EWM30079.1, cds603 (CDS) Nannochloropsis gaditana

Overview
NameEWM30079.1
Unique Namecds603
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1502703..1503125 +
Alignment locationCM002455.1:1503306..1503427 +
Alignment locationCM002455.1:1503669..1503813 +
Alignment locationCM002455.1:1504014..1504155 +
Alignment locationCM002455.1:1504276..1504344 +
Alignment locationCM002455.1:1504563..1504614 +
Alignment locationCM002455.1:1504740..1504829 +
Alignment locationCM002455.1:1505084..1505185 +
Alignment locationCM002455.1:1505278..1505476 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30079.1
Productmajor facilitator superfamily mfs_1
Orig transcript idgnl|cribi|Naga_100173g10.4685.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1502703..1503125 +
CM002455.1supercontigCM002455.1:1503306..1503427 +
CM002455.1supercontigCM002455.1:1503669..1503813 +
CM002455.1supercontigCM002455.1:1504014..1504155 +
CM002455.1supercontigCM002455.1:1504276..1504344 +
CM002455.1supercontigCM002455.1:1504563..1504614 +
CM002455.1supercontigCM002455.1:1504740..1504829 +
CM002455.1supercontigCM002455.1:1505084..1505185 +
CM002455.1supercontigCM002455.1:1505278..1505476 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
IPR011701MFS
Homology
BLAST of EWM30079.1 vs. NCBI_GenBank
Match: gi|585112712|gb|EWM30079.1| (major facilitator superfamily mfs_1 [Nannochloropsis gaditana])

HSP 1 Score: 915.22 bits (2364), Expect = 0.000e+0
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0
Query:    1 MDLDLAQTEDAHPLSPSSPAAGSDETKETSLGSQVSSTSLEDTEDVGNEKQEGEKEKDKEEEEVEKEDVEGGSKREKREDILASSTGPAGPDTVETSHASKDTVQKQKNKKKKGGKSRKKREAQRRYGPPHLDRETIKRAKVSMRIIAFFYHLSLSVLVATWTELLLKGFDNNFSKAAAFLGTCQGVERGIQFLTAASLGNLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILAMLNAIVGDLAAGREELEGGLTQQYGRLGMAIGLAMMVGPMLGPSIQQFNVIYPLYISITLVIICVLICLSMAESLPPQNRHIKLEHSNPLWGLKKAMRYRPFLLFALPFFLSQLSESVYAFIVIYTKQRLGWSYVSVGLYISLLALTIAILQGNLRHIVPRFVSGKSLPPSWPSLPPLIPRLNMRLPTCLPLYTSLS 447
            MDLDLAQTEDAHPLSPSSPAAGSDETKETSLGSQVSSTSLEDTEDVGNEKQEGEKEKDKEEEEVEKEDVEGGSKREKREDILASSTGPAGPDTVETSHASKDTVQKQKNKKKKGGKSRKKREAQRRYGPPHLDRETIKRAKVSMRIIAFFYHLSLSVLVATWTELLLKGFDNNFSKAAAFLGTCQGVERGIQFLTAASLGNLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILAMLNAIVGDLAAGREELEGGLTQQYGRLGMAIGLAMMVGPMLGPSIQQFNVIYPLYISITLVIICVLICLSMAESLPPQNRHIKLEHSNPLWGLKKAMRYRPFLLFALPFFLSQLSESVYAFIVIYTKQRLGWSYVSVGLYISLLALTIAILQGNLRHIVPRFVSGKSLPPSWPSLPPLIPRLNMRLPTCLPLYTSLS
Sbjct:    1 MDLDLAQTEDAHPLSPSSPAAGSDETKETSLGSQVSSTSLEDTEDVGNEKQEGEKEKDKEEEEVEKEDVEGGSKREKREDILASSTGPAGPDTVETSHASKDTVQKQKNKKKKGGKSRKKREAQRRYGPPHLDRETIKRAKVSMRIIAFFYHLSLSVLVATWTELLLKGFDNNFSKAAAFLGTCQGVERGIQFLTAASLGNLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILAMLNAIVGDLAAGREELEGGLTQQYGRLGMAIGLAMMVGPMLGPSIQQFNVIYPLYISITLVIICVLICLSMAESLPPQNRHIKLEHSNPLWGLKKAMRYRPFLLFALPFFLSQLSESVYAFIVIYTKQRLGWSYVSVGLYISLLALTIAILQGNLRHIVPRFVSGKSLPPSWPSLPPLIPRLNMRLPTCLPLYTSLS 447          
BLAST of EWM30079.1 vs. NCBI_GenBank
Match: gi|585112711|gb|EWM30078.1| (major facilitator superfamily mfs_1 [Nannochloropsis gaditana])

HSP 1 Score: 915.22 bits (2364), Expect = 0.000e+0
Identity = 446/447 (99.78%), Postives = 447/447 (100.00%), Query Frame = 0
Query:    1 MDLDLAQTEDAHPLSPSSPAAGSDETKETSLGSQVSSTSLEDTEDVGNEKQEGEKEKDKEEEEVEKEDVEGGSKREKREDILASSTGPAGPDTVETSHASKDTVQKQKNKKKKGGKSRKKREAQRRYGPPHLDRETIKRAKVSMRIIAFFYHLSLSVLVATWTELLLKGFDNNFSKAAAFLGTCQGVERGIQFLTAASLGNLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILAMLNAIVGDLAAGREELEGGLTQQYGRLGMAIGLAMMVGPMLGPSIQQFNVIYPLYISITLVIICVLICLSMAESLPPQNRHIKLEHSNPLWGLKKAMRYRPFLLFALPFFLSQLSESVYAFIVIYTKQRLGWSYVSVGLYISLLALTIAILQGNLRHIVPRFVSGKSLPPSWPSLPPLIPRLNMRLPTCLPLYTSLS 447
            MDLDLAQTEDAHPLSPSSPAAGSDETKETSLGSQVSSTSLEDTEDVGNEKQEGEKEKDKEEEEVEKEDVEGGSKREKREDILASSTGPAGPDTVETSHASKDTVQKQKNKKKKGGKSRKKREAQRRYGPPHLDRETIKRAKVSMRIIAFFYHLSLSVLVATWTELLLKGFDNNFSKAAAFLGTCQGVERGIQFLTAASLGNLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILAMLNAIVGDLAAGREELEGGLTQQYGRLGMAIGLAMMVGPMLGPSIQQFNV+YPLYISITLVIICVLICLSMAESLPPQNRHIKLEHSNPLWGLKKAMRYRPFLLFALPFFLSQLSESVYAFIVIYTKQRLGWSYVSVGLYISLLALTIAILQGNLRHIVPRFVSGKSLPPSWPSLPPLIPRLNMRLPTCLPLYTSLS
Sbjct:    1 MDLDLAQTEDAHPLSPSSPAAGSDETKETSLGSQVSSTSLEDTEDVGNEKQEGEKEKDKEEEEVEKEDVEGGSKREKREDILASSTGPAGPDTVETSHASKDTVQKQKNKKKKGGKSRKKREAQRRYGPPHLDRETIKRAKVSMRIIAFFYHLSLSVLVATWTELLLKGFDNNFSKAAAFLGTCQGVERGIQFLTAASLGNLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILAMLNAIVGDLAAGREELEGGLTQQYGRLGMAIGLAMMVGPMLGPSIQQFNVVYPLYISITLVIICVLICLSMAESLPPQNRHIKLEHSNPLWGLKKAMRYRPFLLFALPFFLSQLSESVYAFIVIYTKQRLGWSYVSVGLYISLLALTIAILQGNLRHIVPRFVSGKSLPPSWPSLPPLIPRLNMRLPTCLPLYTSLS 447          
BLAST of EWM30079.1 vs. NCBI_GenBank
Match: gi|553180203|ref|XP_005853362.1| (major facilitator superfamily mfs 1, partial [Nannochloropsis gaditana CCMP526] >gi|422295698|gb|EKU22997.1| major facilitator superfamily mfs 1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 297.745 bits (761), Expect = 3.897e-92
Identity = 147/291 (50.52%), Postives = 211/291 (72.51%), Query Frame = 0
Query:  127 YGPPHLDRETIKRAKVSMRIIAFFYHLSLSVLVATWTELLLKGFDNNFSKAAAFLGTCQGVERGIQFLTAASLGNLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILAMLNAIVGDLAAGREEL-EGGLTQQYGRLGMAIGLAMMVGPMLGPSIQQFNVIYPLYISITLVIICVLICLSMAESLPPQNR--HIKLEHSNPLWGLKKAMRYRPFLLFALPFFLSQLSESVYAFIVIYTKQRLGWSYVSVGLYISLLALTIAILQGNLRHIVPRFVS 414
            +G  H  ++ ++  K+  R + FFYH+S  VL  T+TELLL  F NN+S+ AAFLG C GVERG+QF ++  LGNLSD VGRRP+L  SL+L+  S + V + P   +VL YF+I+G SN  L M+NAIV DL + + +  EG L QQYGRLGMAIGL+M++GP +GP +Q+ NV+YP+Y+S+  + + ++I  SMAESL   +R  +I    +NP + L++AMR+R F LF+ PFFL+QL+E VY F+V+YTK+R GW Y+++G Y+S++ + +AI+QG+LR+ VPRFVS
Sbjct:   82 HGHNHHAKQLVRTKKLC-RALGFFYHISFGVLFTTFTELLLNDFGNNYSQTAAFLGVCAGVERGVQFFSSPVLGNLSDSVGRRPILLLSLLLHFASLMVVAILPTRHSVLIYFLINGASNVTLGMINAIVADLCSAQGKTGEGELAQQYGRLGMAIGLSMILGPAIGPVLQKMNVLYPIYLSLAFLGVSIVIAWSMAESLQACHRALNINWRKANPFFVLREAMRFRRFQLFSGPFFLNQLTECVYQFVVLYTKRRFGWGYMTLGFYVSIIGICLAIIQGSLRYFVPRFVS 371          
BLAST of EWM30079.1 vs. NCBI_GenBank
Match: gi|1134346291|ref|WP_076585785.1| (MFS transporter [Luteimonas tolerans] >gi|1131779715|emb|SIQ25891.1| MFS transporter, DHA1 family, tetracycline resistance protein [Luteimonas tolerans])

HSP 1 Score: 102.064 bits (253), Expect = 5.609e-20
Identity = 72/242 (29.75%), Postives = 123/242 (50.83%), Query Frame = 0
Query:  176 KAAAFLGTCQGVERGIQFLTAASLGNLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILAMLNAIVGDLAAGREELEGGLTQQYGRLGMAIGLAMMVGPMLGPSIQQFNVIYPLYISITLVIICVLICL-SMAESLPPQNRHIKLE--HSNPLWGLKKAMRYRPFLLFALPFFLSQLSESVY-AFIVIYTKQRLGWSYVSVGLYISLLALTIAILQG-NLRHIVPRF 412
             AA ++G    V   IQF +A   G LSD  GRRPV+  S +   +  + + + P  M +    +IS +++      NA + D+    +         +G +GMA G+  ++GPMLG  +  F++ YP + +  L ++     L  + ESLPP+ R  + E   +NP+  +K   +Y   +  A    LS L+  VY +  V+Y   R GW  ++VG  ++++ +  A++QG  +R IVP+F
Sbjct:   49 TAAWWVGIFGTVFAAIQFFSAPIQGALSDRYGRRPVILLSCLGLGLDFILMALAPSLMWLFVARVISAMTSASFTTANAYIADVTPAEKR-----AGAFGMVGMAFGVGFIIGPMLGGWLGHFDLRYPFWGAAILALLNFCYGLFVLPESLPPERRSARFEWKQANPIGSIKLIRQYPQLVGLAAILLLSNLAHYVYPSVFVLYADYRYGWGPMTVGQVLAVVGVCSALVQGLVVRRIVPKF 285          
BLAST of EWM30079.1 vs. NCBI_GenBank
Match: gi|550931819|ref|WP_022680231.1| (tetracycline resistance MFS efflux pump [Sandarakinorhabdus limnophila])

HSP 1 Score: 100.138 bits (248), Expect = 2.296e-19
Identity = 79/281 (28.11%), Postives = 134/281 (47.69%), Query Frame = 0
Query:  137 IKRAKVSMRIIAFFYHLSLSVLVATWTELLLKGFDNNFSKAAAFLGTCQGVERGIQFLTAASLGNLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILAMLNAIVGDLAAGREELEGGLTQQYGRLGMAIGLAMMVGPMLGPSIQQFNVIYPLYISITLVIICVLICL-SMAESLPPQNRH-IKLEHSNPLWGLKKAMRYRP-FLLFALPFFLSQLS-ESVYAFIVIYTKQRLGWSYVSVGLYISLLALTIAILQGNL-RHIVPRF 412
            + RA   + I      +   V++  + +L++K    + + AA   G    +  G+QFL    +G LSD  GRRPVL ASL    +  + +   P    ++A  +++G++        A + D+    +         +G +GMA G   ++GP LG  + QF    P  +S  L +   L  L  + ESLPP+ R   +   +NP+  L +     P  L+ A   F+  LS +S+Y+    + + R GW+   VG  ++ + +T AI+QG L R ++PRF
Sbjct:    1 MNRALAFIFITVLIDAIGFGVVIPVFPQLIVKLTGRDLANAAEVSGWIAFLYAGVQFLMGPVIGGLSDRFGRRPVLLASLAAFSLDYVVMAFAPTLWWLVAARVVAGITGATFPTAYAYIADVTPPEKR-----GANFGVIGMAFGFGFIIGPALGGFVAQFGTEVPFLVSAGLAMANFLYGLFVLPESLPPEKRRAFEWRRANPVGALMRLKSAHPVVLMLAATVFVWTLSYQSLYSIWSYHGQLRYGWTPEQVGWSLAAVGVTGAIVQGFLGRKLIPRF 276          
BLAST of EWM30079.1 vs. NCBI_GenBank
Match: gi|636679721|gb|AIA18800.1| (Tetracycline_Resistance_MFS_Efflux_Pump [uncultured bacterium])

HSP 1 Score: 97.8265 bits (242), Expect = 1.271e-18
Identity = 77/272 (28.31%), Postives = 133/272 (48.90%), Query Frame = 0
Query:  154 SLSVLVATWTELLLKGFDNNFSKAAAFLGTCQGVERGIQFLTAASLGNLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILAMLNAIVGDLAAGREELEGGLTQQYGRLGMAIGLAMMVGPMLGPSIQQFNVIYPLYISITLVIICVLI-CLSMAESLPPQN-RHIKLEHSNPLWGLKKAMRYRPFL----LFALPFFLSQLSESVYAFIVIYTKQRLGWSYVSVGLYISLLALTIAILQGNL-RHIVPRFVSGKSL 418
             L +++  + +L+ +    + S+A+ + G        +QFL A  LGNLSD  GRRPVL  SL+   +  L + + P    +    II+G++    +   A + D++   +       Q +G +G A GL  ++GP++G  + QF    P Y++    ++  L     + ESL P+N R    + +NPL  L +  +Y   L      A+ +  S   +S +AF   Y  Q+ GW+   VG  +  + L +A++QG L R ++PR    KS+
Sbjct:   22 GLGIIIPVFPKLIQEMIHGDLSRASEYSGWLTFAYAIMQFLFAPLLGNLSDQYGRRPVLLGSLLGFGVDYLFLALAPSIGWLFLGRIIAGITGASFSTATAYIADISTPEKR-----AQNFGLVGAAFGLGFIIGPVVGGLLGQFGPRIPFYVAAGCSLLNALYGYFILPESLAPENRRRFDWKRANPLGTLLQLKKYPATLGLVSSLAILYIASHAVQSTWAF---YNMQKFGWNSAWVGYSLGFVGLMVALVQGGLIRLVIPRIGQEKSI 285          
BLAST of EWM30079.1 vs. NCBI_GenBank
Match: gi|516842619|ref|WP_018126444.1| (tetracycline resistance MFS efflux pump [Balneola vulgaris])

HSP 1 Score: 97.4413 bits (241), Expect = 2.048e-18
Identity = 70/241 (29.05%), Postives = 120/241 (49.79%), Query Frame = 0
Query:  175 SKAAAFLGTCQGVERGIQFLTAASLGNLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILAMLNAIVGDLAAGREELEGGLTQQYGRLGMAIGLAMMVGPMLGPSIQQFNVIYPLYISITLVIICVLI-CLSMAESLPPQNRH-IKLEHSNPLWGLKKAMRYRPFL----LFALPFFLSQLSESVYAFIVIYTKQRLGWSYVSVGLYISLLALTIAILQGNLRHIV 409
            SKAA + G    V    QFL A  +G LSD  GRRPVL  SL    I  + + +    + +    +ISG++   +   +A + D++A  +       Q +G +G A GL  ++GP++G  + Q+    P + +  L ++ VL     + ESLP + R    ++ +NPL  LK+  ++   +    +FAL +     + S + +   YT Q+  W    VG+ + ++ L +A++QG L  IV
Sbjct:   44 SKAAIYGGWLMFVYASTQFLFAPIIGGLSDRFGRRPVLLFSLFGFGIDYILIGLSTNIVWLFIARLISGITGASITTASAYIADISAPEKR-----AQNFGLIGAAFGLGFIIGPVIGGLLGQYGTRVPFFAAAALTLVNVLYGFFVLPESLPKEERRPFNIKRANPLGSLKQFKQFPGIMGLVGVFALIYLAGHATNSTWTY---YTMQKFEWDEKMVGISLGVVGLCVAVVQGGLTRIV 276          
BLAST of EWM30079.1 vs. NCBI_GenBank
Match: gi|516263275|ref|WP_017667238.1| (tetracycline resistance MFS efflux pump [Sandarakinorhabdus sp. AAP62])

HSP 1 Score: 96.6709 bits (239), Expect = 3.169e-18
Identity = 79/281 (28.11%), Postives = 134/281 (47.69%), Query Frame = 0
Query:  137 IKRAKVSMRIIAFFYHLSLSVLVATWTELLLKGFDNNFSKAAAFLGTCQGVERGIQFLTAASLGNLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILAMLNAIVGDLAAGREELEGGLTQQYGRLGMAIGLAMMVGPMLGPSIQQFNVIYPLYISITLVIICVLICL-SMAESLPPQNRH-IKLEHSNPLWGLKKAMRYRP-FLLFALPFFLSQLS-ESVYAFIVIYTKQRLGWSYVSVGLYISLLALTIAILQGNL-RHIVPRF 412
            + RA   + I      +   V++  + +L++K    + + AA   G    +   +QFL    +G LSD  GRRPVL ASL    +  + +   P    ++A  +++G++        A + D+     E  G     +G +GMA G   ++GP LG  + +F    P  +S  L +   L  L  + ESLPP+ R   +   +NP+  L +     P  L+ A   F+  LS +S+Y+    + + R GW+   VG  ++ + +T AI+QG L R ++PRF
Sbjct:    1 MNRALAFIFITVLIDAIGFGVVIPVFPQLIVKLTGRDLAHAAEVSGWIAFLYASVQFLMGPVIGGLSDRFGRRPVLLASLAAFSLDYVVMAFAPTLWWLVAARVVAGITGATFPTAYAYIADVTP--PEKRG---ANFGVIGMAFGFGFIIGPALGGFVARFGTEVPFLVSAGLAMANFLYGLFVLPESLPPERRRSFEWRRANPVGALMRLKSAHPVVLMLAATVFVWTLSYQSLYSIWSYHGQLRYGWTAEQVGWSLAAVGVTGAIVQGFLGRKLIPRF 276          
BLAST of EWM30079.1 vs. NCBI_GenBank
Match: gi|1150777803|ref|WP_077972082.1| (MFS transporter [Bartonella apis] >gi|1150391715|gb|AQT45282.1| MFS transporter, DHA1 family, tetracycline resistance protein [Bartonella apis])

HSP 1 Score: 96.2857 bits (238), Expect = 5.913e-18
Identity = 79/287 (27.53%), Postives = 140/287 (48.78%), Query Frame = 0
Query:  132 LDRETIKRAKVSMRIIAFFYHLSLSVLVATWTELLLKGFDNNFSKAAAFLGTCQGVERGIQFLTAASLGNLSDCVGRRPVLFASLI-LNIISTLCVIVKPGPMTVLAYFIISGLSNCILAMLNAIVGDLAAGREELEGGLTQQYGRLGMAIGLAMMVGPMLGPSIQQFNVIYPLYISITLVIICVLICLSMA-ESLPPQ-NRHIKLEHSNPLWGLKKAMRYRPFLLFALPFFLSQLSESVY-AFIVIYTKQRLGWSYVSVGLYISLLALTIAILQGNLRHIVPRFVS 414
            LD + + +  V + I      + ++++V    E L +   ++ S+A+   G    V   +QFL A  +GNLSD  GRRP+L  S+I   I + +C I     M  +   I++G+S    +  +A + D++          T+ +G +G+A G+   +GP++G  + +     P Y S  L ++  +  + M  E+LP    R  ++  +NP+  L +   Y   L  AL FFL  L+E+V+ + +   TK+R GWS  S+G    +  +   I+ G L   + R +S
Sbjct:    5 LDAKFVHKGLVLVFITLLLDIIGIAIIVPVMPEYLSQLTGDSISRASVDGGILLMVYSTMQFLFAPFIGNLSDRFGRRPILLLSIITFAIDNFICAIAWSYSMLFIGR-ILAGVSGASFSTCSAYLADISDDDTR-----TRNFGLIGIAFGVGFFLGPLIGGVLGEIGPRMPFYFSAGLSLVNFVFAMYMLPETLPMSLRRPFEIRRANPVGALLELRHYPTVLWVALAFFLYWLAEAVWPSTLAFMTKERYGWSEFSIGFAYGVFGIGQCIIMGLLLPYMTRHLS 285          
BLAST of EWM30079.1 vs. NCBI_GenBank
Match: gi|1059985138|ref|WP_069058137.1| (MFS transporter [Sinorhizobium sp. RAC02] >gi|1059498038|gb|AOF90885.1| sugar (and other) transporter family protein [Sinorhizobium sp. RAC02])

HSP 1 Score: 95.1301 bits (235), Expect = 1.064e-17
Identity = 78/284 (27.46%), Postives = 129/284 (45.42%), Query Frame = 0
Query:  132 LDRETIKRAKVSMRIIAFFYHLSLSVLVATWTELLLKGFDNNFSKAAAFLGTCQGVERGIQFLTAASLGNLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILAMLNAIVGDLAAGREELEGGLTQQYGRLGMAIGLAMMVGPMLGPSIQQFNVIYPLYISITLVII-CVLICLSMAESLPPQN-RHIKLEHSNPLWGLKKAMRYRPFLLFALPFFLSQLSESVYAFIVIYTKQ-RLGWSYVSVGLYISLLALTIAILQGN-LRHIVPR 411
            +D  T +R    + +I F   + +++++      L +   ++ S+AA   G    V  G+QFL A  +GNLSD  GRRPVL A ++   I  L   +      +    +++G+S        A + D++           + +G +G+A G    +GP++G  + +F    P Y +  L  +  V  C  + ESL P N R  +   +NPL  L +   Y   L   L FF   L+ SVY  +  +    R GWS   +GL + +  +  AI+    L  +VPR
Sbjct:    2 IDARTTRRGLFIVFMIMFLDVIGIAIIMPVLPTYLRELTGDSLSEAAIDGGWLLLVYAGMQFLFAPFIGNLSDRFGRRPVLLACILTFAIDNLICALATSYWMLFVGRVLAGISGASFGTAAAYIADVSTDETR-----AKNFGLMGIAFGTGFALGPVIGGLLGEFGPRIPFYGAAALAFLNFVAACFLLPESLEPANRRRFEFSRANPLGALLQMRNYPGVLWIGLVFFCYWLAHSVYPSVWSFVAAFRYGWSEGQIGLSLGVFGIGGAIVMAFVLPRVVPR 280          
The following BLAST results are available for this feature:
BLAST of EWM30079.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112712|gb|EWM30079.1|0.000e+0100.00major facilitator superfamily mfs_1 [Nannochlorops... [more]
gi|585112711|gb|EWM30078.1|0.000e+099.78major facilitator superfamily mfs_1 [Nannochlorops... [more]
gi|553180203|ref|XP_005853362.1|3.897e-9250.52major facilitator superfamily mfs 1, partial [Nann... [more]
gi|1134346291|ref|WP_076585785.1|5.609e-2029.75MFS transporter [Luteimonas tolerans] >gi|11317797... [more]
gi|550931819|ref|WP_022680231.1|2.296e-1928.11tetracycline resistance MFS efflux pump [Sandaraki... [more]
gi|636679721|gb|AIA18800.1|1.271e-1828.31Tetracycline_Resistance_MFS_Efflux_Pump [unculture... [more]
gi|516842619|ref|WP_018126444.1|2.048e-1829.05tetracycline resistance MFS efflux pump [Balneola ... [more]
gi|516263275|ref|WP_017667238.1|3.169e-1828.11tetracycline resistance MFS efflux pump [Sandaraki... [more]
gi|1150777803|ref|WP_077972082.1|5.913e-1827.53MFS transporter [Bartonella apis] >gi|1150391715|g... [more]
gi|1059985138|ref|WP_069058137.1|1.064e-1727.46MFS transporter [Sinorhizobium sp. RAC02] >gi|1059... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna603rna603Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications