EWM24723.1, cds5951 (CDS) Nannochloropsis gaditana

Overview
NameEWM24723.1
Unique Namecds5951
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:226637..226643 +
Alignment locationCM002467.1:227016..227257 +
Alignment locationCM002467.1:227477..230350 +
Alignment locationCM002467.1:231151..231669 +
Alignment locationCM002467.1:231717..231842 +
Alignment locationCM002467.1:233004..233406 +
Alignment locationCM002467.1:233900..233928 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24723.1
Productmyb family transcription factor
Orig transcript idgnl|cribi|Naga_100180g7.4036.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:226637..226643 +
CM002467.1supercontigCM002467.1:227016..227257 +
CM002467.1supercontigCM002467.1:227477..230350 +
CM002467.1supercontigCM002467.1:231151..231669 +
CM002467.1supercontigCM002467.1:231717..231842 +
CM002467.1supercontigCM002467.1:233004..233406 +
CM002467.1supercontigCM002467.1:233900..233928 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017930Myb_dom
IPR009057Homeodomain-like
IPR002921Fungal_lipase-like
IPR029058AB_hydrolase
IPR001005SANT/Myb
Homology
BLAST of EWM24723.1 vs. NCBI_GenBank
Match: gi|585106258|gb|EWM24723.1| (myb family transcription factor [Nannochloropsis gaditana])

HSP 1 Score: 2839.68 bits (7360), Expect = 0.000e+0
Identity = 1399/1399 (100.00%), Postives = 1399/1399 (100.00%), Query Frame = 0
Query:    1 MNGQRKHVGSLFFCPWTTLKGGFYLLHVAWWTNDRCSCRRSTATLPRNDLGPKFVRTLTKKAHNTLHDVYSVKTKMWQMTWWQGSKRKPMPSGNGTPKRYLPTESSLEDNREAMDYRKLGYQGSSGGGSSPGRNGDVLAHGERGRSRASDPGCPQHQDHATAPVSPLLDKAAVVVRNNATALESLSARGIWLLLFLPYLTLALALLIDAHPQYRFTSGYAFPTGETVGPCHGEDHIHDGCVRVVNANYTALYSPPFRLPLRSTILAVDALVNARAPLTPFEGRVEPTPARERLLTTPTPVPLLSVAPPSPTLSASTPSSFPRPSSRPRFPLELTEETDDDDSSEGGELSVTAKLEVPFQDGSGWRLLCQGPSVGWTWGEEGAEGGRRKGRRRRLAAHERRERALARAPSRQLEDLPGFPPSSTSFAARLLTVVFDAPGMEYRGFPSYRLSIVVAGPAAVSFAPQLGYLIHHDRFSYLYLLFLLRAALLLLTLLGLFRWHRRLRREKPGGLRTWLPEQHYVGLVLLPALFLWQNPFALLLGYWGRPPSLLLFLADLANAAGYLTMLFAWVCIVDGLRCYETSKEVWRRALALSPPTRSLPPNHLALHTASFPSPSDAHNPWQHQQSFAQPHPSPIPAPPSLRPSSSSALPWPPKHHPLGDYFSDFFLPKLALYLFSLCLTLFLCVLRYPSKFFQSRPPLSSSTTSSPASVGINTEDSGLPPSLRRVYALLSFLLVLLLAGWYLLFLSSVLLTGRALRRQAYLRTRSQQLSFRFISQQVFLILCCKLTLLVLGTLRLARLLFGVGAGGGGGKSWEGALSGWSLYATSSFQAPMGELLFISITAYLMAFIFSPATRWSGSDVGGGGYPHVSLEAELPPSLPPSLPPSSSFQSLRSKLLPSPKPIFCLETACWLMEASWQAYYELDARSLPSSPSPSSPSSLPASSPSSTSSLPGRMALGNLNVRMEGYVHDEGTDTRSVLGRVGGNEGGGGGGRGRGRGGGCGRKGALLLAFRGTLSSRNMLTDLKMQQVAFPSDRVLRVVEEGLLSAVESALAREGTEYLYCTGHSLGGALAQLAAYDLSINFPALRHIQVYTLGAPRVGNPAFSSAYEARVPATFRVVVDGDLVPGMPKIFGMYRHSGVEVLVDAENGGNLIVSPSAVEKWLRLRNRTSTTNHSLTTYRDCMEACFSPDDLVHYLPKVLGQENRTSADEDLPEWLRTKNGLIHHAFALYMRRVHISMVRFNWLHTSREIFVGKHNKKASVFHAVKHLPGPLMGLAMEDDGKRNTWTADEDKILASLVEKYGPKKWGIVATYLPMRNAKQCHQRWHYVLKPSISRETWTEKEDYIIYHYQRLLGNKWSHIAKYLSGRTGYAVRNRHAFLVKHYKGGKVPVPPASSRRTFRV 1399
            MNGQRKHVGSLFFCPWTTLKGGFYLLHVAWWTNDRCSCRRSTATLPRNDLGPKFVRTLTKKAHNTLHDVYSVKTKMWQMTWWQGSKRKPMPSGNGTPKRYLPTESSLEDNREAMDYRKLGYQGSSGGGSSPGRNGDVLAHGERGRSRASDPGCPQHQDHATAPVSPLLDKAAVVVRNNATALESLSARGIWLLLFLPYLTLALALLIDAHPQYRFTSGYAFPTGETVGPCHGEDHIHDGCVRVVNANYTALYSPPFRLPLRSTILAVDALVNARAPLTPFEGRVEPTPARERLLTTPTPVPLLSVAPPSPTLSASTPSSFPRPSSRPRFPLELTEETDDDDSSEGGELSVTAKLEVPFQDGSGWRLLCQGPSVGWTWGEEGAEGGRRKGRRRRLAAHERRERALARAPSRQLEDLPGFPPSSTSFAARLLTVVFDAPGMEYRGFPSYRLSIVVAGPAAVSFAPQLGYLIHHDRFSYLYLLFLLRAALLLLTLLGLFRWHRRLRREKPGGLRTWLPEQHYVGLVLLPALFLWQNPFALLLGYWGRPPSLLLFLADLANAAGYLTMLFAWVCIVDGLRCYETSKEVWRRALALSPPTRSLPPNHLALHTASFPSPSDAHNPWQHQQSFAQPHPSPIPAPPSLRPSSSSALPWPPKHHPLGDYFSDFFLPKLALYLFSLCLTLFLCVLRYPSKFFQSRPPLSSSTTSSPASVGINTEDSGLPPSLRRVYALLSFLLVLLLAGWYLLFLSSVLLTGRALRRQAYLRTRSQQLSFRFISQQVFLILCCKLTLLVLGTLRLARLLFGVGAGGGGGKSWEGALSGWSLYATSSFQAPMGELLFISITAYLMAFIFSPATRWSGSDVGGGGYPHVSLEAELPPSLPPSLPPSSSFQSLRSKLLPSPKPIFCLETACWLMEASWQAYYELDARSLPSSPSPSSPSSLPASSPSSTSSLPGRMALGNLNVRMEGYVHDEGTDTRSVLGRVGGNEGGGGGGRGRGRGGGCGRKGALLLAFRGTLSSRNMLTDLKMQQVAFPSDRVLRVVEEGLLSAVESALAREGTEYLYCTGHSLGGALAQLAAYDLSINFPALRHIQVYTLGAPRVGNPAFSSAYEARVPATFRVVVDGDLVPGMPKIFGMYRHSGVEVLVDAENGGNLIVSPSAVEKWLRLRNRTSTTNHSLTTYRDCMEACFSPDDLVHYLPKVLGQENRTSADEDLPEWLRTKNGLIHHAFALYMRRVHISMVRFNWLHTSREIFVGKHNKKASVFHAVKHLPGPLMGLAMEDDGKRNTWTADEDKILASLVEKYGPKKWGIVATYLPMRNAKQCHQRWHYVLKPSISRETWTEKEDYIIYHYQRLLGNKWSHIAKYLSGRTGYAVRNRHAFLVKHYKGGKVPVPPASSRRTFRV
Sbjct:    1 MNGQRKHVGSLFFCPWTTLKGGFYLLHVAWWTNDRCSCRRSTATLPRNDLGPKFVRTLTKKAHNTLHDVYSVKTKMWQMTWWQGSKRKPMPSGNGTPKRYLPTESSLEDNREAMDYRKLGYQGSSGGGSSPGRNGDVLAHGERGRSRASDPGCPQHQDHATAPVSPLLDKAAVVVRNNATALESLSARGIWLLLFLPYLTLALALLIDAHPQYRFTSGYAFPTGETVGPCHGEDHIHDGCVRVVNANYTALYSPPFRLPLRSTILAVDALVNARAPLTPFEGRVEPTPARERLLTTPTPVPLLSVAPPSPTLSASTPSSFPRPSSRPRFPLELTEETDDDDSSEGGELSVTAKLEVPFQDGSGWRLLCQGPSVGWTWGEEGAEGGRRKGRRRRLAAHERRERALARAPSRQLEDLPGFPPSSTSFAARLLTVVFDAPGMEYRGFPSYRLSIVVAGPAAVSFAPQLGYLIHHDRFSYLYLLFLLRAALLLLTLLGLFRWHRRLRREKPGGLRTWLPEQHYVGLVLLPALFLWQNPFALLLGYWGRPPSLLLFLADLANAAGYLTMLFAWVCIVDGLRCYETSKEVWRRALALSPPTRSLPPNHLALHTASFPSPSDAHNPWQHQQSFAQPHPSPIPAPPSLRPSSSSALPWPPKHHPLGDYFSDFFLPKLALYLFSLCLTLFLCVLRYPSKFFQSRPPLSSSTTSSPASVGINTEDSGLPPSLRRVYALLSFLLVLLLAGWYLLFLSSVLLTGRALRRQAYLRTRSQQLSFRFISQQVFLILCCKLTLLVLGTLRLARLLFGVGAGGGGGKSWEGALSGWSLYATSSFQAPMGELLFISITAYLMAFIFSPATRWSGSDVGGGGYPHVSLEAELPPSLPPSLPPSSSFQSLRSKLLPSPKPIFCLETACWLMEASWQAYYELDARSLPSSPSPSSPSSLPASSPSSTSSLPGRMALGNLNVRMEGYVHDEGTDTRSVLGRVGGNEGGGGGGRGRGRGGGCGRKGALLLAFRGTLSSRNMLTDLKMQQVAFPSDRVLRVVEEGLLSAVESALAREGTEYLYCTGHSLGGALAQLAAYDLSINFPALRHIQVYTLGAPRVGNPAFSSAYEARVPATFRVVVDGDLVPGMPKIFGMYRHSGVEVLVDAENGGNLIVSPSAVEKWLRLRNRTSTTNHSLTTYRDCMEACFSPDDLVHYLPKVLGQENRTSADEDLPEWLRTKNGLIHHAFALYMRRVHISMVRFNWLHTSREIFVGKHNKKASVFHAVKHLPGPLMGLAMEDDGKRNTWTADEDKILASLVEKYGPKKWGIVATYLPMRNAKQCHQRWHYVLKPSISRETWTEKEDYIIYHYQRLLGNKWSHIAKYLSGRTGYAVRNRHAFLVKHYKGGKVPVPPASSRRTFRV 1399          
BLAST of EWM24723.1 vs. NCBI_GenBank
Match: gi|553187187|ref|XP_005854561.1| (lipase domain protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294499|gb|EKU21799.1| lipase domain protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 299.286 bits (765), Expect = 1.448e-90
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0
Query: 1071 QLAAYDLSINFPALRHIQVYTLGAPRVGNPAFSSAYEARVPATFRVVVDGDLVPGMPKIFGMYRHSGVEVLVDAENGGNLIVSPSAVEKWLRLRNRTSTTNHSLTTYRDCMEACFSPDDLVHYLPKVLGQENRTSADEDLPEWL 1214
            QLAAYDLSINFPALRHIQVYTLGAPRVGNPAFSSAYEARVPATFRVVVDGDLVPGMPKIFGMYRHSGVEVLVDAENGG+LIVSPSAVEKWLRLRNRTSTTNHSLTTYRDCMEACFSPDDLVHYLPKVLGQENRTSADEDLPEWL
Sbjct:    1 QLAAYDLSINFPALRHIQVYTLGAPRVGNPAFSSAYEARVPATFRVVVDGDLVPGMPKIFGMYRHSGVEVLVDAENGGDLIVSPSAVEKWLRLRNRTSTTNHSLTTYRDCMEACFSPDDLVHYLPKVLGQENRTSADEDLPEWL 144          
BLAST of EWM24723.1 vs. NCBI_GenBank
Match: gi|695381914|ref|XP_009517237.1| (hypothetical protein PHYSODRAFT_349422 [Phytophthora sojae] >gi|348690148|gb|EGZ29962.1| hypothetical protein PHYSODRAFT_349422 [Phytophthora sojae])

HSP 1 Score: 182.57 bits (462), Expect = 3.832e-43
Identity = 152/540 (28.15%), Postives = 229/540 (42.41%), Query Frame = 0
Query:  665 FLPKLALYLFSLCLTLFLCVLRYPSKFFQSRPPLSSSTTSSPASVGINTEDSGLPPSLRRVYALLSFLLVLLLAGWYLLFLSSVLLTGRALRRQAYLRTRSQQLSFRFISQQVFLILCCKLTLLVLGTLRLARLLFGVGAGGGGGKSWEGALSGWSLYATSSFQAPMGELLFISITAYLMAFIFSPATRWSGSDVGGGGYPHVSLEAELPPSLPPSLPPSSSFQSLRSKLLPSPKPIFCLETACWLMEASWQAYYELDARSLPSSPSPSSPSSLPASSPSSTSSLPGRMALGNLNVRMEGYVHDEGTDTRSVLGRVGGNEGG------GGGGRGRGRGGGCGRKGALLLAFRGTLSSRNMLTDLKMQQVAFPS-DRVLRVVEEGLLSAVESA--LAREGTEYL---------YCTGHSLGGALAQLAAYDLSINFPALRHIQVYTLGAPRVGNPAFSSAYEARVPATFRVVVDGDLVPGMPKIFGMYRHSGVEVLVDAENGGNLIVSPSAVEKWLRLRNRTSTTNHSLTTYRDCMEACFS 1186
            F PKL   L    +   + +LR P  FF                 G     S      + +Y LL F+   L+  W +  ++    +GR L+   Y+ TR +QLS+RF+  +  LI      L  +    L ++ + VG       +        +     +    +G+ LF+S+  YL+ F+  P     G+    G     +   +  P +      S  F +  S L       FC+ET+ WL+E ++QAY++      P  PSPS                 G + L      +  ++    TDT +V+     +         G   +   R      +  L +  RG    R+ L  +K      P  +  L  V  G   A ES     +E T  +         Y TGHS+GGALA LAAYDL++NF     + +Y  G PRVGNP+F   Y++ VP ++RVV+DGD+VPG PK +G+Y+H G E+ +D    GNLIV PS VE+ L   +R  TT H    YR  +  C  
Sbjct:  442 FAPKLMFGLVLFAVDTGMTMLRMPKLFF-----------------GAEVASSTYDFHHQELYVLLGFIRTGLILAWLVWIMAVGARSGRHLKALPYMATRFKQLSYRFLVLETLLIFVYVFVLSAVQIFYLTKMWYFVGYDAFIQDAVH------TFVKMHTGHPSLGKFLFLSVYVYLVMFVHLPPLAGDGT----GLLASTAFNVDEKPRVD-----SYGFLTPESNL-------FCVETSGWLLELAYQAYFDP-----PGCPSPSGY---------------GELTLERYGFELITHLRSNLTDTHAVVAWSQDDHRRLVISFRGTTSKENWRSNLRADQHVLWIKSRGLRWRRSCLEKVKDVAAKIPLLNMALPRVHRGFWIAYESVRDQLKEVTRLILDENPGVSVYITGHSMGGALAVLAAYDLAVNFSI--KVNMYNFGGPRVGNPSFRQHYDSCVPTSYRVVMDGDIVPGWPKFWGLYQHIGTEISLDV--AGNLIVDPSFVERHLHHSSRRKTTMHGTNVYRVSIAKCLE 918          
BLAST of EWM24723.1 vs. NCBI_GenBank
Match: gi|325183183|emb|CCA17641.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 176.022 bits (445), Expect = 3.957e-41
Identity = 148/526 (28.14%), Postives = 225/526 (42.78%), Query Frame = 0
Query:  702 TTSSPASVGINTEDSGLPPSLRRVYALLSFLLVLLLAGWYLLFLSSVLLTGRALRRQAYLRTRSQQLSFRFISQQVFLILCCKLTLLVLGTLRLARLLFGVGAGGGGGKSWEGALSGWSLYATSSFQAPMGELLFISITAYLMAFIFSPATRWSGSDVGGGGYPHVSLEAELPPSLPPSLPPSSSFQSLRSKLLPSPKPIFCLETACWLMEASWQAYYELDARSLPSSPSPSSPSSLPASSPSSTSSLPGRMALGNLNVRMEGYVHDEGTDTRSVLGRVGGNEGGGGGGRGRGRGGGCGRKGALLLAFRGTLSSRNMLTDLKMQQVAF------------PSDRVLRV-------------VEEGLLSA---VESALAREGTEYL--------YCTGHSLGGALAQLAAYDLSINFPALRHIQVYTLGAPRVGNPAFSSAYEARVPATFRVVVDGDLVPGMPKIFGMYRHSGVEVLVDAENGGNLIVSPSAVEKWLRLRNRTSTTNHSLTTYRDCMEACFSPDDLV 1191
            TT+S  + GI  +++         + +L F  + +L  W    +     +   L+  +Y+ TR QQLS+RF++ +  LIL     + +     L ++ F +G       + E  L           Q  +G+ +F+S+  YL+ ++  P    +   +       +  E +   S   S+  S SF               C+ETA WL+E SWQAY++          SP  PS           S  G + L      +   + +   DT  VL     N                     L++AFRGT S +N  ++L+  Q                  R+ R+             V  G   A   V S L R     L        Y TGHS+GG LA LAAYD +++F     +++Y  G PRVGNP+F+  Y   VP ++RVV+DGD+VPG+PK +G+Y+H G EV +D E  GNLIV PS +EK L++ ++     H    YR  +  CF  D LV
Sbjct:  431 TTTSVHTFGILFQNA---------FVMLEFFRLTMLLYWVFWAVQLSWTSASYLKSLSYMSTRYQQLSYRFLALESILILSYVFVMTIFRCWSLFQIWFLIGYDAFLQNAIENFLR------LDIGQPSLGKFIFLSVYVYLLLYVHLPPICPTNGRMSRAASIQIREEKQFAHS---SIARSQSF---------------CIETAVWLLELSWQAYFD----------SPGQPSE----------SGYGEVNLEPYGFELIAQLRNSAVDTH-VLIAYNAN------------------MNRLVVAFRGTSSRQNWKSNLRFHQTVLWIKSMRANRRDDCKRRLKRILSKIPLFDMALPRVHSGFWRAYMTVRSDLKRVVRLLLDEHPGVSTYVTGHSMGGTLAILAAYDFTVDFAI--AVEMYNFGGPRVGNPSFARDYNRHVPNSYRVVMDGDIVPGVPKFWGLYQHVGTEVALDLE--GNLIVDPSFIEKKLQVGSKHKLATHPSRVYRSALALCF--DKLV 878          
BLAST of EWM24723.1 vs. NCBI_GenBank
Match: gi|635371400|emb|CCI40555.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 174.866 bits (442), Expect = 7.462e-41
Identity = 150/536 (27.99%), Postives = 229/536 (42.72%), Query Frame = 0
Query:  669 LALYLFSLCLTLFLCVLRYPSKFFQSRPPLSSSTTSSPASVGINTEDSGLPPSLRRVYALLSFLLVLLLAGWYLLFLSSVLLTGRALRRQAYLRTRSQQLSFRFISQQVFLILCCKLTLLVLGTLRLARLLFGVGAGGGGGKSWEGALSGWSLYATSSFQAPMGELLFISITAYLMAFIFSPATRWSGSDVGGGGYPHVSLEAELPPSLPPSLPPSSSFQSLRSKLLPSPKPIFCLETACWLMEASWQAYYELDARSLPSSPSPSSPSSLPASSPSSTSSLPGRMALGNLNVRMEGYVHDEGTDTRSVLGRVGGNEGGGGGGRGR-------------GRGGGCGRKGALLLAFRGTLSSRNMLTDLKMQQVAFPSDRVLRVVEEGLLSAVESALAREGTEYLYCTGHSLGGALAQLAAYDLSINFPALRHIQVYTLGAPRVGNPAFSSAYEARVPATFRVVVDGDLVPGMPKIFGMYRHSGVEVLVDAENGGNLIVSPSAVEKWLRLRNRTSTTNHSLTTYRDCMEACFSPDDLV 1191
            ++L++ +LC+ LF                L+SSTT   A   +           + ++ +L F+ + +L  W    +     T   L+   Y+ TR QQLS+RF+  +  LIL   L +       L ++ + +G       + E  L           Q+ +G+ +F+SI  YL+ ++  P              P          +    +   S F SL    +  P   FC+ETA WL+E +WQAY++      P  PS S    +             R A+ + +V     +    T  R V+   G +         R              R  GC R+   +L       S+  L D+ + +V     +    V   L   V   L        Y TGHS+GG LA LAAYD S++F     +++Y  G PRVGNP+F   Y   VP ++RVV+DGD+VPG+PK +G+Y+H G EV +D E  GNLIV PS +EK L++ ++     H    YR  +  CF  D LV
Sbjct:  411 ISLFIITLCMALF---------------GLNSSTTVLQACEIV----------YKTLFVMLGFIRLTMLLYWVFWAVQLSWKTASYLKSVPYMSTRYQQLSYRFLILESILILSYVLVMTTFRYWSLLQVWYLIGYEAFLQNAIETFLE------LDVGQSSLGQFIFLSIYVYLLLYVHLP--------------PSCQQNGTKTRTTSIKIREESQFGSLS---MTRPDS-FCIETALWLLELAWQAYFDS-----PGQPSESGYGEINLEPYGFELIAQLRNAVMDTHV----LIAYNATKNRLVVAFRGTSSRQNWKSNLRFHQTVLWIKSQRANRNDGCRRRLKRIL-------SKIPLFDMALPRVHSGFWQAYMTVRSDLKRVVRLLLYEHPGVSTYVTGHSMGGTLAILAAYDFSVSFDI--AVEMYNFGGPRVGNPSFVRNYNRHVPNSYRVVMDGDIVPGVPKFWGLYQHIGTEVALDLE--GNLIVGPSFIEKKLQVGSKHKLATHPSRVYRSALALCF--DKLV 875          
BLAST of EWM24723.1 vs. NCBI_GenBank
Match: gi|635371402|emb|CCI40557.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 174.481 bits (441), Expect = 9.017e-41
Identity = 150/536 (27.99%), Postives = 229/536 (42.72%), Query Frame = 0
Query:  669 LALYLFSLCLTLFLCVLRYPSKFFQSRPPLSSSTTSSPASVGINTEDSGLPPSLRRVYALLSFLLVLLLAGWYLLFLSSVLLTGRALRRQAYLRTRSQQLSFRFISQQVFLILCCKLTLLVLGTLRLARLLFGVGAGGGGGKSWEGALSGWSLYATSSFQAPMGELLFISITAYLMAFIFSPATRWSGSDVGGGGYPHVSLEAELPPSLPPSLPPSSSFQSLRSKLLPSPKPIFCLETACWLMEASWQAYYELDARSLPSSPSPSSPSSLPASSPSSTSSLPGRMALGNLNVRMEGYVHDEGTDTRSVLGRVGGNEGGGGGGRGR-------------GRGGGCGRKGALLLAFRGTLSSRNMLTDLKMQQVAFPSDRVLRVVEEGLLSAVESALAREGTEYLYCTGHSLGGALAQLAAYDLSINFPALRHIQVYTLGAPRVGNPAFSSAYEARVPATFRVVVDGDLVPGMPKIFGMYRHSGVEVLVDAENGGNLIVSPSAVEKWLRLRNRTSTTNHSLTTYRDCMEACFSPDDLV 1191
            ++L++ +LC+ LF                L+SSTT   A   +           + ++ +L F+ + +L  W    +     T   L+   Y+ TR QQLS+RF+  +  LIL   L +       L ++ + +G       + E  L           Q+ +G+ +F+SI  YL+ ++  P              P          +    +   S F SL    +  P   FC+ETA WL+E +WQAY++      P  PS S    +             R A+ + +V     +    T  R V+   G +         R              R  GC R+   +L       S+  L D+ + +V     +    V   L   V   L        Y TGHS+GG LA LAAYD S++F     +++Y  G PRVGNP+F   Y   VP ++RVV+DGD+VPG+PK +G+Y+H G EV +D E  GNLIV PS +EK L++ ++     H    YR  +  CF  D LV
Sbjct:  401 ISLFIITLCMALF---------------GLNSSTTVLQACEIV----------YKTLFVMLGFIRLTMLLYWVFWAVQLSWKTASYLKSVPYMSTRYQQLSYRFLILESILILSYVLVMTTFRYWSLLQVWYLIGYEAFLQNAIETFLE------LDVGQSSLGQFIFLSIYVYLLLYVHLP--------------PSCQQNGTKTRTTSIKIREESQFGSLS---MTRPDS-FCIETALWLLELAWQAYFDS-----PGQPSESGYGEINLEPYGFELIAQLRNAVMDTHV----LIAYNATKNRLVVAFRGTSSRQNWKSNLRFHQTVLWIKSQRANRNDGCRRRLKRIL-------SKIPLFDMALPRVHSGFWQAYMTVRSDLKRVVRLLLYEHPGVSTYVTGHSMGGTLAILAAYDFSVSFDI--AVEMYNFGGPRVGNPSFVRNYNRHVPNSYRVVMDGDIVPGVPKFWGLYQHIGTEVALDLE--GNLIVGPSFIEKKLQVGSKHKLATHPSRVYRSALALCF--DKLV 865          
BLAST of EWM24723.1 vs. NCBI_GenBank
Match: gi|570938730|gb|ETP03987.1| (hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 172.94 bits (437), Expect = 9.588e-41
Identity = 144/498 (28.92%), Postives = 214/498 (42.97%), Query Frame = 0
Query:  723 RRVYALLSFLLVLLLAGWYLLFLSSVLLTGRALRRQAYLRTRSQQLSFRFISQQVFLILCCKLTLLVLGTLRLARLLFGVGAGGGGGKSWEGALSGWSLYATSSFQAPMGELLFISITAYLMAFIFSPATRWSGSDVGGGGYPHVSLEAELPPSLPPSLPPSSSFQSLRSKLLPSPKPIFCLETACWLMEASWQAYYELDARSLPSSPSPSSPSSLPASSPSSTSSLPGRMALGNLNVRMEGYVHDEGTDTRSVLGRVGGNEGGGGGGRGRGRGGGCGRKGALLLAFRGTLSSRNMLTDLKMQQ-VAFPSDRVLR------------------------VVEEGLLSAVESALA--REGTEYL---------YCTGHSLGGALAQLAAYDLSINFPALRHIQVYTLGAPRVGNPAFSSAYEARVPATFRVVVDGDLVPGMPKIFGMYRHSGVEVLVDAENGGNLIVSPSAVEKWLRLRNRTSTTNHSLTTYRDCMEAC 1184
            + +Y LL F+   L+  W    +     +GR L+   Y+ TR +QLS+RF+  +  LI      L  L    L +  + VG       S        +   T +    +G+ LF+S+  YL+ F+  P      + +      HV  +           P   S+       L     +FC+ETA WL+E ++QAY++                  P   PSS+    G + L      +  ++    TDT  V+             R   R         L+++FRGT S  N  ++L+  Q V +   R LR                         V  G   A ES     +E T  +         Y TGHS+GGALA +AAYDL++NF     + +Y  G PRVGNP+F   Y++ VP ++RVV+DGD+VPG P+ +G+Y+H G E+ +D    GNLIV PS VE+ L   +R  TT H    YR  +  C
Sbjct:  268 KELYVLLGFIRTGLVLFWLTWIMIVGARSGRYLKALPYMATRFKQLSYRFLVLETLLIFVYTFVLSALQIFHLTQTWYFVGYDAFIQDSVH------TFAKTHTGHPSLGKFLFLSVYVYLVMFVHLPPLAGDSTGLLTSTAFHVDEK-----------PRVDSY-----GFLTPDSNLFCVETAGWLLELAYQAYFD------------------PPGCPSSSGY--GELTLERYGFELITHLRSNLTDTHVVVA----------WSREDHR--------RLVISFRGTTSKANWKSNLRADQTVLWIKSRGLRWRKSCLEKVKDVAAKIPLLNMALPRVHRGFWIAYESIRDELKEVTRLILDENPGISVYITGHSMGGALAVIAAYDLAVNFSIT--VNMYNFGGPRVGNPSFRQHYDSCVPTSYRVVMDGDIVPGWPRFWGLYQHVGTEISLDV--AGNLIVDPSFVERHLHNSSRRKTTMHGTNVYRVSIAKC 701          
BLAST of EWM24723.1 vs. NCBI_GenBank
Match: gi|635371403|emb|CCI40558.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 174.481 bits (441), Expect = 1.194e-40
Identity = 150/536 (27.99%), Postives = 229/536 (42.72%), Query Frame = 0
Query:  669 LALYLFSLCLTLFLCVLRYPSKFFQSRPPLSSSTTSSPASVGINTEDSGLPPSLRRVYALLSFLLVLLLAGWYLLFLSSVLLTGRALRRQAYLRTRSQQLSFRFISQQVFLILCCKLTLLVLGTLRLARLLFGVGAGGGGGKSWEGALSGWSLYATSSFQAPMGELLFISITAYLMAFIFSPATRWSGSDVGGGGYPHVSLEAELPPSLPPSLPPSSSFQSLRSKLLPSPKPIFCLETACWLMEASWQAYYELDARSLPSSPSPSSPSSLPASSPSSTSSLPGRMALGNLNVRMEGYVHDEGTDTRSVLGRVGGNEGGGGGGRGR-------------GRGGGCGRKGALLLAFRGTLSSRNMLTDLKMQQVAFPSDRVLRVVEEGLLSAVESALAREGTEYLYCTGHSLGGALAQLAAYDLSINFPALRHIQVYTLGAPRVGNPAFSSAYEARVPATFRVVVDGDLVPGMPKIFGMYRHSGVEVLVDAENGGNLIVSPSAVEKWLRLRNRTSTTNHSLTTYRDCMEACFSPDDLV 1191
            ++L++ +LC+ LF                L+SSTT   A   +           + ++ +L F+ + +L  W    +     T   L+   Y+ TR QQLS+RF+  +  LIL   L +       L ++ + +G       + E  L           Q+ +G+ +F+SI  YL+ ++  P              P          +    +   S F SL    +  P   FC+ETA WL+E +WQAY++      P  PS S    +             R A+ + +V     +    T  R V+   G +         R              R  GC R+   +L       S+  L D+ + +V     +    V   L   V   L        Y TGHS+GG LA LAAYD S++F     +++Y  G PRVGNP+F   Y   VP ++RVV+DGD+VPG+PK +G+Y+H G EV +D E  GNLIV PS +EK L++ ++     H    YR  +  CF  D LV
Sbjct:  407 ISLFIITLCMALF---------------GLNSSTTVLQACEIV----------YKTLFVMLGFIRLTMLLYWVFWAVQLSWKTASYLKSVPYMSTRYQQLSYRFLILESILILSYVLVMTTFRYWSLLQVWYLIGYEAFLQNAIETFLE------LDVGQSSLGQFIFLSIYVYLLLYVHLP--------------PSCQQNGTKTRTTSIKIREESQFGSLS---MTRPDS-FCIETALWLLELAWQAYFDS-----PGQPSESGYGEINLEPYGFELIAQLRNAVMDTHV----LIAYNATKNRLVVAFRGTSSRQNWKSNLRFHQTVLWIKSQRANRNDGCRRRLKRIL-------SKIPLFDMALPRVHSGFWQAYMTVRSDLKRVVRLLLYEHPGVSTYVTGHSMGGTLAILAAYDFSVSFDI--AVEMYNFGGPRVGNPSFVRNYNRHVPNSYRVVMDGDIVPGVPKFWGLYQHIGTEVALDLE--GNLIVGPSFIEKKLQVGSKHKLATHPSRVYRSALALCF--DKLV 871          
BLAST of EWM24723.1 vs. NCBI_GenBank
Match: gi|567948688|gb|ETK74429.1| (hypothetical protein, variant 2 [Phytophthora parasitica])

HSP 1 Score: 172.17 bits (435), Expect = 1.427e-40
Identity = 144/498 (28.92%), Postives = 214/498 (42.97%), Query Frame = 0
Query:  723 RRVYALLSFLLVLLLAGWYLLFLSSVLLTGRALRRQAYLRTRSQQLSFRFISQQVFLILCCKLTLLVLGTLRLARLLFGVGAGGGGGKSWEGALSGWSLYATSSFQAPMGELLFISITAYLMAFIFSPATRWSGSDVGGGGYPHVSLEAELPPSLPPSLPPSSSFQSLRSKLLPSPKPIFCLETACWLMEASWQAYYELDARSLPSSPSPSSPSSLPASSPSSTSSLPGRMALGNLNVRMEGYVHDEGTDTRSVLGRVGGNEGGGGGGRGRGRGGGCGRKGALLLAFRGTLSSRNMLTDLKMQQ-VAFPSDRVLR------------------------VVEEGLLSAVESALA--REGTEYL---------YCTGHSLGGALAQLAAYDLSINFPALRHIQVYTLGAPRVGNPAFSSAYEARVPATFRVVVDGDLVPGMPKIFGMYRHSGVEVLVDAENGGNLIVSPSAVEKWLRLRNRTSTTNHSLTTYRDCMEAC 1184
            + +Y LL F+   L+  W    +     +GR L+   Y+ TR +QLS+RF+  +  LI      L  L    L +  + VG       S        +   T +    +G+ LF+S+  YL+ F+  P      + +      HV  +           P   S+       L     +FC+ETA WL+E ++QAY++                  P   PSS+    G + L      +  ++    TDT  V+             R   R         L+++FRGT S  N  ++L+  Q V +   R LR                         V  G   A ES     +E T  +         Y TGHS+GGALA +AAYDL++NF     + +Y  G PRVGNP+F   Y++ VP ++RVV+DGD+VPG P+ +G+Y+H G E+ +D    GNLIV PS VE+ L   +R  TT H    YR  +  C
Sbjct:  268 KELYVLLGFIRTGLVLFWLTWIMIVGARSGRYLKALPYMATRFKQLSYRFLVLETLLIFVYTFVLSALQIFHLTQTWYFVGYDAFIQDSVH------TFAKTHTGHPSLGKFLFLSVYVYLVMFVHLPPLAGDSTGLLTSTAFHVDEK-----------PRVDSY-----GFLTPDSNLFCVETAGWLLELAYQAYFD------------------PPGCPSSSGY--GELTLERYGFELITHLRRNLTDTHVVVA----------WSREDHR--------RLVISFRGTTSKANWKSNLRADQTVLWIKSRGLRWRKSCLEKVKDVAAKIPLLNMALPRVHRGFWIAYESIRDELKEVTRLILDENPGISVYITGHSMGGALAVIAAYDLAVNFSIT--VNMYNFGGPRVGNPSFRQHYDSCVPTSYRVVMDGDIVPGWPRFWGLYQHVGTEISLDV--AGNLIVDPSFVERHLHNSSRRKTTMHGTNVYRVSIAKC 701          
BLAST of EWM24723.1 vs. NCBI_GenBank
Match: gi|635371404|emb|CCI40559.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 173.711 bits (439), Expect = 1.664e-40
Identity = 150/536 (27.99%), Postives = 229/536 (42.72%), Query Frame = 0
Query:  669 LALYLFSLCLTLFLCVLRYPSKFFQSRPPLSSSTTSSPASVGINTEDSGLPPSLRRVYALLSFLLVLLLAGWYLLFLSSVLLTGRALRRQAYLRTRSQQLSFRFISQQVFLILCCKLTLLVLGTLRLARLLFGVGAGGGGGKSWEGALSGWSLYATSSFQAPMGELLFISITAYLMAFIFSPATRWSGSDVGGGGYPHVSLEAELPPSLPPSLPPSSSFQSLRSKLLPSPKPIFCLETACWLMEASWQAYYELDARSLPSSPSPSSPSSLPASSPSSTSSLPGRMALGNLNVRMEGYVHDEGTDTRSVLGRVGGNEGGGGGGRGR-------------GRGGGCGRKGALLLAFRGTLSSRNMLTDLKMQQVAFPSDRVLRVVEEGLLSAVESALAREGTEYLYCTGHSLGGALAQLAAYDLSINFPALRHIQVYTLGAPRVGNPAFSSAYEARVPATFRVVVDGDLVPGMPKIFGMYRHSGVEVLVDAENGGNLIVSPSAVEKWLRLRNRTSTTNHSLTTYRDCMEACFSPDDLV 1191
            ++L++ +LC+ LF                L+SSTT   A   +           + ++ +L F+ + +L  W    +     T   L+   Y+ TR QQLS+RF+  +  LIL   L +       L ++ + +G       + E  L           Q+ +G+ +F+SI  YL+ ++  P              P          +    +   S F SL    +  P   FC+ETA WL+E +WQAY++      P  PS S    +             R A+ + +V     +    T  R V+   G +         R              R  GC R+   +L       S+  L D+ + +V     +    V   L   V   L        Y TGHS+GG LA LAAYD S++F     +++Y  G PRVGNP+F   Y   VP ++RVV+DGD+VPG+PK +G+Y+H G EV +D E  GNLIV PS +EK L++ ++     H    YR  +  CF  D LV
Sbjct:  384 ISLFIITLCMALF---------------GLNSSTTVLQACEIV----------YKTLFVMLGFIRLTMLLYWVFWAVQLSWKTASYLKSVPYMSTRYQQLSYRFLILESILILSYVLVMTTFRYWSLLQVWYLIGYEAFLQNAIETFLE------LDVGQSSLGQFIFLSIYVYLLLYVHLP--------------PSCQQNGTKTRTTSIKIREESQFGSLS---MTRPDS-FCIETALWLLELAWQAYFDS-----PGQPSESGYGEINLEPYGFELIAQLRNAVMDTHV----LIAYNATKNRLVVAFRGTSSRQNWKSNLRFHQTVLWIKSQRANRNDGCRRRLKRIL-------SKIPLFDMALPRVHSGFWQAYMTVRSDLKRVVRLLLYEHPGVSTYVTGHSMGGTLAILAAYDFSVSFDI--AVEMYNFGGPRVGNPSFVRNYNRHVPNSYRVVMDGDIVPGVPKFWGLYQHIGTEVALDLE--GNLIVGPSFIEKKLQVGSKHKLATHPSRVYRSALALCF--DKLV 848          
The following BLAST results are available for this feature:
BLAST of EWM24723.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106258|gb|EWM24723.1|0.000e+0100.00myb family transcription factor [Nannochloropsis g... [more]
gi|553187187|ref|XP_005854561.1|1.448e-9099.31lipase domain protein, partial [Nannochloropsis ga... [more]
gi|695381914|ref|XP_009517237.1|3.832e-4328.15hypothetical protein PHYSODRAFT_349422 [Phytophtho... [more]
gi|325183183|emb|CCA17641.1|3.957e-4128.14conserved hypothetical protein [Albugo laibachii N... [more]
gi|635371400|emb|CCI40555.1|7.462e-4127.99unnamed protein product [Albugo candida][more]
gi|635371402|emb|CCI40557.1|9.017e-4127.99unnamed protein product [Albugo candida][more]
gi|570938730|gb|ETP03987.1|9.588e-4128.92hypothetical protein, variant 2 [Phytophthora para... [more]
gi|635371403|emb|CCI40558.1|1.194e-4027.99unnamed protein product [Albugo candida][more]
gi|567948688|gb|ETK74429.1|1.427e-4028.92hypothetical protein, variant 2 [Phytophthora para... [more]
gi|635371404|emb|CCI40559.1|1.664e-4027.99unnamed protein product [Albugo candida][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5966rna5966Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications