EWM24687.1, cds5986 (CDS) Nannochloropsis gaditana

Overview
NameEWM24687.1
Unique Namecds5986
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:322930..324921 +

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Properties
Property NameValue
Protein idEWM24687.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100839g1.439.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:322930..324921 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM24687.1 vs. NCBI_GenBank
Match: gi|585106212|gb|EWM24687.1| (hypothetical protein Naga_100839g1 [Nannochloropsis gaditana])

HSP 1 Score: 1292.33 bits (3343), Expect = 0.000e+0
Identity = 663/663 (100.00%), Postives = 663/663 (100.00%), Query Frame = 0 
Query:    1 MLASPPSKLGSGASTRSIRSTEGPLNSGVRALTLPQEWELDRIRRLMYEQECLQLKNALALKSEELDEARQEKTRITKSFWEGRNRAVSLLQGLSVEVQQEKLRRRLGSGRNASTVSEAGCSLSGEGVASVAARVSGRGESTEGKGRLSPSAASLSLASSASTMGAVAGGLDSASVSSLTSGSWGGEDMDMQALAALQELLSGWSPADPLAPSAARVALEKGDGERGKAGAKAQDVLKDQASRGEDLGSRLEGRRLCFSCGEEGNAPLPSETSASPPSLQCSSSSSVDTAPLSESVIEVAGLPAMVPGEGESKGGTKHAGPKEGEGEGREGAKEGGKEGVDVDLDVFKLKRQACKLRDELAKRRFAELAVSVRLSETEEEVGRLRMKVEEKEALVESLLGEVEEKNGRLLECMRRVQAFEVRLDAVVQERDEMLKRPAKGDGPGGEGNGWEGAGGNEGAGGMEGGAEEGGTSVSGRKPGYVPPTETETSAGRVLEEGMPPVWPVEGEEEVSMGWGVAVDDAEGVQREEEGGQGHAEGEEGKQALVDDLLSLLVRGRALNGRGEEVIFETVRPRAFLIALALALLGILLSLSVFNSFVRYGTDRAGAAPHLTSSPPPTSGTPSAPLSASPTFYTDAWTQSPLSRLTPGGPPFGRGKSSPPAGST 663
            MLASPPSKLGSGASTRSIRSTEGPLNSGVRALTLPQEWELDRIRRLMYEQECLQLKNALALKSEELDEARQEKTRITKSFWEGRNRAVSLLQGLSVEVQQEKLRRRLGSGRNASTVSEAGCSLSGEGVASVAARVSGRGESTEGKGRLSPSAASLSLASSASTMGAVAGGLDSASVSSLTSGSWGGEDMDMQALAALQELLSGWSPADPLAPSAARVALEKGDGERGKAGAKAQDVLKDQASRGEDLGSRLEGRRLCFSCGEEGNAPLPSETSASPPSLQCSSSSSVDTAPLSESVIEVAGLPAMVPGEGESKGGTKHAGPKEGEGEGREGAKEGGKEGVDVDLDVFKLKRQACKLRDELAKRRFAELAVSVRLSETEEEVGRLRMKVEEKEALVESLLGEVEEKNGRLLECMRRVQAFEVRLDAVVQERDEMLKRPAKGDGPGGEGNGWEGAGGNEGAGGMEGGAEEGGTSVSGRKPGYVPPTETETSAGRVLEEGMPPVWPVEGEEEVSMGWGVAVDDAEGVQREEEGGQGHAEGEEGKQALVDDLLSLLVRGRALNGRGEEVIFETVRPRAFLIALALALLGILLSLSVFNSFVRYGTDRAGAAPHLTSSPPPTSGTPSAPLSASPTFYTDAWTQSPLSRLTPGGPPFGRGKSSPPAGST
Sbjct:    1 MLASPPSKLGSGASTRSIRSTEGPLNSGVRALTLPQEWELDRIRRLMYEQECLQLKNALALKSEELDEARQEKTRITKSFWEGRNRAVSLLQGLSVEVQQEKLRRRLGSGRNASTVSEAGCSLSGEGVASVAARVSGRGESTEGKGRLSPSAASLSLASSASTMGAVAGGLDSASVSSLTSGSWGGEDMDMQALAALQELLSGWSPADPLAPSAARVALEKGDGERGKAGAKAQDVLKDQASRGEDLGSRLEGRRLCFSCGEEGNAPLPSETSASPPSLQCSSSSSVDTAPLSESVIEVAGLPAMVPGEGESKGGTKHAGPKEGEGEGREGAKEGGKEGVDVDLDVFKLKRQACKLRDELAKRRFAELAVSVRLSETEEEVGRLRMKVEEKEALVESLLGEVEEKNGRLLECMRRVQAFEVRLDAVVQERDEMLKRPAKGDGPGGEGNGWEGAGGNEGAGGMEGGAEEGGTSVSGRKPGYVPPTETETSAGRVLEEGMPPVWPVEGEEEVSMGWGVAVDDAEGVQREEEGGQGHAEGEEGKQALVDDLLSLLVRGRALNGRGEEVIFETVRPRAFLIALALALLGILLSLSVFNSFVRYGTDRAGAAPHLTSSPPPTSGTPSAPLSASPTFYTDAWTQSPLSRLTPGGPPFGRGKSSPPAGST 663
The following BLAST results are available for this feature:
BLAST of EWM24687.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106212|gb|EWM24687.1|0.000e+0100.00hypothetical protein Naga_100839g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6001rna6001Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications