EWM24648.1, cds6020 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|585106170|gb|EWM24648.1| (protein kinase domain protein [Nannochloropsis gaditana]) HSP 1 Score: 608.216 bits (1567), Expect = 0.000e+0 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0
Query: 1 MIVAQVLSEQHPMSQCYGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYIYDEIAACYICRRAVTRHTTPFAYLGSFTWRAFVEKTKAQLHNRITSPVMQQHSQCYKEKSNDDALGLI 288
MIVAQVLSEQHPMSQCYGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYIYDEIAACYICRRAVTRHTTPFAYLGSFTWRAFVEKTKAQLHNRITSPVMQQHSQCYKEKSNDDALGLI
Sbjct: 1 MIVAQVLSEQHPMSQCYGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYIYDEIAACYICRRAVTRHTTPFAYLGSFTWRAFVEKTKAQLHNRITSPVMQQHSQCYKEKSNDDALGLI 288
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|553195389|ref|XP_005856136.1| (protein kinase domain protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292925|gb|EKU20226.1| protein kinase domain protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 264.233 bits (674), Expect = 1.540e-86 Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0
Query: 96 HRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYIYDE 223
HRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYI ++
Sbjct: 1 HRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYICEK 128
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|298714843|emb|CBJ25742.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 266.159 bits (679), Expect = 2.504e-86 Identity = 123/206 (59.71%), Postives = 154/206 (74.76%), Query Frame = 0
Query: 15 QCYGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYI 220
Q YG+ASYWD RYT DPE FDWYQRYSGLK + Q++RK D+ILM GCGNS +SEDM++DGFT +TNID+SRVVV QM +R K +++W MN CAL+ PD SFN V+DKGTLDS+LCG GS N A MCME+SRVLK +G++ + SYG+P+NRLQYL+ + YSW V+VHT+PK P+ S A D D SVHY+Y+
Sbjct: 4 QQYGKASYWDDRYTKDPEIFDWYQRYSGLKDWISQYVRKDDNILMVGCGNSRLSEDMFDDGFTTLTNIDVSRVVVEQMIARYRDKPALMWSMMNVCALDYPDESFNAVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFICSYGVPDNRLQYLENDDYSWTVTVHTIPK------PTISAAAVPDTRDAE---SVHYLYV 200
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|1173961422|gb|OQS07454.1| (methyltransferase [Thraustotheca clavata]) HSP 1 Score: 240.736 bits (613), Expect = 2.008e-76 Identity = 107/204 (52.45%), Postives = 148/204 (72.55%), Query Frame = 0
Query: 17 YGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYI 220
YG+ASYWD RYT D EPFDWYQRYSGLK L+ Q+++K+D+ILM+G GNS ++++M DGF I NID+S+VV++QM + + G+ M WQ MN C+L+ D +F+ V+DKGT+DSILCG GS N A MC E+ RVLK +G+F ++SYG+P+NRL YL+ W+V+VHT+PK P+ S D AD + +VHY+Y+
Sbjct: 4 YGKASYWDDRYTKDLEPFDWYQRYSGLKDLMLQYLKKTDNILMSGAGNSRLTDEMMNDGFQTIMNIDVSQVVIDQMSKKYEGREGMQWQQMNVCSLSFSDETFDSVVDKGTMDSILCGEGSTANIAKMCQEIYRVLKPNGVFFIVSYGVPDNRLSYLENNELHWKVTVHTLPK------PTVSAVQVTDAADAN---AVHYIYV 198
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|669159208|ref|XP_008615166.1| (hypothetical protein SDRG_10927 [Saprolegnia diclina VS20] >gi|530733083|gb|EQC31325.1| hypothetical protein SDRG_10927 [Saprolegnia diclina VS20]) HSP 1 Score: 239.965 bits (611), Expect = 4.596e-76 Identity = 108/204 (52.94%), Postives = 145/204 (71.08%), Query Frame = 0
Query: 17 YGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYI 220
YG+ASYWD RYT D E FDWYQRY+GLK L+ Q+++K+D++LM+G GNS ++E+M DGF I NID+S+VVV+QM + + G M WQ MN C+L+ D +F+ V DKGT+DSILCG GS N A MC EV RVLK +G+F ++SYG+P+NRL YL+ W+V+VHTVPK P+ S D AD + +VHY+Y+
Sbjct: 4 YGKASYWDERYTKDAEQFDWYQRYAGLKDLVLQYLKKTDNVLMSGAGNSRLTEEMMNDGFQTIMNIDVSQVVVDQMAKKYEGHEGMQWQQMNVCSLSFSDETFDSVFDKGTMDSILCGEGSTANVAKMCQEVYRVLKPNGVFFIVSYGVPDNRLSYLENNELHWKVTVHTVPK------PTVSAVQVTDAADAN---AVHYIYV 198
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|813118949|ref|XP_012196112.1| (hypothetical protein SPRG_02171 [Saprolegnia parasitica CBS 223.65] >gi|641539555|gb|KDO33364.1| hypothetical protein SPRG_02171 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 239.58 bits (610), Expect = 5.472e-76 Identity = 108/204 (52.94%), Postives = 145/204 (71.08%), Query Frame = 0
Query: 17 YGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYI 220
YG+ASYWD RYT D E FDWYQRY+GLK L+ Q+++K+D++LM+G GNS ++E+M DGF I NID+S+VVV+QM + + G M WQ MN C+L+ D +F+ V DKGT+DSILCG GS N A MC EV RVLK +G+F ++SYG+P+NRL YL+ W+V+VHTVPK P+ S D AD + +VHY+Y+
Sbjct: 4 YGKASYWDERYTKDAEQFDWYQRYAGLKDLVLQYLKKTDNVLMSGAGNSRLTEEMMNDGFQTIMNIDVSQVVVDQMAKKYEGHEGMQWQQMNVCSLSFSDETFDSVFDKGTMDSILCGEGSTANVAKMCQEVYRVLKPNGVFFIVSYGVPDNRLSYLENNELHWKVTVHTVPK------PTVSAVQVTDAADAN---AVHYIYV 198
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|1173944009|gb|OQR92794.1| (methyltransferase [Achlya hypogyna]) HSP 1 Score: 239.58 bits (610), Expect = 5.590e-76 Identity = 108/204 (52.94%), Postives = 146/204 (71.57%), Query Frame = 0
Query: 17 YGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYI 220
YG+ASYWD RYT D E FDWYQRY+GLK L+ Q+++K+D++LM+G GNS ++E+M DGF I NID+S+VVV+QM + + G M WQ MN C+L+ D +F+ V+DKGT+DSILCG GS N A MC EV RVLK +G+F ++SYG+P+NRL YL+ W+V+VHTVPK P+ S D AD + +VHY+Y+
Sbjct: 4 YGKASYWDERYTKDAEQFDWYQRYAGLKDLVLQYLKKTDNVLMSGAGNSRLTEEMMNDGFQTIMNIDVSQVVVDQMAKKYEGHEGMQWQQMNVCSLSFSDETFDSVVDKGTMDSILCGEGSTANVAKMCQEVYRVLKPNGVFFIVSYGVPDNRLSYLENNELHWKVTVHTVPK------PTVSAVQVTDAADAN---AVHYIYV 198
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|676382961|ref|XP_009034759.1| (hypothetical protein AURANDRAFT_5839, partial [Aureococcus anophagefferens] >gi|323454264|gb|EGB10134.1| hypothetical protein AURANDRAFT_5839, partial [Aureococcus anophagefferens]) HSP 1 Score: 238.039 bits (606), Expect = 5.906e-76 Identity = 104/172 (60.47%), Postives = 134/172 (77.91%), Query Frame = 0
Query: 18 GRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPK 189
G+ SYWD RYT DPEPFDWYQRYSG++ + + DSILMAGCGNS +SEDM+EDG+ +++NIDISRV+ +QM E ++ K ++ +Q MN C+L PD SF+ V+ KG +D+ILCG GS N A MCMEVSRVLK +GIF V+SYG+P+NR+QYL+ E YSW V+ HTVPK
Sbjct: 1 GKTSYWDERYTKDPEPFDWYQRYSGIQARRGAGMERDDSILMAGCGNSRLSEDMFEDGYANLSNIDISRVI-DQMSEKYKDKPALSFQQMNVCSLEFPDESFDAVIAKGVMDAILCGEGSTANVAKMCMEVSRVLKPNGIFFVVSYGVPDNRMQYLENEDYSWVVTTHTVPK 171
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|673018070|ref|XP_008862996.1| (hypothetical protein H310_01617 [Aphanomyces invadans] >gi|574482199|gb|ETW09191.1| hypothetical protein H310_01617 [Aphanomyces invadans]) HSP 1 Score: 238.424 bits (607), Expect = 1.737e-75 Identity = 107/204 (52.45%), Postives = 146/204 (71.57%), Query Frame = 0
Query: 17 YGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYI 220
YG+ASYWD RYT D E FDWYQRY+G+K L+ Q+++K+D++LM+G GNS +SE+M DGF I NID+S+VV++QM + + G M WQ MN C+L+ D +F+ V+DKGT+DSILCG GS N A MC E+ RVLK +G+F +ISYG+P+NRL YL+ W+V+VHTVPK P+ S D AD + +VHY+Y+
Sbjct: 4 YGKASYWDERYTKDAEQFDWYQRYAGVKDLMLQYLKKTDNVLMSGAGNSRLSEEMLNDGFQTIMNIDVSQVVIDQMGKKYEGHEGMQWQQMNVCSLSFSDETFDSVVDKGTMDSILCGEGSTANVAKMCQEIYRVLKPNGVFFIISYGVPDNRLSYLENNELHWKVTVHTVPK------PTVSAVQVTDAADAN---AVHYIYV 198
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|698775870|ref|XP_009820979.1| (hypothetical protein H257_00137 [Aphanomyces astaci] >gi|574123104|gb|ETV88579.1| hypothetical protein H257_00137 [Aphanomyces astaci]) HSP 1 Score: 235.728 bits (600), Expect = 1.587e-74 Identity = 106/204 (51.96%), Postives = 145/204 (71.08%), Query Frame = 0
Query: 17 YGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYI 220
YG+ASYWD RYT D E FDWYQRY+G+K L Q+++K+D++LM+G GNS +SE+M DGF I NID+S+VV++QM + + G M WQ MN C+L+ D +F+ V+DKGT+DSILCG GS N A MC E+ RVLK +G++ +ISYG+P+NRL YL+ W+V+VHTVPK P+ S D AD + +VHY+Y+
Sbjct: 4 YGKASYWDERYTKDAEQFDWYQRYAGVKDLALQYLKKTDNVLMSGAGNSRLSEEMLNDGFQTIMNIDVSQVVIDQMSKKYEGHEGMQWQQMNVCSLSFSDETFDSVVDKGTMDSILCGEGSTANVAKMCQEIYRVLKPNGVYFIISYGVPDNRLSYLENNELHWKVTVHTVPK------PTVSAVQVTDAADAN---AVHYIYV 198 The following BLAST results are available for this feature:
BLAST of EWM24648.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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