EWM24875.1, cds5797 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24875.1 vs. NCBI_GenBank
Match: gi|585106497|gb|EWM24875.1| (Methyltransferase FkbM [Nannochloropsis gaditana]) HSP 1 Score: 638.647 bits (1646), Expect = 0.000e+0 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query: 1 MLPTSTHLFHRLSQVSRDIAMHGYWEMENMSVLLLLLERARWQRREWRHPESPSRPPRRDELVMLDVGGNLGAYTLCLATAGFRVLTFEAMRRNIQAIREGICRNSGLKERVILLEKGLAEKEETCTLVVDKENIGDGITRCQGQGVSLGSEEVREDAIQVTTLDRALYCPQSSRDAVPSFYTGRPAALKMDVEGFEMLVVQGGQGFLNTSDLAVVLHENGHMPFEKRKYLLEYFVDRGYVFLCPEEMYEWVDGRGGKRGRKRKVPKIEAFAEFDERIFDCWDIAWVKKEDVEVEAPRGGRGQRYWLLLD 310
MLPTSTHLFHRLSQVSRDIAMHGYWEMENMSVLLLLLERARWQRREWRHPESPSRPPRRDELVMLDVGGNLGAYTLCLATAGFRVLTFEAMRRNIQAIREGICRNSGLKERVILLEKGLAEKEETCTLVVDKENIGDGITRCQGQGVSLGSEEVREDAIQVTTLDRALYCPQSSRDAVPSFYTGRPAALKMDVEGFEMLVVQGGQGFLNTSDLAVVLHENGHMPFEKRKYLLEYFVDRGYVFLCPEEMYEWVDGRGGKRGRKRKVPKIEAFAEFDERIFDCWDIAWVKKEDVEVEAPRGGRGQRYWLLLD
Sbjct: 1 MLPTSTHLFHRLSQVSRDIAMHGYWEMENMSVLLLLLERARWQRREWRHPESPSRPPRRDELVMLDVGGNLGAYTLCLATAGFRVLTFEAMRRNIQAIREGICRNSGLKERVILLEKGLAEKEETCTLVVDKENIGDGITRCQGQGVSLGSEEVREDAIQVTTLDRALYCPQSSRDAVPSFYTGRPAALKMDVEGFEMLVVQGGQGFLNTSDLAVVLHENGHMPFEKRKYLLEYFVDRGYVFLCPEEMYEWVDGRGGKRGRKRKVPKIEAFAEFDERIFDCWDIAWVKKEDVEVEAPRGGRGQRYWLLLD 310
BLAST of EWM24875.1 vs. NCBI_GenBank
Match: gi|553182892|ref|XP_005853802.1| (methyltransferase family [Nannochloropsis gaditana CCMP526] >gi|422295258|gb|EKU22557.1| methyltransferase family [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 600.512 bits (1547), Expect = 0.000e+0 Identity = 296/321 (92.21%), Postives = 297/321 (92.52%), Query Frame = 0
Query: 14 QVSRDIAMHGYWEMENMSVLLLLLERARWQRREWRHPESPSRPPRRDELVMLDVGGNLGAYTLCLATAGFRVLTFEAMRRNIQAIREGICRNSGLKERVILLEKGLAEKEE------------------------TCTLVVDKENIGDGITRCQGQGVSLGSEEVREDAIQVTTLDRALYCPQSSRDAVPSFYTGRPAALKMDVEGFEMLVVQGGQGFLNTSDLAVVLHENGHMPFEKRKYLLEYFVDRGYVFLCPEEMYEWVDGRGGKRGRKRKVPKIEAFAEFDERIFDCWDIAWVKKEDVEVEAPRGGRGQRYWLLLD 310
+VSRDIAMHGYWEMENMSVLLLLLERARWQRREWRHPESPSRPPRRDELVMLDVGGNLGAYTLCLATAGFRVLTFEAMRRNIQAIREGICRNSGLKERVILLEKGLAEKEE TCTLVVDKENIGDGITRCQGQGVSLGSEEVREDAIQVTTLDRALYCPQSSRDAVPSFYTGRPAALKMDVEGFEMLVVQGGQGFLNTSDLAVVLHENGHMPFEKRKYLLEYFVDRGYVFLCPEEMYEWVDGRGGKRGRKRKVPKIEAFAEFDERIFDCWDIAWVKKEDVEVEAPRGGRGQRYWLLLD
Sbjct: 76 KVSRDIAMHGYWEMENMSVLLLLLERARWQRREWRHPESPSRPPRRDELVMLDVGGNLGAYTLCLATAGFRVLTFEAMRRNIQAIREGICRNSGLKERVILLEKGLAEKEESRPSSLSRTFDFLPVPTAQSSQPQTCTLVVDKENIGDGITRCQGQGVSLGSEEVREDAIQVTTLDRALYCPQSSRDAVPSFYTGRPAALKMDVEGFEMLVVQGGQGFLNTSDLAVVLHENGHMPFEKRKYLLEYFVDRGYVFLCPEEMYEWVDGRGGKRGRKRKVPKIEAFAEFDERIFDCWDIAWVKKEDVEVEAPRGGRGQRYWLLLD 396
BLAST of EWM24875.1 vs. NCBI_GenBank
Match: gi|585112487|gb|EWM29904.1| (Methyltransferase FkbM [Nannochloropsis gaditana]) HSP 1 Score: 108.227 bits (269), Expect = 2.078e-23 Identity = 71/228 (31.14%), Postives = 112/228 (49.12%), Query Frame = 0
Query: 15 VSRDIAMHGYWEMENMSVLLLLLERARWQRREWRHPESPSRPPRRDELVMLDVGGNLGAYTLCLATAGFRVLTFEAMRRNIQAIREGICRNSGLKERVILLEKGLAEKEETCT-LVVDKENIGDGITRCQGQ-GVSLGSEEVREDAIQVTTLDRALYCPQSSRDAVPSFYTGRPAALKMDVEGFEMLVVQGGQGFLNTSDLAVVLHENGHMPFEKRKYLLEYFVDRGY 240
VS I +G+WE + L+++L + + R H +++ +LD+GGN+GA+T+ AGF V+TFE + +N IR +C N +ERV L GL + C N G+GI C G + + ++V LD L + P G A+KMDVEGFE V++GG+ F + + ++ E G MP +R+ +L++F GY
Sbjct: 122 VSGAIRSNGHWEHHLSTALVMVLSKVA-EDRGLPH----------EQVHLLDIGGNVGAHTVYAQAAGFSVVTFEPLPQNEAIIRTNLCFNDPKQERVTLFTNGLGSEPTLCKQFSAPNYNRGNGIVNCNGSIPQHPDGQLIYRGQMEVLRLDDVLLPCKDGTQLPPDIVFG---AMKMDVEGFEPEVLKGGETFFTKALIPYIVFEIGRMPETRRQAVLQFFYGLGY 335
BLAST of EWM24875.1 vs. NCBI_GenBank
Match: gi|403377418|gb|EJY88705.1| (methyltransferase, FkbM family (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 90.1225 bits (222), Expect = 1.235e-16 Identity = 59/208 (28.37%), Postives = 95/208 (45.67%), Query Frame = 0
Query: 12 LSQVSRDIAMHGYWEMENMSVLLLLLERARWQRREWRHPESPSRPPRRDELVMLDVGGNLGAYTLCLATAGFRVLTFEAMRRNIQAIREGICRNSGLKERVILLEKGLAEKEETCTLVVDKENIGDGITRCQGQGVSLGSEEVREDAIQVTTLDRALYCPQSSRDAVPSFYTGRPAALKMDVEGFEMLVVQGGQGFLNTSDLAVVLHE 219
L VS I M WE +++ L+ R++ R+ + ++DVG N+G ++L A+ GF V+ FE NI + I NSG + L E GL+ +++TC L N+ +G RC Q G + + +TTLD S + +P +K+D EGFE +++GG+ FL + +L E
Sbjct: 204 LDAVSYHIKMENQWEGIETMLIMQKLQDLRYENRD-------------KVITLIDVGANIGWFSLAAASKGFNVIAFEPFIENINGFKASIQANSGFDYFITLYEVGLSNEDKTCQLYTYDYNMLNGNIRCDDQEFEEGWSRGQ---VNITTLD-------SYVNVIPE--NALIGVMKIDTEGFEYFILKGGEQFLRMHKVRYILME 386
BLAST of EWM24875.1 vs. NCBI_GenBank
Match: gi|403348513|gb|EJY73693.1| (FkbM family methyltransferase (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 87.4261 bits (215), Expect = 1.896e-16 Identity = 62/211 (29.38%), Postives = 105/211 (49.76%), Query Frame = 0
Query: 12 LSQVSRDIAMHGYWEMENMSVLLLLLERARWQRREWRHPESPSRPPRRDELVMLDVGGNLGAYTLCLATAGFRVLTFEAMRRNIQAIREGICRNSGLKERVILLEKGLAEKE-ETCTLVVDKENIGDGITRCQGQG-VSLGSEEVRE-DAIQVTTLDRALYCPQSSRDAVPSFYTGRPAALKMDVEGFEMLVVQGGQGFLNTSDLAVVLHE 219
L VS I WE+EN ++ + +W E P + ++ ++DVG N+G ++L A+ GF VL FE M+ NI+ +R I +NS ++ + L+E L KE + C + +NI +G C+ V + +++ RE + + LD S + +F+ +K+D EGFEM V++G + FL T + +L E
Sbjct: 8 LDAVSYHIREENTWELENTQEIM--------SKLQWLKQEFPGK-----QITLIDVGANIGWFSLVAASKGFHVLAFEPMKENIKIMRANINQNS-FEKYINLVEVALGNKEDQDCLISSPSDNILNGNLYCESTTKVMIPNDQGRERQQLHLKKLDSFTETAASEK----TFF----GVMKIDTEGFEMYVLKGAKNFLLTHRVPFILLE 196
BLAST of EWM24875.1 vs. NCBI_GenBank
Match: gi|926779956|ref|XP_013898452.1| (hypothetical protein MNEG_8530 [Monoraphidium neglectum] >gi|761968138|gb|KIY99432.1| hypothetical protein MNEG_8530 [Monoraphidium neglectum]) HSP 1 Score: 86.2705 bits (212), Expect = 7.721e-16 Identity = 66/229 (28.82%), Postives = 106/229 (46.29%), Query Frame = 0
Query: 22 HGYWEMENMSVLLLLLERARWQRREWRHPESPSRPPRRDELVMLDVGGNLGAYTLCLATAGFRVLTFEAMRRNIQAIREGICRNSGLKERVILLEKGLAEKEETCTLVVDKENIGDGITRCQGQG--------VSLGSEEVREDAIQVTTLDRALYCPQSSRDAVPSFYTGRPAALKMDVEGFEMLVVQGGQGFLNTSDLAVVLHENGHMPFEK--RKYLLEYFVDRGY 240
H + E +++ L R+ +HP +R +++ +++DVG N+G +TL A AG RV FEAM NIQ +R +C N GL +RV L GL + TC+++ D N+GDG T C G + V ++V LD S +K+DVEGFE V++G L+ ++ + H ++ + L++ D+GY
Sbjct: 19 HQWESQETKEMMVALRSPVPASPRDSKHP---ARWVKKEAPLVVDVGANIGWFTLKAAEAGARVAAFEAMASNIQLVRTSLCANPGLMDRVALYNTGLGTQRATCSIISDVSNMGDGHTICDKDTKDVIKQWKSEFGRDYVVRGEMRVRRLD--------------SLIEEDVQFMKIDVEGFEAEVLKGAAQLLDNHNVWFIAAACNHNKLKEAGKAEYLKFLNDQGY 230
BLAST of EWM24875.1 vs. NCBI_GenBank
Match: gi|678331459|emb|CDW78597.1| (UNKNOWN [Stylonychia lemnae]) HSP 1 Score: 85.5001 bits (210), Expect = 8.372e-16 Identity = 52/166 (31.33%), Postives = 85/166 (51.20%), Query Frame = 0
Query: 57 PRRDE---LVMLDVGGNLGAYTLCLATAGFRVLTFEAMRRNIQAIREGICRNSGLKERVILLEKGLAEKEETCTLVVDKENIGDGITRCQGQGVSLGSEEVREDAIQVTTLDRALYCPQSSRDAVPSFYTGRPAALKMDVEGFEMLVVQGGQGFLNTSDLAVVLHE 219
P+ +E + +DVGGN+G +TL A F V TFE M+ N A++ +C LKE+V + E GL ++ C + NI +G+ +C+ Q + E RE IQ+ LD + D +P +K+D+EG+E + +GG F+N + ++ E
Sbjct: 34 PKVNEDKRVAFIDVGGNIGWFTLVAARNEFLVYTFEPMKSNTDALKYSLCLQPSLKEKVQIFEYGLGDQNYLCGIYSLDINIQNGLVKCESQFAA--GAEFRE-FIQLKKLDDFI-------DNIPD--DVLIGVMKIDIEGYEYFLFKGGSQFINRYKIPYIIIE 187
BLAST of EWM24875.1 vs. NCBI_GenBank
Match: gi|552811978|ref|XP_005843604.1| (hypothetical protein CHLNCDRAFT_140178 [Chlorella variabilis] >gi|307103240|gb|EFN51502.1| hypothetical protein CHLNCDRAFT_140178 [Chlorella variabilis]) HSP 1 Score: 84.7297 bits (208), Expect = 2.489e-15 Identity = 59/191 (30.89%), Postives = 89/191 (46.60%), Query Frame = 0
Query: 15 VSRDIAMHGYWEMENMSVLLLLLERARWQRREWRHPESPSRPPRRDELVMLDVGGNLGAYTLCLATAGFRVLTFEAMRRNIQAIREGICRNSGLKERVILLEKGLAEKEETCTLVVDKENIGDGITRCQGQGVSLGSEE-VREDAIQVTTLDRALYCPQSSRDAVPSFYTGRPAAL-------KMDVEGFE 197
VS I G WE ++ LER +Q+ +R ++++ +D+G N+G +T+ A G+ V+ FEA N AIR+ +C N L++RV L+ KGL++ E C +V +N+GDG C L + V + TLD S+ G AL K+DVEGFE
Sbjct: 119 VSSSIEQGGAWEPHETREVVTKLER--FQQ---------ARGLSKEQVYFIDIGANVGYFTVNAAALGYSVIAFEATTPNAFAIRQTLCSNPQLQKRVALVNKGLSDAIERCAVVAASDNVGDGHVECNKDAADLAASGLVVHGQFDLITLD--------------SYVEGHLEALRQKVGVVKIDVEGFE 284
BLAST of EWM24875.1 vs. NCBI_GenBank
Match: gi|1207924274|ref|XP_021351178.1| (uncharacterized protein LOC110448966 [Mizuhopecten yessoensis] >gi|1205903983|gb|OWF51598.1| hypothetical protein KP79_PYT04615 [Mizuhopecten yessoensis]) HSP 1 Score: 84.7297 bits (208), Expect = 7.447e-15 Identity = 68/219 (31.05%), Postives = 103/219 (47.03%), Query Frame = 0
Query: 61 ELVMLDVGGNLGAYTLCLATAGFRVLTFEAMRRNIQAIREGICRNSGLKERVILLEKGLAEKEETCTLVVDKENIGDGITRCQGQGVSLG-SEEVR---EDAIQVTTLDRALYCPQSSRDAVPSFYTGRPAALKMDVEGFEMLVVQGGQGFLNTSDLAVVLHE-NGHMPFEKRKYLLEYFVDRGYVFLCP--------EEMYEWVDGRGGKRGRKRKVP 266
+ V+LD+G N+G YTL A GF+V+ E ++ N+Q I + + R E V ++ L+ + L + NIG G QG+ ++ S VR D I T LD + +P+F +G+ +KMDVEG+E V+ GG F + D+ VL E H K +L +F +R Y+ P + YEW +KRK P
Sbjct: 177 DAVLLDIGANIGVYTLTAAKLGFKVIAVEPLKINVQRICKSL-RAGNFTENVTVVRSALSNVLQKVNLGIVINNIG-GSYVLQGKNINKAKSTLVRGKYPDVIWTTRLDDIM--------QLPAFDSGK-VIIKMDVEGYENKVLSGGVHFFDRMDVPTVLMEWTYHRKAMSGKEILTFFENRNYIAYAPVKNIQLDLKRSYEW---PADILWKKRKTP 381
BLAST of EWM24875.1 vs. NCBI_GenBank
Match: gi|1027023874|ref|XP_016604665.1| (FkbM family methyltransferase [Spizellomyces punctatus DAOM BR117] >gi|907090137|gb|KNC96625.1| FkbM family methyltransferase [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 84.3445 bits (207), Expect = 7.814e-15 Identity = 55/156 (35.26%), Postives = 78/156 (50.00%), Query Frame = 0
Query: 59 RDELVMLDVGGNLGAYTLCLATAGFRVLTFEAMRRNIQAIREGICRNSGLKERVILLEKGLAEKEETCTLVVDKENIGDGITRCQGQGVSLGSEE--VREDAIQVTTLDRALYCPQSSRDAVPSFYTGRPAALKMDVEGFEMLVVQGGQGFLNTSD 212
+D LD+GGN+G YT+ A G RV FE M +N IR +C N L V GL + + C ++ EN G+GI +C +++ VR D + + TLD + Q R A G +KMDVEGFE V++GG+ L +D
Sbjct: 133 QDRATFLDIGGNVGWYTVTAAAHGHRVAVFEPMPQNEYLIRRSLCANRDLARHVDYYAMGLGAQPDECRIISHNENHGNGILQCGEDSKKPVADQHGVRAD-VSIHTLDGIV---QDDRRA------GEFGVMKMDVEGFESEVLKGGEKSLFATD 278 The following BLAST results are available for this feature:
BLAST of EWM24875.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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