EWM24636.1, cds6016 (CDS) Nannochloropsis gaditana

Overview
NameEWM24636.1
Unique Namecds6016
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:412268..412441 +
Alignment locationCM002467.1:412520..412586 +
Alignment locationCM002467.1:412786..412950 +
Alignment locationCM002467.1:413019..413851 +
Alignment locationCM002467.1:413966..415458 +
Alignment locationCM002467.1:415554..416307 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24636.1
Productring finger
Orig transcript idgnl|cribi|Naga_100055g23.7320.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:412268..412441 +
CM002467.1supercontigCM002467.1:412520..412586 +
CM002467.1supercontigCM002467.1:412786..412950 +
CM002467.1supercontigCM002467.1:413019..413851 +
CM002467.1supercontigCM002467.1:413966..415458 +
CM002467.1supercontigCM002467.1:415554..416307 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR013083Znf_RING/FYVE/PHD
IPR011989ARM-like
IPR001841Znf_RING
Homology
BLAST of EWM24636.1 vs. NCBI_GenBank
Match: gi|585106158|gb|EWM24636.1| (ring finger [Nannochloropsis gaditana])

HSP 1 Score: 2398.24 bits (6214), Expect = 0.000e+0
Identity = 1161/1161 (100.00%), Postives = 1161/1161 (100.00%), Query Frame = 0
Query:    1 MANRRRSSVSFQLRDVHFAAHLPSNGTHRDSDIGITSSFVRAALPLPLLAFGLGMAAMGGWIWVTPALVFAGLELYRGASGHTRRLSASDRARRASSGANADITGRVRGKTLSLKFCCICLDTIPDDEPCFNLFDCKHDTQTHKVCIDKWLEKHETCPLCRRDAKDPVIGEMKKYPHNVAAQIRGCRFIVFKGWQNAEFHRHLIEIGAAELVANALDIHSSDPSVLAACCAAIFVLAFSDRETQERLSSFGVCQRIVEGMLTFSEDIEVQTRGCGAIYSLSLSNKQIQRQLCLAKAPAAVLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAEVQRGGKGACELLAEVIDRYSQDRDVIYAALDAVMKMAIDNPENRLRFGGVGMCSKVMDAFNQYQDDEVFLLVALTAVYTMAENQRENQTRLLEGNKAEILMSTLWRHEGFMDVVSVGLDVIFALTYDPIEGLNTRSHPALRNAGACGFILKMLQTYPRNPEIYGPGLKAMACFLTSNEMDSSITGPDWCQVVCNSMKQSLELEDVPVLEICCRVLGQLAIHEKDNQALLRRNGACEMICDCLRKGFSKWEALQATADLAYDCQENRHELGQRDCVALLIKCIEKDPEDWVALDIALMALSNLVQDHEQNASCAGAQMIHLSTDKDCTVSFYAFLSHLLESDRLVFGERACIIMMVLSVLCANDPAAQSKIGGVNGCWVVVQRLRISGIGPAGDSMGREDQPLRYPDMSLLRQGVQLMSDLATAHSDNQKRLQQADGLNLLLQVLPDFSSDSSDVVQWLVAVTALLEGNPNNQRHAGNLKMCGHTVKLLKGFSNDTAVVESTLRCLIALATNYRENQEKIGSLGGCDLVRQVVSEFSEDSHLVVRSCSLILALCELQKTDSSGRPLHIWKDNSYNNKHRFRKGGMVPILMQAFINHINRKSESVLFGNLILSLALLAEDDPITSAQLRDNSILNLTIRLVLTYPEEEMLFMAAGGLIASSCVVFNDKWTDWIMFETPLVENQDLFINGNVFPYIIGFITGAPRMKSSVIMSFVSLAALAWQNEKGILLLRDSIGVLTEILSSDVVHEAECMFYGLLVLGSMISLPKPDEKIMDICASLIFELIERAHKLFPDNLCIRKICRLLFSHIQRCGRRARYLTAA 1161
            MANRRRSSVSFQLRDVHFAAHLPSNGTHRDSDIGITSSFVRAALPLPLLAFGLGMAAMGGWIWVTPALVFAGLELYRGASGHTRRLSASDRARRASSGANADITGRVRGKTLSLKFCCICLDTIPDDEPCFNLFDCKHDTQTHKVCIDKWLEKHETCPLCRRDAKDPVIGEMKKYPHNVAAQIRGCRFIVFKGWQNAEFHRHLIEIGAAELVANALDIHSSDPSVLAACCAAIFVLAFSDRETQERLSSFGVCQRIVEGMLTFSEDIEVQTRGCGAIYSLSLSNKQIQRQLCLAKAPAAVLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAEVQRGGKGACELLAEVIDRYSQDRDVIYAALDAVMKMAIDNPENRLRFGGVGMCSKVMDAFNQYQDDEVFLLVALTAVYTMAENQRENQTRLLEGNKAEILMSTLWRHEGFMDVVSVGLDVIFALTYDPIEGLNTRSHPALRNAGACGFILKMLQTYPRNPEIYGPGLKAMACFLTSNEMDSSITGPDWCQVVCNSMKQSLELEDVPVLEICCRVLGQLAIHEKDNQALLRRNGACEMICDCLRKGFSKWEALQATADLAYDCQENRHELGQRDCVALLIKCIEKDPEDWVALDIALMALSNLVQDHEQNASCAGAQMIHLSTDKDCTVSFYAFLSHLLESDRLVFGERACIIMMVLSVLCANDPAAQSKIGGVNGCWVVVQRLRISGIGPAGDSMGREDQPLRYPDMSLLRQGVQLMSDLATAHSDNQKRLQQADGLNLLLQVLPDFSSDSSDVVQWLVAVTALLEGNPNNQRHAGNLKMCGHTVKLLKGFSNDTAVVESTLRCLIALATNYRENQEKIGSLGGCDLVRQVVSEFSEDSHLVVRSCSLILALCELQKTDSSGRPLHIWKDNSYNNKHRFRKGGMVPILMQAFINHINRKSESVLFGNLILSLALLAEDDPITSAQLRDNSILNLTIRLVLTYPEEEMLFMAAGGLIASSCVVFNDKWTDWIMFETPLVENQDLFINGNVFPYIIGFITGAPRMKSSVIMSFVSLAALAWQNEKGILLLRDSIGVLTEILSSDVVHEAECMFYGLLVLGSMISLPKPDEKIMDICASLIFELIERAHKLFPDNLCIRKICRLLFSHIQRCGRRARYLTAA
Sbjct:    1 MANRRRSSVSFQLRDVHFAAHLPSNGTHRDSDIGITSSFVRAALPLPLLAFGLGMAAMGGWIWVTPALVFAGLELYRGASGHTRRLSASDRARRASSGANADITGRVRGKTLSLKFCCICLDTIPDDEPCFNLFDCKHDTQTHKVCIDKWLEKHETCPLCRRDAKDPVIGEMKKYPHNVAAQIRGCRFIVFKGWQNAEFHRHLIEIGAAELVANALDIHSSDPSVLAACCAAIFVLAFSDRETQERLSSFGVCQRIVEGMLTFSEDIEVQTRGCGAIYSLSLSNKQIQRQLCLAKAPAAVLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAEVQRGGKGACELLAEVIDRYSQDRDVIYAALDAVMKMAIDNPENRLRFGGVGMCSKVMDAFNQYQDDEVFLLVALTAVYTMAENQRENQTRLLEGNKAEILMSTLWRHEGFMDVVSVGLDVIFALTYDPIEGLNTRSHPALRNAGACGFILKMLQTYPRNPEIYGPGLKAMACFLTSNEMDSSITGPDWCQVVCNSMKQSLELEDVPVLEICCRVLGQLAIHEKDNQALLRRNGACEMICDCLRKGFSKWEALQATADLAYDCQENRHELGQRDCVALLIKCIEKDPEDWVALDIALMALSNLVQDHEQNASCAGAQMIHLSTDKDCTVSFYAFLSHLLESDRLVFGERACIIMMVLSVLCANDPAAQSKIGGVNGCWVVVQRLRISGIGPAGDSMGREDQPLRYPDMSLLRQGVQLMSDLATAHSDNQKRLQQADGLNLLLQVLPDFSSDSSDVVQWLVAVTALLEGNPNNQRHAGNLKMCGHTVKLLKGFSNDTAVVESTLRCLIALATNYRENQEKIGSLGGCDLVRQVVSEFSEDSHLVVRSCSLILALCELQKTDSSGRPLHIWKDNSYNNKHRFRKGGMVPILMQAFINHINRKSESVLFGNLILSLALLAEDDPITSAQLRDNSILNLTIRLVLTYPEEEMLFMAAGGLIASSCVVFNDKWTDWIMFETPLVENQDLFINGNVFPYIIGFITGAPRMKSSVIMSFVSLAALAWQNEKGILLLRDSIGVLTEILSSDVVHEAECMFYGLLVLGSMISLPKPDEKIMDICASLIFELIERAHKLFPDNLCIRKICRLLFSHIQRCGRRARYLTAA 1161          
BLAST of EWM24636.1 vs. NCBI_GenBank
Match: gi|585112248|gb|EWM29674.1| (conserved unknown protein [Nannochloropsis gaditana])

HSP 1 Score: 122.865 bits (307), Expect = 1.362e-24
Identity = 145/694 (20.89%), Postives = 268/694 (38.62%), Query Frame = 0
Query:  198 EFHRHLI-EIGAAELVANALDIHSSDPSVLAACCAAIFVLAFSDRETQERLSSFGVCQRIVEGMLTFSEDIEVQTRGCGAIYSLSLSNKQIQRQLCLAKAPAAVLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAEVQRGGKGACELLAEVIDRYSQDRDVIYAALDAVMKMAIDNPENRLRFGGVGMCSKVMDAFNQYQDDEVFLLVALTAVYTMAENQRENQTRLLEGNKAEILMSTLWRHEGFMDVVSVGLDVIFALTYDPIEGLNTRSHPALRNAGACGFILKMLQTYPRNPEIYGPGLKAMACFLTSNEMDSSITGPDWCQVVCNSMKQSLELEDVPVLEICCRVLGQLAIHEKDNQALLRRNGACEMICDCLR-----KGFSKWEALQATADLAYDCQENRHELGQRDCVALLIKCIEKDPEDWVALDIALMALSNLVQDHEQNASCAGAQMIHLSTDKDCTVSFYAFLSHLLESDRLVFGERACIIMMVLSVLCANDPAAQSKIGGVNGCWVVVQRLRISGIGPAGDSMGREDQPLRYP-DMSLLRQGVQLMSDLATAHSDNQKRLQQADGLNLLLQVLPDFSSDSSDVVQWLVAVTALLEGNPNNQRHAGNLKMCGHTVKLLKGFSNDTAVVESTLRCLIALATNYRENQEKIGSLGGCDLVRQVVSEFSEDSHLV 884
            E HR    E+GA E+V   +     +PSV A  C AI  +A  D      L+++  CQ +V  M +F      Q +   AI +L  +N++++R L  A A  A++ +++ +     V      AI++L+ D+++ + L             +G+CE +   +     DR V+  A  A++ ++  N   +  FG +G C +V+ A   +  D         A+  +A     N+ R   G    +L                                      A+RN GA             + ++    L A+      +E   S      C+VVC++M+    +  + V    C  +  L  +  +N+  L   GACE++   LR     +G ++ +A  A   L     ENR +LG+      ++  +     D   ++ A+ A+ NL  + E            L ++  C        ++  E+    F  +AC  ++ L+     +   + K+G       VV  L+                   +P D S+  QG+    ++A   ++N           +++  L  F  +S  ++Q L A      GN  N+R  G+L  C   ++ ++ F  +  V      C+  ++ N  EN+ K G + G ++V   +  F  D  ++
Sbjct:  312 EGHRRAFGEVGACEVVVPQMRAFPQEPSVAAEGCWAIRNMAIDD-SLAAILAAYDACQAVVTAMTSFPRHKSTQEQAAAAIVNLGGNNRELKRALASAGATRAIMESMREWPSDPDVLKQCCWAILTLAVDDEIARRLF-----------SEGSCEAVVAAMRACPTDRLVLTKACAAIVNLSGGNQTIKTSFGAMGACDEVIRAMRAFPRDGPLQKQVCWAMKNLAGANDPNRKRFAPGLDGVVL--------------------------------------AVRNFGA-------------DRDVAEQALGALRTLAVDDENARSFGELGACEVVCSAMRAHPSIAGIQVQS--CGSIINLCGNNPENRKRLANMGACELVAAALRNHRTDRGVNE-QACWAVTSLGVSTPENRRKLGEAGVCQCIVATLRTFHADRPVVEQAVSAVRNLAIEEENTR--------KLGSEGACDAIVMVMRAYPGEA---TFQSKACAAVVNLA---GGNSDNKRKLGLGGAVQAVVAALKA------------------FPTDASVTEQGLWATKNMAV-DAENTVLFGNVGICEVIVAALRTFQQESRVLIQALAAAVNCSGGNDENKRRLGSLGACQEIIRSMQSFPTNATVQLQACWCIKNISNNSDENKRKFGPVSG-EMVVAALRAFPTDEGIL 905          

HSP 2 Score: 115.546 bits (288), Expect = 2.493e-22
Identity = 131/537 (24.39%), Postives = 209/537 (38.92%), Query Frame = 0
Query:  163 DAKDPVIGEMKKYPHNVAAQIRGCRFIVFKGWQNAEFHRHLIEIGAAELVANALDIHSSDPSVLAACCAAIFVLAFSDRETQERLSSFGVCQRIVEGMLTFSEDIEVQTRGCGAIYSLSLSNKQI--------------------------QRQLCLAK--------------APA--AVLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAEVQRGGKGACELLAEVIDRYSQDRDVIYAALDAVMKMAIDNPENRLRFGGVGMCSKVMDAFNQYQDDEVFLLVALTAVYTMAENQRENQTRLLEGNKAEILMSTLWRHEGFMDVVSVGLDVIFALTYDPIEGLNTRSHPALRNAGACGFILKMLQTYPRNPEIYGPGLKAMACFLTSNEMDSSITG-PDWCQVVCNSMKQSLELEDVPVLEICCRVLGQLAIHEKDNQALLRRNGACEMICDCLRKGFSK-----WEALQATADLAYDCQENRHELGQRDCVALLIKCIEKDPEDWVALDIALMALSNLVQDHEQN 651
            DA   V+  M  +P + + Q +    IV  G  N E  R L   GA   +  ++    SDP VL  CC AI  LA  D E   RL S G C+ +V  M     D  V T+ C AI +LS  N+ I                          Q+Q+C A               AP    V+ A++ F     VA  A  A+ +L+ D++  +             G  GACE++   +  +     +   +  +++ +  +NPENR R   +G C  V  A   ++ D      A  AV ++  +  EN+ +L E    + +++TL        VV   +  +  L    IE  NTR    L + GAC  I+ +++ YP           A+      N  +    G     Q V  ++K      D  V E        +A+ + +N  L    G CE+I   LR  F +      +AL A  + +    EN+  LG       +I+ ++  P +      A   + N+  + ++N
Sbjct:  365 DACQAVVTAMTSFPRHKSTQEQAAAAIVNLGGNNRELKRALASAGATRAIMESMREWPSDPDVLKQCCWAILTLAVDD-EIARRLFSEGSCEAVVAAMRACPTDRLVLTKACAAIVNLSGGNQTIKTSFGAMGACDEVIRAMRAFPRDGPLQKQVCWAMKNLAGANDPNRKRFAPGLDGVVLAVRNFGADRDVAEQALGALRTLAVDDENARSF-----------GELGACEVVCSAMRAHPSIAGIQVQSCGSIINLCGNNPENRKRLANMGACELVAAALRNHRTDRGVNEQACWAVTSLGVSTPENRRKLGEAGVCQCIVATLRTFHADRPVVEQAVSAVRNLA---IEEENTRK---LGSEGACDAIVMVMRAYPGEATFQSKACAAVVNLAGGNSDNKRKLGLGGAVQAVVAALKAF--PTDASVTEQGLWATKNMAV-DAENTVLFGNVGICEVIVAALRT-FQQESRVLIQALAAAVNCSGGNDENKRRLGSLGACQEIIRSMQSFPTNATVQLQACWCIKNISNNSDEN 879          

HSP 3 Score: 96.6709 bits (239), Expect = 1.376e-16
Identity = 84/350 (24.00%), Postives = 142/350 (40.57%), Query Frame = 0
Query:  168 VIGEMKKYPHNVAAQIRGCRFIVFKGWQNAEFHRHLIEIGAAELVANALDIHSSDPSVLAACCAAIFVLAFSDRETQERLSSFGVCQRIVEGMLTFSEDIEVQTRGCGAIYSLSLSNKQIQRQLCLAKAPAAVLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAE---------------------------------VQRGGKGACELLAEVIDRYSQDRDVIYAALDAVMKMAIDNPENRLRFGGVGMCSKVMDAFNQYQDDEVFLLVALTAVYTMAENQRENQTRL--LEGNKAEILMSTLWRHEGFMDVVSVGLDVIF---ALTYDPIEGLNTRSH 479
            V   M+ +P     Q++ C  I+     N E  + L  +GA ELVA AL  H +D  V    C A+  L  S  E + +L   GVCQ IV  + TF  D  V  +   A+ +L++  +   R+L    A  A++  ++ + G+A+    A  A+++L+  N   +  LG+G   +                                 V  G  G CE++   +  + Q+  V+  AL A +  +  N EN+ R G +G C +++ +   +  +    L A   +  ++ N  EN+ +   + G      +      EG +      L  +    A     IE LN R H
Sbjct:  586 VCSAMRAHPSIAGIQVQSCGSIINLCGNNPENRKRLANMGACELVAAALRNHRTDRGVNEQACWAVTSLGVSTPENRRKLGEAGVCQCIVATLRTFHADRPVVEQAVSAVRNLAIEEENT-RKLGSEGACDAIVMVMRAYPGEATFQSKACAAVVNLAGGNSDNKRKLGLGGAVQAVVAALKAFPTDASVTEQGLWATKNMAVDAENTVLFGNVGICEVIVAALRTFQQESRVLIQALAAAVNCSGGNDENKRRLGSLGACQEIIRSMQSFPTNATVQLQACWCIKNISNNSDENKRKFGPVSGEMVVAALRAFPTDEGILREGKAALRNLSNNNAENRARIESLNYRDH 934          
BLAST of EWM24636.1 vs. NCBI_GenBank
Match: gi|1085177110|gb|OGT65974.1| (hypothetical protein A3J38_10370 [Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_45_9])

HSP 1 Score: 97.0561 bits (240), Expect = 1.450e-16
Identity = 81/394 (20.56%), Postives = 167/394 (42.39%), Query Frame = 0
Query:  239 SDRETQERLSSFGVCQRIVEGMLTFSEDIEVQTRGCGAIYSLSLSNKQIQRQLCLAKAPAAVLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAEVQRGGKGACELLAEVIDRYSQ----DRDVIYAALDAVMKMAIDNPENRLRFGGVGM-------------------------------------------CSKVMDAFNQYQDDEVFLLVALTAVYTMAENQRENQTRLLEGNKAEILMSTLWRHEGFMDVVSVGLDVIFALTYDPIEGLNTRSHPALRNAGACGFILKMLQTYPRNPEIYGPGLKAMACFLTSNEMD-SSITGPDWCQVVCNSMKQSLELEDVPVLEICCRVLGQLAIHEKDNQALLRRNGACEMICDCL 584
            S RE Q+R      C  +   +  +++D+++QT G  AI+ L+L+    Q+Q    +    +  A+QR+  +  + + A  AI  L+ +           +  + Q    G C L+   + ++ Q    DR + + AL A+  +A+++  N+ RF  +G+                                           C +V  A ++Y D+       + A+  +A+    N   +       ++ + L  +     +  VG   IFA+ +   E  NT ++  L  AGAC  + +  + +P +P +    L AM   +  N ++ ++++    C++VC+ M++   + +  V E  C ++ +L+++ + N+  L   GACE + + L
Sbjct:  142 SHRENQDRFGRLVACTSVCGLLRQYADDVQLQTIGLSAIWDLTLNCAHNQQQCIEMQVCELIAAAMQRYPEERMLQLKACGAIWCLAANQ----------QAVKEQFAALGVCALVYAAVTQFCQSPTIDRHIGFQALGAIANLALNHAANQTRFAALGVCEWVIKMLSVSSADVGLQVQGCLTVWSLASHNPTVKSRLGMRACEQVCQALSRYADNRDVQYRGIGALCALAQGHVRNAHFVGACQGGVLICNALAAYPADRGIQEVGFGAIFAVGFS--ETGNTVNNVQLAEAGACQLVCRWAEYHPDDPALQVKALGAMLALVLHNPINHTALSEAGACELVCDIMRKRANMRE--VYESGCGLIWRLSMYSEHNRVRLMAAGACECVYEAL 521          

HSP 2 Score: 79.337 bits (194), Expect = 3.462e-11
Identity = 103/463 (22.25%), Postives = 178/463 (38.44%), Query Frame = 0
Query:   72 GLELYRGASGHTRRLSASDRARRASSGANADITGRVRGKTLSLKFCCICLDTIPDDEPCFNLFDCKHDTQTHKVCIDKWLEKHETCPLCRRDAKDPVIGEMKKYPHNVAAQIRGCRFIVFKGWQNAEFHRHLIEIGAAELVANALDIHSSDPSVLA----ACCAAIFVLAFSDRETQERLSSFGVCQRIVEGMLTFSEDIEVQTRGCGAIYSLSLSNKQIQRQLCLAKAPAAVLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAEVQRGGKGACELLAEVIDRYSQDR---DVIYAALDAVMKMAIDNPENRLRFGGVGMCSKVMDAFNQYQDDEVFLLVALTAVYTMAENQRENQTRLLEGNKAEILMSTLWRHEGFMDVVSVGLDVIFALTYDPIEGLNTRSHPALRNAGACGFILKMLQTYPRNPEIYGPGLKAMACFLTSNEMDSSITG 527
            GLE  R  + H       DR  R    A   + G +R     ++   I L  I D        +C H+ Q    CI+      + C L        +   M++YP     Q++ C  I                +G   LV  A+      P++          AI  LA +    Q R ++ GVC+ +++ +   S D+ +Q +GC  ++SL+  N  ++ +L + +A   V  AL R+     V      A+ +L+  +      +G  +      GG   C  LA     Y  DR   +V + A+ AV      N  N ++    G C  V      + DD    + AL A+  +  +   N T L E    E++   + +     +V   G  +I+ L+       +  +   L  AGAC  + + L  +P +  +   G+ A+  +L+  E+ +   G
Sbjct:  133 GLETIRNLASHREN---QDRFGRLV--ACTSVCGLLRQYADDVQLQTIGLSAIWDLT-----LNCAHNQQQ---CIEM-----QVCEL--------IAAAMQRYPEERMLQLKACGAIWCLAANQQAVKEQFAALGVCALVYAAVTQFCQSPTIDRHIGFQALGAIANLALNHAANQTRFAALGVCEWVIKMLSVSSADVGLQVQGCLTVWSLASHNPTVKSRLGM-RACEQVCQALSRYADNRDVQYRGIGALCALAQGHVRNAHFVGACQ------GGVLICNALAA----YPADRGIQEVGFGAIFAVGFSETGNTVNNVQLAEAGACQLVCRWAEYHPDDPALQVKALGAMLALVLHNPINHTALSEAGACELVCDIMRKRANMREVYESGCGLIWRLSM-----YSEHNRVRLMAAGACECVYEALTAFPHDMGLRPKGVLAV-IYLSHYELAARRWG 552          
BLAST of EWM24636.1 vs. NCBI_GenBank
Match: gi|585110207|gb|EWM27877.1| (ring u-box domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 95.1301 bits (235), Expect = 4.583e-16
Identity = 96/394 (24.37%), Postives = 156/394 (39.59%), Query Frame = 0
Query:  114 LKFCCICLDTIPDDEPCFNLFDCKHDTQTHKVCIDKWLEKHETCPLCRRDA-KDPVIGEMKKYPHNVAAQIRG-----------------------------CRFIV-----FKG---------------WQNAEFHR-HLIEIGAAELVANALDIHSSDPSVLAACCAAIFVLAFSDRETQERLSSFGVCQRIVEGMLTFSEDIEVQTRGCGAIYSLSLSNKQIQRQLCLAKAPAAVLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAEVQRGGKGACELLAEVIDRYSQDRDVIYAALDAVMKMAIDNPENRLRFGGVGMCSKVMDAFNQYQDDEVF------LLVALTAVYTMAENQRENQTRLLEGNKAEILMSTLWRHE 450
            L  C ICL+ I +     +L  C+     H  CI+ WLE++ TCP CR+ A + P +  M + P + + Q +G                             CR +V     F G                  +E  R +  +  A EL     ++H+ D  + AA C A+  LA    E Q RL   G+C R+ E +  + +D  +Q  G  A+ +L   ++   +++  A A A ++  ++ F     V   A  AI SLS    + +  LG  +           C +L  V+  +   RD+      A+ K+A  + ENR R   +     V   FN++  D          +VAL     +A+   E  T +L    A +L S   +H+
Sbjct:   36 LNPCVICLEPIEEGADLTSLLGCEDRHHFHANCINSWLERNATCPTCRKGATRFPFLRRMAESPLDPSVQYQGLLAIVKTASVEGPPQYSIQNVTRLGELGACRLVVTAMQTFSGDRCIQLMGLEAIEALAAKSEGARANFQQESAEELFTRIFEMHTDDKDLQAAACQALVGLATGHPEWQNRLGLAGLCSRVTESLRQWPDDYGIQLSGLYALNALLSRHEANTQRVFEAGAGAILVQMMKTFWRDLDVLDGAITAIYSLSSRGAVERSCLGQLD----------CCRVLLAVMAAHPDARDLQVKCCFAIAKLAWQHAENRHRLVALKAALVVTQIFNKHPFDVAIHVAGSAAMVALYMPLALAQRLAEKATTILLNKTAFLLTSPSAQHK 419          

HSP 2 Score: 72.4034 bits (176), Expect = 3.942e-9
Identity = 47/171 (27.49%), Postives = 81/171 (47.37%), Query Frame = 0
Query:  300 VLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAEVQRGGKGACELLAEVIDRYSQDRDVIYAALDAVMKMAIDNPENRLRFGGVGMCSKVMDAFNQYQDDEVFLLVALTAVYTMAENQRENQTRLLEGNKAEIL---MSTLWRHEGFMDVVSVGLDVIFALT 467
            V+ A+Q F G   + +   +AI +L+  +          EGA      + A EL   + + ++ D+D+  AA  A++ +A  +PE + R G  G+CS+V ++  Q+ DD    L  L A+  +      N  R+ E     IL   M T WR    +DV+   +  I++L+
Sbjct:  141 VVTAMQTFSGDRCIQLMGLEAIEALAAKS----------EGARANFQQESAEELFTRIFEMHTDDKDLQAAACQALVGLATGHPEWQNRLGLAGLCSRVTESLRQWPDDYGIQLSGLYALNALLSRHEANTQRVFEAGAGAILVQMMKTFWRD---LDVLDGAITAIYSLS 298          
BLAST of EWM24636.1 vs. NCBI_GenBank
Match: gi|299116170|emb|CBN76076.1| (Aardvark [Ectocarpus siliculosus])

HSP 1 Score: 90.1225 bits (222), Expect = 1.781e-14
Identity = 70/239 (29.29%), Postives = 116/239 (48.54%), Query Frame = 0
Query:  172 MKKYPHNVAAQIRGCRFIV--FKGWQNAEFHRHLIEIGAAELVANALDIHSSDPSVLAACCAAIFVLAFSDRETQERLSSFGVCQRIVEGMLTFSEDIEVQTRGCGAIYSLSLSNKQIQRQLCLAKAPAAVLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAEVQRGGKGACELLAEVIDRYSQDRDVIYAALDAVMKMAIDNPENRLRFGGVGMCSKVMDAFNQYQDD 408
            ++++P++ + Q +GCR +   F G +N    R L +  A ELV  AL     D  V    C A+  LA + +  + +L   G C  +V+ M TFS++I+VQ   C A+ +L+  +++ +R+L  A A + V  AL  F G   V      A+ +L+  N   Q+   +GE         G C L+A  ++ +  DR++ +    AV  +AI+N  N  R    G    V  A + + DD
Sbjct:  114 LERFPNDASIQTQGCRAVTNLFSGEENI---RKLGQGRACELVTEALRSFPMDHDVQIEACGAVANLANNSKSNRIKLGRAGACSLVVKSMTTFSDNIDVQHASCVAVGNLANRHEENKRRLGAAGACSKVCAALASFQGDLGVQYMGCGAVGNLANSN--AQNCTRLGE--------AGGCLLVAGAMNAFPSDRNLQHVGCAAVANLAINNDPNASRLVKAGGRVAVERALDIFSDD 339          

HSP 2 Score: 81.2629 bits (199), Expect = 9.004e-12
Identity = 83/334 (24.85%), Postives = 143/334 (42.81%), Query Frame = 0
Query:  203 LIEIGAAELVANALDIHSSDPSVLAACCAAIFVLAFSDRETQERLSSFGVCQRIVEGMLTFSEDIEVQTRGCGAIYSLSLSNKQIQRQLCLAKAPAAVLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAEVQRGGKGACELLAEVIDRYSQDRDVIYAALDAVMKMAIDNPENRLRFGGVGMCSKVMDAFNQYQDDEVFLLVALTAVYTMAENQRENQTRLLEGNKAEILMSTLWRHEGFMDVVSVGLDVI--FALTYDPIEGLNTRSHPALRNAGACGFILKMLQTYPRNPEIYGPGLKAMACFLTSNEMDSS-----ITGPD 529
            L E  A   VA  + +      V    C A+  LA    E  + L     C  + + +  F  D  +QT+GC A+ +L  S ++  R+L   +A   V  AL+ F     V + A  A+ +L+ ++K  +          ++ G  GAC L+ + +  +S + DV +A+  AV  +A  + EN+ R G  G CSKV  A   +Q D     +   AV  +A +  +N TRL E     ++   +       ++  VG   +   A+  DP       +   L  AG    + + L  +  + EI   G +A+    + N + ++     +TGP+
Sbjct:   57 LGEADACNAVATVMSMFPEHRQVQVEACRAVEALADGTEENVQLLGEANCCHLVEKALERFPNDASIQTQGCRAVTNL-FSGEENIRKLGQGRACELVTEALRSFPMDHDVQIEACGAVANLANNSKSNR----------IKLGRAGACSLVVKSMTTFSDNIDVQHASCVAVGNLANRHEENKRRLGAAGACSKVCAALASFQGDLGVQYMGCGAVGNLANSNAQNCTRLGEAGGCLLVAGAMNAFPSDRNLQHVGCAAVANLAINNDP-------NASRLVKAGGRVAVERALDIFSDDAEIQTRGEQALEWLSSKNRVGTTLSMKKLTGPE 372          
BLAST of EWM24636.1 vs. NCBI_GenBank
Match: gi|686632577|ref|XP_009308734.1| (hypothetical protein DQ04_01251090 [Trypanosoma grayi] >gi|657143296|gb|KEG13036.1| hypothetical protein DQ04_01251090 [Trypanosoma grayi])

HSP 1 Score: 75.8702 bits (185), Expect = 3.546e-10
Identity = 87/431 (20.19%), Postives = 182/431 (42.23%), Query Frame = 0
Query:  182 QIRGCRFIVFKGWQNAEFHRHLIEIGAAELVANALDIHSSDPSVLAACCAAIFVLAFSDRETQERLSSFGVCQRIVEGMLTFSEDIEVQTRGCGAIYSLSLSNKQIQRQLCLAKAPAAVLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAEVQRGGKGACELLAEVIDRYSQDRDVIYAALDAVMKMAIDNPENRLRFGGVGMCSKVMDAFNQYQDDEVFLLVALTAVYTMAENQRENQTRLLEGNKAEILMSTLWRHEGFMDVVSVGLDV---IFALTYDPIEGLNTRSHPALRNAGACGFILKMLQTYPRNPEIYGPGLKAMACFLTSNEMDSSITGPDWCQVVCNSMKQSLELEDVPVLE-ICCRVLGQLAIHEKDNQALLRRNGACEMICDCLRKGFSKWEAL-QATADLAYDCQEN 607
            Q  GC  I    W N++    ++ +G  E++ NAL  H + P ++   C A+  +AF+    +E +S+ GV   I++GM        VQ  GC A+  LS +N+    Q+      + +++A++  +    V   A+ A+ +           +G     E+      A E +   + R+ Q  +V   A  A++ +++ +P  + +   +     V+ A   ++ ++V    A  A+  +A    +    + E    E L+  +   + +++   V L+    + AL +D     NT +   + + G    +++ ++ + R   +   G   +     + E+   +        +   +K      + P+L+   CR + Q A + ++N+ LL  +GA  +I + +R   +  + L      L Y C EN
Sbjct:  436 QENGCLAIGTMCW-NSDLKTDVVRLGGVEMIMNALREHYTSPGLVKNACRALAQVAFNCDAYREEMSASGVIPLIIKGMAQHPNYDRVQMHGCVALSYLSWNNEANSAQITSNNGYSVIVDAMRNHVHNYEVQEHASRALAN-----------IGTVPSEEL----TPALEQIVAAMRRHDQVSEVQEEACRAIVTLSLVSPTYKDKLYELNCVECVVAAMRNFRSNQVVQQEACNALAHLAYEHAKLNKAVTELKGVEALLLAM---KTYVNAPKVQLNACGGLSALAFD-----NTVAQQQIYDLGGVACVIRAMENFER-LRMLELGCSVLGTLAWNAEIKEKVA----VVAIPEILKAMRVHHNSPLLQKSTCRAISQFAFNSENNRQLLSESGAIPLIVNAMRTHITTDKLLVHGIKALTYLCWEN 837          
BLAST of EWM24636.1 vs. NCBI_GenBank
Match: gi|528219035|gb|EPY21295.1| (hypothetical protein STCU_08609, partial [Strigomonas culicis])

HSP 1 Score: 73.1738 bits (178), Expect = 2.803e-9
Identity = 86/427 (20.14%), Postives = 172/427 (40.28%), Query Frame = 0
Query:  182 QIRGCRFIVFKGWQNAEFHRHLIEIGAAELVANALDIHSSDPSVLAACCAAIFVLAFSDRETQERLSSFGVCQRIVEGMLTFSEDIEVQTRGCGAIYSLSLSNKQIQRQLCLAKAPAAVLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAEVQRGGKGACELLAEVIDRYSQDRDVIYAALDAVMKMAIDNPENRLRFGGVGMCSKVMDAFNQYQDDEVFLLVALTAVYTMAENQRENQTRLLEGNKAEILMSTLWRHEGFMDVVSVGLDVIFALTYDPIEGLNTRSHPALRNAGACGFILKMLQTYPRNPEIYGPGLKAMACFLTSNEMDSSITGPDWCQVVCNSMKQSLELEDVPVLEICCRVLGQLAIHEKDNQALLRRNGACEMICDCLRKGFSKWE-ALQATADLAYDCQEN 607
            Q  GC  I    W N++    ++ +G  +++  ALD H + P ++   C A+  +AF+    ++ +S+ GV   I+ GM         Q  GC A+  LS +N+    Q+   +   AV+ A++   G   V   A  A+ ++S  N                     A E +   + R+ +  +V   A  A++ +++ +P N+ R   +     V+ A   + D ++    A  A+  +A         + E +   +L+  + RH     V       + AL +D     N  +   +   G    +++ ++   R   +   G   +     + ++   +   D    + ++M+  +  +   + +  CR + Q A + ++N+ LL  +GA  +I   +R      +  L A   L Y C EN
Sbjct:  436 QENGCLAIGTMCW-NSDLKADVVRLGGVKVIMKALDEHYTSPGLMKNACRALAQVAFNCERYRDEMSASGVIPLIIRGMEQHPNYDRAQMHGCVALSYLSWTNEGNAAQITANRGYKAVVEAMRCHPGNYEVQEHACRALANISNVNL---------------EDSAAALEQIVAAMRRHEKVSEVQEEACRAMVTLSLVSPANKDRLYDLKGADTVVAALKNFPDIQLVQQEACNALAHLAYEHANLNRAVTELHGVSLLLDAMRRHPHSPKVQLNACGGLSALAFD-----NPTAQQQIFELGGVKCVIRAMEGSDR-LRMLELGCSVLGTLAWNTDIKERV-AVDAVPEILSAMR--INEKSALLQKSTCRAISQFAFNSENNRQLLADSGAIPLIVHAMRTHLGADKLILHALKALTYLCWEN 837          
BLAST of EWM24636.1 vs. NCBI_GenBank
Match: gi|72390095|ref|XP_845342.1| (hypothetical protein [Trypanosoma brucei brucei TREU927] >gi|788005708|ref|XP_011774006.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] >gi|62360440|gb|AAX80854.1| hypothetical protein, conserved [Trypanosoma brucei] >gi|70801877|gb|AAZ11783.1| hypothetical protein, conserved [Trypanosoma brucei brucei TREU927] >gi|261328743|emb|CBH11721.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] >gi|1115875372|emb|SCU66657.1| hypothetical protein, conserved [Trypanosoma equiperdum])

HSP 1 Score: 72.7886 bits (177), Expect = 3.954e-9
Identity = 88/431 (20.42%), Postives = 180/431 (41.76%), Query Frame = 0
Query:  182 QIRGCRFIVFKGWQNAEFHRHLIEIGAAELVANALDIHSSDPSVLAACCAAIFVLAFSDRETQERLSSFGVCQRIVEGMLTFSEDIEVQTRGCGAIYSLSLSNKQIQRQLCLAKAPAAVLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAEVQRGGKGACELLAEVIDRYSQDRDVIYAALDAVMKMAIDNPENRLRFGGVGMCSKVMDAFNQYQDDEVFLLVALTAVYTMAENQRENQTRLLEGNKAEILMSTLWRHEGFMDVVSVGLDV---IFALTYDPIEGLNTRSHPALRNAGACGFILKMLQTYPRNPEIYGPGLKAMACFLTSNEMDSSITGPDWCQVVCNSMKQSLELEDVPVLE-ICCRVLGQLAIHEKDNQALLRRNGACEMICDCLRKGFSKWEAL-QATADLAYDCQEN 607
            Q  GC  +    W N++    +I  G  +++  AL  H ++  ++   C A+  +AF+    ++ + + GV   I++GM        VQ  GC A+  LS +N+Q   Q+      A ++NA++     A V   A+ A+ ++     +  D L              A EL+   + R+    +V      A++ +++ +   + +   +G    V+ A + +   +V    A  A+  +A         + E +  E+L+  +   + +++V  + L+    + AL +D     NT +   + + G    I++ ++ + R   +   G   +     ++E+  S+        +   +K      D P+L+   CR + Q A + + N+ LL  +GA  +I   +R   +  + L      L Y C EN
Sbjct:  436 QDNGCLALGTMCW-NSDLKADVIRYGGVQMIMRALAAHYTNAGLVKNACRALAQVAFNCEAYRDDMHASGVIPLIMKGMAEHPNYDRVQMHGCVALSYLSWNNEQNSAQIISNNGYAVIINAMRNHAHNAEVQEHASRALANI---GGVRSDEL------------TPALELIIGAMRRHEHVSEVQEETCRAIVTLSLISTSYKDKLFELGAAECVVTAMHNFPSTQVVQQEACNALAHLAYEHANLNRAVTELSGVEVLLRAM---KTYVNVPKIQLNACGGLSALAFD-----NTIAQKQIYDLGGVACIIRAMENFER-LRMLELGCSVLGTLAWNSEIKESVA----VVAIPEILKAMRVHHDSPLLQKSTCRAISQFAFNSESNRKLLAESGAIPLIVLAMRTHVTTDKLLVHGIKALTYLCWEN 837          
BLAST of EWM24636.1 vs. NCBI_GenBank
Match: gi|528243736|gb|EPY31792.1| (hypothetical protein STCU_03233, partial [Strigomonas culicis])

HSP 1 Score: 72.4034 bits (176), Expect = 4.356e-9
Identity = 86/427 (20.14%), Postives = 172/427 (40.28%), Query Frame = 0
Query:  182 QIRGCRFIVFKGWQNAEFHRHLIEIGAAELVANALDIHSSDPSVLAACCAAIFVLAFSDRETQERLSSFGVCQRIVEGMLTFSEDIEVQTRGCGAIYSLSLSNKQIQRQLCLAKAPAAVLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAEVQRGGKGACELLAEVIDRYSQDRDVIYAALDAVMKMAIDNPENRLRFGGVGMCSKVMDAFNQYQDDEVFLLVALTAVYTMAENQRENQTRLLEGNKAEILMSTLWRHEGFMDVVSVGLDVIFALTYDPIEGLNTRSHPALRNAGACGFILKMLQTYPRNPEIYGPGLKAMACFLTSNEMDSSITGPDWCQVVCNSMKQSLELEDVPVLEICCRVLGQLAIHEKDNQALLRRNGACEMICDCLRKGFSKWE-ALQATADLAYDCQEN 607
            Q  GC  I    W N++    ++ +G  +++  ALD H + P ++   C A+  +AF+    ++ +S+ GV   I+ GM         Q  GC A+  LS +N+    Q+   +   AV+ A++   G   V   A  A+ ++S  N                     A E +   + R+ +  +V   A  A++ +++ +P N+ R   +     V+ A   + D ++    A  A+  +A         + E +   +L+  + RH     V       + AL +D     N  +   +   G    +++ ++   R   +   G   +     + ++   +   D    + ++M+  +  +   + +  CR + Q A + ++N+ LL  +GA  +I   +R      +  L A   L Y C EN
Sbjct:  324 QENGCLAIGTMCW-NSDLKADVVRLGGVKVIMKALDEHYTSPGLMKNACRALAQVAFNCERYRDEMSASGVIPLIIRGMEQHPNYDRAQMHGCVALSYLSWTNEGNAAQITANRGYKAVVEAMRCHPGNYEVQEHACRALANISNVN---------------LEDSAAALEQIVAAMRRHEKVSEVQEEACRAMVTLSLVSPANKDRLYDLKGADTVVAALKNFPDIQLVQQEACNALAHLAYEHANLNRAVTELHGVSLLLDAMRRHPHSPKVQLNACGGLSALAFD-----NPTAQQQIFELGGVKCVIRAMEGSDR-LRMLELGCSVLGTLAWNTDIKERV-AVDAVPEILSAMR--INEKSALLQKSTCRAISQFAFNSENNRQLLADSGAIPLIVHAMRTHLGADKLILHALKALTYLCWEN 725          
BLAST of EWM24636.1 vs. NCBI_GenBank
Match: gi|551647522|ref|XP_005826545.1| (hypothetical protein GUITHDRAFT_76247 [Guillardia theta CCMP2712] >gi|428170642|gb|EKX39565.1| hypothetical protein GUITHDRAFT_76247 [Guillardia theta CCMP2712])

HSP 1 Score: 69.3218 bits (168), Expect = 4.425e-9
Identity = 57/250 (22.80%), Postives = 108/250 (43.20%), Query Frame = 0
Query:  166 DPVIGEMKKYPHNVAAQIRGCRFIVFKGWQNAEFHRHLIE---------IGAAELVANALDIHSSDPSVLAACCAAIFVLAFSDRETQERLSSFGVCQRIVEGMLTFSEDIEVQTRGCGAIYSLSLSNKQIQRQLCLAKAPAAVLNALQRFMGQASVAMSAADAIMSLSCDNKLGQDLLGIGEGAEVQRGGKGACELLAEVIDRYSQDRDVIYAALDAVMKMAIDNPENRLRFGGVGMCSKVMDAFNQYQ 406
            + V+  M+K+  +   Q   CR +      N  F++ ++           G  E V  A+  H  D  V  + C A+  +   D+E + R  + G  + +V+GM    E+ EVQ   CGA+ S++  N++ Q +   A    AV+ A+++    A+V  +A  ++  L+  NK  +          V+    G  E +   + ++ ++  +  AA  A++ M+ +N   R R   +        AF  +Q
Sbjct:   19 EAVVRAMEKHAAHAGVQEAACRAL-----GNMTFYKEILAEANQIRAAAAGGIEGVVRAMVRHRRDLKVQKSTCRALRSMTSGDKENRVRAGAAGGIEAVVKGMKKHGENPEVQEAACGALGSMTAGNRKTQERANKAGGVEAVVRAMEKHGNHAAVQEAACKSLHRLTAGNKENK----------VKADAAGGVEAVVRAMQQHGENAGLQEAACRALISMSNNNAGIRQRVASLDGMDMARRAFEVHQ 253          
The following BLAST results are available for this feature:
BLAST of EWM24636.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106158|gb|EWM24636.1|0.000e+0100.00ring finger [Nannochloropsis gaditana][more]
gi|585112248|gb|EWM29674.1|1.362e-2420.89conserved unknown protein [Nannochloropsis gaditan... [more]
gi|1085177110|gb|OGT65974.1|1.450e-1620.56hypothetical protein A3J38_10370 [Gammaproteobacte... [more]
gi|585110207|gb|EWM27877.1|4.583e-1624.37ring u-box domain-containing protein [Nannochlorop... [more]
gi|299116170|emb|CBN76076.1|1.781e-1429.29Aardvark [Ectocarpus siliculosus][more]
gi|686632577|ref|XP_009308734.1|3.546e-1020.19hypothetical protein DQ04_01251090 [Trypanosoma gr... [more]
gi|528219035|gb|EPY21295.1|2.803e-920.14hypothetical protein STCU_08609, partial [Strigomo... [more]
gi|72390095|ref|XP_845342.1|3.954e-920.42hypothetical protein [Trypanosoma brucei brucei TR... [more]
gi|528243736|gb|EPY31792.1|4.356e-920.14hypothetical protein STCU_03233, partial [Strigomo... [more]
gi|551647522|ref|XP_005826545.1|4.425e-922.80hypothetical protein GUITHDRAFT_76247 [Guillardia ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6031rna6031Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications