EWM24851.1, cds5821 (CDS) Nannochloropsis gaditana

Overview
NameEWM24851.1
Unique Namecds5821
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:962402..962618 -
Alignment locationCM002466.1:962154..962283 -
Alignment locationCM002466.1:961985..962072 -
Alignment locationCM002466.1:961179..961784 -

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Properties
Property NameValue
Protein idEWM24851.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100882g2.6796.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:962402..962618 -
CM002466.1supercontigCM002466.1:962154..962283 -
CM002466.1supercontigCM002466.1:961985..962072 -
CM002466.1supercontigCM002466.1:961179..961784 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24851.1 vs. NCBI_GenBank
Match: gi|585106455|gb|EWM24851.1| (hypothetical protein Naga_100882g2 [Nannochloropsis gaditana] >gi|585106456|gb|EWM24852.1| hypothetical protein Naga_100882g2 [Nannochloropsis gaditana])

HSP 1 Score: 696.427 bits (1796), Expect = 0.000e+0
Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0 
Query:    1 MPSFHRFVSFLLVLLRLLLAPAFAPAPPTSSPSNHAKAIVKTASRNNKQLIQPIRAVTQTGTLAETVGGGWAGWECHFSFSSGLVLPVPADDLPEALREWEVAVWGWEGFAYDAVREDEGTVDIERRAARFMVEAGCGCENVGKQKSHQRLQPLAWARGGLGYVTADRLTDSLLRLEAALSSPPSSFPSSTPSASAPAARRARVILDLRCPPVPPSTPMSSPQGAFVCSVRDPVRLYLERRFTSALPATDPFKAAIDQTSISRHVGVPCFGEPERGAAGREWGGSGVWVRWREDREVLEVGWRPEVARGQEGEAGVEEKKGMAWRIRLGQEECKVVDCEWVENVTG 346
            MPSFHRFVSFLLVLLRLLLAPAFAPAPPTSSPSNHAKAIVKTASRNNKQLIQPIRAVTQTGTLAETVGGGWAGWECHFSFSSGLVLPVPADDLPEALREWEVAVWGWEGFAYDAVREDEGTVDIERRAARFMVEAGCGCENVGKQKSHQRLQPLAWARGGLGYVTADRLTDSLLRLEAALSSPPSSFPSSTPSASAPAARRARVILDLRCPPVPPSTPMSSPQGAFVCSVRDPVRLYLERRFTSALPATDPFKAAIDQTSISRHVGVPCFGEPERGAAGREWGGSGVWVRWREDREVLEVGWRPEVARGQEGEAGVEEKKGMAWRIRLGQEECKVVDCEWVENVTG
Sbjct:    1 MPSFHRFVSFLLVLLRLLLAPAFAPAPPTSSPSNHAKAIVKTASRNNKQLIQPIRAVTQTGTLAETVGGGWAGWECHFSFSSGLVLPVPADDLPEALREWEVAVWGWEGFAYDAVREDEGTVDIERRAARFMVEAGCGCENVGKQKSHQRLQPLAWARGGLGYVTADRLTDSLLRLEAALSSPPSSFPSSTPSASAPAARRARVILDLRCPPVPPSTPMSSPQGAFVCSVRDPVRLYLERRFTSALPATDPFKAAIDQTSISRHVGVPCFGEPERGAAGREWGGSGVWVRWREDREVLEVGWRPEVARGQEGEAGVEEKKGMAWRIRLGQEECKVVDCEWVENVTG 346
The following BLAST results are available for this feature:
BLAST of EWM24851.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106455|gb|EWM24851.1|0.000e+0100.00hypothetical protein Naga_100882g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5836rna5836Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications