EWM24717.1, cds5957 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM24717.1 vs. NCBI_GenBank
Match: gi|585106251|gb|EWM24717.1| (hypothetical protein Naga_100978g4, partial [Nannochloropsis gaditana]) HSP 1 Score: 239.195 bits (609), Expect = 6.994e-80 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
Query: 1 MVLQAFVDRLRGVQEITVKRLYKFVLKKALGKFLAGQLGVDQLDVKFIVLEDDTTSAPPSPGAPPARRGYVQLRDIVMNVEAVNALLTDQPFKLHRGRLGKVEVRVCYEQVLREGMEVA 119
MVLQAFVDRLRGVQEITVKRLYKFVLKKALGKFLAGQLGVDQLDVKFIVLEDDTTSAPPSPGAPPARRGYVQLRDIVMNVEAVNALLTDQPFKLHRGRLGKVEVRVCYEQVLREGMEVA
Sbjct: 1 MVLQAFVDRLRGVQEITVKRLYKFVLKKALGKFLAGQLGVDQLDVKFIVLEDDTTSAPPSPGAPPARRGYVQLRDIVMNVEAVNALLTDQPFKLHRGRLGKVEVRVCYEQVLREGMEVA 119
BLAST of EWM24717.1 vs. NCBI_GenBank
Match: gi|953490877|emb|CEG46531.1| (thiamine pyrophosphokinase [Plasmopara halstedii]) HSP 1 Score: 64.6994 bits (156), Expect = 1.122e-9 Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query: 18 VKRLYKFVLKKALGKFLAG-QLGVDQLDVKFIVLEDDTTSAPPSPGAPPARRGYVQLRDIVMNVEAVNALLTDQ---PFKLHRGRLGKVEVRVCYEQVLRE 114
+KRLYKFVLK+ +G+FLA +L +DQLDV R G ++L D+++N E +NA L + PFK+ +G LG V V + Y ++ E
Sbjct: 288 LKRLYKFVLKRMIGRFLAADELDLDQLDVHL-------------------RSGRLELCDLLLNAEVLNAELCEAYGLPFKVKKGYLGSVRVAISYTNIMSE 369
BLAST of EWM24717.1 vs. NCBI_GenBank
Match: gi|570994197|gb|ETP51385.1| (hypothetical protein F442_03482 [Phytophthora parasitica P10297]) HSP 1 Score: 63.5438 bits (153), Expect = 2.843e-9 Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query: 18 VKRLYKFVLKKALGKFLAG-QLGVDQLDVKFIVLEDDTTSAPPSPGAPPARRGYVQLRDIVMNVEAVNALLTDQ---PFKLHRGRLGKVEVRVCYEQVLRE 114
+KRLYKFVLK+ +G+FLA +L +DQLDV R G ++L D+++N E +NA L + PFK+ +G LG V V + Y ++ E
Sbjct: 12 LKRLYKFVLKRMIGRFLAADELDLDQLDVHL-------------------RSGRLELCDLLLNAEVLNAELCEAQGLPFKVKKGYLGSVRVAISYANIMSE 93
BLAST of EWM24717.1 vs. NCBI_GenBank
Match: gi|675183563|ref|XP_008900666.1| (hypothetical protein PPTG_08345 [Phytophthora parasitica INRA-310] >gi|568098865|gb|ETN13583.1| hypothetical protein PPTG_08345 [Phytophthora parasitica INRA-310]) HSP 1 Score: 63.5438 bits (153), Expect = 2.843e-9 Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query: 18 VKRLYKFVLKKALGKFLAG-QLGVDQLDVKFIVLEDDTTSAPPSPGAPPARRGYVQLRDIVMNVEAVNALLTDQ---PFKLHRGRLGKVEVRVCYEQVLRE 114
+KRLYKFVLK+ +G+FLA +L +DQLDV R G ++L D+++N E +NA L + PFK+ +G LG V V + Y ++ E
Sbjct: 12 LKRLYKFVLKRMIGRFLAADELDLDQLDVHL-------------------RSGRLELCDLLLNAEVLNAELCEAQGLPFKVKKGYLGSVRVAISYANIMSE 93
BLAST of EWM24717.1 vs. NCBI_GenBank
Match: gi|568056451|gb|ETM53163.1| (hypothetical protein L914_03363 [Phytophthora parasitica]) HSP 1 Score: 63.5438 bits (153), Expect = 2.843e-9 Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query: 18 VKRLYKFVLKKALGKFLAG-QLGVDQLDVKFIVLEDDTTSAPPSPGAPPARRGYVQLRDIVMNVEAVNALLTDQ---PFKLHRGRLGKVEVRVCYEQVLRE 114
+KRLYKFVLK+ +G+FLA +L +DQLDV R G ++L D+++N E +NA L + PFK+ +G LG V V + Y ++ E
Sbjct: 12 LKRLYKFVLKRMIGRFLAADELDLDQLDVHL-------------------RSGRLELCDLLLNAEVLNAELCEAQGLPFKVKKGYLGSVRVAISYANIMSE 93
BLAST of EWM24717.1 vs. NCBI_GenBank
Match: gi|568025999|gb|ETM00001.1| (hypothetical protein L917_03263 [Phytophthora parasitica]) HSP 1 Score: 63.5438 bits (153), Expect = 2.843e-9 Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query: 18 VKRLYKFVLKKALGKFLAG-QLGVDQLDVKFIVLEDDTTSAPPSPGAPPARRGYVQLRDIVMNVEAVNALLTDQ---PFKLHRGRLGKVEVRVCYEQVLRE 114
+KRLYKFVLK+ +G+FLA +L +DQLDV R G ++L D+++N E +NA L + PFK+ +G LG V V + Y ++ E
Sbjct: 12 LKRLYKFVLKRMIGRFLAADELDLDQLDVHL-------------------RSGRLELCDLLLNAEVLNAELCEAQGLPFKVKKGYLGSVRVAISYANIMSE 93
BLAST of EWM24717.1 vs. NCBI_GenBank
Match: gi|566030677|gb|ETI53588.1| (hypothetical protein F443_03500 [Phytophthora parasitica P1569]) HSP 1 Score: 63.5438 bits (153), Expect = 2.843e-9 Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query: 18 VKRLYKFVLKKALGKFLAG-QLGVDQLDVKFIVLEDDTTSAPPSPGAPPARRGYVQLRDIVMNVEAVNALLTDQ---PFKLHRGRLGKVEVRVCYEQVLRE 114
+KRLYKFVLK+ +G+FLA +L +DQLDV R G ++L D+++N E +NA L + PFK+ +G LG V V + Y ++ E
Sbjct: 12 LKRLYKFVLKRMIGRFLAADELDLDQLDVHL-------------------RSGRLELCDLLLNAEVLNAELCEAQGLPFKVKKGYLGSVRVAISYANIMSE 93
BLAST of EWM24717.1 vs. NCBI_GenBank
Match: gi|970628964|gb|KUF76380.1| (Autophagy-related protein 2 [Phytophthora nicotianae] >gi|970656335|gb|KUF94359.1| Autophagy-related protein 2 [Phytophthora nicotianae]) HSP 1 Score: 63.5438 bits (153), Expect = 2.956e-9 Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query: 18 VKRLYKFVLKKALGKFLAG-QLGVDQLDVKFIVLEDDTTSAPPSPGAPPARRGYVQLRDIVMNVEAVNALLTDQ---PFKLHRGRLGKVEVRVCYEQVLRE 114
+KRLYKFVLK+ +G+FLA +L +DQLDV R G ++L D+++N E +NA L + PFK+ +G LG V V + Y ++ E
Sbjct: 12 LKRLYKFVLKRMIGRFLAADELDLDQLDVHL-------------------RSGRLELCDLLLNAEVLNAELCEAQGLPFKVKKGYLGSVRVAISYANIMSE 93
BLAST of EWM24717.1 vs. NCBI_GenBank
Match: gi|570334344|gb|ETO82292.1| (hypothetical protein F444_03554 [Phytophthora parasitica P1976]) HSP 1 Score: 63.5438 bits (153), Expect = 2.956e-9 Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query: 18 VKRLYKFVLKKALGKFLAG-QLGVDQLDVKFIVLEDDTTSAPPSPGAPPARRGYVQLRDIVMNVEAVNALLTDQ---PFKLHRGRLGKVEVRVCYEQVLRE 114
+KRLYKFVLK+ +G+FLA +L +DQLDV R G ++L D+++N E +NA L + PFK+ +G LG V V + Y ++ E
Sbjct: 12 LKRLYKFVLKRMIGRFLAADELDLDQLDVHL-------------------RSGRLELCDLLLNAEVLNAELCEAQGLPFKVKKGYLGSVRVAISYANIMSE 93
BLAST of EWM24717.1 vs. NCBI_GenBank
Match: gi|567996766|gb|ETL46868.1| (hypothetical protein L916_03323 [Phytophthora parasitica]) HSP 1 Score: 63.5438 bits (153), Expect = 2.956e-9 Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query: 18 VKRLYKFVLKKALGKFLAG-QLGVDQLDVKFIVLEDDTTSAPPSPGAPPARRGYVQLRDIVMNVEAVNALLTDQ---PFKLHRGRLGKVEVRVCYEQVLRE 114
+KRLYKFVLK+ +G+FLA +L +DQLDV R G ++L D+++N E +NA L + PFK+ +G LG V V + Y ++ E
Sbjct: 12 LKRLYKFVLKRMIGRFLAADELDLDQLDVHL-------------------RSGRLELCDLLLNAEVLNAELCEAQGLPFKVKKGYLGSVRVAISYANIMSE 93 The following BLAST results are available for this feature:
BLAST of EWM24717.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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