EWM24718.1, cds5955 (CDS) Nannochloropsis gaditana

Overview
NameEWM24718.1
Unique Namecds5955
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:244626..245897 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24718.1
Productzinc-binding integral peroxisomal membrane protein PEX12
Orig transcript idgnl|cribi|Naga_100978g1.1502.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:244626..245897 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0016043cellular component organization
GO:0006625protein targeting to peroxisome
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005777peroxisome
GO:0005779integral component of peroxisomal membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0008022protein C-terminus binding
Vocabulary: INTERPRO
TermDefinition
IPR017375PEX12
IPR013083Znf_RING/FYVE/PHD
IPR006845Pex_N
Homology
BLAST of EWM24718.1 vs. NCBI_GenBank
Match: gi|585106252|gb|EWM24718.1| (zinc-binding integral peroxisomal membrane protein PEX12 [Nannochloropsis gaditana])

HSP 1 Score: 872.848 bits (2254), Expect = 0.000e+0
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0
Query:    1 MEIYMFTPQESPLLRPSHGNMSIGGMFLAHEMGTDPHYPSFFEVFMQDRIHQSLKPAVRHVFLVLAERWPQAVVLLDHLDEVFAIMSLFLERHYLAKNDALFSESLYGFKRSRYRSQEGTGPRNEQHRKADNSNTSNVTGQSEHMKMSALTQGDRRLALLVTILAPYAKAKLDALYIHYKDTLLPSPVVNRRSWWGGNGSSRGQGRRWRSGRGESGTAGGAAHSGVEGEEDEQKEEIRVRLRRVFVAMYPLLHAAYEGSFFVYQWTYLLGRRKQYSPLLHIAGQVLRRLSQEDVQPPAPSITEKKSLTARLVRSFKVLLLLGIVAFKLLEWWMSSPDFLQSPRQKRIVPPVPDPPAPAPTGVPLPKDAVLCPLCLRPRVNPAVTSAGVVFCYKCLLPEVRKAGVCPVTLQPCREEQVRRIYLT 423
            MEIYMFTPQESPLLRPSHGNMSIGGMFLAHEMGTDPHYPSFFEVFMQDRIHQSLKPAVRHVFLVLAERWPQAVVLLDHLDEVFAIMSLFLERHYLAKNDALFSESLYGFKRSRYRSQEGTGPRNEQHRKADNSNTSNVTGQSEHMKMSALTQGDRRLALLVTILAPYAKAKLDALYIHYKDTLLPSPVVNRRSWWGGNGSSRGQGRRWRSGRGESGTAGGAAHSGVEGEEDEQKEEIRVRLRRVFVAMYPLLHAAYEGSFFVYQWTYLLGRRKQYSPLLHIAGQVLRRLSQEDVQPPAPSITEKKSLTARLVRSFKVLLLLGIVAFKLLEWWMSSPDFLQSPRQKRIVPPVPDPPAPAPTGVPLPKDAVLCPLCLRPRVNPAVTSAGVVFCYKCLLPEVRKAGVCPVTLQPCREEQVRRIYLT
Sbjct:    1 MEIYMFTPQESPLLRPSHGNMSIGGMFLAHEMGTDPHYPSFFEVFMQDRIHQSLKPAVRHVFLVLAERWPQAVVLLDHLDEVFAIMSLFLERHYLAKNDALFSESLYGFKRSRYRSQEGTGPRNEQHRKADNSNTSNVTGQSEHMKMSALTQGDRRLALLVTILAPYAKAKLDALYIHYKDTLLPSPVVNRRSWWGGNGSSRGQGRRWRSGRGESGTAGGAAHSGVEGEEDEQKEEIRVRLRRVFVAMYPLLHAAYEGSFFVYQWTYLLGRRKQYSPLLHIAGQVLRRLSQEDVQPPAPSITEKKSLTARLVRSFKVLLLLGIVAFKLLEWWMSSPDFLQSPRQKRIVPPVPDPPAPAPTGVPLPKDAVLCPLCLRPRVNPAVTSAGVVFCYKCLLPEVRKAGVCPVTLQPCREEQVRRIYLT 423          
BLAST of EWM24718.1 vs. NCBI_GenBank
Match: gi|1026959337|ref|XP_016611266.1| (hypothetical protein SPPG_02281 [Spizellomyces punctatus DAOM BR117] >gi|907097755|gb|KND03227.1| hypothetical protein SPPG_02281 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 183.726 bits (465), Expect = 2.019e-50
Identity = 145/413 (35.11%), Postives = 198/413 (47.94%), Query Frame = 0
Query:   33 GTDPHYPSFFEVFMQDRIHQSLKPAVRHVFLVLAERWPQAVV-LLDHLDEVFAIMSLFLERHYLAKNDALFSESLYGFKRSRYRSQEGTGPRNEQHRKADNSNTSNVTGQSEHMKMSALTQGDRRLALLVTILAPYAKAKLDALYIHYKDTLLPSPVVNRRSWWGGNGSSRGQGRRWRSGRGESGTAGGAAHSGVEGEEDEQKEEIRVR--LRRVFVAMYPLLHAAYEGSFFVYQWTYLLGRRKQYSPLLHIAGQVLRRL------SQEDVQPPAPSITEK-----------KSLTARLV-RSFKVL---LLLGIVAFKLLEWWMSSPDFLQSPRQKRIVPPVPDPPAPAPTGVPLPKDAVLCPLCLRPRVNPAVTSAGVVFCYKCLLPEVRKAGVCPVTLQPCREEQVRRIY 421
              D + PS FE+  QD++   LKPA+R+V  V A+R+P+ ++ L++  DEVFAI+ L +E+HYL + +A F+E  YG KRS        GP   + RK             EH+  S   Q  R L LLV +  PYAK KLD LY                S  GG GS                  G    +  EG   E+   IR+R   +++F   YP ++A+Y+   FVYQ  Y+ G+   YSP LH+ G  +RR+        ED Q      +E            + L A +V R F  L   L + I  FK LEWW +S    Q+  Q    PP P  P PA  GVPLP D  +CPLC + R NP +  +G VFCY C+   V +   CP+T  P   E++R+IY
Sbjct:   10 AADVYRPSVFELIAQDKMRDLLKPALRYVLAVYAQRYPRHLLRLVNRHDEVFAILMLLIEQHYLREWNASFAEHFYGLKRS------AAGP--TRRRKG-----------LEHLSSS---QIWRSLVLLVAL--PYAKTKLDELY---------------ESTTGGPGSR---------------IFGDLFSNVEEGSTLEEPLPIRLRKLAKKIFQRTYPYINASYQAFIFVYQIGYMYGKTDYYSPWLHLCGLQIRRMGAKDYRDHEDRQQVLKKASEAALQNASRLRVLRHLLATIVSRGFDFLKYALPMSIFFFKFLEWWYTSEYHKQAGNQPIPPPPKPLEPNPA--GVPLPTDPSICPLCTKQRTNPTMLPSGYVFCYPCIYKYVEEHERCPITFLPTTTEELRKIY 366          
BLAST of EWM24718.1 vs. NCBI_GenBank
Match: gi|1183371863|gb|ORX97663.1| (hypothetical protein K493DRAFT_300330 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 180.644 bits (457), Expect = 2.427e-49
Identity = 135/405 (33.33%), Postives = 198/405 (48.89%), Query Frame = 0
Query:   35 DPHYPSFFEVFMQDRIHQSLKPAVRHVFLVLAERWPQAVV-LLDHLDEVFAIMSLFLERHYLAKNDALFSESLYGFKRSRYRSQEGTGPRNEQHRKADNSNTSNVTGQSEHMKMSALTQGDRRLALLVTILAPYAKAKLDALYIHYKDTLLPSPVVNRRSWWGGNGSSRGQGRRWRSGRGESGTAGGAAHSGVEGEEDEQKEEIRVRLRRVFVAMYPLLHAAYEGSFFVYQWTYLLGRRKQYSPLLHIAGQVLRRLSQEDV----QPPAPSITE----------KKSLTARLVRSF---KVLLLLGIVAFKLLEWWMSSPDFLQSPRQKRIVPPVPDPPAPAPTGVPLPKDAVLCPLCLRPRVNPAVTSAGVVFCYKCLLPEVRKAGVCPVTLQPCREEQVRRIY 421
            D + PS FE+  QD++   L+PAVR+V  V A+R+P+ ++ +++H +E+F     F+ERHYL +    F+E+ YG KR+R              +K + S+               LT+ D   +L  +I  PY K+KLD LY             ++ S  GG+G+            GE  +A G A +  E  +   KE+++ R++++F  +YP L+ AY  +   Y   YL  R   Y+P L + G  +RRL   D     Q   PS             K+ L   + R F   KVLL + I  FK LEWW SS       + ++ +PP P+P  P P GVPLP++   CPLC R R NP +   G VFCY C+   V + G CPVTL     EQ+ +IY
Sbjct:   12 DMYRPSLFELVAQDKMRDMLQPAVRYVLTVYAQRYPRYLLRVVNHFEEIFNCAMFFVERHYLRRYGGTFAENFYGLKRTR-------------TQKIEESD--------------KLTERDVYNSLFFSIGLPYLKSKLDGLY-------------DKVS--GGSGALLF---------GEEFSALGRAQNPTE--QLSTKEKLKARIKKLFKTLYPYLNCAYHLATLGYNIGYLYDRTAFYTPWLRLIGVQVRRLDISDYKEMYQRQNPSAVGWSGLSRTQFLKRLLFTGIERGFDFLKVLLPMSIFFFKFLEWWYSSE--YSRAQTQQPIPPPPEPVKPDPNGVPLPENRGHCPLCQRERTNPTMLPTGYVFCYPCIFKYVEEHGCCPVTLVSTSTEQLHKIY 361          
BLAST of EWM24718.1 vs. NCBI_GenBank
Match: gi|586775422|ref|XP_006857493.1| (peroxisome biogenesis protein 12 [Amborella trichopoda] >gi|548861586|gb|ERN18960.1| hypothetical protein AMTR_s00067p00205070 [Amborella trichopoda])

HSP 1 Score: 177.563 bits (449), Expect = 7.304e-48
Identity = 129/422 (30.57%), Postives = 206/422 (48.82%), Query Frame = 0
Query:   31 EMGTDPHYPSFFEVFMQDRIHQSLKPAVRHVFLVLAERWPQAVVLLDHLDEVFAIMSLFLERHYLAKNDALFSESLYGFKRSRYRSQEGTGPRNEQHRKADNSNTSNVTGQSEHMKMSALTQGDRRLALLVTILAPYAKAKLDALYIHYKDTLLPSPVVNRRSWWGGN-GSSRGQGRRWRSGRGESGTAGGAAHSGVEGEEDEQKEEIRVR--LRRVFVAMYPLLHAAYEGSFFVYQWTYLLGRRKQYSPLLHIAGQVLRRLSQEDVQPPAPSITEKKS------------------LTARLVRSF---KVLLLLGIVAFKLLEWWMSSPDFLQSPRQKRIVPPV------PDPPAPAPTGVPLPKDAVLCPLCLRPRVNPAVTSA-GVVFCYKCLLPEVRKAGVCPVTLQPCREEQVRRIY 421
            ++G     P+FFE+    ++  SL+ A+ + F VLA+R P    +LD+ DE FA++ + LE H L   +A FSESLYG +R   +  +G        ++A ++++   +G  +H K+         L+++  ++ PY K+KL ++Y   +D +L   +     W  G+ G     G    S RGE+       H   E  ++++    RV+  ++R+  A YP +HA  EG  F YQ  YLL     YSP LHI    + R + +++   +  +++ +                   L + L R+    +  L+  +  FK++EWW       QS  ++   P V      P PP  A  G+PLP D  LCPLC   R NPAV +A G VFCY C+   V +   CPVTL P   +Q+RR++
Sbjct:    4 QVGGHGKRPTFFEMAATQQLPPSLRAALTYSFGVLAQRRPFFHKVLDYDDEFFAMLMIVLETHSLRTTEASFSESLYGLRRRSAKLSQG--------KEAPHTDSVEHSGIEKHQKI---------LSVVFLVVLPYFKSKLHSVYRAQRDAMLQDTL-----WGAGDVGMDESDG---FSERGEN------LHIPAELTDNDRSRSARVKNLVKRIISACYPWIHATNEGLSFAYQLLYLLDATSFYSPALHILTVNVCRATGQELMDASSKVSKNRMRERERLWGPAWLKAVQGVLLSSLYRTLDYAQTGLIAAVFFFKMMEWW------YQSAEERMTAPTVYPPPPPPPPPKVAEEGIPLPPDRTLCPLCTSKRTNPAVVAASGFVFCYSCIFKYVSRYKRCPVTLMPVNVDQIRRLF 388          
BLAST of EWM24718.1 vs. NCBI_GenBank
Match: gi|971509289|dbj|GAQ88910.1| (peroxin 12 [Klebsormidium nitens])

HSP 1 Score: 175.252 bits (443), Expect = 6.095e-47
Identity = 140/427 (32.79%), Postives = 204/427 (47.78%), Query Frame = 0
Query:   31 EMGTDPHYPSFFEVFMQDRIHQSLKPAVRHVFLVLAERWPQAVVLLDHLDEVFAIMSLFLERHYLAKNDALFSESLYGFKRSRYRSQEGTGPRNEQHRKADNSNTSNVTGQSEHMKMSALTQGDRRLALLVTILAPYAKAKLDALYIHYKDTLLPSPVVNRRSWWGGNGSSRGQGRRWRSGRGESGTAGGAA--HSGVEGEED---EQKEEIRVRLRRVFVAMYPLLHAAYEGSFFVYQWTYLLGRRKQYSPLLHIAGQVLRRLSQEDVQPPAPSITE-KKSLTARL--------------------VRSFKVLLLLGIVAFKLLEWWMSSPDFLQSPRQKRIVPPV-------PDPPAPAPTGVPLPKDAVLCPLCLRPRVNPAVTS-AGVVFCYKCLLPEVRKAGVCPVTLQPCREEQVRRIYLT 423
            ++G D   P+FFE+   + +  SL+ A+++   VLA+R P    +LDH DE FA++ L LE H L   DA F+E+LYG +R+  R Q    P  +Q R A  S              S L +  R L+LL  +  PY + K  A Y   +   L S +     W GG   + G    + +G G +    G     S +E  E    E  +  RVRL +     YPL+H + EG  F YQ  YLL   + YSP+L  AG V+RR + +++   A    E ++    RL                    + S +  L++ +  FK+LEWW +S +       +R+  P        P  P  A  G+ LP+D  LCPLC RPR NPA+ + +G VFCY C+   V +   CPVTL P   + +RR+YL+
Sbjct:    4 QVGGDGSRPTFFEMSATEHLPLSLRTAMQYSLAVLAQRQPALHKVLDHADEAFAVLMLALEYHSLRTQDASFAEALYGLRRTPARVQ--ALPPGQQ-RNAPPS--------------SGLGRKQRLLSLLFLVGLPYLRTKFRAAYSADRRGTLQSGI-----WQGGEADANG----FANGDGSTDALLGEDPFDSEIEASETATLETWQGWRVRLGKAMARAYPLIHTSVEGLCFGYQLMYLLDVTRYYSPMLRGAGVVVRRSTGQELLAAAKRSEELRRGEFGRLRGPAVLQWLQRFVFRTGYTFLDSLRNGLIVSVFLFKMLEWWYTSAE-------QRVNTPTILPPPPAPPAPKAAEGGISLPRDKHLCPLCQRPRTNPAMAAFSGFVFCYPCIFQYVNQYERCPVTLMPMEVDNIRRLYLS 397          
BLAST of EWM24718.1 vs. NCBI_GenBank
Match: gi|697139661|ref|XP_009623923.1| (PREDICTED: peroxisome biogenesis protein 12 [Nicotiana tomentosiformis] >gi|1025148204|ref|XP_016467580.1| PREDICTED: peroxisome biogenesis protein 12-like [Nicotiana tabacum] >gi|1083900773|ref|XP_018632803.1| PREDICTED: peroxisome biogenesis protein 12 [Nicotiana tomentosiformis])

HSP 1 Score: 173.711 bits (439), Expect = 1.928e-46
Identity = 129/417 (30.94%), Postives = 203/417 (48.68%), Query Frame = 0
Query:   31 EMGTDPHYPSFFEVFMQDRIHQSLKPAVRHVFLVLAERWPQAVVLLDHLDEVFAIMSLFLERHYLAKNDALFSESLYGFKRSRYRSQEGTGPRNEQHRKADNSNTSNVTGQSEHMKMSALTQGDRRLALLVTILAPYAKAKLDALYIHYKDTLLPSPVVNRRSWWGGNGSSRGQGRRWRSGRGESGTAGGAAHSGVEGEEDEQKEEIRVRLRR----VFVAMYPLLHAAYEGSFFVYQWTYLLGRRKQYSPLLHIAGQVLRRLSQEDVQPPAPSITEKKSLTARLVR---------------SFKVL------LLLGIVAFKLLEWWMSSPDFLQSPRQKRIVPPVPDPPAPAPTGVPLPKDAVLCPLCLRPRVNPAVTS-AGVVFCYKCLLPEVRKAGVCPVTLQPCREEQVRRIY 421
            ++G     P+FFE+    ++  SL+ A+ +   VLA R P    +LD+ DE FA++ L LE H L   D  F+ESLYG +R   + +           K DN   S+V    E +  + L +  + L+++  ++ PY ++KL ++Y   ++ +L + +      WG       +G R+    G++    GA +S V     + +E +R RLR+    +  A YP +HA  EG  F YQ  YLL     YS  LH  G  + R + +++   +  I++ +S     +R               ++ VL      L+  +  FK++EWW  S +   S       PP P PP  A  G+PLP D  LCPLC + R NP+V S +G VFCY C+   V +   CPVTL P   +Q+RR++
Sbjct:    4 QVGGQGTRPTFFEMAAAQQLPSSLRAALTYSLGVLALRRPFIHKILDYEDECFALLMLVLETHSLRTTDGSFAESLYGLRRRAVKIKV----------KGDNKG-SDV---GEEINHTGLEKRQKVLSVVFLVILPYLRSKLHSIYNKEREVVLQATL------WGH------EGERF----GDTDYFDGAGNSIVSTSSSDAEESVRDRLRKKIRKIVAAFYPWIHAGNEGFSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQELMDTSSRISKIRSRERERLRGPPWLKAVQSGLLSCAYGVLDYAQTGLIAAVFFFKMMEWWYQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPSDRTLCPLCSQKRANPSVVSVSGFVFCYSCIFRYVSQYKRCPVTLMPATVDQIRRLF 390          
BLAST of EWM24718.1 vs. NCBI_GenBank
Match: gi|1026774216|gb|OAE33342.1| (hypothetical protein AXG93_4123s1170 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 173.326 bits (438), Expect = 3.643e-46
Identity = 129/429 (30.07%), Postives = 202/429 (47.09%), Query Frame = 0
Query:   31 EMGTDPHYPSFFEVFMQDRIHQSLKPAVRHVFLVLAERWPQAVVLLDHLDEVFAIMSLFLERHYLAKNDALFSESLYGFKRSRYRSQEGTGPRNEQHRKADNSNTSNVTGQSEHMKMSALTQGDRRLALLVTILAPYAKAKLDALYIHYKDTLLPSPVVNRRSWWGGNGSSRGQGRRWRSGRGESGTAGGAAHSGVEGEEDEQKEEIRVRLRRVFVAMYPLLHAAYE----------GSFFVYQWTYLLGRRKQYSPLLHIAGQVLRRLSQEDVQPPAPSITEKKSLTARLVRSFKVL---------------------LLLGIVAFKLLEWWMSSPDFLQSPRQKRIVPPV------PDPPAPAPTGVPLPKDAVLCPLCLRPRVNPA-VTSAGVVFCYKCLLPEVRKAGVCPVTLQPCREEQVRRIY 421
            ++G +   P+FFE+     +  SL+ A+ +   V+A+R P    +LD+ DE FA++ LFLE H L  +DA F+E+LYG +R       GT               SN    SE  ++ A+++  R L++L  +  PY K+K++A Y   +   L +      ++W   G+    G    S   +S +         +G E    + I+ R+ ++ V MYP LHA++E          G  F YQ  YLL   + Y+P LH+ G  + R S +++   +  I E+++     +R  ++L                     L+  +  FK++EWW       QS  Q+   P V      P PP  A  G+PLP D   CPLCL  R NPA V  +G VFCY C+   V +   CP+TL    E+++RR+Y
Sbjct:    4 QVGGEGVRPTFFEMAAAQHLPASLRAALLYSLGVMAQRRPILHKVLDYSDEAFAVLMLFLEAHSLRISDASFAEALYGLRRRSAMPTTGT------------EIISNNRSSSEPSRLGAISRRQRSLSVLFLVGMPYLKSKMEAAYNAQRGGALQA------AFW---GTGDVDGVEVESINDDSPS----NRDERQGSEATVTQRIKSRISKLCVQMYPWLHASHEVVVGQLMFQTGLAFAYQLLYLLDATQFYTPGLHLLGIQVSRASGQELMDASKQIVERRNREFERLRGPRILQTVQRGLLRTAYGFLDYAQSGLIASVFIFKMVEWW------YQSAEQRLTSPTVYPPPPPPPPPKVAKDGIPLPGDRTCCPLCLEKRTNPAMVAVSGYVFCYPCIYNYVNEYKRCPITLASASEDKIRRLY 401          
BLAST of EWM24718.1 vs. NCBI_GenBank
Match: gi|1201299726|gb|OVA02331.1| (Pex [Macleaya cordata])

HSP 1 Score: 170.244 bits (430), Expect = 3.969e-45
Identity = 127/413 (30.75%), Postives = 198/413 (47.94%), Query Frame = 0
Query:   31 EMGTDPHYPSFFEVFMQDRIHQSLKPAVRHVFLVLAERWPQAVVLLDHLDEVFAIMSLFLERHYLAKNDALFSESLYGFKRSRYRSQEGTGPRNEQHRKADNSNTSNVTGQSEHMKMSALTQGDRRLALLVTILAPYAKAKLDALYIHYKDTLLPSPVVNRRSWWGGNGSSRGQGRRWRSGRGESGTAGGAAHSGVEGEEDEQKEEIRVRLRRVFVAMYPLLHAAYEGSFFVYQWTYLLGRRKQYSPLLHIAGQVLRRLSQEDVQPPAPSITEKKSLTARLVRS-------FKVLL--------------LLGIVAFKLLEWWMSSPDFLQSPRQKRIVPPVPDPPAPAPTGVPLPKDAVLCPLCLRPRVNPAVTS-AGVVFCYKCLLPEVRKAGVCPVTLQPCREEQVRRIY 421
            ++G     P+FFE+    ++  SL+ A+ +   V A R P    +LD+ DE FA++ + LE H L   DA FSESLYG +R   R+      +++ H   D+S+    +G  +H          R L++   ++ PY K+KL ++Y   ++  L +      S WG   +       + SG   +G +           E  Q+  IR R+  +  A YP +HA+ EG  F YQ  YLL     YSP LH+ G  + R + +++   +  I++ +S     +R         KVLL              +  +  FK++EWW  S +   S       PP P PP  A  G+PLP D  +CPLC + RVNP+V + +G VFCY C+   V +   CP+TL P   +Q+RR++
Sbjct:    4 QVGGQGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRPFLHKVLDYDDEFFALLMMVLETHSLRTTDASFSESLYGLRR---RAVNVKLSKDKPH--MDSSDGRRHSGLEKH---------QRVLSVAFLVVLPYFKSKLHSIYNREREATLQA------SLWGPGEARFDDVDYFESGETSTGVSS----------EATQRSSIRKRIEAILGACYPWVHASSEGLSFAYQLLYLLDATGFYSPALHVLGVHVCRATGQELMDTSSRISKIRSHERERLRGPPWLKALQKVLLSCIYTTLDYAQTGLIAAVFFFKMMEWWYQSAEERMSAPTVYPPPPPPPPPKVAEEGIPLPPDRTICPLCSQKRVNPSVVAVSGFVFCYPCIFRYVSQYKRCPITLMPTNVDQIRRLF 386          
BLAST of EWM24718.1 vs. NCBI_GenBank
Match: gi|698452939|ref|XP_009779830.1| (PREDICTED: peroxisome biogenesis protein 12 [Nicotiana sylvestris])

HSP 1 Score: 169.859 bits (429), Expect = 6.880e-45
Identity = 127/417 (30.46%), Postives = 198/417 (47.48%), Query Frame = 0
Query:   31 EMGTDPHYPSFFEVFMQDRIHQSLKPAVRHVFLVLAERWPQAVVLLDHLDEVFAIMSLFLERHYLAKNDALFSESLYGFKRSRYRSQEGTGPRNEQHRKADNSNTSNVTGQSEHMKMSALTQGDRRLALLVTILAPYAKAKLDALYIHYKDTLLPSPVVNRRSWWGGNGSSRGQGRRWRSGRGESGTAGGAAHSGVEGEEDEQKEEIRVRLRR----VFVAMYPLLHAAYEGSFFVYQWTYLLGRRKQYSPLLHIAGQVLRRLSQEDVQPPAPSITEKKSLTARLVR---------------SFKVL------LLLGIVAFKLLEWWMSSPDFLQSPRQKRIVPPVPDPPAPAPTGVPLPKDAVLCPLCLRPRVNPAVTS-AGVVFCYKCLLPEVRKAGVCPVTLQPCREEQVRRIY 421
            ++G     P+FFE+    ++  SL+ A+ +   VLA R P    +LD+ DE FA++ L LE H L   D  F+ESLYG +R   + +           K DN          E +  + L +  + L+++  ++ PY ++KL ++Y   ++  L + +      WG       +  R+    G++    GA +S V     + +E +R RLR+    +  A YP +HA  EG  F YQ  YLL     YS  LH  G  + R + +++   +  I++ +S     +R               ++ VL      L+  +  FK++EWW  S +   S       PP P PP  A  G+PLP D  LCPLC + R NP+V S +G VFCY C+   V +   CPVTL P   +Q+RRI+
Sbjct:    4 QVGGQGTRPTFFEMAAAQQLPSSLRAALTYSLGVLALRRPLIHKILDYEDECFALLMLVLETHSLRTTDGSFAESLYGLRRRAVKIKV----------KGDNKGPD----VREEINHTGLEKRQKVLSVVFLVILPYLRSKLHSIYNKEREVALQATL------WGH------EDERF----GDTDYFDGAGNSTVSMSSSDAEESVRDRLRKKIRKIVAACYPWIHAGNEGFSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQELMDTSSRISKIRSHERERLRGPPWLKAVQSGLLSCAYGVLDYAQTGLIAAVFFFKMMEWWYQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPSDRTLCPLCSQKRANPSVVSVSGFVFCYSCIFRYVSQYKRCPVTLMPANVDQIRRIF 390          
BLAST of EWM24718.1 vs. NCBI_GenBank
Match: gi|1109261738|ref|XP_019154958.1| (PREDICTED: peroxisome biogenesis protein 12 [Ipomoea nil] >gi|1109261740|ref|XP_019154959.1| PREDICTED: peroxisome biogenesis protein 12 [Ipomoea nil] >gi|1109261742|ref|XP_019154960.1| PREDICTED: peroxisome biogenesis protein 12 [Ipomoea nil])

HSP 1 Score: 169.088 bits (427), Expect = 1.135e-44
Identity = 125/413 (30.27%), Postives = 192/413 (46.49%), Query Frame = 0
Query:   31 EMGTDPHYPSFFEVFMQDRIHQSLKPAVRHVFLVLAERWPQAVVLLDHLDEVFAIMSLFLERHYLAKNDALFSESLYGFKRSRYRSQEGTGPRNEQHRKADNSNTSNVTGQSEHMKMSALTQGDRRLALLVTILAPYAKAKLDALYIHYKDTLLPSPVVNRRSWWGGNGSSRGQGRRWRSGRGESGTAGGAAHSGVEGEEDEQKEEIRVRLRRVFVAMYPLLHAAYEGSFFVYQWTYLLGRRKQYSPLLHIAGQVLRRLSQEDVQPPAPSITE---------------KKSLTARLVRSFKVL------LLLGIVAFKLLEWWMSSPDFLQSPRQKRIVPPVPDPPAPAPTGVPLPKDAVLCPLCLRPRVNPAVTS-AGVVFCYKCLLPEVRKAGVCPVTLQPCREEQVRRIY 421
            ++G     P+FFE+    ++  SL+ A+ +   VLA R      +LD  DE FA++ L LE H L  +DA F+ESLYG +R   + +     +N+  R         V   +E +  S L +  + L++   ++ PY ++KL A++   ++  L +      S WG  G  R       SG      A     +     E   +E ++ R+++V  A YP +HA  EG  F YQ  YLL     YS  LH  G  + R + +++   +  I++               KK     L  ++ VL      L+  +  FK++EWW  S +   S       P  P  P  A  G+PLP D  LCPLC + R NP+V S +G VFCY C+   V +   CPVTL P   +Q+RR++
Sbjct:    4 QVGGQGTRPTFFEMAAAQQLPSSLRAALSYSLGVLAMRRSFLHKILDFEDEFFALLMLVLETHSLRTSDASFAESLYGLRRRALKIR----VKNDNKR---------VLESNEEIHHSGLEKRQKILSVAFLVILPYLRSKLHAIFNKEREVALQA------SLWG-EGDERFNADYLDSG------ANSIVSTSSSDTEGSARERLKKRIQKVMAACYPWIHAGNEGLSFSYQLLYLLDATGFYSFGLHALGIHVCRATGQELMDTSSRISKIRKHERERLRGPPWLKKVQGGLLSCAYAVLDYAQTGLIAAVFFFKMMEWWYQSAEERMSAPTIYPPPLPPPAPKVAKDGIPLPPDRTLCPLCSQKRANPSVVSVSGFVFCYSCIFKYVSQYKRCPVTLMPATVDQIRRLF 390          
The following BLAST results are available for this feature:
BLAST of EWM24718.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106252|gb|EWM24718.1|0.000e+0100.00zinc-binding integral peroxisomal membrane protein... [more]
gi|1026959337|ref|XP_016611266.1|2.019e-5035.11hypothetical protein SPPG_02281 [Spizellomyces pun... [more]
gi|1183371863|gb|ORX97663.1|2.427e-4933.33hypothetical protein K493DRAFT_300330 [Basidiobolu... [more]
gi|586775422|ref|XP_006857493.1|7.304e-4830.57peroxisome biogenesis protein 12 [Amborella tricho... [more]
gi|971509289|dbj|GAQ88910.1|6.095e-4732.79peroxin 12 [Klebsormidium nitens][more]
gi|697139661|ref|XP_009623923.1|1.928e-4630.94PREDICTED: peroxisome biogenesis protein 12 [Nicot... [more]
gi|1026774216|gb|OAE33342.1|3.643e-4630.07hypothetical protein AXG93_4123s1170 [Marchantia p... [more]
gi|1201299726|gb|OVA02331.1|3.969e-4530.75Pex [Macleaya cordata][more]
gi|698452939|ref|XP_009779830.1|6.880e-4530.46PREDICTED: peroxisome biogenesis protein 12 [Nicot... [more]
gi|1109261738|ref|XP_019154958.1|1.135e-4430.27PREDICTED: peroxisome biogenesis protein 12 [Ipomo... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5970rna5970Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications