n [Nannochloropsis gaditana]) HSP 1 Score: 791.186 bits (2042), Expect = 0.000e+0 Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0 Query: 1 MPHGHISLQPFGLCAAAAFAVTTTQGFVPPITPATSHAGSCVCFSAPSPSVSIAPTPPTNPAEASPIDAHELRGVLKDALYRSLGNEATTSSRAENYDAMEHVLACPLTLKPLRRVVRLAGPFGQVVNMVTTRGNKYPANEVYMDLVPAEERMQVPFFSPSAIVTQELFRSPLTSFLYERGWRDNFKTAGFPGIDEEFRDLEAFFAPLSDAGSESEREGEQQRRSGRGTVIDLSCGSGLTARRLCRSRKWKRVIAADFSESMLRETRRRFLEEKLPVPELVRADASRQPFQTSSVDAIHAGAALHCWPRLEESLRECLRVLKPGGRMYASTFEVNERLQSNTFRFFQLDELRRLFVSSGFVEVEVRREGVACLIVKAVKAMDSGGRQ 387 MPHGHISLQPFGLCAAAAFAVTTTQGFVPPITPATSHAGSCVCFSAPSPSVSIAPTPPTNPAEASPIDAHELRGVLKDALYRSLGNEATTSSRAENYDAMEHVLACPLTLKPLRRVVRLAGPFGQVVNMVTTRGNKYPANEVYMDLVPAEERMQVPFFSPSAIVTQELFRSPLTSFLYERGWRDNFKTAGFPGIDEEFRDLEAFFAPLSDAGSESEREGEQQRRSGRGTVIDLSCGSGLTARRLCRSRKWKRVIAADFSESMLRETRRRFLEEKLPVPELVRADASRQPFQTSSVDAIHAGAALHCWPRLEESLRECLRVLKPGGRMYASTFEVNERLQSNTFRFFQLDELRRLFVSSGFVEVEVRREGVACLIVKAVKAMDSGGRQ Sbjct: 1 MPHGHISLQPFGLCAAAAFAVTTTQGFVPPITPATSHAGSCVCFSAPSPSVSIAPTPPTNPAEASPIDAHELRGVLKDALYRSLGNEATTSSRAENYDAMEHVLACPLTLKPLRRVVRLAGPFGQVVNMVTTRGNKYPANEVYMDLVPAEERMQVPFFSPSAIVTQELFRSPLTSFLYERGWRDNFKTAGFPGIDEEFRDLEAFFAPLSDAGSESEREGEQQRRSGRGTVIDLSCGSGLTARRLCRSRKWKRVIAADFSESMLRETRRRFLEEKLPVPELVRADASRQPFQTSSVDAIHAGAALHCWPRLEESLRECLRVLKPGGRMYASTFEVNERLQSNTFRFFQLDELRRLFVSSGFVEVEVRREGVACLIVKAVKAMDSGGRQ 387
BLAST of EWM24600.1 vs. NCBI_GenBank
Match: gi|553191583|ref|XP_005855405.1| (hypothetical protein NGA_2005920 [Nannochloropsis gaditana CCMP526] >gi|553193680|ref|XP_005855816.1| hypothetical protein NGA_2005910 [Nannochloropsis gaditana CCMP526] >gi|422293244|gb|EKU20544.1| hypothetical protein NGA_2005910 [Nannochloropsis gaditana CCMP526] >gi|422293654|gb|EKU20954.1| hypothetical protein NGA_2005920 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 784.637 bits (2025), Expect = 0.000e+0 Identity = 384/387 (99.22%), Postives = 384/387 (99.22%), Query Frame = 0 Query: 1 MPHGHISLQPFGLCAAAAFAVTTTQGFVPPITPATSHAGSCVCFSAPSPSVSIAPTPPTNPAEASPIDAHELRGVLKDALYRSLGNEATTSSRAENYDAMEHVLACPLTLKPLRRVVRLAGPFGQVVNMVTTRGNKYPANEVYMDLVPAEERMQVPFFSPSAIVTQELFRSPLTSFLYERGWRDNFKTAGFPGIDEEFRDLEAFFAPLSDAGSESEREGEQQRRSGRGTVIDLSCGSGLTARRLCRSRKWKRVIAADFSESMLRETRRRFLEEKLPVPELVRADASRQPFQTSSVDAIHAGAALHCWPRLEESLRECLRVLKPGGRMYASTFEVNERLQSNTFRFFQLDELRRLFVSSGFVEVEVRREGVACLIVKAVKAMDSGGRQ 387 MPHGHISLQPFGLCAAAAFAVTTTQGFVPPITPATSHAGSCVCFSAPSPSVSIAPTPPTNPAEASPIDAHELRGVLKDALYRSLGNEATTSSRA NYDAMEHVLACPLTLKPLRRVVRLAGPFGQVVNMVTTRGNKYPANEVYMDLVP EERMQVPFFSPSAIVTQELFRSPLTSFLYERGWRDNFKTAGFPGIDEEFRDLEAFFAPLSDAGSESEREGEQQRRSGRGTVIDLSCGSGL ARRLCRSRKWKRVIAADFSESMLRETRRRFLEEKLPVPELVRADASRQPFQTSSVDAIHAGAALHCWPRLEESLRECLRVLKPGGRMYASTFEVNERLQSNTFRFFQLDELRRLFVSSGFVEVEVRREGVACLIVKAVKAMDSGGRQ Sbjct: 1 MPHGHISLQPFGLCAAAAFAVTTTQGFVPPITPATSHAGSCVCFSAPSPSVSIAPTPPTNPAEASPIDAHELRGVLKDALYRSLGNEATTSSRAGNYDAMEHVLACPLTLKPLRRVVRLAGPFGQVVNMVTTRGNKYPANEVYMDLVPVEERMQVPFFSPSAIVTQELFRSPLTSFLYERGWRDNFKTAGFPGIDEEFRDLEAFFAPLSDAGSESEREGEQQRRSGRGTVIDLSCGSGLMARRLCRSRKWKRVIAADFSESMLRETRRRFLEEKLPVPELVRADASRQPFQTSSVDAIHAGAALHCWPRLEESLRECLRVLKPGGRMYASTFEVNERLQSNTFRFFQLDELRRLFVSSGFVEVEVRREGVACLIVKAVKAMDSGGRQ 387
BLAST of EWM24600.1 vs. NCBI_GenBank
Match: gi|873232256|emb|CEM05766.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 236.884 bits (603), Expect = 3.201e-69 Identity = 154/382 (40.31%), Postives = 198/382 (51.83%), Query Frame = 0 Query: 24 TQGFVPPITPATSHAGSCVCFSAPSPSVSIAPTPPTN-----PAEASPIDAHELRGVLKDALYRSLGNEATTSSRAENYDAMEHVLACPLTLKPLRRVVRLAGPFGQVVNMVTTRGNK--------YPANEVYMDLVPAEERMQVPFF--SPSAIVTQELFRSPLTSFLYERGWRDNFKTAGFPGIDEEFRDLEAFFAPLSDAGSESEREGEQQRRSGRGTVIDLSCGSGLTARRLCRSRKWKRVIAADFSESMLRETRRRFLEEKLPVPELVRADASRQPFQTSSVDAIHAGAALHCWPRLEESLRECLRVLKPGGRMYASTFEVNERLQSNT----------FRFFQLDELRRLFVSSGFVEVEVRREGVACLIVKAVKA 380 T G + P TSHA S TP T+ A P +R DA E +++ E E VLA P+ L+PL R VVN + RG + YP N +Y+DLVP E + P + S S +V + FR+PL SF+YERG+R NF AGFPGID+E+ +++ FF+P EG +DLSCG G ARRL +S ++ RVIAADFSE+ML ET F+ E + PELVR D +R PF T S+D IHAGAA+HCWP LEESL E R LKPGGR YA+TF+V SN F F ++EL+ +GF V+VR+ G CLI K +K Sbjct: 11 TSGIFLLLQPLTSHALSSFIRPLSPSLSPSLDTPHTHTRLLSKATTLPPRGGRVRSRRDDAGAPPSDVEISSNGGNEPATGKESVLADPVALEPLTEYER-------VVNNLVVRGYRKAKRYSCRYPVNPIYVDLVP-REVSERPVWQQSVSELVKTQNFRNPLLSFVYERGYRQNFARAGFPGIDKEWAEIQPFFSP---------NEGPSS------VALDLSCGPGFMARRLVKSGRFGRVIAADFSEAMLTETWGGFVREGIQRPELVRCDVARLPFMTESIDVIHAGAAMHCWPSLEESLYEVYRALKPGGRFYATTFKVGGWTGSNGFGLAARQTSFFYFSSVNELKTYLKRAGFETVDVRQVGRGCLIAKCIKG 369
BLAST of EWM24600.1 vs. NCBI_GenBank
Match: gi|922863212|gb|KOO30692.1| (s-adenosylmethionine-dependent methyltransferase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 222.246 bits (565), Expect = 1.789e-65 Identity = 131/302 (43.38%), Postives = 178/302 (58.94%), Query Frame = 0 Query: 101 EHVLACPLTLKPLRRVVRLAGPFGQVVNMVTTRGNKYPANEVYMDLVP----AEERMQVPFF--------SPSAIVTQELFRSPLTSFLYERGWRDNFKTAGFPGIDEEFRDLEAFFAPLSDAGSESEREGEQQRRSGRGTVIDLSCGSGLTARRLCRSRKWKRVIAADFSESMLRETRRRFLEEKLPVPELV--RADASRQPFQTSSVDAIHAGAALHCWPRLEESLRECLRVLKPGGRMYASTF-------EVNERLQSNTFRFFQ-LDELRRLFVSSGF--VEVEVRREGVACLIVKAV 378 + VLA P++ +PLR V + G + V+ G +YP N +Y DLVP +EE + + + + V LFRSPLT+FLYERGWR NFK AGFPGID EF +++ +F P + G V+D+SCGSGL RRL +S + RV+A D+SE+ML+ET RR EE + L RAD + P + +S+DA+HAGAA+HCWPRLEE LR+ +VL+PGG YA+TF + + ++FRFF+ DELR L V +GF V VR EG C ++KAV Sbjct: 38 DDVLADPISKQPLRAEVTVVGGLRRE-RCVSQDGIRYPVNRLYADLVPTSGRSEESLTIGIDELREELVDAWGSRVQTGLFRSPLTAFLYERGWRQNFKAAGFPGIDVEFNEVQRWFRP-----------------AAGGVVVDMSCGSGLMTRRLVKSSVYGRVLALDYSEAMLQETARRVQEEGVSTKALTLCRADVAALPLRPTSIDAMHAGAAMHCWPRLEEGLRQIRQVLRPGGLFYATTFLQGAYGSGMPRQTGGSSFRFFRDADELRLLLVDAGFEPSSVTVRIEGRGCAVIKAV 321
BLAST of EWM24600.1 vs. NCBI_GenBank
Match: gi|298713179|emb|CBJ26935.1| (S-adenosyl-L-methionine-dependent methyltransferases-like [Ectocarpus siliculosus]) HSP 1 Score: 223.787 bits (569), Expect = 4.228e-65 Identity = 138/332 (41.57%), Postives = 176/332 (53.01%), Query Frame = 0 Query: 67 IDAHELRGVLKDALYRSLGNEATTSSRAENYDAMEHVLACPLTLKPLRRVVRLAGPFGQVVNMVTTR------GNKYPANEVYMDLVPAEERMQVPFFSPSAIVTQELFRSPLTSFLYERGWRDNFKTAGFPGIDEEFRDLEAFFAPLSDAGSESEREGEQQRRSGRGTVIDLSCGSGLTARRLCRSRKWKRVIAADFSESMLRETRRRFLEEKLPVPELVRADASRQPFQTSSVDAIHAGAALHCWPRLEESLRECLRVLKPGGRMYASTFEVNERLQSNT-------------FRFFQLDELRRLFVSSGFVEVEVRREGVACLIVKAVK 379 + E R +K AL G + + +LACP TL L VR G G +V + G KYP ++D AE S V + F++PL S+LYERGWR F GFPGIDEEFR +F S G++ + VIDLSCGSGL RRL S ++ RVI D S +ML ET RRF EE L PEL+R D SR P +T S+D +HAGAALHCW +LEESL E RVLKPG +A+TF +N + NT F+FF+L EL +L ++GF +V+V +EG AC IV+A K Sbjct: 156 VKEDEKRAAVKSALLGVFGETVKDGDEGQATPG-DPILACPSTLGDLTDGVRWYGGVGPGSLLVAYKSSDKRPGVKYPIGTEFVDF--AEPLKPTWSLSRGEAVKEGTFQTPLVSWLYERGWRQGFSANGFPGIDEEFRLASEYF---SSTGADGK------------AVIDLSCGSGLMMRRLVSSGRYSRVIGGDLSPTMLAETARRFREEDLGAPELIRCDVSRLPLKTESLDGVHAGAALHCWSKLEESLSEVHRVLKPGRGFFATTF-LNSAVLGNTAGNTVGNSRRRDGFKFFELAELEQLMRNAGFEDVKVVKEGRACAIVRATK 468
BLAST of EWM24600.1 vs. NCBI_GenBank
Match: gi|551598657|ref|XP_005781281.1| (hypothetical protein EMIHUDRAFT_442892 [Emiliania huxleyi CCMP1516] >gi|485634028|gb|EOD28852.1| hypothetical protein EMIHUDRAFT_442892 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 190.274 bits (482), Expect = 2.149e-52 Identity = 116/281 (41.28%), Postives = 160/281 (56.94%), Query Frame = 0 Query: 130 VTTRGNKYP-ANEVYMDLVPAEERMQVPFFSPSAIVTQ-----------ELFRSPLTSFLYERGWRDNFKTAGFPGIDEEFRDLEAFFAPLSDAGSESEREGEQQRRSGRGTVIDLSCGSGLTARRLCRSR--KWKRVIAADFSESMLRETRRRFLEEKL--PVPELVRADASRQPFQTSSVDAIHAGAALHCWPRLEESLRECLRVLKP-GGRMYASTF------------EVNERLQSNTFRFFQL-DELRRLFVSSGF--VEVEVRREGVACLIVKAV 378 V+ G +YP A+ Y+DL+ + R +P + + ++FR+P+ FLYERGWR F+ AGFPGI++E+ ++ AFF P++ GRG V+D+SCGSGL RRL R R +A D+SE ML+ETRRR LE+ L EL+R D ++ P + +VDA+HAGAALH WP LE+ L E RVL+P GGR +A+TF +FRFF+ +ELR+L +++GF V VRREG C IVKAV Sbjct: 59 VSAGGVRYPVADGEYVDLLASSGRGDGDGITPGRLAEEVREAFATRTQTQMFRTPVLGFLYERGWRQQFRAAGFPGIEKEYDEVSAFFEPVAA--------------QGRGVVVDMSCGSGLMYRRLLAGRIGGSGRTLACDYSEVMLKETRRRALEQGLAPAALELLRCDVAQLPMRDGAVDAMHAGAALHSWPNLEKGLSEIRRVLRPDGGRFFATTFLRGAYPGTTSATPGQSGGGGGSFRFFESEEELRQLLIAAGFPPDGVSVRREGRGCAIVKAV 325
BLAST of EWM24600.1 vs. NCBI_GenBank
Match: gi|475530558|gb|EMT07919.1| (Putative methyltransferase [Aegilops tauschii]) HSP 1 Score: 186.037 bits (471), Expect = 8.668e-52 Identity = 126/351 (35.90%), Postives = 178/351 (50.71%), Query Frame = 0 Query: 41 CVCFSAPSPSVSIAPTPPTNPAEASPIDAHELRGVLKDALYRSLGNEATTSSRAENYDAMEHVLACPLTLKPLRRVVRLAGPFGQVVNMVTTRGNK-------YPANEVYMDLVPAEERMQVPFFSPSAIVTQELFRSPLTSFLYERGWRDNFKTAGFPGIDEEFRDLEAFFAPLSDAGSESEREGEQQRRSGRGTVIDLSCGSGLTARRLCRSRKWKRVIAADFSESMLRETRRRFLEEKLPVPE---LVRADASRQPFQTSSVDAIHAGAALHCWPRLEESLRECLRVLKPGGRMYASTFEVNERLQSNTFRFFQLDELRRLF--VSSG---FVEVEVRREGVACLIVK 376 C CF +PS S A P T A ++A RG ++ + E + + E V ACP+ +PL R GP G + + G K + + +V++DL + P+ ELFRSPL SFLYERGWR NF +GFPG DEEF+ + +F P++ G ++D+SCGSGL +R+ S + VIA DFSE+MLR+ +E+ P+ LVRAD SR PF + S+DAIHAGAA+HCWP ++ E RVLKPGG A+TF ++ S F L LR++ V+S F E E++ ++C +V Sbjct: 25 CGCFGSPSLPGSGAERPHTGSVRAGQVEA--TRGGHGGVQFQEIKTELNDTPKTE-------VFACPVCYEPLIR----KGPPGMNLPAIYRSGFKCSKCNKSFTSKDVFLDLTVTSGMKEYSELKPA---RTELFRSPLVSFLYERGWRQNFNRSGFPGRDEEFQMAQDYFKPVAG-----------------GILVDVSCGSGLFSRKFASSGAYSAVIALDFSENMLRQCYDYIRQEETPMNTNLALVRADISRLPFASCSIDAIHAGAAIHCWPSPSNAIAEISRVLKPGGVFVATTF-LSTPTNSGPFSIDALRPLRQIVGPVNSSYNFFTEGELKDLCISCGLVN 341
BLAST of EWM24600.1 vs. NCBI_GenBank
Match: gi|551643973|ref|XP_005824779.1| (hypothetical protein GUITHDRAFT_116106 [Guillardia theta CCMP2712] >gi|428168859|gb|EKX37799.1| hypothetical protein GUITHDRAFT_116106 [Guillardia theta CCMP2712]) HSP 1 Score: 181.415 bits (459), Expect = 5.336e-50 Identity = 104/228 (45.61%), Postives = 138/228 (60.53%), Query Frame = 0 Query: 166 QELFRSPLTSFLYERGWRDNFKTAGFPGIDEEFRDLEAFFAPLSDAGSESEREGEQQRRSGRGTVIDLSCGSGLTARRLCRSRKWKR-------VIAADFSESMLRETRRRFLEEKLPVPELVRADASRQPFQTSSVDAIHAGAALHCWPRLEESLRECLRVLKPGGRMYASTF------EVNERLQSN------TFRFFQLDELRRLFVSSGFVEVEVRREGVACLI 374 QELFR+P+ S+LYERGWR F +AGFPGI++E+ + FF Q+ R+ TV+DLSCGSGL RRL +SR + + VIA D+SE+ML E +R EE P +++RAD + PF S+DAIH+GAALHCWP +++ L+E RVLKPGGR +ASTF EV LQ+N +RFF ++EL L +GF +V V R LI Sbjct: 147 QELFRTPVVSWLYERGWRAGFASAGFPGIEKEYELVMDFF---------------QEARNK--TVVDLSCGSGLMVRRLAKSRAYSKAMGERLQVIAVDYSENMLGEVIQRKKEENCPDFDIIRADVASLPFVDGSLDAIHSGAALHCWPYVQDGLKEVHRVLKPGGRFFASTFLWGVPDEVIS-LQANLGPRQRQYRFFSVEELEWLMRGAGFKDVNVERRDRCALI 356
BLAST of EWM24600.1 vs. NCBI_GenBank
Match: gi|695003722|ref|XP_009386973.1| (PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic [Musa acuminata subsp. malaccensis]) HSP 1 Score: 179.874 bits (455), Expect = 1.391e-49 Identity = 114/309 (36.89%), Postives = 161/309 (52.10%), Query Frame = 0 Query: 92 SRAENYDAME-HVLACPLTLKPLRRVVRLAGPFGQVVNMVTTRGNK-------YPANEVYMDLVPAEERMQVPFFSPSAIVTQELFRSPLTSFLYERGWRDNFKTAGFPGIDEEFRDLEAFFAPLSDAGSESEREGEQQRRSGRGTVIDLSCGSGLTARRLCRSRKWKRVIAADFSESMLRETRRRFLEEKLPVPE---LVRADASRQPFQTSSVDAIHAGAALHCWPRLEESLRECLRVLKPGGRMYASTFEVN--------ERLQS---------NTFRFFQLDELRRLFVSSGFVEV--EVRREGV 370 +R ++ D+M+ +LACP+ +PL R GP G V + G K + + +VY+DL + F P+ ELFRSPL SFLYERGWR NF +GFPG+DEEF + +F P++ G ++D+SCGSGL +R+ +S + V+A DFSE+MLR+ ++ + LVRAD SR PF + S+DA+HAGAALHCWP ++ E RVL+ GG A+TF V+ E QS N++ +F E+ L S G V VRR + Sbjct: 62 TRVQHNDSMDLQLLACPICYEPLIR----KGPAGLNVPSIYRSGFKCQKCNKSFTSKDVYLDLTITSGTTEYSEFKPA---RTELFRSPLVSFLYERGWRQNFNRSGFPGLDEEFNMAQEYFKPVAG-----------------GLLVDVSCGSGLFSRKFAKSGSFSAVVALDFSENMLRQCYEFIKQDDTLITTNLALVRADVSRLPFASGSIDAVHAGAALHCWPSPSNAVAEISRVLRSGGVFVATTFLVSPLNTPLPLEAFQSLRQSFGQVTNSYNYFTEKEIEDLCRSCGLVNYTSTVRRSFI 346
BLAST of EWM24600.1 vs. NCBI_GenBank
Match: gi|685302518|ref|XP_009141962.1| (PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic [Brassica rapa]) HSP 1 Score: 176.022 bits (445), Expect = 5.573e-48 Identity = 111/303 (36.63%), Postives = 152/303 (50.17%), Query Frame = 0 Query: 86 NEATTSSRAENYDAMEHVLACPLTLKPLRRVVRLAGPFGQVVNMVTTRGNK-------YPANEVYMDLVPAEERMQVPFFSPSAIVTQELFRSPLTSFLYERGWRDNFKTAGFPGIDEEFRDLEAFFAPLSDAGSESEREGEQQRRSGRGTVIDLSCGSGLTARRLCRSRKWKRVIAADFSESMLRETRRRFLEEKLPVPE-----LVRADASRQPFQTSSVDAIHAGAALHCWPRLEESLRECLRVLKPGGRMYASTF------------EVNERLQSNTFRFFQLDELRRLFVSSGFVEVE 364 NE +S + E V ACP+ +PL R GP G + + G K Y + + Y+DL F+ +T ELFRSPL SFLYERGWR NF +GFPG DEEFR E +F E EG G ++D+SCGSGL +R+ +S K+ VIA D+SE+MLR+ F+++ +VRAD SR PF + SVDA+HAGAALHCWP ++ E RVL+ GG +TF R+ N + + DE++ + + G + E Sbjct: 64 NETPSSDKKETETVETQVFACPVCYEPLMR----KGPSGINLQAIYRSGFKCGQCNKTYSSKDEYLDLTVT---AGFDSFNEVKPITTELFRSPLVSFLYERGWRQNFARSGFPGPDEEFRMAEEYF---------KEAEG--------GVLVDVSCGSGLFSRKFAKSGKYSGVIALDYSENMLRQC-NEFIKKDTTFDSSTNIAVVRADVSRLPFASGSVDAVHAGAALHCWPSPTNAIAEICRVLRSGGVFVGTTFLRYSPSTPWIIRPFQSRILQN-YNYLMQDEIKDVCTTCGLTDYE 340 The following BLAST results are available for this feature:
BLAST of EWM24600.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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