EWM24703.1, cds5964 (CDS) Nannochloropsis gaditana

Overview
NameEWM24703.1
Unique Namecds5964
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:274330..277713 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24703.1
Productincenp protein
Orig transcript idgnl|cribi|Naga_100076g20.8811.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:274330..277713 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
GO:0016043cellular component organization
Vocabulary: INTERPRO
TermDefinition
IPR005635Inner_centromere_prot_ARK-bd
IPR003034SAP_dom
Homology
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BLAST of EWM24703.1 vs. NCBI_GenBank
Match: gi|585106231|gb|EWM24703.1| (incenp protein [Nannochloropsis gaditana])

HSP 1 Score: 2248.78 bits (5826), Expect = 0.000e+0
Identity = 1127/1127 (100.00%), Postives = 1127/1127 (100.00%), Query Frame = 0 
Query:    1 MTTRSSRSSNSGVKNDQSSGNNIQRTASKGGPTIQRVVDMLFDTSRAAKEQLEAEHKEHLGWLANALNHLRTRVLAGEMDEAAVEGKMNTSDQISEASGAEQHVRQSKRKKEYACRPRTSKGLLDASTDEEDDNFSMASTVVADEGSQVGCASRRGKRRHAAAMKDDHEDGIEHEEGSDSCADQIESGDKSKLAQTLVPSKLRVVDLRRELRARGLPSSGLKAQLVEKLEAALEMEDLEGEKEPELPEILEGDEEENDDEVQEGAEQVQRAAKVAKHSASTSSASSYSSAIAPSEEAAPPVPSSRRMSRSSKAKNSGGAAKKLQSRPSSSDSNCRRSSRGMKSAASAMGVETQTHDAGAHEPELPAVDEGASAESFSIGEDVTPGSQAPVAVSPQEGAVLANDPACTNNGGASRHTGDSRAETAVVEAVAEQVSSAREILAPTPAPVVTSAGKEKLDSVSRSLPTPVPSSSSTASSVNSLLQSSAGSSTSGAGSGSGHALAKAPSSAKDIAAKISALRRGQLEEKSRANKGGGASASSRSANAAASSTAQANAATLTQPLSFLERLKLTTASFASGNASSHSNANSSNSSKAPAAAPKPAPVEAVSLVSDADTSVPPLKAASTTPLPATAAPPPPSGSNPPDPADDSPTGSVSAARLESSTGHASHLGKGAAEETPVSGMDQRNTERAGAEASHQSDTIAAKTMPVVKNARPPSNSHASPQINAAPGAPASGKGSKPAPSNLVGGLHSFTSLLKKGPAEGGSSSASSTAPASGGMRVVEVKALKRAEAARKADMVKEEERRQRKLLMERAIQQKKADATRLEQEAHKKRAELAAKRKEREEKLGAGGGGMPTANAAAVSAASAISGIGKAGPQAGNEEHKKPRIEGLGGAPARDGLPSATAPLSSVPRPPNTVPNLSNSRPGAPIDRLKSPMPAPKQANGGSCNAGSALKDISNKQASNASVPGASAAAAGGGSKGEYASKPGMSTSASQPHANATFGSLAGKLGVGESYEISDREESSDDDYDSDGGGGGKGKAAAKRVPDWAKGPALREALEAQFNKKHKVDPDSIFPEVRTCDLEEIFKSYQQGGAQAKKRAYRQRQSTGNWQRDELSSAEKTRYREDMGYGHS 1127
            MTTRSSRSSNSGVKNDQSSGNNIQRTASKGGPTIQRVVDMLFDTSRAAKEQLEAEHKEHLGWLANALNHLRTRVLAGEMDEAAVEGKMNTSDQISEASGAEQHVRQSKRKKEYACRPRTSKGLLDASTDEEDDNFSMASTVVADEGSQVGCASRRGKRRHAAAMKDDHEDGIEHEEGSDSCADQIESGDKSKLAQTLVPSKLRVVDLRRELRARGLPSSGLKAQLVEKLEAALEMEDLEGEKEPELPEILEGDEEENDDEVQEGAEQVQRAAKVAKHSASTSSASSYSSAIAPSEEAAPPVPSSRRMSRSSKAKNSGGAAKKLQSRPSSSDSNCRRSSRGMKSAASAMGVETQTHDAGAHEPELPAVDEGASAESFSIGEDVTPGSQAPVAVSPQEGAVLANDPACTNNGGASRHTGDSRAETAVVEAVAEQVSSAREILAPTPAPVVTSAGKEKLDSVSRSLPTPVPSSSSTASSVNSLLQSSAGSSTSGAGSGSGHALAKAPSSAKDIAAKISALRRGQLEEKSRANKGGGASASSRSANAAASSTAQANAATLTQPLSFLERLKLTTASFASGNASSHSNANSSNSSKAPAAAPKPAPVEAVSLVSDADTSVPPLKAASTTPLPATAAPPPPSGSNPPDPADDSPTGSVSAARLESSTGHASHLGKGAAEETPVSGMDQRNTERAGAEASHQSDTIAAKTMPVVKNARPPSNSHASPQINAAPGAPASGKGSKPAPSNLVGGLHSFTSLLKKGPAEGGSSSASSTAPASGGMRVVEVKALKRAEAARKADMVKEEERRQRKLLMERAIQQKKADATRLEQEAHKKRAELAAKRKEREEKLGAGGGGMPTANAAAVSAASAISGIGKAGPQAGNEEHKKPRIEGLGGAPARDGLPSATAPLSSVPRPPNTVPNLSNSRPGAPIDRLKSPMPAPKQANGGSCNAGSALKDISNKQASNASVPGASAAAAGGGSKGEYASKPGMSTSASQPHANATFGSLAGKLGVGESYEISDREESSDDDYDSDGGGGGKGKAAAKRVPDWAKGPALREALEAQFNKKHKVDPDSIFPEVRTCDLEEIFKSYQQGGAQAKKRAYRQRQSTGNWQRDELSSAEKTRYREDMGYGHS
Sbjct:    1 MTTRSSRSSNSGVKNDQSSGNNIQRTASKGGPTIQRVVDMLFDTSRAAKEQLEAEHKEHLGWLANALNHLRTRVLAGEMDEAAVEGKMNTSDQISEASGAEQHVRQSKRKKEYACRPRTSKGLLDASTDEEDDNFSMASTVVADEGSQVGCASRRGKRRHAAAMKDDHEDGIEHEEGSDSCADQIESGDKSKLAQTLVPSKLRVVDLRRELRARGLPSSGLKAQLVEKLEAALEMEDLEGEKEPELPEILEGDEEENDDEVQEGAEQVQRAAKVAKHSASTSSASSYSSAIAPSEEAAPPVPSSRRMSRSSKAKNSGGAAKKLQSRPSSSDSNCRRSSRGMKSAASAMGVETQTHDAGAHEPELPAVDEGASAESFSIGEDVTPGSQAPVAVSPQEGAVLANDPACTNNGGASRHTGDSRAETAVVEAVAEQVSSAREILAPTPAPVVTSAGKEKLDSVSRSLPTPVPSSSSTASSVNSLLQSSAGSSTSGAGSGSGHALAKAPSSAKDIAAKISALRRGQLEEKSRANKGGGASASSRSANAAASSTAQANAATLTQPLSFLERLKLTTASFASGNASSHSNANSSNSSKAPAAAPKPAPVEAVSLVSDADTSVPPLKAASTTPLPATAAPPPPSGSNPPDPADDSPTGSVSAARLESSTGHASHLGKGAAEETPVSGMDQRNTERAGAEASHQSDTIAAKTMPVVKNARPPSNSHASPQINAAPGAPASGKGSKPAPSNLVGGLHSFTSLLKKGPAEGGSSSASSTAPASGGMRVVEVKALKRAEAARKADMVKEEERRQRKLLMERAIQQKKADATRLEQEAHKKRAELAAKRKEREEKLGAGGGGMPTANAAAVSAASAISGIGKAGPQAGNEEHKKPRIEGLGGAPARDGLPSATAPLSSVPRPPNTVPNLSNSRPGAPIDRLKSPMPAPKQANGGSCNAGSALKDISNKQASNASVPGASAAAAGGGSKGEYASKPGMSTSASQPHANATFGSLAGKLGVGESYEISDREESSDDDYDSDGGGGGKGKAAAKRVPDWAKGPALREALEAQFNKKHKVDPDSIFPEVRTCDLEEIFKSYQQGGAQAKKRAYRQRQSTGNWQRDELSSAEKTRYREDMGYGHS 1127
The following BLAST results are available for this feature:
BLAST of EWM24703.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106231|gb|EWM24703.1|0.000e+0100.00incenp protein [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5979rna5979Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications