EWM24891.1, cds5780 (CDS) Nannochloropsis gaditana

Overview
NameEWM24891.1
Unique Namecds5780
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:861035..861073 +
Alignment locationCM002466.1:861204..861255 +
Alignment locationCM002466.1:861516..861739 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24891.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100116g6.9019.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:861035..861073 +
CM002466.1supercontigCM002466.1:861204..861255 +
CM002466.1supercontigCM002466.1:861516..861739 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM24891.1 vs. NCBI_GenBank
Match: gi|585106518|gb|EWM24891.1| (hypothetical protein Naga_100116g6 [Nannochloropsis gaditana])

HSP 1 Score: 209.149 bits (531), Expect = 1.700e-68
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 
Query:    1 MDTYADRHTTIDMIKGQRERDQKVSPLLQAVRYGGGVDAHARARQTSRFEGRDGDGKDLAAGIGWKPLAREEGILDPTHEGDGDIADLSFLVRDGIELRGLVNS 104
            MDTYADRHTTIDMIKGQRERDQKVSPLLQAVRYGGGVDAHARARQTSRFEGRDGDGKDLAAGIGWKPLAREEGILDPTHEGDGDIADLSFLVRDGIELRGLVNS
Sbjct:    1 MDTYADRHTTIDMIKGQRERDQKVSPLLQAVRYGGGVDAHARARQTSRFEGRDGDGKDLAAGIGWKPLAREEGILDPTHEGDGDIADLSFLVRDGIELRGLVNS 104
The following BLAST results are available for this feature:
BLAST of EWM24891.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106518|gb|EWM24891.1|1.700e-68100.00hypothetical protein Naga_100116g6 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5795rna5795Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications