EWM24593.1, cds6080 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|585106109|gb|EWM24593.1| (cwf19-like protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 585.104 bits (1507), Expect = 0.000e+0 Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0
Query: 1 MGVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGKLTVGFLSQRHTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPYSVFRTAGMASHKWEGSGGQGEAGRRTCPPASLPTTCNVVSRTMEWWLEFGSRRERILPSSPLRGTRRHARPWMPGASPLAVLACG 287
MGVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGKLTVGFLSQRHTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPYSVFRTAGMASHKWEGSGGQGEAGRRTCPPASLPTTCNVVSRTMEWWLEFGSRRERILPSSPLRGTRRHARPWMPGASPLAVLACG
Sbjct: 1 MGVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGKLTVGFLSQRHTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPYSVFRTAGMASHKWEGSGGQGEAGRRTCPPASLPTTCNVVSRTMEWWLEFGSRRERILPSSPLRGTRRHARPWMPGASPLAVLACG 287
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|553191580|ref|XP_005855404.1| (cwf19-1-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|553193677|ref|XP_005855815.1| cwf19-like 1-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293243|gb|EKU20543.1| cwf19-like 1-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293653|gb|EKU20953.1| cwf19-1-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 352.443 bits (903), Expect = 5.639e-120 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query: 1 MGVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGKLTVGFLSQRHTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKW 173
MGVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGKLTVGFLSQRHTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKW
Sbjct: 66 MGVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGKLTVGFLSQRHTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKW 238
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|676395355|ref|XP_009040955.1| (hypothetical protein AURANDRAFT_67238 [Aureococcus anophagefferens] >gi|323448500|gb|EGB04398.1| hypothetical protein AURANDRAFT_67238 [Aureococcus anophagefferens]) HSP 1 Score: 137.887 bits (346), Expect = 3.069e-33 Identity = 84/214 (39.25%), Postives = 120/214 (56.07%), Query Frame = 0
Query: 3 VKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGK---------LTVGFLSQRHTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMG-VRD----AAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPY 202
V E P+PT+ +E P+ SA V G + P TYLG G+ V + ++V F + + +++ + F+G D+FLS+DW +G G D +A+ +RD A G VA+ AV RPRYHFA G ++ R PY+N P + SHVTRF++L A+ +K+K RKWLHA+ ++PIPY LAAL EPA T+SPY
Sbjct: 48 VPEAPVPTWVLELPAGSA------VAAGDSLGPNVTYLGACGVTTVSERAGGSGAKVMSVAFAGGAGS---VAGLLDACGAPGFMGCDVFLSSDWPRGCDVGADDAAVASLRDLGVYAHAVGDDRVAEAAVACRPRYHFAGTHGAFWARAPYRNARDPPAHRKSHVTRFVALGQAAKSKDKRRKWLHAVDVDPIPYCALAALAAEPAGCTDSPY 252
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|919025856|ref|XP_013396694.1| (PREDICTED: CWF19-like protein 1 isoform X2 [Lingula anatina]) HSP 1 Score: 121.324 bits (303), Expect = 1.173e-27 Identity = 86/243 (35.39%), Postives = 123/243 (50.62%), Query Frame = 0
Query: 2 GVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGK--LTVGFLSQRHTDK---------DIEKIVEP--ASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPYSVF--------RTAGMASHKWEGSGGQGE 223
G + P+ T FI GPS + V G ++ TYLG G+ G L + +L + D+ D+ I P SS + G DI L++ W +GV Y A V D+ TGSS +A LAV L+PRYHF+ G +++R PY+NH +S HVTRFL+L A V ++ +KWL+A++I P+ M LV +P DVTE PY + ++ SGGQG+
Sbjct: 22 GNLKAPIST-FILGPSKEHHGDHFKDVNGTELCDNITYLGKKGV-FSGSSGLQIAYLCGKEGDESDASHFSSEDLNSIRVPLQTDSSNYKGVDILLTSQWPRGVEK-YGSKAEEV-DSNTTGSSFIAQLAVDLKPRYHFSGLEGTFYERQPYRNHKVLAESA-KHVTRFLAL--AKVGNKEKKKWLYAMNIVPLNKMNSEELVKQPEDVTECPYKNIPVQAKPKAQEESSTQFFYDMSGGQGK 257
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|919025854|ref|XP_013396693.1| (PREDICTED: CWF19-like protein 1 isoform X1 [Lingula anatina]) HSP 1 Score: 121.324 bits (303), Expect = 1.523e-27 Identity = 86/243 (35.39%), Postives = 123/243 (50.62%), Query Frame = 0
Query: 2 GVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGK--LTVGFLSQRHTDK---------DIEKIVEP--ASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPYSVF--------RTAGMASHKWEGSGGQGE 223
G + P+ T FI GPS + V G ++ TYLG G+ G L + +L + D+ D+ I P SS + G DI L++ W +GV Y A V D+ TGSS +A LAV L+PRYHF+ G +++R PY+NH +S HVTRFL+L A V ++ +KWL+A++I P+ M LV +P DVTE PY + ++ SGGQG+
Sbjct: 58 GNLKAPIST-FILGPSKEHHGDHFKDVNGTELCDNITYLGKKGV-FSGSSGLQIAYLCGKEGDESDASHFSSEDLNSIRVPLQTDSSNYKGVDILLTSQWPRGVEK-YGSKAEEV-DSNTTGSSFIAQLAVDLKPRYHFSGLEGTFYERQPYRNHKVLAESA-KHVTRFLAL--AKVGNKEKKKWLYAMNIVPLNKMNSEELVKQPEDVTECPYKNIPVQAKPKAQEESSTQFFYDMSGGQGK 293
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|1188118857|ref|XP_020781966.1| (CWF19-like protein 1 isoform X1 [Boleophthalmus pectinirostris]) HSP 1 Score: 120.553 bits (301), Expect = 2.940e-27 Identity = 77/214 (35.98%), Postives = 117/214 (54.67%), Query Frame = 0
Query: 2 GVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGG-LELVGKLTVGFLSQRH-----------TDKDIEKIVEP-ASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPY 202
G+++ P+ TY + G ++ KY S G ++ TYLG G L V L + ++S R T KD+ +VEP ++S F G DI L++ W +GV + D GS+++A LA L+PRYHFA GIY++R PY+NH + HV+RF++L A+V+ +K+L+A +I P+ M LV +P DVTE+PY
Sbjct: 61 GLRKAPIHTYIL-GAASPEMTKYFSSASGCELCENITYLGRQGVLSGVSGLQIAYVSGREASQEPAPSHCFTSKDLCSLVEPLINNSKFRGVDILLTSQWPKGV---WHYGNTPEVDTKTCGSNSIASLADKLKPRYHFAGLEGIYYERLPYRNHVVL-QENAQHVSRFIAL--ANVSNPAKKKYLYAFNIIPMKSMDPVELVKQPQDVTENPY 267
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|1190400243|ref|XP_020850215.1| (CWF19-like protein 1 [Phascolarctos cinereus]) HSP 1 Score: 120.939 bits (302), Expect = 3.825e-27 Identity = 80/214 (37.38%), Postives = 116/214 (54.21%), Query Frame = 0
Query: 2 GVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLEL-VGKLTVGFLS-----------QRHTDKDIEKI-VEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPY 202
GVK+ P+ TY + G + KY V G ++ TYLG G+ L + +LS T KD+ + S+S F G D+ L++ W +GV G +A G D GSS ++ LA+ L+PRYHFAA Y++R PY+NH ++ HVTRF++L A+V + RK+L+A SI P+ M +A LV +P DVTE+PY
Sbjct: 154 GVKKAPIQTYVL-GANDQEAVKYFPDVDGCELAENITYLGRKGVFTGASGLQIAYLSGTESLAEPAPPYSFTSKDVSSLKAALQSASQFKGVDVLLTSPWPRGV--GNFGNASGDVDTKKKGSSLISHLAMDLKPRYHFAALEKTYYERLPYRNHTVLQETA-QHVTRFIAL--ANVGNTEKRKYLYAFSILPLNLMNVAELVKQPPDVTENPY 361
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|926621019|ref|XP_013775828.1| (PREDICTED: CWF19-like protein 1 [Limulus polyphemus]) HSP 1 Score: 119.398 bits (298), Expect = 7.240e-27 Identity = 85/220 (38.64%), Postives = 123/220 (55.91%), Query Frame = 0
Query: 2 GVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKC---TYLGPGGLELVGK--LTVGFLS----------QR---HTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHV-TRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPY 202
G K+ P+ TY + GP A+++Y ++ P D C TYLG G+ L G L V +LS Q+ ++D+E + P S G DI L+++W +G+ Y S G+ D GS VA LA ++PRYHFA GIY++R PY+NH K ++L+H TRF+SL A+VA + KWL+A SI P+ M + LV +P+DVTE P+
Sbjct: 61 GTKKAPITTYIL-GP---AKSEYETLFPARDGCELCYNITYLGKKGI-LTGSSGLKVAYLSGIESSGKRELQKACEFNEQDVESVHIPVSKGNEKGVDILLTSEWPKGITH-YVGSPKGL-DLKDVGSELVAQLAFYVKPRYHFAGLHGIYYERLPYRNH--KVLAELAHHPTRFISL--ANVANVQKDKWLYAFSITPMSAMDKSDLVKQPSDVTECPF 269
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|1137521530|ref|XP_019908907.1| (PREDICTED: CWF19-like protein 1 isoform X2 [Esox lucius]) HSP 1 Score: 119.013 bits (297), Expect = 1.084e-26 Identity = 73/215 (33.95%), Postives = 122/215 (56.74%), Query Frame = 0
Query: 2 GVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGK--LTVGFLSQR--HTD---------KDIEKIVEPA-SSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPY 202
G K+ P+ TY + G ++ ++ G ++ TYLG G+ G L + ++S R H D KD+ ++VEP S++ F G DI L+++W +GV + + + G++++A LA L+PRYHFAA G+Y++R PY+NH + HV+RF++L A+V + RK+L+A +I P+ M ++ L+ +P DVTE+PY
Sbjct: 61 GAKKAPIHTYIL-GAASQETLRFFPSADGCELADNITYLGRRGV-FTGASGLQIAYVSGREGHQDPAPAHCFSPKDLTQLVEPLHSNNKFRGVDILLTSEWPRGV---WQYANSPEVNTKFCGTNSIAHLANKLKPRYHFAAIEGVYYERLPYRNHVVL-QENTQHVSRFIAL--ATVNNSEKRKYLYAFNIVPMKSMEISELIKQPQDVTENPY 267
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|884965513|ref|XP_012992778.1| (PREDICTED: CWF19-like protein 1 isoform X1 [Esox lucius]) HSP 1 Score: 119.013 bits (297), Expect = 1.101e-26 Identity = 73/215 (33.95%), Postives = 122/215 (56.74%), Query Frame = 0
Query: 2 GVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGK--LTVGFLSQR--HTD---------KDIEKIVEPA-SSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPY 202
G K+ P+ TY + G ++ ++ G ++ TYLG G+ G L + ++S R H D KD+ ++VEP S++ F G DI L+++W +GV + + + G++++A LA L+PRYHFAA G+Y++R PY+NH + HV+RF++L A+V + RK+L+A +I P+ M ++ L+ +P DVTE+PY
Sbjct: 61 GAKKAPIHTYIL-GAASQETLRFFPSADGCELADNITYLGRRGV-FTGASGLQIAYVSGREGHQDPAPAHCFSPKDLTQLVEPLHSNNKFRGVDILLTSEWPRGV---WQYANSPEVNTKFCGTNSIAHLANKLKPRYHFAAIEGVYYERLPYRNHVVL-QENTQHVSRFIAL--ATVNNSEKRKYLYAFNIVPMKSMEISELIKQPQDVTENPY 267 The following BLAST results are available for this feature:
BLAST of EWM24593.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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