EWM24700.1, cds5963 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24700.1 vs. NCBI_GenBank
Match: gi|585106228|gb|EWM24700.1| (dna mismatch repair protein mlh1 isoform 1 [Nannochloropsis gaditana]) HSP 1 Score: 1335.86 bits (3456), Expect = 0.000e+0 Identity = 650/650 (100.00%), Postives = 650/650 (100.00%), Query Frame = 0 Query: 1 MRGGDGTSSGKSTGNTLCSAQKDTLDTDSVNLPCIRRLDADVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTCDSPCAYKARFQDGKLVPGVGAGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVSSEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTDLTQVIGAPGPPTLEQGDDRSTMIEDKDIEGRDGEGAVQAKRKERQALLPYKMIRTDASMRNLRSFLYTPEADDYHSQQQSQPSPQDENPDSQDAAQLSSPLAAEVDSRNHDKQEGDSGTEKKEEVPDVRDDGAVPLVVASSSTATVGEREGGREGGKDRHYRRRLPSFTETKCQYLSVRALLADIHDRVHQYEGGREGGRGAGGKVV 650 MRGGDGTSSGKSTGNTLCSAQKDTLDTDSVNLPCIRRLDADVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTCDSPCAYKARFQDGKLVPGVGAGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVSSEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTDLTQVIGAPGPPTLEQGDDRSTMIEDKDIEGRDGEGAVQAKRKERQALLPYKMIRTDASMRNLRSFLYTPEADDYHSQQQSQPSPQDENPDSQDAAQLSSPLAAEVDSRNHDKQEGDSGTEKKEEVPDVRDDGAVPLVVASSSTATVGEREGGREGGKDRHYRRRLPSFTETKCQYLSVRALLADIHDRVHQYEGGREGGRGAGGKVV Sbjct: 1 MRGGDGTSSGKSTGNTLCSAQKDTLDTDSVNLPCIRRLDADVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTCDSPCAYKARFQDGKLVPGVGAGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVSSEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTDLTQVIGAPGPPTLEQGDDRSTMIEDKDIEGRDGEGAVQAKRKERQALLPYKMIRTDASMRNLRSFLYTPEADDYHSQQQSQPSPQDENPDSQDAAQLSSPLAAEVDSRNHDKQEGDSGTEKKEEVPDVRDDGAVPLVVASSSTATVGEREGGREGGKDRHYRRRLPSFTETKCQYLSVRALLADIHDRVHQYEGGREGGRGAGGKVV 650
BLAST of EWM24700.1 vs. NCBI_GenBank
Match: gi|553187791|ref|XP_005854679.1| (DNA mismatch repair protein MLH1, partial [Nannochloropsis gaditana CCMP526] >gi|422294380|gb|EKU21680.1| DNA mismatch repair protein MLH1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1008.82 bits (2607), Expect = 0.000e+0 Identity = 490/493 (99.39%), Postives = 491/493 (99.59%), Query Frame = 0 Query: 96 RVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTCDSPCAYKARFQDGKLVPGVGAGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVSSEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTDLTQVIGAPGPPTLEQGDDRSTMIEDKDIEGRDGEGAVQAKRKERQALLPYKMIRTDASMRNLRSFLYTPEADDYHSQQQSQPSPQDENPDSQDAAQLSSPLAAEVDSRNHDKQEGDSGTEKKEEVPDVRDDGAVPLVVASSSTAT 588 +VTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKT DSPCAYKARFQDGKLVPGVG GGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVSSEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTDLTQVIGAPGPPTLEQGDDRSTMIEDKDIEGRDGEGAVQAKRKERQALLPYKMIRTDASMRNLRSFLYTPEADDYHSQQQSQPSPQDENPDSQDAAQLSSPLAAEVDSRNHDKQEGDSGTEKKEEVPDVRDDGAVPLVVASSSTAT Sbjct: 7 QVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTRDSPCAYKARFQDGKLVPGVGVGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVSSEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTDLTQVIGAPGPPTLEQGDDRSTMIEDKDIEGRDGEGAVQAKRKERQALLPYKMIRTDASMRNLRSFLYTPEADDYHSQQQSQPSPQDENPDSQDAAQLSSPLAAEVDSRNHDKQEGDSGTEKKEEVPDVRDDGAVPLVVASSSTAT 499
BLAST of EWM24700.1 vs. NCBI_GenBank
Match: gi|299471543|emb|CBN80029.1| (MutL protein homolog 1 [Ectocarpus siliculosus]) HSP 1 Score: 457.603 bits (1176), Expect = 2.210e-144 Identity = 230/400 (57.50%), Postives = 285/400 (71.25%), Query Frame = 0 Query: 35 IRRLDADVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTCDSPCAYKARFQDGKLVPGVGAGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVSSEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSL 434 I +LD DVVNRIAAGEVV +PANAVKEL+ENSLDAG+ SI VT K GG++LLQIQD+GHGIR D P++CERFTTSKLR F DLR++++FGFRGEALASITH A+V+ITSKT S AYKA++ DG+LV G G G +A P+PCAG GTTI AEDLFYNM TRR+A K+P + Y+ +LDVVTRYAVHFG G+SFTC+K GQ PDL+TP R +S L I+VAFG L REL+EL S E E +GA G +PSK +FKA G VS A+++ K+ F+LFIN+R+VES +IK+ +ES Y +LP +THPF+YL + +P H+DVNVHPTKREVHFLH++ELL L +E L GAN SRTFY + + Sbjct: 11 ILKLDEDVVNRIAAGEVVQRPANAVKELMENSLDAGSTSITVTAKQGGLKLLQIQDNGHGIRREDLPIVCERFTTSKLREFGDLRTMSTFGFRGEALASITHTAKVTITSKTPSSQVAYKAKYSDGRLVAG-GPGQSADPKPCAGVTGTTILAEDLFYNMDTRRRAFKSPGEQYKGILDVVTRYAVHFGDRGVSFTCKKHGQPSPDLHTPPR-SSCLANIRVAFGPALSRELVELECSQAE--ELLDQGADGGEVAPSK------------------------------FAFKAKGLVSGADYSAKRSDFILFINDRLVESPSIKKTVESAYKDVLPKNTHPFVYLGITMPSHHLDVNVHPTKREVHFLHQEELLECLRQAVEQKLAGANQSRTFYSQVI 376
BLAST of EWM24700.1 vs. NCBI_GenBank
Match: gi|511003378|gb|EPB84782.1| (hypothetical protein HMPREF1544_08425 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 433.721 bits (1114), Expect = 4.623e-140 Identity = 233/517 (45.07%), Postives = 320/517 (61.90%), Query Frame = 0 Query: 29 SVNLPCIRRLDADVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTCDSPCAYKARFQDGKLVPGVGAGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVSSEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTDLTQVIGAPGPPTLEQGDDRSTMIEDKDIEGRDGEGAVQAKRKERQALLP-YKMIRTDASMRNLRSFLYTPEADDYHSQQQSQPSPQDENP---DSQDAAQLS 541 S+ +P +R+LD VVNRIAAGEV+ +PANA+KEL+EN LDAG+ I + VKDGG++LLQIQD+GHGIR D P++CERFTTSKL FEDL I++ GFRGEALASI+HVA V+IT+KT DSPCAY+A + DGKLVP G +A P+ CAG NGT ITAEDLFYN+ TRR+A K+ +D Y +LD+V+RYAVH G+SF+CRKQG + D+ T GAS + I++ G V ELL+++ + +E R FK +G++SNAN+N+KK F+LFIN+R VES++IKR +E++Y+ +LP HPF+YL+L++ P +VDVNVHPTK+EVHFLHE+ ++ + + L AN SRTFY ++L G + P T D D+E ++G+ V+ K + +P YK +RTD+ + L +F+Y P QQ Q P+ E+ D+ DA+ LS Sbjct: 2 SIEIPKVRKLDEKVVNRIAAGEVIQRPANALKELIENCLDAGSTQIQILVKDGGLKLLQIQDNGHGIRKEDMPIVCERFTTSKLSRFEDLTGISTHGFRGEALASISHVAHVTITTKTADSPCAYRALYSDGKLVPA-KPGQSADPKACAGNNGTQITAEDLFYNVPTRRKAFKSSSDEYNRILDIVSRYAVH--NAGVSFSCRKQGSSVADVQT-STGASTVDNIRLLHGSV-ASELLDIDRTFDELR------------------------------------------------FKMNGHISNANYNVKKMTFLLFINHRAVESSSIKRAIENIYSLLLPKGAHPFVYLSLEIDPQNVDVNVHPTKKEVHFLHENRIIGAICDAFQETLENANHSRTFYTQALLPGASDPAKKTS--------------------HDSDVEEQEGDH-VEPKHISKSTTVPEYKYVRTDSRVTTLDTFIYKPAL-----QQPQQTRPESEDSMEIDTDDASHLS 439
BLAST of EWM24700.1 vs. NCBI_GenBank
Match: gi|1026264766|gb|OAC97930.1| (hypothetical protein MUCCIDRAFT_86729 [Mucor circinelloides f. lusitanicus CBS 277.49]) HSP 1 Score: 419.853 bits (1078), Expect = 8.059e-135 Identity = 219/484 (45.25%), Postives = 306/484 (63.22%), Query Frame = 0 Query: 30 VNLPCIRRLDADVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTCDSPCAYKARFQDGKLVPGVGAGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVSSEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTDLTQVIGAPGPPTLEQGDDRSTMIEDKDIEGRDGEGAVQAKRKERQALLP-YKMIRTDASMRNLRSFLYTP 512 + +P +R+LD VVNRIAAGEV+ +PANA+KEL+EN LDAG+ I + VKDGG++LLQIQD+GHGIR D P++CERFTTSKL FEDL I++ GFRGEALASI+HVA V+IT+KT DSPCAY+A + DGKLVP G +A P+ CAG NGT ITAEDLFYN+ TRR+A K+P+D Y +LD+V+RYA+H G+SF+CRKQG D+ T GA+ + I++ G V ELL+++ + +E R FK +G++SNAN+++KK F+LFIN+R VES+++KR +E++Y+ +LP HPF+YL+L++ P +VDVNVHP+K+EVHFLHE+ ++ + + L AN SRTFY ++L G + PT T D+D E + +GA++ K + +P YK +RTD+ + L +F+Y P Sbjct: 3 IEIPKVRKLDEKVVNRIAAGEVIQRPANALKELIENCLDAGSTQIQILVKDGGLKLLQIQDNGHGIRKEDMPIVCERFTTSKLNRFEDLTGISTHGFRGEALASISHVAHVTITTKTADSPCAYRALYSDGKLVPA-KPGQSADPKACAGNNGTQITAEDLFYNVPTRRKAFKSPSDEYNRILDIVSRYAIHNA--GVSFSCRKQGSNIADVQT-STGATTVDNIRLLHGSV-ASELLDIDKTFDELR------------------------------------------------FKMNGHISNANYSVKKMTFLLFINHRAVESSSVKRAIENIYSLLLPKGAHPFVYLSLEIDPQNVDVNVHPSKKEVHFLHENRIIEAICDAFQEALENANHSRTFYTQALLPGASDPTKKTTT--------------------DQDGEELE-DGALEPKSTLKPTTVPEYKYVRTDSRVTTLDTFIYKP 412
BLAST of EWM24700.1 vs. NCBI_GenBank
Match: gi|729715677|emb|CEI88055.1| (Putative DNA mismatch repair protein (Fragment) [Rhizopus microsporus]) HSP 1 Score: 414.461 bits (1064), Expect = 8.932e-135 Identity = 223/482 (46.27%), Postives = 299/482 (62.03%), Query Frame = 0 Query: 33 PCIRRLDADVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTCDSPCAYKARFQDGKLVPGVGAGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVSSEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTDLTQVIGAPGPPTLEQGDDRSTMIEDKDIEGRDGEGAVQAKRKERQALLPYKMIRTDASMRNLRSFLYTPEA 514 P I+RLD VVNRIAAGEV+ +PANA+KEL+ENSLDAG+ I +++KDGG++LLQIQD+GHGIR D ++CERFTTSKL FEDL IA++GFRGEALASI+HVA V+IT+KT DSPCAY+A + DGKLVP G +A P+PCAG NGT ITAEDLFYN+ TRR+ALK+ ++ Y +LD+ TRYAVH G+SFTCRK G D+ TP GAS L I++ +G V ELL VE E +E FK GY+SNAN++ K+ F+LFIN+R V+S IKR +E++Y+ +LP HPF+YL+L++ P +VDVNVHPTK+EVHFL+ED ++ + + +++L AN+SRTFY + L G + P + + RS DK I + + + YK +RTD+ M L +F Y+ ++ Sbjct: 4 PRIKRLDQAVVNRIAAGEVIQRPANALKELIENSLDAGSTQIQISIKDGGLKLLQIQDNGHGIRKEDMTIVCERFTTSKLSKFEDLSQIATYGFRGEALASISHVAHVTITTKTADSPCAYRASYSDGKLVPA-RPGQSADPKPCAGNNGTQITAEDLFYNVPTRRKALKSASEEYNKILDITTRYAVH--NSGVSFTCRKLGTNVSDIQTPT-GASTLDNIRLLYGSV-ASELL------------------------------PVEKNFEEVE------------------FKLKGYISNANYSSKRTTFLLFINHRAVDSLNIKRAIENLYSSLLPKGGHPFIYLSLEINPRNVDVNVHPTKKEVHFLYEDRVVEGIISAFQSVLENANSSRTFYTQVLLPGASKPN---------------EQEKRS----DKPI-------SRPSSSSSSNTVAEYKYVRTDSKMNQLETFGYSIQS 406
BLAST of EWM24700.1 vs. NCBI_GenBank
Match: gi|729697009|emb|CEJ05402.1| (Putative DNA mismatch repair protein (Fragment) [Rhizopus microsporus]) HSP 1 Score: 408.683 bits (1049), Expect = 3.490e-134 Identity = 207/411 (50.36%), Postives = 276/411 (67.15%), Query Frame = 0 Query: 33 PCIRRLDADVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTCDSPCAYKARFQDGKLVPGVGAGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVSSEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTD 443 P I++LD VVNRIAAGEV+ +PANA+KEL+ENSLDAG+ I +++KDGG++LLQIQD+GHGIR D ++CERFTTSKL FEDL IA++GFRGEALASI+HVA V+IT+KT DSPCAY+A + DGKLVP G +A P+PCAG NGT ITAEDLFYN+ TRR+ALK+ ++ Y +LD+ TRYAVH G+SFTCRK G D+ TP GAS L I++ +G V+ ELL + S EE + FK GY+SNAN++ K+ F+LFIN+R V+S IKR +E++Y+ +LP HPF+YL+L++ P +VDVNVHPTK+EVHFL+ED ++ + + +++L AN+SRTFY + L G + P + Sbjct: 4 PSIKKLDQAVVNRIAAGEVIQRPANALKELIENSLDAGSTQIQISIKDGGLKLLQIQDNGHGIR--DMAIVCERFTTSKLSKFEDLSQIATYGFRGEALASISHVAHVTITTKTADSPCAYRASYSDGKLVPA-RPGQSADPKPCAGNNGTQITAEDLFYNVPTRRKALKSASEEYNRILDITTRYAVH--NSGVSFTCRKLGTNVSDIQTPT-GASTLDNIRLLYGSVVS-ELLPVEKSFEE------------------------------------------------VEFKLKGYISNANYSSKRTTFLLFINHRAVDSLNIKRAIENLYSSLLPKGGHPFIYLSLEINPRNVDVNVHPTKKEVHFLYEDRVVEGIISTFQSVLENANSSRTFYTQVLLPGASKPNE 359
BLAST of EWM24700.1 vs. NCBI_GenBank
Match: gi|1178061395|gb|ORE15928.1| (DNA mismatch repair protein hexB [Rhizopus microsporus]) HSP 1 Score: 410.994 bits (1055), Expect = 2.186e-131 Identity = 223/482 (46.27%), Postives = 299/482 (62.03%), Query Frame = 0 Query: 33 PCIRRLDADVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTCDSPCAYKARFQDGKLVPGVGAGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVSSEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTDLTQVIGAPGPPTLEQGDDRSTMIEDKDIEGRDGEGAVQAKRKERQALLPYKMIRTDASMRNLRSFLYTPEA 514 P I+RLD VVNRIAAGEV+ +PANA+KEL+ENSLDAG+ I +++KDGG++LLQIQD+GHGIR D ++CERFTTSKL FEDL IA++GFRGEALASI+HVA V+IT+KT DSPCAY+A + DGKLVP G +A P+PCAG NGT ITAEDLFYN+ TRR+ALK+ ++ Y +LD+ TRYAVH G+SFTCRK G D+ TP GAS L I++ +G V ELL VE E +E FK GY+SNAN++ K+ F+LFIN+R V+S IKR +E++Y+ +LP HPF+YL+L++ P +VDVNVHPTK+EVHFL+ED ++ + + +++L AN+SRTFY + L G + P + + RS DK I + + + YK +RTD+ M L +F Y+ ++ Sbjct: 4 PRIKRLDQAVVNRIAAGEVIQRPANALKELIENSLDAGSTQIQISIKDGGLKLLQIQDNGHGIRKEDMTIVCERFTTSKLSKFEDLSQIATYGFRGEALASISHVAHVTITTKTADSPCAYRASYSDGKLVPA-RPGQSADPKPCAGNNGTQITAEDLFYNVPTRRKALKSASEEYNKILDITTRYAVH--NSGVSFTCRKLGTNVSDIQTPT-GASTLDNIRLLYGSV-ASELL------------------------------PVEKNFEEVE------------------FKLKGYISNANYSSKRTTFLLFINHRAVDSLNIKRAIENLYSSLLPKGGHPFIYLSLEINPRNVDVNVHPTKKEVHFLYEDRVVEGIISAFQSVLENANSSRTFYTQVLLPGASKPN---------------EQEKRS----DKPI-------SRPSSSSSSNTVAEYKYVRTDSKMNQLETFGYSIQS 406
BLAST of EWM24700.1 vs. NCBI_GenBank
Match: gi|1043300609|gb|OBZ85589.1| (DNA mismatch repair protein Mlh1 [Choanephora cucurbitarum]) HSP 1 Score: 410.223 bits (1053), Expect = 3.268e-131 Identity = 216/481 (44.91%), Postives = 294/481 (61.12%), Query Frame = 0 Query: 31 NLPCIRRLDADVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTCDSPCAYKARFQDGKLVPGVGAGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVSSEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTDLTQVIGAPGPPTLEQGDDRSTMIEDKDIEGRDGEGAVQAKRKERQALLPYKMIRTDASMRNLRSFLYT 511 +P I++LD VVNRIAAGEV+ +PANA+KEL+ENSLDAG+ I + +KDGG++LLQIQD+GHGIR D ++CERFTTSKL FEDL I+++GFRGEALASI+HVA V+IT+KT +SPCAY+A + DG+L P G +A+P+ CAG NGT ITAEDLFYN+ TRR+ALK+P+D Y +LD+V+RYAVH GISFTCRKQG D+ T GA+V+ I+ +G + ELL + Q E L G ++NAN++MK+ +LFIN+R VES++IKR +ESVY+ +LP HPF+YL+L + P +VDVNVHPTK+EVHFLHE+ ++ L + +L ANTSRTFY ++L G++ PT Q +A RQ++ YK +RTD+ + L +F+++ Sbjct: 3 TIPSIKKLDQAVVNRIAAGEVIQRPANALKELIENSLDAGSTQIQILIKDGGLKLLQIQDNGHGIRKEDMRIVCERFTTSKLSKFEDLMGISTYGFRGEALASISHVAHVTITTKTAESPCAYRALYSDGQLTPA-RPGASAEPKACAGNNGTQITAEDLFYNVPTRRKALKSPSDEYNRILDIVSRYAVH--NAGISFTCRKQGATMADVQT-STGATVVDTIRQLYGSSVASELLPVE------------------------------------------------QSLETLDVTVKGQITNANYSMKRMTLLLFINHRAVESSSIKRAIESVYSALLPKGGHPFVYLSLQMDPKNVDVNVHPTKKEVHFLHEERIVQALGDVFQKVLENANTSRTFYTQALLPGVSDPTVEPQ----------------------------------EASFNHRQSVPEYKYVRTDSRVTTLDAFVHS 397
BLAST of EWM24700.1 vs. NCBI_GenBank
Match: gi|552915568|gb|ESA00848.1| (hypothetical protein GLOINDRAFT_38711 [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 412.149 bits (1058), Expect = 5.303e-131 Identity = 228/509 (44.79%), Postives = 317/509 (62.28%), Query Frame = 0 Query: 27 TDSVNLPCIRRLDADVVNRIAAGEVVAKPANAVKELVENSLDAGAKSIVVTVKDGGMRLLQIQDDGHGIRVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTCDSPCAYKARFQDGKLVPGVGAGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYRAVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLELNVSSEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTDLTQVIGAPGPPTLEQGDDRSTMIEDKDIEGRDGEGAVQAKRKERQALLPYKMIRTDASMRNLRSFLYTPEADDYHSQQQSQPSPQDEN-PDS 534 TD N IRRL+ VVNRIAAGE++ +PANA+KEL+ENSLDAGA +I +TVKDGG++LLQI D+GHGIR D ++CERFTTSKL++FEDL +I ++GFRGEALASI+HVA V+IT+KT DS CAY+A + DGKLVP G NA+P+ CAG GT ITAEDLFYN+ TRR+ALK+P+D Y +LDVV RYA+H G+SFTC+KQG + ++ T +SVL I+ +G + ELL L+ S ++ L FK +GY+SNAN+N+KK +F+LFIN+R VE++++K+ +ES+Y LP +THPF YL+L++ P +VDVNVHPTKREV FL+EDE+++ + ++ L GAN+SRTF LTQ + PG ++E + A + +K +L YK++RTD+ ++ L F P+ + ++ Q + P + N P+S Sbjct: 2 TDKTNPRPIRRLNETVVNRIAAGEIINRPANALKELIENSLDAGASNIQITVKDGGLKLLQILDNGHGIRKEDMTIVCERFTTSKLKNFEDLSNINTYGFRGEALASISHVAHVTITTKTADSNCAYRACYSDGKLVPA-KPGTNAEPKACAGNTGTQITAEDLFYNVPTRRKALKSPSDEYNRILDVVNRYAIH--NSGVSFTCKKQGSNQAEVNTLSM-SSVLDNIRQIYGSI-ASELLGLSKSFKK------------------------------------------------LEFKLNGYISNANYNLKKMIFLLFINHRAVENSSLKKAIESIYTTYLPKNTHPFAYLSLEINPQNVDVNVHPTKREVRFLNEDEVIAAVGDAIQESLAGANSSRTF--------------LTQTL-LPGAESIETNTNL----------------AENSIKKSGVKVLNYKLVRTDSRVQTLDDFC-NPD-NTFNMQPKDNPKKGNNNFPNS 424 The following BLAST results are available for this feature:
BLAST of EWM24700.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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