EWM24769.1, cds5901 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24769.1 vs. NCBI_GenBank
Match: gi|585106334|gb|EWM24769.1| (ubiquitin-conjugating enzyme e2 j1 [Nannochloropsis gaditana]) HSP 1 Score: 798.119 bits (2060), Expect = 0.000e+0 Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 0
Query: 1 MDSHISYLRCMNRILSVLPSPAQRGKHLDSKEVAMDEHPRKGNVKNPAIRRIHADIRELQKDPSDQYHAAPLEENLFEWHFTLRGPPATDYDGGVYHGRILLPAEYPFKPPNIMLLTPSGRFEIGKKICLSISAHHPEHWQPAWGGLILEALISFFPTEPKGAVGSLDWTPEERKRLAVESQSWCCARCGLIKTLLPPLNTVFGEESGKEGEEGEEEGADGAENNGGKRTYAEAVSQLYVRAASESAASQEEALGEDKEDGGQKDGGVKPYPTLKHESGGSSASPSVPTPAEPNLRQQAAAPTSITSSSLARQRSAGTRSSSINSAAVAFVEENEGEEEKEDKLFYLAVFLFLLLILLVGRKLARAWIRQRGVYLEEGISASGWEDGIDL 390
MDSHISYLRCMNRILSVLPSPAQRGKHLDSKEVAMDEHPRKGNVKNPAIRRIHADIRELQKDPSDQYHAAPLEENLFEWHFTLRGPPATDYDGGVYHGRILLPAEYPFKPPNIMLLTPSGRFEIGKKICLSISAHHPEHWQPAWGGLILEALISFFPTEPKGAVGSLDWTPEERKRLAVESQSWCCARCGLIKTLLPPLNTVFGEESGKEGEEGEEEGADGAENNGGKRTYAEAVSQLYVRAASESAASQEEALGEDKEDGGQKDGGVKPYPTLKHESGGSSASPSVPTPAEPNLRQQAAAPTSITSSSLARQRSAGTRSSSINSAAVAFVEENEGEEEKEDKLFYLAVFLFLLLILLVGRKLARAWIRQRGVYLEEGISASGWEDGIDL
Sbjct: 1 MDSHISYLRCMNRILSVLPSPAQRGKHLDSKEVAMDEHPRKGNVKNPAIRRIHADIRELQKDPSDQYHAAPLEENLFEWHFTLRGPPATDYDGGVYHGRILLPAEYPFKPPNIMLLTPSGRFEIGKKICLSISAHHPEHWQPAWGGLILEALISFFPTEPKGAVGSLDWTPEERKRLAVESQSWCCARCGLIKTLLPPLNTVFGEESGKEGEEGEEEGADGAENNGGKRTYAEAVSQLYVRAASESAASQEEALGEDKEDGGQKDGGVKPYPTLKHESGGSSASPSVPTPAEPNLRQQAAAPTSITSSSLARQRSAGTRSSSINSAAVAFVEENEGEEEKEDKLFYLAVFLFLLLILLVGRKLARAWIRQRGVYLEEGISASGWEDGIDL 390
BLAST of EWM24769.1 vs. NCBI_GenBank
Match: gi|298710056|emb|CBJ31773.1| (ubiquitin-conjugating enzyme E2, putative [Ectocarpus siliculosus]) HSP 1 Score: 265.003 bits (676), Expect = 1.523e-82 Identity = 127/210 (60.48%), Postives = 155/210 (73.81%), Query Frame = 0
Query: 43 NVKNPAIRRIHADIRELQKDPSDQYHAAPLEENLFEWHFTLRGPPATDYDGGVYHGRILLPAEYPFKPPNIMLLTPSGRFEIGKKICLSISAHHPEHWQPAWG-GLILEALISFFPTEPKGAVGSLDWTPEERKRLAVESQSWCCARCGLIKTLLPPLNTVFGEESGKEGEEGEEEGADGAENNGGKRTYAEAVSQLY---VRAASESAA 248
N+KNPAI+RIHAD+REL KDPSDQYHAAPLE NLFEWHFT+RGPP T+++GGVYHGRI+LP EYPF+PP+IM TP+GRF G KICL+IS++HPEHWQPAWG LILEALISFFP+ GA+G LDW+ ERKRLAVES+ W C +CGL+ LLP L +GE GA G+ +YA+ + +L+ + A E AA
Sbjct: 4 NIKNPAIKRIHADVRELMKDPSDQYHAAPLESNLFEWHFTIRGPPDTEFEGGVYHGRIILPPEYPFRPPDIMFNTPNGRFSTGMKICLTISSYHPEHWQPAWGIRLILEALISFFPSPSHGALGGLDWSAGERKRLAVESRKWKCYKCGLVADLLPELRP-----------KGESGGAS------GRSSYADQIKELHKLKAKTADEVAA 196
BLAST of EWM24769.1 vs. NCBI_GenBank
Match: gi|635367482|emb|CCI10035.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 252.677 bits (644), Expect = 1.749e-78 Identity = 123/216 (56.94%), Postives = 156/216 (72.22%), Query Frame = 0
Query: 42 GNVKNPAIRRIHADIRELQKDPSDQYHAAPLEENLFEWHFTLRGPPATDYDGGVYHGRILLPAEYPFKPPNIMLLTPSGRFEIGKKICLSISAHHPEHWQPAWG-GLILEALISFFPTEPKGAVGSLDWTPEERKRLAVESQSWCCARCGLIKTLLPPLNTVFGEESGKEGEEGEEEG---ADGAENNGGKRTYAEAVSQLYVRAASESAASQEEA 253
+V+N AI+RI D+RE+ +PSDQY AAPLE+N+F+WHFTLRG T+++GG+YHGRILLPA+YPFKPPNI+LLTP+GRFE+ KKICLSISAHHPE WQPAWG LILEALISF PT+ +GA+G+L++T EER+RLA++S+ +CC CG I LLP L+ KE E E+ E K+T AE A SES+ QEE+
Sbjct: 20 ASVRNTAIKRIQGDVREMMTNPSDQYTAAPLEDNMFDWHFTLRGTRDTEFEGGIYHGRILLPADYPFKPPNIILLTPNGRFEVRKKICLSISAHHPEEWQPAWGVRLILEALISFMPTQGEGAIGALNFTVEERRRLAIKSREFCCDVCGNIAQLLPELSEGSITNEKKESEYAEQIAKLHVHTVEKEAEKQTTAE-------NARSESSVPQEES 228
BLAST of EWM24769.1 vs. NCBI_GenBank
Match: gi|673042241|ref|XP_008875081.1| (hypothetical protein H310_10459 [Aphanomyces invadans] >gi|574469274|gb|ETV96289.1| hypothetical protein H310_10459 [Aphanomyces invadans]) HSP 1 Score: 250.366 bits (638), Expect = 2.885e-77 Identity = 138/283 (48.76%), Postives = 177/283 (62.54%), Query Frame = 0
Query: 43 NVKNPAIRRIHADIRELQKDPSDQYHAAPLEENLFEWHFTLRGPPATDYDGGVYHGRILLPAEYPFKPPNIMLLTPSGRFEIGKKICLSISAHHPEHWQPAWG-GLILEALISFFPTEPKGAVGSLDWTPEERKRLAVESQSWCCARCGLIKTLLPPLNTVFGEESGKEGEEGEEEGADGAENNGGKRTYAEAVSQLYVR-----AASESAASQEEALGEDKEDGGQKDGGVKPYPTLKHESGGSSASPSVPTPAEPNLRQQAAAPTSITSSSLARQRSAGTR 319
++ N AI+RI AD+RE+ DPSDQY AAPLE+N+F+WHFT+RGP T++ GGVYHGRILLP++YPFKPPNI+LLTP+GRFE+ KKICLSISA+HPEHWQPAWG LILEALISF PT+ +GA+G+LD+TPEERK LA+ES W C +CG I L+P EE E E A ++ YA ++QL++ + S++ S E A D + P P ++ A P+P LR AP T S R SA +R
Sbjct: 4 SIGNTAIKRIRADVREMMTDPSDQYSAAPLEDNMFDWHFTIRGPRDTEFAGGVYHGRILLPSDYPFKPPNIILLTPNGRFEVKKKICLSISAYHPEHWQPAWGVRLILEALISFMPTKGEGAIGALDFTPEERKALALESVRWTCPQCGDINALIP--------------EEREREDATESK-------YASQIAQLHIHNMEAPSTSDTTPSDETAEISDTAIPSAA-PEIDPSPAAPSDTNALHAQDLAPSPP---LRDTTRAP---TPSPTRRPASAASR 258
BLAST of EWM24769.1 vs. NCBI_GenBank
Match: gi|1173941628|gb|OQR90751.1| (ubiquitin-conjugating enzyme E2 [Achlya hypogyna]) HSP 1 Score: 246.899 bits (629), Expect = 2.949e-76 Identity = 108/156 (69.23%), Postives = 135/156 (86.54%), Query Frame = 0
Query: 43 NVKNPAIRRIHADIRELQKDPSDQYHAAPLEENLFEWHFTLRGPPATDYDGGVYHGRILLPAEYPFKPPNIMLLTPSGRFEIGKKICLSISAHHPEHWQPAWG-GLILEALISFFPTEPKGAVGSLDWTPEERKRLAVESQSWCCARCGLIKTLLP 197
++ N AI+RI AD+RE+ DPSDQY+AAPLE N+F+WHFT+RGP T+++GG++HGRILLP+EYPFKPPNI+LLTP+GRFE+ KKICLSISA+HPEHWQPAWG LILEALISF PT+ +GA+G+LD+T EERK+LA ES W C +CG IK L+P
Sbjct: 4 SIGNTAIKRIRADVREMMTDPSDQYYAAPLESNMFDWHFTIRGPRDTEFEGGIFHGRILLPSEYPFKPPNIILLTPNGRFEVKKKICLSISAYHPEHWQPAWGVRLILEALISFMPTKGEGAIGALDFTAEERKKLAKESVVWSCPQCGSIKDLIP 159
BLAST of EWM24769.1 vs. NCBI_GenBank
Match: gi|1173956049|gb|OQS02930.1| (ubiquitin-conjugating enzyme E2 [Thraustotheca clavata]) HSP 1 Score: 246.128 bits (627), Expect = 1.018e-75 Identity = 108/157 (68.79%), Postives = 135/157 (85.99%), Query Frame = 0
Query: 42 GNVKNPAIRRIHADIRELQKDPSDQYHAAPLEENLFEWHFTLRGPPATDYDGGVYHGRILLPAEYPFKPPNIMLLTPSGRFEIGKKICLSISAHHPEHWQPAWG-GLILEALISFFPTEPKGAVGSLDWTPEERKRLAVESQSWCCARCGLIKTLLP 197
++ N AI+RI AD+RE+ DPSDQY+AAPLE N+F+WHFT+RGP T+++GG++HGRILLP+EYPFKPPNI+LLTP+GRFE+ KKICLSISA+HPEHWQPAWG LILEALISF PT+ +GA+G+LD+T EERK+LA ES W C +CG IK L+P
Sbjct: 3 ASIGNTAIKRIRADVREMMTDPSDQYYAAPLENNMFDWHFTIRGPRDTEFEGGIFHGRILLPSEYPFKPPNIILLTPNGRFEVKKKICLSISAYHPEHWQPAWGVRLILEALISFMPTKGEGAIGALDFTAEERKKLAQESVHWTCPQCGEIKGLIP 159
BLAST of EWM24769.1 vs. NCBI_GenBank
Match: gi|325188206|emb|CCA22747.1| (ubiquitinconjugating enzyme E2 putative [Albugo laibachii Nc14]) HSP 1 Score: 244.973 bits (624), Expect = 1.753e-75 Identity = 113/207 (54.59%), Postives = 153/207 (73.91%), Query Frame = 0
Query: 42 GNVKNPAIRRIHADIRELQKDPSDQYHAAPLEENLFEWHFTLRGPPATDYDGGVYHGRILLPAEYPFKPPNIMLLTPSGRFEIGKKICLSISAHHPEHWQPAWG-GLILEALISFFPTEPKGAVGSLDWTPEERKRLAVESQSWCCARCGLIKTLLPPLNTVFGEESGKEGEEGEEEGADGAENNGGKRTYAEAVSQLYVRAASESA 247
+V+N AI+RI D+RE+ +PSDQY A PLE+N+F+WHFTLRG T+++GGVYHGRILLPA+YPF+PPNI+LLTP+GRFE+ KKICLSISAHHPE WQPAWG LILEALISF PT+ +GA+G+L+++ EER+RLA++S+ +CC CG + LLP L+ + K+GE+ E +AE +++L+V + A
Sbjct: 20 ASVRNTAIKRIQGDVREMMTNPSDQYTAVPLEDNMFDWHFTLRGTRDTEFEGGVYHGRILLPADYPFRPPNIILLTPNGRFEVKKKICLSISAHHPEEWQPAWGVRLILEALISFMPTQGEGAIGALNFSVEERRRLAIKSREFCCDTCGNVAQLLPELS-----DDSKKGEKKVSE-------------FAEQIAKLHVHTVEKEA 208
BLAST of EWM24769.1 vs. NCBI_GenBank
Match: gi|698791054|ref|XP_009828559.1| (hypothetical protein H257_05392 [Aphanomyces astaci] >gi|574116338|gb|ETV81822.1| hypothetical protein H257_05392 [Aphanomyces astaci]) HSP 1 Score: 243.047 bits (619), Expect = 1.504e-74 Identity = 108/157 (68.79%), Postives = 134/157 (85.35%), Query Frame = 0
Query: 42 GNVKNPAIRRIHADIRELQKDPSDQYHAAPLEENLFEWHFTLRGPPATDYDGGVYHGRILLPAEYPFKPPNIMLLTPSGRFEIGKKICLSISAHHPEHWQPAWG-GLILEALISFFPTEPKGAVGSLDWTPEERKRLAVESQSWCCARCGLIKTLLP 197
++ N AI+RI AD+RE+ DPSDQY AAPLE+N+F+WHFT+RGP T++ GGVYHGRILLP++YPFKPPNI+LLTP+GRFE+ KKICLSISA+HPEHWQPAWG LILEALISF PT+ +GA+G+LD+TP+ERK LA+ES W C +CG I L+P
Sbjct: 4 SSIGNTAIKRIRADVREMMTDPSDQYFAAPLEDNMFDWHFTIRGPRDTEFAGGVYHGRILLPSDYPFKPPNIILLTPNGRFEVKKKICLSISAYHPEHWQPAWGVRLILEALISFMPTKGEGAIGALDFTPDERKALALESVRWTCPQCGDINALIP 160
BLAST of EWM24769.1 vs. NCBI_GenBank
Match: gi|669151482|ref|XP_008611303.1| (hypothetical protein SDRG_07259 [Saprolegnia diclina VS20] >gi|530736777|gb|EQC35019.1| hypothetical protein SDRG_07259 [Saprolegnia diclina VS20]) HSP 1 Score: 243.047 bits (619), Expect = 1.832e-74 Identity = 107/156 (68.59%), Postives = 132/156 (84.62%), Query Frame = 0
Query: 43 NVKNPAIRRIHADIRELQKDPSDQYHAAPLEENLFEWHFTLRGPPATDYDGGVYHGRILLPAEYPFKPPNIMLLTPSGRFEIGKKICLSISAHHPEHWQPAWG-GLILEALISFFPTEPKGAVGSLDWTPEERKRLAVESQSWCCARCGLIKTLLP 197
++ N AI+RI AD+RE+ DPSDQY AAPLE N+F+WHFT+RGP T ++GG++HGRILLP+EYPFKPPNI+LLTP+GRFE+ KKICLSISA+HPEHWQPAWG LILEALISF PT+ +GA+G+LD+T +ERK LA ES W C +CG IK L+P
Sbjct: 4 SIGNTAIKRIRADVREMMTDPSDQYFAAPLENNMFDWHFTIRGPRDTAFEGGIFHGRILLPSEYPFKPPNIILLTPNGRFEVKKKICLSISAYHPEHWQPAWGVRLILEALISFMPTKGEGAIGALDFTADERKTLAAESVHWSCPQCGSIKDLIP 159
BLAST of EWM24769.1 vs. NCBI_GenBank
Match: gi|695395442|ref|XP_009521163.1| (hypothetical protein PHYSODRAFT_479615 [Phytophthora sojae] >gi|348686060|gb|EGZ25875.1| hypothetical protein PHYSODRAFT_479615 [Phytophthora sojae]) HSP 1 Score: 241.891 bits (616), Expect = 2.066e-74 Identity = 139/326 (42.64%), Postives = 188/326 (57.67%), Query Frame = 0
Query: 42 GNVKNPAIRRIHADIRELQKDPSDQYHAAPLEENLFEWHFTLRGPPATDYDGGVYHGRILLPAEYPFKPPNIMLLTPSGRFEIGKKICLSISAHHPEHWQPAWG-GLILEALISFFPTEPKGAVGSLDWTPEERKRLAVESQSWCCARCGLIKTLLPPLNTVFGEESGKEGEEGEEEGADGAENNGGKRTYAEAVSQLYVRAASESAASQEEALGEDKEDGGQKDGGVKPYPTLKHESGGSSASPSVPTPAEPNLRQQAAAPTSITSSSLARQRSAGTRSSSINSAAVAFVEENEGEEEKEDKLFYLAVFLFLLLILLVGRKLARA 366
+V+N AI+RI D+RE+ +PSDQY AAPLE N+F+WHFTLRGP T+++GG+YHGRI+LP++YPFKPPNIMLLTP+GRFE+ KKICLSISA+HPE WQPAWG LILEALISF PT+ +GA+G+LD+ EERKRLA S + C CG + LLP L T GEE+ K+ + YAE ++QL++ S A A + KE ++ A+ V PA +L++ AP + R+ S S+++ L YL V + + L L+ +KL +A
Sbjct: 3 ASVRNTAIKRIQGDVREMMTNPSDQYAAAPLETNMFDWHFTLRGPRDTEFEGGIYHGRIILPSDYPFKPPNIMLLTPNGRFEVKKKICLSISAYHPEEWQPAWGVRLILEALISFMPTKGEGAIGALDFPAEERKRLAKLSVDYKCETCGRVADLLPELETEDGEETEKKPSK-----------------YAEQIAQLHMH--SLETAPPASAAKDTKEAA---------------KTEAPPAAEEVEAPAVDDLQEDLDAPFVVDGIPQVRE------SDSVDTF-----------------LHYLTVAIVVALFALIYKKLLQA 271 The following BLAST results are available for this feature:
BLAST of EWM24769.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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