EWM24593.1, cds6080 (CDS) Nannochloropsis gaditana

Overview
NameEWM24593.1
Unique Namecds6080
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:552943..553620 +
Alignment locationCM002467.1:553822..554007 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24593.1
Productcwf19-like protein 1
Orig transcript idgnl|cribi|Naga_100062g11.916.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:552943..553620 +
CM002467.1supercontigCM002467.1:553822..554007 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|585106109|gb|EWM24593.1| (cwf19-like protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 585.104 bits (1507), Expect = 0.000e+0
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0
Query:    1 MGVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGKLTVGFLSQRHTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPYSVFRTAGMASHKWEGSGGQGEAGRRTCPPASLPTTCNVVSRTMEWWLEFGSRRERILPSSPLRGTRRHARPWMPGASPLAVLACG 287
            MGVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGKLTVGFLSQRHTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPYSVFRTAGMASHKWEGSGGQGEAGRRTCPPASLPTTCNVVSRTMEWWLEFGSRRERILPSSPLRGTRRHARPWMPGASPLAVLACG
Sbjct:    1 MGVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGKLTVGFLSQRHTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPYSVFRTAGMASHKWEGSGGQGEAGRRTCPPASLPTTCNVVSRTMEWWLEFGSRRERILPSSPLRGTRRHARPWMPGASPLAVLACG 287          
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|553191580|ref|XP_005855404.1| (cwf19-1-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|553193677|ref|XP_005855815.1| cwf19-like 1-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293243|gb|EKU20543.1| cwf19-like 1-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293653|gb|EKU20953.1| cwf19-1-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 352.443 bits (903), Expect = 5.639e-120
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query:    1 MGVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGKLTVGFLSQRHTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKW 173
            MGVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGKLTVGFLSQRHTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKW
Sbjct:   66 MGVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGKLTVGFLSQRHTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKW 238          
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|676395355|ref|XP_009040955.1| (hypothetical protein AURANDRAFT_67238 [Aureococcus anophagefferens] >gi|323448500|gb|EGB04398.1| hypothetical protein AURANDRAFT_67238 [Aureococcus anophagefferens])

HSP 1 Score: 137.887 bits (346), Expect = 3.069e-33
Identity = 84/214 (39.25%), Postives = 120/214 (56.07%), Query Frame = 0
Query:    3 VKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGK---------LTVGFLSQRHTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMG-VRD----AAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPY 202
            V E P+PT+ +E P+ SA      V  G  + P  TYLG  G+  V +         ++V F     +   +  +++   +  F+G D+FLS+DW +G   G D +A+  +RD    A   G   VA+ AV  RPRYHFA   G ++ R PY+N    P  + SHVTRF++L  A+ +K+K RKWLHA+ ++PIPY  LAAL  EPA  T+SPY
Sbjct:   48 VPEAPVPTWVLELPAGSA------VAAGDSLGPNVTYLGACGVTTVSERAGGSGAKVMSVAFAGGAGS---VAGLLDACGAPGFMGCDVFLSSDWPRGCDVGADDAAVASLRDLGVYAHAVGDDRVAEAAVACRPRYHFAGTHGAFWARAPYRNARDPPAHRKSHVTRFVALGQAAKSKDKRRKWLHAVDVDPIPYCALAALAAEPAGCTDSPY 252          
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|919025856|ref|XP_013396694.1| (PREDICTED: CWF19-like protein 1 isoform X2 [Lingula anatina])

HSP 1 Score: 121.324 bits (303), Expect = 1.173e-27
Identity = 86/243 (35.39%), Postives = 123/243 (50.62%), Query Frame = 0
Query:    2 GVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGK--LTVGFLSQRHTDK---------DIEKIVEP--ASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPYSVF--------RTAGMASHKWEGSGGQGE 223
            G  + P+ T FI GPS      +   V G ++    TYLG  G+   G   L + +L  +  D+         D+  I  P    SS + G DI L++ W +GV   Y   A  V D+  TGSS +A LAV L+PRYHF+   G +++R PY+NH    +S   HVTRFL+L  A V  ++ +KWL+A++I P+  M    LV +P DVTE PY           +        ++ SGGQG+
Sbjct:   22 GNLKAPIST-FILGPSKEHHGDHFKDVNGTELCDNITYLGKKGV-FSGSSGLQIAYLCGKEGDESDASHFSSEDLNSIRVPLQTDSSNYKGVDILLTSQWPRGVEK-YGSKAEEV-DSNTTGSSFIAQLAVDLKPRYHFSGLEGTFYERQPYRNHKVLAESA-KHVTRFLAL--AKVGNKEKKKWLYAMNIVPLNKMNSEELVKQPEDVTECPYKNIPVQAKPKAQEESSTQFFYDMSGGQGK 257          
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|919025854|ref|XP_013396693.1| (PREDICTED: CWF19-like protein 1 isoform X1 [Lingula anatina])

HSP 1 Score: 121.324 bits (303), Expect = 1.523e-27
Identity = 86/243 (35.39%), Postives = 123/243 (50.62%), Query Frame = 0
Query:    2 GVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGK--LTVGFLSQRHTDK---------DIEKIVEP--ASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPYSVF--------RTAGMASHKWEGSGGQGE 223
            G  + P+ T FI GPS      +   V G ++    TYLG  G+   G   L + +L  +  D+         D+  I  P    SS + G DI L++ W +GV   Y   A  V D+  TGSS +A LAV L+PRYHF+   G +++R PY+NH    +S   HVTRFL+L  A V  ++ +KWL+A++I P+  M    LV +P DVTE PY           +        ++ SGGQG+
Sbjct:   58 GNLKAPIST-FILGPSKEHHGDHFKDVNGTELCDNITYLGKKGV-FSGSSGLQIAYLCGKEGDESDASHFSSEDLNSIRVPLQTDSSNYKGVDILLTSQWPRGVEK-YGSKAEEV-DSNTTGSSFIAQLAVDLKPRYHFSGLEGTFYERQPYRNHKVLAESA-KHVTRFLAL--AKVGNKEKKKWLYAMNIVPLNKMNSEELVKQPEDVTECPYKNIPVQAKPKAQEESSTQFFYDMSGGQGK 293          
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|1188118857|ref|XP_020781966.1| (CWF19-like protein 1 isoform X1 [Boleophthalmus pectinirostris])

HSP 1 Score: 120.553 bits (301), Expect = 2.940e-27
Identity = 77/214 (35.98%), Postives = 117/214 (54.67%), Query Frame = 0
Query:    2 GVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGG-LELVGKLTVGFLSQRH-----------TDKDIEKIVEP-ASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPY 202
            G+++ P+ TY + G ++    KY S   G ++    TYLG  G L  V  L + ++S R            T KD+  +VEP  ++S F G DI L++ W +GV   +        D    GS+++A LA  L+PRYHFA   GIY++R PY+NH    +    HV+RF++L  A+V+    +K+L+A +I P+  M    LV +P DVTE+PY
Sbjct:   61 GLRKAPIHTYIL-GAASPEMTKYFSSASGCELCENITYLGRQGVLSGVSGLQIAYVSGREASQEPAPSHCFTSKDLCSLVEPLINNSKFRGVDILLTSQWPKGV---WHYGNTPEVDTKTCGSNSIASLADKLKPRYHFAGLEGIYYERLPYRNHVVL-QENAQHVSRFIAL--ANVSNPAKKKYLYAFNIIPMKSMDPVELVKQPQDVTENPY 267          
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|1190400243|ref|XP_020850215.1| (CWF19-like protein 1 [Phascolarctos cinereus])

HSP 1 Score: 120.939 bits (302), Expect = 3.825e-27
Identity = 80/214 (37.38%), Postives = 116/214 (54.21%), Query Frame = 0
Query:    2 GVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLEL-VGKLTVGFLS-----------QRHTDKDIEKI-VEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPY 202
            GVK+ P+ TY + G +     KY   V G ++    TYLG  G+      L + +LS              T KD+  +     S+S F G D+ L++ W +GV  G   +A G  D    GSS ++ LA+ L+PRYHFAA    Y++R PY+NH    ++   HVTRF++L  A+V   + RK+L+A SI P+  M +A LV +P DVTE+PY
Sbjct:  154 GVKKAPIQTYVL-GANDQEAVKYFPDVDGCELAENITYLGRKGVFTGASGLQIAYLSGTESLAEPAPPYSFTSKDVSSLKAALQSASQFKGVDVLLTSPWPRGV--GNFGNASGDVDTKKKGSSLISHLAMDLKPRYHFAALEKTYYERLPYRNHTVLQETA-QHVTRFIAL--ANVGNTEKRKYLYAFSILPLNLMNVAELVKQPPDVTENPY 361          
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|926621019|ref|XP_013775828.1| (PREDICTED: CWF19-like protein 1 [Limulus polyphemus])

HSP 1 Score: 119.398 bits (298), Expect = 7.240e-27
Identity = 85/220 (38.64%), Postives = 123/220 (55.91%), Query Frame = 0
Query:    2 GVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKC---TYLGPGGLELVGK--LTVGFLS----------QR---HTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHV-TRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPY 202
            G K+ P+ TY + GP   A+++Y ++ P  D    C   TYLG  G+ L G   L V +LS          Q+     ++D+E +  P S     G DI L+++W +G+   Y  S  G+ D    GS  VA LA  ++PRYHFA   GIY++R PY+NH  K  ++L+H  TRF+SL  A+VA  +  KWL+A SI P+  M  + LV +P+DVTE P+
Sbjct:   61 GTKKAPITTYIL-GP---AKSEYETLFPARDGCELCYNITYLGKKGI-LTGSSGLKVAYLSGIESSGKRELQKACEFNEQDVESVHIPVSKGNEKGVDILLTSEWPKGITH-YVGSPKGL-DLKDVGSELVAQLAFYVKPRYHFAGLHGIYYERLPYRNH--KVLAELAHHPTRFISL--ANVANVQKDKWLYAFSITPMSAMDKSDLVKQPSDVTECPF 269          
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|1137521530|ref|XP_019908907.1| (PREDICTED: CWF19-like protein 1 isoform X2 [Esox lucius])

HSP 1 Score: 119.013 bits (297), Expect = 1.084e-26
Identity = 73/215 (33.95%), Postives = 122/215 (56.74%), Query Frame = 0
Query:    2 GVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGK--LTVGFLSQR--HTD---------KDIEKIVEPA-SSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPY 202
            G K+ P+ TY + G ++    ++     G ++    TYLG  G+   G   L + ++S R  H D         KD+ ++VEP  S++ F G DI L+++W +GV   +  +     +    G++++A LA  L+PRYHFAA  G+Y++R PY+NH    +    HV+RF++L  A+V   + RK+L+A +I P+  M ++ L+ +P DVTE+PY
Sbjct:   61 GAKKAPIHTYIL-GAASQETLRFFPSADGCELADNITYLGRRGV-FTGASGLQIAYVSGREGHQDPAPAHCFSPKDLTQLVEPLHSNNKFRGVDILLTSEWPRGV---WQYANSPEVNTKFCGTNSIAHLANKLKPRYHFAAIEGVYYERLPYRNHVVL-QENTQHVSRFIAL--ATVNNSEKRKYLYAFNIVPMKSMEISELIKQPQDVTENPY 267          
BLAST of EWM24593.1 vs. NCBI_GenBank
Match: gi|884965513|ref|XP_012992778.1| (PREDICTED: CWF19-like protein 1 isoform X1 [Esox lucius])

HSP 1 Score: 119.013 bits (297), Expect = 1.101e-26
Identity = 73/215 (33.95%), Postives = 122/215 (56.74%), Query Frame = 0
Query:    2 GVKEVPLPTYFIEGPSASAEAKYGSVVPGGDVFPKCTYLGPGGLELVGK--LTVGFLSQR--HTD---------KDIEKIVEPA-SSSTFLGADIFLSTDWGQGVAAGYDLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKNHASKPKSKLSHVTRFLSLAPASVAKEKARKWLHAISIEPIPYMTLAALVDEPADVTESPY 202
            G K+ P+ TY + G ++    ++     G ++    TYLG  G+   G   L + ++S R  H D         KD+ ++VEP  S++ F G DI L+++W +GV   +  +     +    G++++A LA  L+PRYHFAA  G+Y++R PY+NH    +    HV+RF++L  A+V   + RK+L+A +I P+  M ++ L+ +P DVTE+PY
Sbjct:   61 GAKKAPIHTYIL-GAASQETLRFFPSADGCELADNITYLGRRGV-FTGASGLQIAYVSGREGHQDPAPAHCFSPKDLTQLVEPLHSNNKFRGVDILLTSEWPRGV---WQYANSPEVNTKFCGTNSIAHLANKLKPRYHFAAIEGVYYERLPYRNHVVL-QENTQHVSRFIAL--ATVNNSEKRKYLYAFNIVPMKSMEISELIKQPQDVTENPY 267          
The following BLAST results are available for this feature:
BLAST of EWM24593.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106109|gb|EWM24593.1|0.000e+0100.00cwf19-like protein 1 [Nannochloropsis gaditana][more]
gi|553191580|ref|XP_005855404.1|5.639e-120100.00cwf19-1-like protein, partial [Nannochloropsis gad... [more]
gi|676395355|ref|XP_009040955.1|3.069e-3339.25hypothetical protein AURANDRAFT_67238 [Aureococcus... [more]
gi|919025856|ref|XP_013396694.1|1.173e-2735.39PREDICTED: CWF19-like protein 1 isoform X2 [Lingul... [more]
gi|919025854|ref|XP_013396693.1|1.523e-2735.39PREDICTED: CWF19-like protein 1 isoform X1 [Lingul... [more]
gi|1188118857|ref|XP_020781966.1|2.940e-2735.98CWF19-like protein 1 isoform X1 [Boleophthalmus pe... [more]
gi|1190400243|ref|XP_020850215.1|3.825e-2737.38CWF19-like protein 1 [Phascolarctos cinereus][more]
gi|926621019|ref|XP_013775828.1|7.240e-2738.64PREDICTED: CWF19-like protein 1 [Limulus polyphemu... [more]
gi|1137521530|ref|XP_019908907.1|1.084e-2633.95PREDICTED: CWF19-like protein 1 isoform X2 [Esox l... [more]
gi|884965513|ref|XP_012992778.1|1.101e-2633.95PREDICTED: CWF19-like protein 1 isoform X1 [Esox l... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6095rna6095Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications