EWM24882.1, cds5794 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24882.1 vs. NCBI_GenBank
Match: gi|553180093|ref|XP_005853344.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >gi|422295716|gb|EKU23015.1| short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >gi|585106507|gb|EWM24882.1| short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 608.986 bits (1569), Expect = 0.000e+0 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0 Query: 1 MATFASTPVTTGKQSKAGGERQPGLEHEMNPKPEVIRSNYEGANKLAGTVAIITGADSGIGRAVAVHFAREGAKGITIAYLDEHKDAQETKRMVEEEGSQAILIAGDVGDNEHCKSIVELTLKTFGELSCLVNNAAEQHICNDFLDITRKQLECTFRTNILSYFFMAQAALPHLKAGSSIINTTSVTAYKGMPQLIDYSSAKGAIVSFTRSLAINLANKDIRVNGVAPGPIWTPLIPATFPEEAKVEKFGQEVPMERSAQPSEVAPSYVFLASPDGSFFNGQVLHPNGGTVING 294 MATFASTPVTTGKQSKAGGERQPGLEHEMNPKPEVIRSNYEGANKLAGTVAIITGADSGIGRAVAVHFAREGAKGITIAYLDEHKDAQETKRMVEEEGSQAILIAGDVGDNEHCKSIVELTLKTFGELSCLVNNAAEQHICNDFLDITRKQLECTFRTNILSYFFMAQAALPHLKAGSSIINTTSVTAYKGMPQLIDYSSAKGAIVSFTRSLAINLANKDIRVNGVAPGPIWTPLIPATFPEEAKVEKFGQEVPMERSAQPSEVAPSYVFLASPDGSFFNGQVLHPNGGTVING Sbjct: 1 MATFASTPVTTGKQSKAGGERQPGLEHEMNPKPEVIRSNYEGANKLAGTVAIITGADSGIGRAVAVHFAREGAKGITIAYLDEHKDAQETKRMVEEEGSQAILIAGDVGDNEHCKSIVELTLKTFGELSCLVNNAAEQHICNDFLDITRKQLECTFRTNILSYFFMAQAALPHLKAGSSIINTTSVTAYKGMPQLIDYSSAKGAIVSFTRSLAINLANKDIRVNGVAPGPIWTPLIPATFPEEAKVEKFGQEVPMERSAQPSEVAPSYVFLASPDGSFFNGQVLHPNGGTVING 294
BLAST of EWM24882.1 vs. NCBI_GenBank
Match: gi|752560021|ref|WP_041231250.1| (NAD(P)-dependent oxidoreductase [Deinococcus peraridilitoris]) HSP 1 Score: 379.407 bits (973), Expect = 1.044e-129 Identity = 182/274 (66.42%), Postives = 219/274 (79.93%), Query Frame = 0 Query: 20 ERQPGLEHEMNPKPEVIRSNYEGANKLAGTVAIITGADSGIGRAVAVHFAREGAKGITIAYLDEHKDAQETKRMVEEEGSQAILIAGDVGDNEHCKSIVELTLKTFGELSCLVNNAAEQHICNDFLDITRKQLECTFRTNILSYFFMAQAALPHLKAGSSIINTTSVTAYKGMPQLIDYSSAKGAIVSFTRSLAINLANKDIRVNGVAPGPIWTPLIPATFPEEAKVEKFGQEVPMERSAQPSEVAPSYVFLASPDGSFFNGQVLHPNGGTVIN 293 +RQPGLE EM P+P I+ +Y+ A KL G VA+ITG DSGIGRAVAVHFAREGA + I YL+E++DA+ETKR+VE EG + + IAGDVGD + C+S VE T+ G L CLVNNAAEQH DI+ +QLE TFRTNI YF+MA+AALPHL+AGS+IINT+SVT YKG PQL+DYSS KGAIV+FTRSL++NL K IRVNGVAPGPIWTPLIPATF E+ KV +FG VPM+R QP+EVAP +VFLAS D S+ +GQ+LHPNGG V+N Sbjct: 18 DRQPGLETEMTPRPIYIKDSYKAAGKLEGKVALITGGDSGIGRAVAVHFAREGAD-VCIMYLNENQDAEETKRLVEAEGRRCLAIAGDVGDEQFCQSAVERTVSELGRLDCLVNNAAEQHPQESLTDISSEQLEKTFRTNIFGYFYMAKAALPHLQAGSTIINTSSVTDYKGSPQLLDYSSTKGAIVAFTRSLSMNLVEKGIRVNGVAPGPIWTPLIPATFSED-KVAEFGASVPMKRPGQPAEVAPCFVFLASDDSSYISGQMLHPNGGEVVN 289
BLAST of EWM24882.1 vs. NCBI_GenBank
Match: gi|429129886|gb|AFZ66901.1| (dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein [Deinococcus peraridilitoris DSM 19664]) HSP 1 Score: 379.407 bits (973), Expect = 1.838e-129 Identity = 182/274 (66.42%), Postives = 219/274 (79.93%), Query Frame = 0 Query: 20 ERQPGLEHEMNPKPEVIRSNYEGANKLAGTVAIITGADSGIGRAVAVHFAREGAKGITIAYLDEHKDAQETKRMVEEEGSQAILIAGDVGDNEHCKSIVELTLKTFGELSCLVNNAAEQHICNDFLDITRKQLECTFRTNILSYFFMAQAALPHLKAGSSIINTTSVTAYKGMPQLIDYSSAKGAIVSFTRSLAINLANKDIRVNGVAPGPIWTPLIPATFPEEAKVEKFGQEVPMERSAQPSEVAPSYVFLASPDGSFFNGQVLHPNGGTVIN 293 +RQPGLE EM P+P I+ +Y+ A KL G VA+ITG DSGIGRAVAVHFAREGA + I YL+E++DA+ETKR+VE EG + + IAGDVGD + C+S VE T+ G L CLVNNAAEQH DI+ +QLE TFRTNI YF+MA+AALPHL+AGS+IINT+SVT YKG PQL+DYSS KGAIV+FTRSL++NL K IRVNGVAPGPIWTPLIPATF E+ KV +FG VPM+R QP+EVAP +VFLAS D S+ +GQ+LHPNGG V+N Sbjct: 38 DRQPGLETEMTPRPIYIKDSYKAAGKLEGKVALITGGDSGIGRAVAVHFAREGAD-VCIMYLNENQDAEETKRLVEAEGRRCLAIAGDVGDEQFCQSAVERTVSELGRLDCLVNNAAEQHPQESLTDISSEQLEKTFRTNIFGYFYMAKAALPHLQAGSTIINTSSVTDYKGSPQLLDYSSTKGAIVAFTRSLSMNLVEKGIRVNGVAPGPIWTPLIPATFSED-KVAEFGASVPMKRPGQPAEVAPCFVFLASDDSSYISGQMLHPNGGEVVN 309
BLAST of EWM24882.1 vs. NCBI_GenBank
Match: gi|1175916632|gb|OQW37338.1| (NAD(P)-dependent oxidoreductase [Nitrospira sp. SG-bin1]) HSP 1 Score: 371.703 bits (953), Expect = 9.400e-127 Identity = 181/271 (66.79%), Postives = 210/271 (77.49%), Query Frame = 0 Query: 24 GLEHEMNPKPEVIRSNYEGANKLAGTVAIITGADSGIGRAVAVHFAREGAKGITIAYLDEHKDAQETKRMVEEEGSQAILIAGDVGDNEHCKSIVELTLKTFGELSCLVNNAAEQHICNDFLDITRKQLECTFRTNILSYFFMAQAALPHLKAGSSIINTTSVTAYKGMPQLIDYSSAKGAIVSFTRSLAINLANKDIRVNGVAPGPIWTPLIPATFPEEAKVEKFGQEVPMERSAQPSEVAPSYVFLASPDGSFFNGQVLHPNGGTVING 294 GLE EM PKP+ + G KL+ VA+ITG DSGIGRAVA+ FAREGA + +AYLDEHKDA+ET+R+VE+EG + ILI GDVGD+EHC V L+ G L L+NNAA+Q + IT QLE TFRTNI SYFFMAQAALPHL G+SIINTTSVTAYKG PQL+DYSS KGAIVSFTRSL++ LA + IRVN VAPGPIWTPLIP+TFP E KV FG +VP++R+ QP EVAPSYVFLAS D S+ GQVLHPNGGTV+NG Sbjct: 16 GLESEMTPKPKAEDQKHHGKGKLSQKVAVITGGDSGIGRAVAIAFAREGAD-LAVAYLDEHKDAEETRRLVEQEGRRCILIPGDVGDHEHCVKAVGTVLRELGRLDILINNAAQQQPQDSLDKITPDQLERTFRTNIFSYFFMAQAALPHLTEGASIINTTSVTAYKGSPQLLDYSSTKGAIVSFTRSLSMALAERKIRVNAVAPGPIWTPLIPSTFPPE-KVATFGSDVPLKRAGQPEEVAPSYVFLASEDASYMTGQVLHPNGGTVVNG 284
BLAST of EWM24882.1 vs. NCBI_GenBank
Match: gi|953245704|emb|CUS39765.1| (Uncharacterized oxidoreductase YhdF [Candidatus Nitrospira nitrificans]) HSP 1 Score: 371.318 bits (952), Expect = 1.349e-126 Identity = 180/271 (66.42%), Postives = 213/271 (78.60%), Query Frame = 0 Query: 24 GLEHEMNPKPEVIRSNYEGANKLAGTVAIITGADSGIGRAVAVHFAREGAKGITIAYLDEHKDAQETKRMVEEEGSQAILIAGDVGDNEHCKSIVELTLKTFGELSCLVNNAAEQHICNDFLDITRKQLECTFRTNILSYFFMAQAALPHLKAGSSIINTTSVTAYKGMPQLIDYSSAKGAIVSFTRSLAINLANKDIRVNGVAPGPIWTPLIPATFPEEAKVEKFGQEVPMERSAQPSEVAPSYVFLASPDGSFFNGQVLHPNGGTVING 294 G+E EM P+P+V + G KL G +A+ITG DSGIGRAVAV FAREGA + IAYLDEHKDA+ET+RMVE+EG + ILI GDVG +EHC S+V L FG L LVNNAA+Q + +IT QLE TFRTNI SYFFMAQ+A+PHL G++IINTTSVTAYKG PQL+DYSS KGAIVSFTRSLA++L+ K IRVN VAPGP+WTPLIP+TFP + KV FG +VPM+R+ QP E+AP YVFLA+ D S+ GQVLHPNGGTVING Sbjct: 16 GIESEMTPRPKVENRAHHGTGKLNGKIALITGGDSGIGRAVAVAFAREGAD-LAIAYLDEHKDAEETQRMVEQEGRRCILIPGDVGSHEHCMSVVRTVLAEFGHLDVLVNNAAQQEPQDSLENITPAQLERTFRTNIFSYFFMAQSAVPHLGEGANIINTTSVTAYKGSPQLLDYSSTKGAIVSFTRSLALSLSEKKIRVNAVAPGPVWTPLIPSTFPPD-KVATFGSDVPMKRAGQPEEIAPCYVFLATQDASYMTGQVLHPNGGTVING 284
BLAST of EWM24882.1 vs. NCBI_GenBank
Match: gi|922782179|ref|WP_053379881.1| (NAD(P)-dependent oxidoreductase [Nitrospira moscoviensis] >gi|922307947|gb|ALA58770.1| putative oxidoreductase YhdF [Nitrospira moscoviensis]) HSP 1 Score: 370.548 bits (950), Expect = 2.392e-126 Identity = 181/275 (65.82%), Postives = 212/275 (77.09%), Query Frame = 0 Query: 20 ERQPGLEHEMNPKPEVIRSNYEGANKLAGTVAIITGADSGIGRAVAVHFAREGAKGITIAYLDEHKDAQETKRMVEEEGSQAILIAGDVGDNEHCKSIVELTLKTFGELSCLVNNAAEQHICNDFLDITRKQLECTFRTNILSYFFMAQAALPHLKAGSSIINTTSVTAYKGMPQLIDYSSAKGAIVSFTRSLAINLANKDIRVNGVAPGPIWTPLIPATFPEEAKVEKFGQEVPMERSAQPSEVAPSYVFLASPDGSFFNGQVLHPNGGTVING 294 ERQPG+E +M P+P+ Y G++KL VAIITG DSGIGRAVAV FA+EGA I + YL+EHKDAQETKRMVE+EG + + +AGDVGD C++ VE T++ G L LVNNAAEQH IT QLE TFRTN+ SYFFM +AALPHL G++IIN+TSVTAYKG P L+DYSS KGAIVSFTRSL+ +LA K IRVN VAPGPIWTPLIP+TFPEE KV FG +VP+ R +P EVAPSYVFLAS D S+ GQVLHPNGGTV+NG Sbjct: 14 ERQPGIESDMTPRPKAAARPYRGSSKLQDKVAIITGGDSGIGRAVAVLFAKEGAD-IALVYLNEHKDAQETKRMVEQEGRRCLALAGDVGDEPFCRASVERTVRELGRLDVLVNNAAEQHPQETIEKITADQLERTFRTNMFSYFFMTKAALPHLGEGAAIINSTSVTAYKGSPHLLDYSSTKGAIVSFTRSLSQSLAGKQIRVNAVAPGPIWTPLIPSTFPEE-KVTSFGADVPLGRPGEPEEVAPSYVFLASDDASYMTGQVLHPNGGTVVNG 286
BLAST of EWM24882.1 vs. NCBI_GenBank
Match: gi|1072778775|ref|WP_069968638.1| (NAD(P)-dependent oxidoreductase [Desertifilum sp. IPPAS B-1220] >gi|1070569592|gb|OEJ73752.1| NAD(P)-dependent oxidoreductase [Desertifilum sp. IPPAS B-1220]) HSP 1 Score: 370.548 bits (950), Expect = 2.788e-126 Identity = 177/275 (64.36%), Postives = 219/275 (79.64%), Query Frame = 0 Query: 20 ERQPGLEHEMNPKPEVIRSNYEGANKLAGTVAIITGADSGIGRAVAVHFAREGAKGITIAYLDEHKDAQETKRMVEEEGSQAILIAGDVGDNEHCKSIVELTLKTFGELSCLVNNAAEQHICNDFLDITRKQLECTFRTNILSYFFMAQAALPHLKAGSSIINTTSVTAYKGMPQLIDYSSAKGAIVSFTRSLAINLANKDIRVNGVAPGPIWTPLIPATFPEEAKVEKFGQEVPMERSAQPSEVAPSYVFLASPDGSFFNGQVLHPNGGTVING 294 +RQPGLE EM P+PE S Y+GANKL+G VA+ITG DSGIGRAVA+ +A+EGA + IAYL+EH+DA++T+ +VE EG +AI +AGD+GD CK +VE T+K FG+L LVNNAAEQH +I+ +QLE TFRTNI S F++ +AA+PHLK GS+IINTTSVTAY+G LIDYSS KGAIV+FTRSL+ +L K IRVNGVAPGPIWTPLIPATF EE KV FG++VPM+R+ QP EVA YVFLAS D S+ +GQ+LHPNGG ++NG Sbjct: 14 DRQPGLESEMTPQPESGESTYQGANKLSGKVALITGGDSGIGRAVAILYAKEGAN-VAIAYLNEHEDAKKTQELVEAEGRKAITLAGDIGDESFCKKLVEETVKAFGQLDILVNNAAEQHPVESIEEISAEQLERTFRTNIFSMFYLTKAAMPHLKEGSAIINTTSVTAYQGNSSLIDYSSTKGAIVAFTRSLSQSLVKKGIRVNGVAPGPIWTPLIPATFSEE-KVASFGKQVPMKRAGQPEEVATCYVFLASNDSSYISGQILHPNGGNIVNG 286
BLAST of EWM24882.1 vs. NCBI_GenBank
Match: gi|1060048059|ref|WP_069074585.1| (NAD(P)-dependent oxidoreductase [Nostoc sp. KVJ20] >gi|1059442493|gb|ODG99834.1| NAD(P)-dependent oxidoreductase [Nostoc sp. KVJ20]) HSP 1 Score: 370.548 bits (950), Expect = 3.676e-126 Identity = 178/272 (65.44%), Postives = 216/272 (79.41%), Query Frame = 0 Query: 23 PGLEHEMNPKPEVIRSNYEGANKLAGTVAIITGADSGIGRAVAVHFAREGAKGITIAYLDEHKDAQETKRMVEEEGSQAILIAGDVGDNEHCKSIVELTLKTFGELSCLVNNAAEQHICNDFLDITRKQLECTFRTNILSYFFMAQAALPHLKAGSSIINTTSVTAYKGMPQLIDYSSAKGAIVSFTRSLAINLANKDIRVNGVAPGPIWTPLIPATFPEEAKVEKFGQEVPMERSAQPSEVAPSYVFLASPDGSFFNGQVLHPNGGTVING 294 PG+E EM PKP+ + Y G+ KL VA+ITGADSGIGRAVA+ FA+EGA + I YL+EH DA+ETK +VE++G +A+ IAGD+GD C+ ++ T+ FG+L L+NNAAEQH +IT KQLE TFRTNI S FFM +AAL HL+AGSSIINTTSVTAYKG PQL+DYSS KGAIV+FTRSL+ NL +K IRVN VAPGPIWTPLIP+TFPEE KVE FG++VPM+R+ QP EVAPSYV+LAS DGS+ +GQVLH NGG V+NG Sbjct: 24 PGVESEMTPKPKADDAQYRGSGKLQDKVALITGADSGIGRAVAIAFAKEGAD-VAILYLNEHDDAKETKHLVEKQGRRAVTIAGDIGDETFCQQAIQQTVDEFGKLDVLINNAAEQHPKESIEEITEKQLERTFRTNIFSMFFMTKAALKHLQAGSSIINTTSVTAYKGNPQLLDYSSTKGAIVAFTRSLSQNLVSKGIRVNAVAPGPIWTPLIPSTFPEE-KVETFGKQVPMQRAGQPEEVAPSYVYLASDDGSYVSGQVLHVNGGEVVNG 293
BLAST of EWM24882.1 vs. NCBI_GenBank
Match: gi|939724940|ref|WP_054957057.1| (short-chain dehydrogenase [Paenibacillus sp. FF9]) HSP 1 Score: 368.237 bits (944), Expect = 2.414e-125 Identity = 178/274 (64.96%), Postives = 215/274 (78.47%), Query Frame = 0 Query: 21 RQPGLEHEMNPKPEVIRSNYEGANKLAGTVAIITGADSGIGRAVAVHFAREGAKGITIAYLDEHKDAQETKRMVEEEGSQAILIAGDVGDNEHCKSIVELTLKTFGELSCLVNNAAEQHICNDFLDITRKQLECTFRTNILSYFFMAQAALPHLKAGSSIINTTSVTAYKGMPQLIDYSSAKGAIVSFTRSLAINLANKDIRVNGVAPGPIWTPLIPATFPEEAKVEKFGQEVPMERSAQPSEVAPSYVFLASPDGSFFNGQVLHPNGGTVING 294 ++PG E EMNP+PE S Y+ A KL G VA+ITG DSGIGRAVAV++A+EGA + I YL+EHKDA+ETK+ VE+EG + ILI GD+GD+ CK V+ T+ G+L LVNNAAEQH N DIT++QLE TFRTNIL FFM QAA+PHL GSSIINT S+TAY+G P+LIDYSS KGAIVSFTRSL++NLA K IRVNGVAPGPIWTPLIP+TFP E +V KFG PM+R QP E+AP+YV+LAS D S+ +GQ++H NGG VING Sbjct: 17 QRPGKETEMNPRPEFESSQYQAAGKLEGKVALITGGDSGIGRAVAVYYAKEGAD-VAIVYLNEHKDAEETKQQVEQEGRKCILIPGDIGDDAFCKESVKQTVDQLGKLDILVNNAAEQHPQNSIEDITKEQLERTFRTNILGMFFMTQAAMPHLGQGSSIINTASITAYRGSPKLIDYSSTKGAIVSFTRSLSMNLAEKGIRVNGVAPGPIWTPLIPSTFPAE-EVSKFGASQPMKRPGQPEELAPAYVYLASSDSSYVSGQIIHVNGGEVING 288
BLAST of EWM24882.1 vs. NCBI_GenBank
Match: gi|736360619|ref|WP_034386148.1| (NAD(P)-dependent oxidoreductase [Deinococcus sp. YIM 77859]) HSP 1 Score: 368.237 bits (944), Expect = 3.053e-125 Identity = 181/282 (64.18%), Postives = 216/282 (76.60%), Query Frame = 0 Query: 16 KAGGERQ---PGLEHEMNPKPEVIRSNYEGANKLAGTVAIITGADSGIGRAVAVHFAREGAKGITIAYLDEHKDAQETKRMVEEEGSQAILIAGDVGDNEHCKSIVELTLKTFGELSCLVNNAAEQHICNDFLDITRKQLECTFRTNILSYFFMAQAALPHLKAGSSIINTTSVTAYKGMPQLIDYSSAKGAIVSFTRSLAINLANKDIRVNGVAPGPIWTPLIPATFPEEAKVEKFGQEVPMERSAQPSEVAPSYVFLASPDGSFFNGQVLHPNGGTVING 294 +A GE Q PG + EMN KP IR +Y G+ KL G VA+ITG DSGIGRAVAVHFAREGA + + YLDEH+DAQ T +VE EG +A+ I+GD+GD + C+ V+ TL+ G L LVNNAAEQH DIT +QLE TFRTNI F++ QAALPHLK G++IINTTSVTAYKG PQL+DYSS KGAIV+FTRSL+ +LA + IRVN VAPGPIWTPLIP+TF E KVE FGQ+VP++R QP+EVAP+YVFLAS D S+ GQVLHPNGG V+NG Sbjct: 23 QASGETQAQEPGHQSEMNQKPITIRDDYRGSGKLTGKVALITGGDSGIGRAVAVHFAREGAD-VAVVYLDEHEDAQSTVALVEGEGRRALAISGDIGDPQFCQQAVQQTLQELGRLDILVNNAAEQHPQPSITDITPEQLERTFRTNIFGMFYLTQAALPHLKQGATIINTTSVTAYKGSPQLLDYSSTKGAIVAFTRSLSQSLAEQGIRVNAVAPGPIWTPLIPSTF-EPQKVESFGQDVPLKRPGQPAEVAPAYVFLASEDSSYMTGQVLHPNGGEVVNG 302 The following BLAST results are available for this feature:
BLAST of EWM24882.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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