EWM24829.1, cds5848 (CDS) Nannochloropsis gaditana

Overview
NameEWM24829.1
Unique Namecds5848
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:1016962..1017055 +
Alignment locationCM002466.1:1017102..1017250 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24829.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100234g10.1033.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:1016962..1017055 +
CM002466.1supercontigCM002466.1:1017102..1017250 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24829.1 vs. NCBI_GenBank
Match: gi|585106425|gb|EWM24829.1| (hypothetical protein Naga_100234g10 [Nannochloropsis gaditana])

HSP 1 Score: 166.007 bits (419), Expect = 3.597e-52
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 
Query:    1 MLTFPCIIAGAKSRHKSCLRCGDTELRRCSNLQAKDSLQDEAQGYVASTLSLRRQDGPSYRYGLVYLLWRAVCSENERKL 80
            MLTFPCIIAGAKSRHKSCLRCGDTELRRCSNLQAKDSLQDEAQGYVASTLSLRRQDGPSYRYGLVYLLWRAVCSENERKL
Sbjct:    1 MLTFPCIIAGAKSRHKSCLRCGDTELRRCSNLQAKDSLQDEAQGYVASTLSLRRQDGPSYRYGLVYLLWRAVCSENERKL 80
The following BLAST results are available for this feature:
BLAST of EWM24829.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106425|gb|EWM24829.1|3.597e-52100.00hypothetical protein Naga_100234g10 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5863rna5863Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications