EWM24605.1, cds6068 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24605.1 vs. NCBI_GenBank
Match: gi|585106122|gb|EWM24605.1| (BolA-like family protein [Nannochloropsis gaditana]) HSP 1 Score: 315.849 bits (808), Expect = 5.711e-109 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 Query: 1 MLGRVPSFLVRSCARAEAPITSSALPVRLQSPSSRTMSNSATCAKRDHSAQLGGPIQSCIERKLQAALVPAHLQVINESHSHNVPKGSETHFKVVAVSSMFEGKALLARHRLINGLLSEELEAGIHALSIVAKTASEWEKAEGAVPPSPACRGGSQK 157 MLGRVPSFLVRSCARAEAPITSSALPVRLQSPSSRTMSNSATCAKRDHSAQLGGPIQSCIERKLQAALVPAHLQVINESHSHNVPKGSETHFKVVAVSSMFEGKALLARHRLINGLLSEELEAGIHALSIVAKTASEWEKAEGAVPPSPACRGGSQK Sbjct: 1 MLGRVPSFLVRSCARAEAPITSSALPVRLQSPSSRTMSNSATCAKRDHSAQLGGPIQSCIERKLQAALVPAHLQVINESHSHNVPKGSETHFKVVAVSSMFEGKALLARHRLINGLLSEELEAGIHALSIVAKTASEWEKAEGAVPPSPACRGGSQK 157
BLAST of EWM24605.1 vs. NCBI_GenBank
Match: gi|909578210|ref|XP_013144956.1| (PREDICTED: bolA-like protein DDB_G0274169 isoform X2 [Papilio polytes]) HSP 1 Score: 137.887 bits (346), Expect = 3.719e-39 Identity = 68/130 (52.31%), Postives = 89/130 (68.46%), Query Frame = 0 Query: 28 RLQSPSSRTMSNSATCAKRDHSAQLGGPIQSCIERKLQAALVPAHLQVINESHSHNVPKGSETHFKVVAVSSMFEGKALLARHRLINGLLSEELEAGIHALSIVAKTASEWEKAEGAVPPSPACRGGSQK 157 RL++P+ R + N T G + + I+ KLQ AL HL+VINES+ HNVPKG+ETHFKVV VS F+G AL+ RHRL+N +L EEL+ G+HALSIVAKT +W+++E V SP+CRGG K Sbjct: 6 RLRTPTLR-LVNMGTET---------GVVANSIQNKLQTALEATHLEVINESYMHNVPKGAETHFKVVVVSDKFDGLALIKRHRLVNDILKEELKNGVHALSIVAKTTKQWDESEKIVESSPSCRGGFGK 125
BLAST of EWM24605.1 vs. NCBI_GenBank
Match: gi|943978880|ref|XP_014370362.1| (PREDICTED: bolA-like protein DDB_G0274169 [Papilio machaon] >gi|930664861|gb|KPJ05992.1| BolA-like protein [Papilio machaon]) HSP 1 Score: 137.502 bits (345), Expect = 4.123e-39 Identity = 62/104 (59.62%), Postives = 77/104 (74.04%), Query Frame = 0 Query: 54 GPIQSCIERKLQAALVPAHLQVINESHSHNVPKGSETHFKVVAVSSMFEGKALLARHRLINGLLSEELEAGIHALSIVAKTASEWEKAEGAVPPSPACRGGSQK 157 G + + I KLQ AL HL VINES+ HNVPKGSETHFKVV VS F+G AL+ RHRL+N +L EEL+ G+HALSIVAKT +W+++E + SP+CRGG K Sbjct: 6 GVVANSIRNKLQTALEATHLDVINESYMHNVPKGSETHFKVVVVSDKFDGLALIKRHRLVNDILKEELQNGVHALSIVAKTTKQWDESEKIIESSPSCRGGFGK 109
BLAST of EWM24605.1 vs. NCBI_GenBank
Match: gi|909578208|ref|XP_013144955.1| (PREDICTED: bolA-like protein DDB_G0274169 isoform X1 [Papilio polytes]) HSP 1 Score: 137.887 bits (346), Expect = 5.168e-39 Identity = 62/104 (59.62%), Postives = 79/104 (75.96%), Query Frame = 0 Query: 54 GPIQSCIERKLQAALVPAHLQVINESHSHNVPKGSETHFKVVAVSSMFEGKALLARHRLINGLLSEELEAGIHALSIVAKTASEWEKAEGAVPPSPACRGGSQK 157 G + + I+ KLQ AL HL+VINES+ HNVPKG+ETHFKVV VS F+G AL+ RHRL+N +L EEL+ G+HALSIVAKT +W+++E V SP+CRGG K Sbjct: 26 GVVANSIQNKLQTALEATHLEVINESYMHNVPKGAETHFKVVVVSDKFDGLALIKRHRLVNDILKEELKNGVHALSIVAKTTKQWDESEKIVESSPSCRGGFGK 129
BLAST of EWM24605.1 vs. NCBI_GenBank
Match: gi|673023646|ref|XP_008865784.1| (hypothetical protein H310_03625, partial [Aphanomyces invadans] >gi|574479012|gb|ETW06007.1| hypothetical protein H310_03625, partial [Aphanomyces invadans]) HSP 1 Score: 137.502 bits (345), Expect = 6.652e-39 Identity = 63/101 (62.38%), Postives = 81/101 (80.20%), Query Frame = 0 Query: 54 GPIQSCIERKLQAALVPAHLQVINESHSHNVPKGSETHFKVVAVSSMFEGKALLARHRLINGLLSEELEAGIHALSIVAKTASEWEKAEGAVPPSPACRGG 154 GPI S I++KLQ A P+HL+V+NES+ HNVPKGSETHFKVV VS+ FEGK L+ RHRL+N +L++EL+ G+HALSI +KT S+W+ A V PSP+C GG Sbjct: 26 GPIFSSIQKKLQDAFQPSHLEVLNESYMHNVPKGSETHFKVVVVSAAFEGKPLIQRHRLVNQVLADELDGGVHALSIQSKTPSQWD-ANSTVRPSPSCLGG 125
BLAST of EWM24605.1 vs. NCBI_GenBank
Match: gi|1214674594|gb|OWY96780.1| (hypothetical protein PHMEG_00032869 [Phytophthora megakarya]) HSP 1 Score: 136.732 bits (343), Expect = 1.291e-38 Identity = 61/101 (60.40%), Postives = 77/101 (76.24%), Query Frame = 0 Query: 54 GPIQSCIERKLQAALVPAHLQVINESHSHNVPKGSETHFKVVAVSSMFEGKALLARHRLINGLLSEELEAGIHALSIVAKTASEWEKAEGAVPPSPACRGG 154 GP+ I KL AA P+HL VINESH HNVPKG+ETHFKVV V+ F+GKALL RHR++N +L +EL+ G+HALSI++KT +WE A + PSP+CRGG Sbjct: 6 GPVARRIHEKLLAAFAPSHLDVINESHMHNVPKGAETHFKVVVVTEQFDGKALLQRHRMVNAVLQQELDDGVHALSILSKTPKQWE-ANAQIKPSPSCRGG 105
BLAST of EWM24605.1 vs. NCBI_GenBank
Match: gi|1173944600|gb|OQR93319.1| (BolA-like protein [Achlya hypogyna]) HSP 1 Score: 136.732 bits (343), Expect = 1.293e-38 Identity = 62/101 (61.39%), Postives = 78/101 (77.23%), Query Frame = 0 Query: 54 GPIQSCIERKLQAALVPAHLQVINESHSHNVPKGSETHFKVVAVSSMFEGKALLARHRLINGLLSEELEAGIHALSIVAKTASEWEKAEGAVPPSPACRGG 154 GPI S I+ KL +A VP HL+V+NES+ HNVPKGSETHFKV+ VS +FEGK L+ RHR++N +L EEL G+HALSI +KT ++WE A V PSP C+GG Sbjct: 22 GPIFSAIQTKLASAFVPTHLEVLNESYMHNVPKGSETHFKVIVVSDLFEGKPLIQRHRMVNAVLEEELNGGVHALSIQSKTPAQWE-ANSTVRPSPTCQGG 121
BLAST of EWM24605.1 vs. NCBI_GenBank
Match: gi|568012492|gb|ETL86670.1| (hypothetical protein L917_13925 [Phytophthora parasitica] >gi|568042517|gb|ETM39842.1| hypothetical protein L914_14051 [Phytophthora parasitica] >gi|970642120|gb|KUF83907.1| BolA protein [Phytophthora nicotianae] >gi|970650639|gb|KUF89626.1| Peptidyl-prolyl cis-trans isomerase C [Phytophthora nicotianae]) HSP 1 Score: 135.961 bits (341), Expect = 2.827e-38 Identity = 61/101 (60.40%), Postives = 74/101 (73.27%), Query Frame = 0 Query: 54 GPIQSCIERKLQAALVPAHLQVINESHSHNVPKGSETHFKVVAVSSMFEGKALLARHRLINGLLSEELEAGIHALSIVAKTASEWEKAEGAVPPSPACRGG 154 GP+ I KL AA P HL VINESH HNVPKGSETHFKVV V+ F+GK L+ RHR++N +L +EL+ G+HALSI++KT +WE A V PSP CRGG Sbjct: 6 GPVSRRIHEKLLAAFTPTHLDVINESHMHNVPKGSETHFKVVVVTDQFDGKPLIQRHRMVNAVLQQELDDGVHALSILSKTPKQWE-ANAQVKPSPNCRGG 105
BLAST of EWM24605.1 vs. NCBI_GenBank
Match: gi|567954305|gb|ETK79943.1| (hypothetical protein L915_14239 [Phytophthora parasitica] >gi|567982959|gb|ETL33361.1| hypothetical protein L916_14144 [Phytophthora parasitica]) HSP 1 Score: 135.961 bits (341), Expect = 2.858e-38 Identity = 61/101 (60.40%), Postives = 74/101 (73.27%), Query Frame = 0 Query: 54 GPIQSCIERKLQAALVPAHLQVINESHSHNVPKGSETHFKVVAVSSMFEGKALLARHRLINGLLSEELEAGIHALSIVAKTASEWEKAEGAVPPSPACRGG 154 GP+ I KL AA P HL VINESH HNVPKGSETHFKVV V+ F+GK L+ RHR++N +L +EL+ G+HALSI++KT +WE A V PSP CRGG Sbjct: 6 GPVSRRIHEKLLAAFTPTHLDVINESHMHNVPKGSETHFKVVVVTDQFDGKPLIQRHRMVNAVLQQELDDGVHALSILSKTPKQWE-ANAQVKPSPNCRGG 105
BLAST of EWM24605.1 vs. NCBI_GenBank
Match: gi|570944426|gb|ETP09683.1| (hypothetical protein F441_14476 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 135.961 bits (341), Expect = 3.548e-38 Identity = 61/101 (60.40%), Postives = 74/101 (73.27%), Query Frame = 0 Query: 54 GPIQSCIERKLQAALVPAHLQVINESHSHNVPKGSETHFKVVAVSSMFEGKALLARHRLINGLLSEELEAGIHALSIVAKTASEWEKAEGAVPPSPACRGG 154 GP+ I KL AA P HL VINESH HNVPKGSETHFKVV V+ F+GK L+ RHR++N +L +EL+ G+HALSI++KT +WE A V PSP CRGG Sbjct: 20 GPVSRRIHEKLLAAFTPTHLDVINESHMHNVPKGSETHFKVVVVTDQFDGKPLIQRHRMVNAVLQQELDDGVHALSILSKTPKQWE-ANAQVKPSPNCRGG 119 The following BLAST results are available for this feature:
BLAST of EWM24605.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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