EWM24648.1, cds6020 (CDS) Nannochloropsis gaditana

Overview
NameEWM24648.1
Unique Namecds6020
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:423124..423209 -
Alignment locationCM002467.1:422479..423053 -
Alignment locationCM002467.1:422322..422400 -
Alignment locationCM002467.1:422154..422280 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24648.1
Productprotein kinase domain protein
Orig transcript idgnl|cribi|Naga_100055g19.7332.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:423124..423209 -
CM002467.1supercontigCM002467.1:422479..423053 -
CM002467.1supercontigCM002467.1:422322..422400 -
CM002467.1supercontigCM002467.1:422154..422280 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR013216Methyltransf_11
Homology
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|585106170|gb|EWM24648.1| (protein kinase domain protein [Nannochloropsis gaditana])

HSP 1 Score: 608.216 bits (1567), Expect = 0.000e+0
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0
Query:    1 MIVAQVLSEQHPMSQCYGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYIYDEIAACYICRRAVTRHTTPFAYLGSFTWRAFVEKTKAQLHNRITSPVMQQHSQCYKEKSNDDALGLI 288
            MIVAQVLSEQHPMSQCYGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYIYDEIAACYICRRAVTRHTTPFAYLGSFTWRAFVEKTKAQLHNRITSPVMQQHSQCYKEKSNDDALGLI
Sbjct:    1 MIVAQVLSEQHPMSQCYGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYIYDEIAACYICRRAVTRHTTPFAYLGSFTWRAFVEKTKAQLHNRITSPVMQQHSQCYKEKSNDDALGLI 288          
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|553195389|ref|XP_005856136.1| (protein kinase domain protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292925|gb|EKU20226.1| protein kinase domain protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 264.233 bits (674), Expect = 1.540e-86
Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0
Query:   96 HRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYIYDE 223
            HRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYI ++
Sbjct:    1 HRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYICEK 128          
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|298714843|emb|CBJ25742.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 266.159 bits (679), Expect = 2.504e-86
Identity = 123/206 (59.71%), Postives = 154/206 (74.76%), Query Frame = 0
Query:   15 QCYGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYI 220
            Q YG+ASYWD RYT DPE FDWYQRYSGLK  + Q++RK D+ILM GCGNS +SEDM++DGFT +TNID+SRVVV QM   +R K +++W  MN CAL+ PD SFN V+DKGTLDS+LCG GS  N A MCME+SRVLK +G++ + SYG+P+NRLQYL+ + YSW V+VHT+PK      P+ S  A  D  D     SVHY+Y+
Sbjct:    4 QQYGKASYWDDRYTKDPEIFDWYQRYSGLKDWISQYVRKDDNILMVGCGNSRLSEDMFDDGFTTLTNIDVSRVVVEQMIARYRDKPALMWSMMNVCALDYPDESFNAVIDKGTLDSVLCGEGSTANVAKMCMEISRVLKPNGVYFICSYGVPDNRLQYLENDDYSWTVTVHTIPK------PTISAAAVPDTRDAE---SVHYLYV 200          
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|1173961422|gb|OQS07454.1| (methyltransferase [Thraustotheca clavata])

HSP 1 Score: 240.736 bits (613), Expect = 2.008e-76
Identity = 107/204 (52.45%), Postives = 148/204 (72.55%), Query Frame = 0
Query:   17 YGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYI 220
            YG+ASYWD RYT D EPFDWYQRYSGLK L+ Q+++K+D+ILM+G GNS ++++M  DGF  I NID+S+VV++QM + + G+  M WQ MN C+L+  D +F+ V+DKGT+DSILCG GS  N A MC E+ RVLK +G+F ++SYG+P+NRL YL+     W+V+VHT+PK      P+ S     D AD +   +VHY+Y+
Sbjct:    4 YGKASYWDDRYTKDLEPFDWYQRYSGLKDLMLQYLKKTDNILMSGAGNSRLTDEMMNDGFQTIMNIDVSQVVIDQMSKKYEGREGMQWQQMNVCSLSFSDETFDSVVDKGTMDSILCGEGSTANIAKMCQEIYRVLKPNGVFFIVSYGVPDNRLSYLENNELHWKVTVHTLPK------PTVSAVQVTDAADAN---AVHYIYV 198          
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|669159208|ref|XP_008615166.1| (hypothetical protein SDRG_10927 [Saprolegnia diclina VS20] >gi|530733083|gb|EQC31325.1| hypothetical protein SDRG_10927 [Saprolegnia diclina VS20])

HSP 1 Score: 239.965 bits (611), Expect = 4.596e-76
Identity = 108/204 (52.94%), Postives = 145/204 (71.08%), Query Frame = 0
Query:   17 YGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYI 220
            YG+ASYWD RYT D E FDWYQRY+GLK L+ Q+++K+D++LM+G GNS ++E+M  DGF  I NID+S+VVV+QM + + G   M WQ MN C+L+  D +F+ V DKGT+DSILCG GS  N A MC EV RVLK +G+F ++SYG+P+NRL YL+     W+V+VHTVPK      P+ S     D AD +   +VHY+Y+
Sbjct:    4 YGKASYWDERYTKDAEQFDWYQRYAGLKDLVLQYLKKTDNVLMSGAGNSRLTEEMMNDGFQTIMNIDVSQVVVDQMAKKYEGHEGMQWQQMNVCSLSFSDETFDSVFDKGTMDSILCGEGSTANVAKMCQEVYRVLKPNGVFFIVSYGVPDNRLSYLENNELHWKVTVHTVPK------PTVSAVQVTDAADAN---AVHYIYV 198          
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|813118949|ref|XP_012196112.1| (hypothetical protein SPRG_02171 [Saprolegnia parasitica CBS 223.65] >gi|641539555|gb|KDO33364.1| hypothetical protein SPRG_02171 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 239.58 bits (610), Expect = 5.472e-76
Identity = 108/204 (52.94%), Postives = 145/204 (71.08%), Query Frame = 0
Query:   17 YGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYI 220
            YG+ASYWD RYT D E FDWYQRY+GLK L+ Q+++K+D++LM+G GNS ++E+M  DGF  I NID+S+VVV+QM + + G   M WQ MN C+L+  D +F+ V DKGT+DSILCG GS  N A MC EV RVLK +G+F ++SYG+P+NRL YL+     W+V+VHTVPK      P+ S     D AD +   +VHY+Y+
Sbjct:    4 YGKASYWDERYTKDAEQFDWYQRYAGLKDLVLQYLKKTDNVLMSGAGNSRLTEEMMNDGFQTIMNIDVSQVVVDQMAKKYEGHEGMQWQQMNVCSLSFSDETFDSVFDKGTMDSILCGEGSTANVAKMCQEVYRVLKPNGVFFIVSYGVPDNRLSYLENNELHWKVTVHTVPK------PTVSAVQVTDAADAN---AVHYIYV 198          
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|1173944009|gb|OQR92794.1| (methyltransferase [Achlya hypogyna])

HSP 1 Score: 239.58 bits (610), Expect = 5.590e-76
Identity = 108/204 (52.94%), Postives = 146/204 (71.57%), Query Frame = 0
Query:   17 YGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYI 220
            YG+ASYWD RYT D E FDWYQRY+GLK L+ Q+++K+D++LM+G GNS ++E+M  DGF  I NID+S+VVV+QM + + G   M WQ MN C+L+  D +F+ V+DKGT+DSILCG GS  N A MC EV RVLK +G+F ++SYG+P+NRL YL+     W+V+VHTVPK      P+ S     D AD +   +VHY+Y+
Sbjct:    4 YGKASYWDERYTKDAEQFDWYQRYAGLKDLVLQYLKKTDNVLMSGAGNSRLTEEMMNDGFQTIMNIDVSQVVVDQMAKKYEGHEGMQWQQMNVCSLSFSDETFDSVVDKGTMDSILCGEGSTANVAKMCQEVYRVLKPNGVFFIVSYGVPDNRLSYLENNELHWKVTVHTVPK------PTVSAVQVTDAADAN---AVHYIYV 198          
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|676382961|ref|XP_009034759.1| (hypothetical protein AURANDRAFT_5839, partial [Aureococcus anophagefferens] >gi|323454264|gb|EGB10134.1| hypothetical protein AURANDRAFT_5839, partial [Aureococcus anophagefferens])

HSP 1 Score: 238.039 bits (606), Expect = 5.906e-76
Identity = 104/172 (60.47%), Postives = 134/172 (77.91%), Query Frame = 0
Query:   18 GRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPK 189
            G+ SYWD RYT DPEPFDWYQRYSG++      + + DSILMAGCGNS +SEDM+EDG+ +++NIDISRV+ +QM E ++ K ++ +Q MN C+L  PD SF+ V+ KG +D+ILCG GS  N A MCMEVSRVLK +GIF V+SYG+P+NR+QYL+ E YSW V+ HTVPK
Sbjct:    1 GKTSYWDERYTKDPEPFDWYQRYSGIQARRGAGMERDDSILMAGCGNSRLSEDMFEDGYANLSNIDISRVI-DQMSEKYKDKPALSFQQMNVCSLEFPDESFDAVIAKGVMDAILCGEGSTANVAKMCMEVSRVLKPNGIFFVVSYGVPDNRMQYLENEDYSWVVTTHTVPK 171          
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|673018070|ref|XP_008862996.1| (hypothetical protein H310_01617 [Aphanomyces invadans] >gi|574482199|gb|ETW09191.1| hypothetical protein H310_01617 [Aphanomyces invadans])

HSP 1 Score: 238.424 bits (607), Expect = 1.737e-75
Identity = 107/204 (52.45%), Postives = 146/204 (71.57%), Query Frame = 0
Query:   17 YGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYI 220
            YG+ASYWD RYT D E FDWYQRY+G+K L+ Q+++K+D++LM+G GNS +SE+M  DGF  I NID+S+VV++QM + + G   M WQ MN C+L+  D +F+ V+DKGT+DSILCG GS  N A MC E+ RVLK +G+F +ISYG+P+NRL YL+     W+V+VHTVPK      P+ S     D AD +   +VHY+Y+
Sbjct:    4 YGKASYWDERYTKDAEQFDWYQRYAGVKDLMLQYLKKTDNVLMSGAGNSRLSEEMLNDGFQTIMNIDVSQVVIDQMGKKYEGHEGMQWQQMNVCSLSFSDETFDSVVDKGTMDSILCGEGSTANVAKMCQEIYRVLKPNGVFFIISYGVPDNRLSYLENNELHWKVTVHTVPK------PTVSAVQVTDAADAN---AVHYIYV 198          
BLAST of EWM24648.1 vs. NCBI_GenBank
Match: gi|698775870|ref|XP_009820979.1| (hypothetical protein H257_00137 [Aphanomyces astaci] >gi|574123104|gb|ETV88579.1| hypothetical protein H257_00137 [Aphanomyces astaci])

HSP 1 Score: 235.728 bits (600), Expect = 1.587e-74
Identity = 106/204 (51.96%), Postives = 145/204 (71.08%), Query Frame = 0
Query:   17 YGRASYWDSRYTTDPEPFDWYQRYSGLKGLLKQHIRKSDSILMAGCGNSSMSEDMYEDGFTHITNIDISRVVVNQMRESHRGKTSMVWQHMNACALNLPDASFNVVLDKGTLDSILCGNGSLNNGAMMCMEVSRVLKADGIFIVISYGIPENRLQYLQEEAYSWRVSVHTVPKAQLDGLPSSSNPADGDLADGSYGGSVHYVYI 220
            YG+ASYWD RYT D E FDWYQRY+G+K L  Q+++K+D++LM+G GNS +SE+M  DGF  I NID+S+VV++QM + + G   M WQ MN C+L+  D +F+ V+DKGT+DSILCG GS  N A MC E+ RVLK +G++ +ISYG+P+NRL YL+     W+V+VHTVPK      P+ S     D AD +   +VHY+Y+
Sbjct:    4 YGKASYWDERYTKDAEQFDWYQRYAGVKDLALQYLKKTDNVLMSGAGNSRLSEEMLNDGFQTIMNIDVSQVVIDQMSKKYEGHEGMQWQQMNVCSLSFSDETFDSVVDKGTMDSILCGEGSTANVAKMCQEIYRVLKPNGVYFIISYGVPDNRLSYLENNELHWKVTVHTVPK------PTVSAVQVTDAADAN---AVHYIYV 198          
The following BLAST results are available for this feature:
BLAST of EWM24648.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106170|gb|EWM24648.1|0.000e+0100.00protein kinase domain protein [Nannochloropsis gad... [more]
gi|553195389|ref|XP_005856136.1|1.540e-8697.66protein kinase domain protein, partial [Nannochlor... [more]
gi|298714843|emb|CBJ25742.1|2.504e-8659.71conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173961422|gb|OQS07454.1|2.008e-7652.45methyltransferase [Thraustotheca clavata][more]
gi|669159208|ref|XP_008615166.1|4.596e-7652.94hypothetical protein SDRG_10927 [Saprolegnia dicli... [more]
gi|813118949|ref|XP_012196112.1|5.472e-7652.94hypothetical protein SPRG_02171 [Saprolegnia paras... [more]
gi|1173944009|gb|OQR92794.1|5.590e-7652.94methyltransferase [Achlya hypogyna][more]
gi|676382961|ref|XP_009034759.1|5.906e-7660.47hypothetical protein AURANDRAFT_5839, partial [Aur... [more]
gi|673018070|ref|XP_008862996.1|1.737e-7552.45hypothetical protein H310_01617 [Aphanomyces invad... [more]
gi|698775870|ref|XP_009820979.1|1.587e-7451.96hypothetical protein H257_00137 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6035rna6035Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications