EWM24889.1, cds5786 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24889.1 vs. NCBI_GenBank
Match: gi|553189474|ref|XP_005855009.1| (thioredoxin-like protein 1 [Nannochloropsis gaditana CCMP526] >gi|422294049|gb|EKU21349.1| thioredoxin-like protein 1 [Nannochloropsis gaditana CCMP526] >gi|585106516|gb|EWM24889.1| thioredoxin-like protein 1 [Nannochloropsis gaditana]) HSP 1 Score: 365.155 bits (936), Expect = 7.344e-128 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 Query: 1 MSSEGPPAPPPPPSNEIVDITDKIAKPECFVLNADPKYPWENLFMGDDRLQLRSDTDEQLILHLVFSEAVKVHSLNLVAPEMEAAPATVKLYLNKTSFSFDDAENIEPTQVLELTEEDYKAEKVTLLKFVKFQRVSSLTIFVENNNGADYTALSMLRLFGTPLQGTDVSKIQKQPAQG 178 MSSEGPPAPPPPPSNEIVDITDKIAKPECFVLNADPKYPWENLFMGDDRLQLRSDTDEQLILHLVFSEAVKVHSLNLVAPEMEAAPATVKLYLNKTSFSFDDAENIEPTQVLELTEEDYKAEKVTLLKFVKFQRVSSLTIFVENNNGADYTALSMLRLFGTPLQGTDVSKIQKQPAQG Sbjct: 1 MSSEGPPAPPPPPSNEIVDITDKIAKPECFVLNADPKYPWENLFMGDDRLQLRSDTDEQLILHLVFSEAVKVHSLNLVAPEMEAAPATVKLYLNKTSFSFDDAENIEPTQVLELTEEDYKAEKVTLLKFVKFQRVSSLTIFVENNNGADYTALSMLRLFGTPLQGTDVSKIQKQPAQG 178
BLAST of EWM24889.1 vs. NCBI_GenBank
Match: gi|299472516|emb|CBN77301.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 185.267 bits (469), Expect = 1.315e-56 Identity = 87/164 (53.05%), Postives = 112/164 (68.29%), Query Frame = 0 Query: 10 PPPPSNEIVDITDKIAKPECFVLNADPKYPWENLFMGDDRLQLRSDTDEQLILHLVFSEAVKVHSLNLVAPEMEAAPATVKLYLNKTSFSFDDAENIEPTQVLELTEEDYKAEKVTLLKFVKFQRVSSLTIFVENNNGADYTALSMLRLFGTPLQGTDVSKIQK 173 P E+ DITD + K +C+ LN WENLF GDDRL L+SD DEQL+LH+ F E VK+HS++ VAP + AP TVKLYLN+ S F D +++ P Q LELT+ED A ++LKFVKFQRVS L+IFV +NNGA+ + LS LR FGTP+ T + +K Sbjct: 16 PKASDLEVRDITDLVCKADCYCLNQLSGATWENLFQGDDRLMLQSDADEQLLLHVGFMETVKLHSIDFVAPSDDTAPLTVKLYLNRNSMGFSDTDDMAPAQTLELTKEDLVAGSASVLKFVKFQRVSGLSIFVADNNGAEQSCLSSLRFFGTPVATTKMGDFKK 179
BLAST of EWM24889.1 vs. NCBI_GenBank
Match: gi|695430512|ref|XP_009530460.1| (hypothetical protein PHYSODRAFT_334858 [Phytophthora sojae] >gi|348673212|gb|EGZ13031.1| hypothetical protein PHYSODRAFT_334858 [Phytophthora sojae]) HSP 1 Score: 174.096 bits (440), Expect = 5.924e-52 Identity = 81/155 (52.26%), Postives = 115/155 (74.19%), Query Frame = 0 Query: 19 DITDKIAKPECFVLNADPKYPWENLFMGDDRLQLRSDTDEQLILHLVFSEAVKVHSLNLVAPEMEAAPATVKLYLNKTSFSFDDAENIEPTQVLELTEEDYKAEKVTLLKFVKFQRVSSLTIFVENNNGADYTALSMLRLFGTPLQGTDVSKIQK 173 D+ + I+ +C+ LN DP P+ NLFMGD+ LQL+SD DEQL+L++ F +AVKV SLN+VAP+ E AP +KL++N+ + F DA ++EPTQ +EL EED E L+FVKFQRV S+T+FVE NNGA+ TA+S L+ FG L GT++++++K Sbjct: 45 DLKEAISTKDCYCLNEDPNKPFGNLFMGDETLQLKSDADEQLMLYIEFQDAVKVFSLNIVAPQGEEAPRVIKLFVNRPNLGFSDAGDVEPTQTIELKEEDLLPENDVELRFVKFQRVKSITVFVEENNGAEETAISSLKFFGERLAGTNMNELKK 199
BLAST of EWM24889.1 vs. NCBI_GenBank
Match: gi|301102347|ref|XP_002900261.1| (thioredoxin-like protein, putative [Phytophthora infestans T30-4] >gi|262102413|gb|EEY60465.1| thioredoxin-like protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 170.629 bits (431), Expect = 4.257e-51 Identity = 80/155 (51.61%), Postives = 112/155 (72.26%), Query Frame = 0 Query: 19 DITDKIAKPECFVLNADPKYPWENLFMGDDRLQLRSDTDEQLILHLVFSEAVKVHSLNLVAPEMEAAPATVKLYLNKTSFSFDDAENIEPTQVLELTEEDYKAEKVTLLKFVKFQRVSSLTIFVENNNGADYTALSMLRLFGTPLQGTDVSKIQK 173 D+ + I+ +C+ LN DP P+ NLF GDD L L+SD DEQL+L+L F +AVK+ SLN+VAP+ E AP +KLY+N+ + F DA ++EPTQ +EL EED E L+FVKFQRV S+++FVE N GA+ T LS L+ FG PL GT++++++K Sbjct: 15 DLKESISTKDCYCLNEDPNKPFRNLFAGDDSLVLKSDADEQLMLYLEFQDAVKIFSLNIVAPQGEEAPRVIKLYVNRPNLGFSDAGDVEPTQTIELKEEDLLPENDVELRFVKFQRVKSVSVFVEENYGAEETVLSSLKFFGEPLAGTNMNELKK 169
BLAST of EWM24889.1 vs. NCBI_GenBank
Match: gi|568027194|gb|ETM01159.1| (hypothetical protein L917_02222 [Phytophthora parasitica]) HSP 1 Score: 170.244 bits (430), Expect = 6.816e-51 Identity = 80/155 (51.61%), Postives = 112/155 (72.26%), Query Frame = 0 Query: 19 DITDKIAKPECFVLNADPKYPWENLFMGDDRLQLRSDTDEQLILHLVFSEAVKVHSLNLVAPEMEAAPATVKLYLNKTSFSFDDAENIEPTQVLELTEEDYKAEKVTLLKFVKFQRVSSLTIFVENNNGADYTALSMLRLFGTPLQGTDVSKIQK 173 D+ + I+ +C+ LN +P P+ NLFMGDD L L+SD DEQL+L+L F +AVKV SLN+VAP+ E AP +KLY+N+ F DA +++PTQ +EL +ED E L+FVKFQRV SLT+FVE NNGA+ T +S L+ FG L GT++++++K Sbjct: 14 DLQEAISTKDCYCLNENPNKPFRNLFMGDDSLVLKSDADEQLMLYLEFQDAVKVFSLNIVAPQGEEAPRVIKLYVNRPHLGFSDAGDVDPTQTIELKDEDLLPENDVELRFVKFQRVKSLTVFVEENNGAEETVISSLKFFGERLAGTNMNELKK 168
BLAST of EWM24889.1 vs. NCBI_GenBank
Match: gi|675181589|ref|XP_008899679.1| (hypothetical protein PPTG_07263 [Phytophthora parasitica INRA-310] >gi|566031894|gb|ETI54805.1| hypothetical protein F443_02444 [Phytophthora parasitica P1569] >gi|567969580|gb|ETK94664.1| hypothetical protein L915_02330 [Phytophthora parasitica] >gi|567997984|gb|ETL48063.1| hypothetical protein L916_02288 [Phytophthora parasitica] >gi|568057686|gb|ETM54340.1| hypothetical protein L914_02315 [Phytophthora parasitica] >gi|568100355|gb|ETN15054.1| hypothetical protein PPTG_07263 [Phytophthora parasitica INRA-310] >gi|570335623|gb|ETO83571.1| hypothetical protein F444_02431 [Phytophthora parasitica P1976] >gi|570959663|gb|ETP24642.1| hypothetical protein F441_02395 [Phytophthora parasitica CJ01A1] >gi|570995858|gb|ETP52605.1| hypothetical protein F442_02411 [Phytophthora parasitica P10297] >gi|970642596|gb|KUF84218.1| Thioredoxin protein 1 [Phytophthora nicotianae] >gi|970653177|gb|KUF91696.1| hypothetical protein AM588_10004095 [Phytophthora nicotianae]) HSP 1 Score: 169.859 bits (429), Expect = 1.187e-50 Identity = 80/155 (51.61%), Postives = 112/155 (72.26%), Query Frame = 0 Query: 19 DITDKIAKPECFVLNADPKYPWENLFMGDDRLQLRSDTDEQLILHLVFSEAVKVHSLNLVAPEMEAAPATVKLYLNKTSFSFDDAENIEPTQVLELTEEDYKAEKVTLLKFVKFQRVSSLTIFVENNNGADYTALSMLRLFGTPLQGTDVSKIQK 173 D+ + I+ +C+ LN +P P+ NLFMGDD L L+SD DEQL+L+L F +AVKV SLN+VAP+ E AP +KLY+N+ F DA +++PTQ +EL +ED E L+FVKFQRV SLT+FVE NNGA+ T +S L+ FG L GT++++++K Sbjct: 15 DLQEAISTKDCYCLNENPNKPFRNLFMGDDSLVLKSDADEQLMLYLEFQDAVKVFSLNIVAPQGEEAPRVIKLYVNRPHLGFSDAGDVDPTQTIELKDEDLLPENDVELRFVKFQRVKSLTVFVEENNGAEETVISSLKFFGERLAGTNMNELKK 169
BLAST of EWM24889.1 vs. NCBI_GenBank
Match: gi|301089473|ref|XP_002895034.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262103701|gb|EEY61753.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 167.933 bits (424), Expect = 5.713e-50 Identity = 79/155 (50.97%), Postives = 111/155 (71.61%), Query Frame = 0 Query: 19 DITDKIAKPECFVLNADPKYPWENLFMGDDRLQLRSDTDEQLILHLVFSEAVKVHSLNLVAPEMEAAPATVKLYLNKTSFSFDDAENIEPTQVLELTEEDYKAEKVTLLKFVKFQRVSSLTIFVENNNGADYTALSMLRLFGTPLQGTDVSKIQK 173 D+ + I+ +C+ LN DP P+ NLF GDD L L+SD DEQL+L+L F +AVK+ SLN+VAP+ E AP +KLY+N+ + F DA ++EPTQ +EL EED E L+FVKFQRV S+++FVE N GA+ T LS L+ FG L GT++++++K Sbjct: 15 DLKESISTKDCYCLNEDPNKPFRNLFAGDDSLVLKSDADEQLMLYLEFQDAVKIFSLNIVAPQGEEAPRVIKLYVNRPNLGFSDAGDVEPTQTIELKEEDLLPENDVELRFVKFQRVKSVSVFVEENYGAEETVLSSLKFFGETLAGTNMNELKK 169
BLAST of EWM24889.1 vs. NCBI_GenBank
Match: gi|568027195|gb|ETM01160.1| (hypothetical protein, variant 1 [Phytophthora parasitica]) HSP 1 Score: 165.236 bits (417), Expect = 4.328e-49 Identity = 79/146 (54.11%), Postives = 105/146 (71.92%), Query Frame = 0 Query: 19 DITDKIAKPECFVLNADPKYPWENLFMGDDRLQLRSDTDEQLILHLVFSEAVKVHSLNLVAPEMEAAPATVKLYLNKTSFSFDDAENIEPTQVLELTEEDYKAEKVTLLKFVKFQRVSSLTIFVENNNGADYTALSMLRLFGTPLQ 164 D+ + I+ +C+ LN +P P+ NLFMGDD L L+SD DEQL+L+L F +AVKV SLN+VAP+ E AP +KLY+N+ F DA +++PTQ +EL +ED E L+FVKFQRV SLT+FVE NNGA+ T +S L+ FGT LQ Sbjct: 14 DLQEAISTKDCYCLNENPNKPFRNLFMGDDSLVLKSDADEQLMLYLEFQDAVKVFSLNIVAPQGEEAPRVIKLYVNRPHLGFSDAGDVDPTQTIELKDEDLLPENDVELRFVKFQRVKSLTVFVEENNGAEETVISSLKFFGTLLQ 159
BLAST of EWM24889.1 vs. NCBI_GenBank
Match: gi|675181591|ref|XP_008899680.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|566031895|gb|ETI54806.1| hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|567969581|gb|ETK94665.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567997985|gb|ETL48064.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568057687|gb|ETM54341.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568100356|gb|ETN15055.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|570335624|gb|ETO83572.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570959664|gb|ETP24643.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >gi|570995859|gb|ETP52606.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297]) HSP 1 Score: 164.851 bits (416), Expect = 5.930e-49 Identity = 79/146 (54.11%), Postives = 105/146 (71.92%), Query Frame = 0 Query: 19 DITDKIAKPECFVLNADPKYPWENLFMGDDRLQLRSDTDEQLILHLVFSEAVKVHSLNLVAPEMEAAPATVKLYLNKTSFSFDDAENIEPTQVLELTEEDYKAEKVTLLKFVKFQRVSSLTIFVENNNGADYTALSMLRLFGTPLQ 164 D+ + I+ +C+ LN +P P+ NLFMGDD L L+SD DEQL+L+L F +AVKV SLN+VAP+ E AP +KLY+N+ F DA +++PTQ +EL +ED E L+FVKFQRV SLT+FVE NNGA+ T +S L+ FGT LQ Sbjct: 15 DLQEAISTKDCYCLNENPNKPFRNLFMGDDSLVLKSDADEQLMLYLEFQDAVKVFSLNIVAPQGEEAPRVIKLYVNRPHLGFSDAGDVDPTQTIELKDEDLLPENDVELRFVKFQRVKSLTVFVEENNGAEETVISSLKFFGTLLQ 160
BLAST of EWM24889.1 vs. NCBI_GenBank
Match: gi|953486315|emb|CEG49646.1| (Thioredoxin-like protein [Plasmopara halstedii]) HSP 1 Score: 163.696 bits (413), Expect = 2.435e-48 Identity = 75/155 (48.39%), Postives = 113/155 (72.90%), Query Frame = 0 Query: 19 DITDKIAKPECFVLNADPKYPWENLFMGDDRLQLRSDTDEQLILHLVFSEAVKVHSLNLVAPEMEAAPATVKLYLNKTSFSFDDAENIEPTQVLELTEEDYKAEKVTLLKFVKFQRVSSLTIFVENNNGADYTALSMLRLFGTPLQGTDVSKIQK 173 D+ D I+ +C+ LN DP P+ NLF G++ L L+SD DEQL+L++ F +AVK+ S+N+VAP+ + AP +KL++N+ + F DA ++E TQ +EL +ED E L+FVKFQRV+S++IFVE NNGAD T +S L+ FG PL GT++++++K Sbjct: 15 DLKDAISIKDCYCLNEDPNKPFRNLFAGNETLVLKSDADEQLLLYIEFQDAVKLFSINIVAPQTDEAPRVIKLFVNRPNLGFSDATDVEATQTIELKKEDLVPENDIELRFVKFQRVTSISIFVEENNGADETIISSLKFFGEPLAGTNMNELKK 169 The following BLAST results are available for this feature:
BLAST of EWM24889.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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