EWM24901.1, cds5772 (CDS) Nannochloropsis gaditana

Overview
NameEWM24901.1
Unique Namecds5772
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:843697..844574 +
Alignment locationCM002466.1:844678..845251 +
Alignment locationCM002466.1:845473..845525 +
Alignment locationCM002466.1:845658..846168 +
Alignment locationCM002466.1:846275..846478 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24901.1
Productnadh:ubiquinone oxidoreductase complex i intermediate-associated protein 30
Orig transcript idgnl|cribi|Naga_100116g13.9029.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:843697..844574 +
CM002466.1supercontigCM002466.1:844678..845251 +
CM002466.1supercontigCM002466.1:845473..845525 +
CM002466.1supercontigCM002466.1:845658..846168 +
CM002466.1supercontigCM002466.1:846275..846478 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like
IPR016040NAD(P)-bd_dom
IPR013857NADH-UbQ_OxRdtase-assoc_prot30
Homology
BLAST of EWM24901.1 vs. NCBI_GenBank
Match: gi|585106528|gb|EWM24901.1| (nadh:ubiquinone oxidoreductase complex i intermediate-associated protein 30 [Nannochloropsis gaditana])

HSP 1 Score: 1498.8 bits (3879), Expect = 0.000e+0
Identity = 739/739 (100.00%), Postives = 739/739 (100.00%), Query Frame = 0
Query:    1 MLSSLSGVRCVFLVLLFICLSGGVVAFLPASVLPTRESSFPSRLHAENKHNGDNKPGSNGLNTLFSPPSMTNPFEALGKQLTFFFEKLTGGTDTNSAMASRALPPPPPSVRRTGGPVSVVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASPGHGLLDYISGIDVTNAATLSSGKVPAVLKEACHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFETPEDVAKWQRLDDVIMGGQSSSSLELDREKGYATYTGSLVVEGGGFCGTRASGGDASVDLSGFDGVTLRVRGDGHRYKLNLKTTETLASENVYQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQPSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLEEIALYRSRRPSLVLVSSAGAERNAKVETEEDRKTEIPIVMLNPGGILNWKYRAETYLRASPLPYTILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRDEAADANAMTGVGRRPRTTAVTALELFQPLVADKDRAVSGTSGLLPFPEAVDPPQEVSPERAKEILNDPRVKAQQDRDRALVESGALQKGQGGGGRYVGVCAVRICRGSVPDGASARVHVQNSVIYSNNALSFNEPKTKSLPDIPLCFGRKKVMPSKCSLCPF 739
            MLSSLSGVRCVFLVLLFICLSGGVVAFLPASVLPTRESSFPSRLHAENKHNGDNKPGSNGLNTLFSPPSMTNPFEALGKQLTFFFEKLTGGTDTNSAMASRALPPPPPSVRRTGGPVSVVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASPGHGLLDYISGIDVTNAATLSSGKVPAVLKEACHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFETPEDVAKWQRLDDVIMGGQSSSSLELDREKGYATYTGSLVVEGGGFCGTRASGGDASVDLSGFDGVTLRVRGDGHRYKLNLKTTETLASENVYQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQPSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLEEIALYRSRRPSLVLVSSAGAERNAKVETEEDRKTEIPIVMLNPGGILNWKYRAETYLRASPLPYTILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRDEAADANAMTGVGRRPRTTAVTALELFQPLVADKDRAVSGTSGLLPFPEAVDPPQEVSPERAKEILNDPRVKAQQDRDRALVESGALQKGQGGGGRYVGVCAVRICRGSVPDGASARVHVQNSVIYSNNALSFNEPKTKSLPDIPLCFGRKKVMPSKCSLCPF
Sbjct:    1 MLSSLSGVRCVFLVLLFICLSGGVVAFLPASVLPTRESSFPSRLHAENKHNGDNKPGSNGLNTLFSPPSMTNPFEALGKQLTFFFEKLTGGTDTNSAMASRALPPPPPSVRRTGGPVSVVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASPGHGLLDYISGIDVTNAATLSSGKVPAVLKEACHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFETPEDVAKWQRLDDVIMGGQSSSSLELDREKGYATYTGSLVVEGGGFCGTRASGGDASVDLSGFDGVTLRVRGDGHRYKLNLKTTETLASENVYQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQPSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLEEIALYRSRRPSLVLVSSAGAERNAKVETEEDRKTEIPIVMLNPGGILNWKYRAETYLRASPLPYTILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRDEAADANAMTGVGRRPRTTAVTALELFQPLVADKDRAVSGTSGLLPFPEAVDPPQEVSPERAKEILNDPRVKAQQDRDRALVESGALQKGQGGGGRYVGVCAVRICRGSVPDGASARVHVQNSVIYSNNALSFNEPKTKSLPDIPLCFGRKKVMPSKCSLCPF 739          
BLAST of EWM24901.1 vs. NCBI_GenBank
Match: gi|553184867|ref|XP_005854158.1| (nadh:ubiquinone oxidoreductase complex i intermediate-associated protein 30 [Nannochloropsis gaditana CCMP526] >gi|422294900|gb|EKU22200.1| nadh:ubiquinone oxidoreductase complex i intermediate-associated protein 30 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1356.27 bits (3509), Expect = 0.000e+0
Identity = 672/672 (100.00%), Postives = 672/672 (100.00%), Query Frame = 0
Query:    1 MLSSLSGVRCVFLVLLFICLSGGVVAFLPASVLPTRESSFPSRLHAENKHNGDNKPGSNGLNTLFSPPSMTNPFEALGKQLTFFFEKLTGGTDTNSAMASRALPPPPPSVRRTGGPVSVVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASPGHGLLDYISGIDVTNAATLSSGKVPAVLKEACHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFETPEDVAKWQRLDDVIMGGQSSSSLELDREKGYATYTGSLVVEGGGFCGTRASGGDASVDLSGFDGVTLRVRGDGHRYKLNLKTTETLASENVYQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQPSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLEEIALYRSRRPSLVLVSSAGAERNAKVETEEDRKTEIPIVMLNPGGILNWKYRAETYLRASPLPYTILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRDEAADANAMTGVGRRPRTTAVTALELFQPLVADKDRAVSGTSGLLPFPEAVDPPQEVSPERAKEILNDPRVKAQQDRDRALVESGALQKGQGGGGR 672
            MLSSLSGVRCVFLVLLFICLSGGVVAFLPASVLPTRESSFPSRLHAENKHNGDNKPGSNGLNTLFSPPSMTNPFEALGKQLTFFFEKLTGGTDTNSAMASRALPPPPPSVRRTGGPVSVVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASPGHGLLDYISGIDVTNAATLSSGKVPAVLKEACHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFETPEDVAKWQRLDDVIMGGQSSSSLELDREKGYATYTGSLVVEGGGFCGTRASGGDASVDLSGFDGVTLRVRGDGHRYKLNLKTTETLASENVYQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQPSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLEEIALYRSRRPSLVLVSSAGAERNAKVETEEDRKTEIPIVMLNPGGILNWKYRAETYLRASPLPYTILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRDEAADANAMTGVGRRPRTTAVTALELFQPLVADKDRAVSGTSGLLPFPEAVDPPQEVSPERAKEILNDPRVKAQQDRDRALVESGALQKGQGGGGR
Sbjct:    1 MLSSLSGVRCVFLVLLFICLSGGVVAFLPASVLPTRESSFPSRLHAENKHNGDNKPGSNGLNTLFSPPSMTNPFEALGKQLTFFFEKLTGGTDTNSAMASRALPPPPPSVRRTGGPVSVVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASPGHGLLDYISGIDVTNAATLSSGKVPAVLKEACHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFETPEDVAKWQRLDDVIMGGQSSSSLELDREKGYATYTGSLVVEGGGFCGTRASGGDASVDLSGFDGVTLRVRGDGHRYKLNLKTTETLASENVYQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQPSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLEEIALYRSRRPSLVLVSSAGAERNAKVETEEDRKTEIPIVMLNPGGILNWKYRAETYLRASPLPYTILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRDEAADANAMTGVGRRPRTTAVTALELFQPLVADKDRAVSGTSGLLPFPEAVDPPQEVSPERAKEILNDPRVKAQQDRDRALVESGALQKGQGGGGR 672          
BLAST of EWM24901.1 vs. NCBI_GenBank
Match: gi|299115397|emb|CBN74227.1| (NADH:ubiquinone oxidoreductase complex I [Ectocarpus siliculosus])

HSP 1 Score: 357.066 bits (915), Expect = 2.013e-110
Identity = 258/599 (43.07%), Postives = 336/599 (56.09%), Query Frame = 0
Query:   77 LGKQLTFFFEKLTGGTDTNSAMASRALPPPPPSVRRTGGPVSVVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASPGHGLLDYISGIDVTNAATLSSGKVPAVLKEACHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFETPEDVAK--------WQRLDDVIMGGQSSSSLE-------LDREKG--YATYTGSLVVEGGGFCGTRASGGDASVDLSGFDGVTLRVRGDGHRYKLNLKTTETL--ASENVYQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQ--PSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLEEIALYRSRRPSLVLVSSAGAERNAKVETEEDRKTEIPIVMLNPGGILNWKYRAETYLRASPLPYTILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRDEAADANAMTGVGRRPRTTAVTALELFQPLVADKDRAVSGTSG----LLPFPEAVDPPQEVSPERAKEILNDPRVKAQ 650
            LG      F   T       A  S A     PS R     V +V G TG+ G+++V+ALL++  DVV A R++    E++ AS        +PG   L   SG+DV + ATL   K  A+      VV ALGP  G +         G +SE VDF+GV   I+A   A+  +++G    G   A G+ E   R L     P D           WQ LDDVIMGG+SSS+ +       L+R+ G  +  + G+LV EGGGFCGT     D   D +G+DG+ +RVRGDG RYK  LK    L   +E  YQA FDT+         G W  + +PF  F  V RN VD+ A  +   P+    +SLGLV SRF FN   NP Y  GAF L L EI+LY+  RP+ VLVSSA AER  ++ TEE+RK +IPIV LNPGGILNWKY+AET LR S L + ++R  GL+ E   GDE  + +LQ GQGDT++GR++R+++G  VAAAL+S YSAGKT E+RRDEA DA      G+ P  T+     LF+ LV D+DR+++   G    L PF    DPP  V+ ER +EILNDPRVKA+
Sbjct:   56 LGDWFKQAFTPQTAAAVKKKAGTSTAKKAKAPSGRGCTDAV-LVLGGTGKTGQKVVEALLKQKRDVVVASRSKESAAELYDAS--------TPG---LFVQSGVDVRDEATL---KNKALFDGVTQVVSALGPRFGEE---------GSSSEAVDFQGVQSAIEA---AEAFLEQG---DGSSAAPGDQE---RVLV---APGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIK--DMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTV--------KGEWIEVDLPFESFVAVKRNYVDFNAPRVNEGPAGGKMLSLGLVLSRFGFNEYPNPKYTAGAFQLDLMEISLYKKPRPNFVLVSSASAERYHRL-TEEERKNDIPIVALNPGGILNWKYKAETSLRKSSLRHCVVRATGLIAEGKEGDE--SVRLQMGQGDTLSGRVSREEVGSTVAAALSSSYSAGKTFELRRDEAEDAT-----GKTPDFTS-----LFRGLVLDEDRSLASAGGASLPLPPFAIVQDPPPPVTEERKQEILNDPRVKAR 595          
BLAST of EWM24901.1 vs. NCBI_GenBank
Match: gi|926793365|ref|XP_013905156.1| (hypothetical protein MNEG_1822 [Monoraphidium neglectum] >gi|761976281|gb|KIZ06137.1| hypothetical protein MNEG_1822 [Monoraphidium neglectum])

HSP 1 Score: 347.436 bits (890), Expect = 4.366e-107
Identity = 249/572 (43.53%), Postives = 323/572 (56.47%), Query Frame = 0
Query:   88 LTGGTDTNSAMASRALPPPPPSVRRTGGPVSVVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALS-GATPASPGHGLLDYISGIDVTNAATLSSGKVPAVLKEACHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFETPEDVAKWQRLDDVIMGGQSSSSLELDREKGYATYTGSLVVEGGGFCGTRASGGDASVDLSGFDGVTLRVRGDGHRYKLNLKTTETLAS-ENVYQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQPSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSL-EEIALYRSRRPSLVLVSSAGAERNAKV-ETEEDRKTEIPIVMLNPGGILNWKYRAETYLRASPLPYTILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRDEAADANAMTGVGRRPRTTAVTALELFQPLVADKDRAVSGTSGLLPFPEAVDPPQEVSPERAKEILNDPRVKAQQDRDR 655
            + G     SA  ++A P  PP + R      +V GATGRAGR IVQ LLR G  VVAAVR   K +EVF A  L  G      G G+L   +G+DVT+ +TL+    P +      VV ALG V G  P G FG+  G+T E V+ KG+  V+ A+               K+  A ++   +  L    T ED+  W+RLDDVIMGG SSS L    +   A + G LVVEGGGFCG R       +DLS FDG+ +RV+GDG  +K N+KT +   + E+ YQA FDT          G W T+ +P+H F PV R + D +  PL+   +A   LGLV SRFEFN+  NP Y PG F L++   ++ YR  RP L+++SSAG ERNA + +  E RK +IPIV LNPGG+LNWK+ AE   RAS  PY+++R  GL    A   EP    L+A QGD+I+G+++R ++ L VAAALASP +A KT E+RR+EA DA   T  G R  T       LF  L  D  R      GL PFP AV PP   + ER  EIL DPRV+  +DR +
Sbjct:    1 MGGAATAPSAAVTQAEPEVPPPLPREN--AVLVLGATGRAGRLIVQELLRSGRTVVAAVRTADKASEVFSALELQEGRQAEGKGDGILFVQAGVDVTDESTLT----PDLFAGVTQVVSALGGVTGRLPDGTFGYLDGMTPEAVEAKGMANVVAAM---------------KQHLAPQIRTTQEVL-PMRTAEDLEAWERLDDVIMGGSSSSGLTALEDGSGAAWKGDLVVEGGGFCGARTR--KLGLDLSQFDGLRMRVKGDGQTFKFNIKTADQEDTPESTYQATFDT-------SEEGDWTTVHLPWHSFVPVKRAQSDPQGEPLR--GEAISKLGLVLSRFEFNKMPNPRYHPGPFELTIGGGLSAYRDPRPQLLVISSAGVERNAIIGDDAEARKKDIPIVQLNPGGVLNWKFEAECVARASGFPYSVVRCTGLDDGSAAAAEPRL--LEADQGDSISGKVSRAEVALVVAAALASPDAANKTFELRRNEAVDAKGKT-TGPRQLT------RLFLKLALDSHR---WRVGLQPFPRAVPPPAPPTEERKAEILADPRVQEVRDRQQ 527          
BLAST of EWM24901.1 vs. NCBI_GenBank
Match: gi|552842731|ref|XP_005850646.1| (hypothetical protein CHLNCDRAFT_140649 [Chlorella variabilis] >gi|307110308|gb|EFN58544.1| hypothetical protein CHLNCDRAFT_140649 [Chlorella variabilis])

HSP 1 Score: 342.428 bits (877), Expect = 9.404e-104
Identity = 240/534 (44.94%), Postives = 303/534 (56.74%), Query Frame = 0
Query:  119 VVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASAL-SGATPASPGHGLLDYISGIDVTNAATLSSGKVPAVLKEACHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFETPEDVAKWQRLDDVIMGGQSSSSLELDREKGYATYTGSLVVEGGGFCGTRASGGDASVDLSGFDGVTLRVRGD-GHRYKLNLKT-TETLASENVYQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQPSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLE-EIALYRSRRPSLVLVSSAGAERNAKV-ETEEDRKTEIPIVMLNPGGILNWKYRAETYLRASPLPYTILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRDEAADANAMTGVGRRPRTTAVTALELFQPLVADKDRAVSGTSGLLPFPEAVDPPQEVSPERAKEILNDPRV 647
            +VFGATGR GR +VQ LL +G  VVAAVR+  +  +VFG + L  G  P   G G+L   SG+D+TN  TLS    P + +    VV A+G V G    G  G+   +TSE VD  GV  V  A                        E R   + R  + ED+ KWQRLDDVIMGG+SSS L    +   A +TG L+V+GGGFCG R       +DLS +DG+ LRV+ D G  +KLN+KT  ++   E+ YQA FDT P        G W ++ IP+H F  V R R    A P+ P+       GLVYSRF+FN   NP Y  G F L++E  I  YR  RP L++VSSAG ERNAKV   EE RK +IPIV LNPGG+LN KY  E  +RAS L Y++LRP GL  E     EP    L+AGQGD I+GR++R++L   V AAL +P +AGKT+E+RR E+ADA          + +    L LF  L A +DR +    GL PFP  V PP  VS ER KEIL+D RV
Sbjct:  105 LVFGATGRMGRTVVQELLAQGRTVVAAVRSPGRARDVFGKAGLVEGRQPG--GAGILFVESGVDITNPDTLS----PLMFEGVSQVVTAVGAVFGRTAEGQMGYLDDMTSERVDAAGVANVAAA----------------AAACLDPAERRSEGVVRMRSAEDLQKWQRLDDVIMGGKSSSGLAAAEDGSGAVWTGELIVDGGGFCGARTK--PEPLDLSAYDGIALRVKSDGGQTFKLNIKTEAQSEVPEDTYQATFDTNP-------GGDWTSVFIPWHEFVLVKRARTVPGAPPIDPAR--IRQFGLVYSRFDFNGFPNPRYRAGKFELAIEGGIRAYRDARPQLLMVSSAGVERNAKVGNDEEARKKDIPIVQLNPGGVLNHKYTGEAAVRASGLAYSVLRPTGLTNES----EPGDFLLEAGQGDRISGRISREELSTVVVAALGTPAAAGKTLELRRQESADAAG-------KKMSQQDKLRLF--LGAAEDR-LRQRVGLEPFPAPVAPPAPVSEERKKEILSDVRV 591          
BLAST of EWM24901.1 vs. NCBI_GenBank
Match: gi|545365034|ref|XP_005647522.1| (CIA30-domain-containing protein [Coccomyxa subellipsoidea C-169] >gi|384249497|gb|EIE22978.1| CIA30-domain-containing protein [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 332.028 bits (850), Expect = 3.975e-101
Identity = 227/537 (42.27%), Postives = 300/537 (55.87%), Query Frame = 0
Query:  119 VVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASPGHGLLDYISGIDVTNAATLSSGKVPAVLKEACHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFETPEDVAKWQRLDDVIMGGQSSSSLELDREKGYATYTGSLVVEGGGFCGTRASGGDASVDLSGFDGVTLRVRGDGHRYKLNLKTTETL-ASENVYQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQPSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLE-EIALYRSRRPSLVLVSSAGAERNAKV-ETEEDRKTEIPIVMLNPGGILNWKYRAETYLRASPLPYTILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRDEAADANAMTGVGRRPRTTAVTALE-LFQPLVADKDRAVSGTSGLLPFPEAVDPPQEVSPERAKEILNDPRVKAQQ 651
            +VFG+TG+ GR+IV  LL EG  VVAA R+  K + VF    L     A    G+L     +D+TN  +L+    P +      V  A+GP+ G  P G  G+   +TSE VD +GV  +  A+   + V K+ A    K +          T+    +  D+ KWQRLDDVIMGGQSSS+L L  +   A ++G L++EGGGFCG R    D  ++L  FDGV L V GDG  +KLNLKT +     E  +QA FDTLP        G   T+ IP+  F  V R RVD  A  L PSS     LGLV SRFEFN  ANP Y  G FSL ++  I  +R  RP++V V+SAG ERNAK+ + E  RK +IPIV LNPGG+LN KY  E  +R++ +PY ++R  GL  E    DE +   L+A QGD I+G+++R+++     AAL +  S GKT+EIRR EAA        G R + ++   LE LF   V D+ R       L P P  V PP+  +PER  EIL+D RV+A Q
Sbjct:   10 LVFGSTGKLGRQIVTQLLEEGRTVVAAARDAQKADTVFEELGLRVGYQADKSKGILALEGDVDITNPESLNR---PELWAGVSQVACAVGPIFGRLPDGKMGYLDDMTSERVDAQGVANIASAL---QSVFKDKA----KSRETA-------TVLPMTSEADLVKWQRLDDVIMGGQSSSALTLAADGSGAVFSGDLIIEGGGFCGARTKALD--LNLGEFDGVALEVEGDGQTFKLNLKTADQEDLPECTFQATFDTLP--------GRSTTVYIPWREFVAVKRARVDPAAPKLDPSS--VRQLGLVLSRFEFNGLANPNYWAGKFSLKIKGGIQGFREPRPAIVFVTSAGVERNAKIGDDETARKADIPIVQLNPGGVLNHKYAGEWAVRSAGIPYAVVRSTGLTSE----DEDTDFVLEASQGDRISGKISRKEVARVAVAALGTAASVGKTVEIRRSEAA--------GDRGKASSQPDLERLFLTAVQDRHRP---RINLAPLPAPVPPPKPPTPERTAEILSDERVQAAQ 502          
BLAST of EWM24901.1 vs. NCBI_GenBank
Match: gi|302829274|ref|XP_002946204.1| (hypothetical protein VOLCADRAFT_102805 [Volvox carteri f. nagariensis] >gi|300269019|gb|EFJ53199.1| hypothetical protein VOLCADRAFT_102805 [Volvox carteri f. nagariensis])

HSP 1 Score: 301.597 bits (771), Expect = 1.108e-88
Identity = 209/535 (39.07%), Postives = 296/535 (55.33%), Query Frame = 0
Query:  119 VVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVF-----GASALSGATPASPGHGLLDYISGIDVTNAATLSSGKVPAVLKEACHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFETPEDVAKWQRLDDVIMGGQSSSSLELDREKGY---ATYTGSLVVEGGGFCGTRASGGDASVDLSGFDGVTLRVRGDGHRYKLNLKTTETL-ASENVYQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQPSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLEE-IALYRSRRPSLVLVSSAGAERNAKV-ETEEDRKTEIPIVMLNPGGILNWKYRAETYLRASPLPYTILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRDEAADANAMTGVGRRPRTTAVTALELFQPLVADKDRAVSGTSGLLPFPEAVDPPQEVSPERAKEIL 642
            +V GATGR GR +V  LL  G  VVA  R+  K  +V      G   LS         G+L ++  +D+TN  +L   ++   +++   VV+ +G V G  P GGFG   G+TSE V+ +G++ ++  + +              KKA        + +    T E++A W RLDDVIMGG S S L+   E      A + G+LVVEGGGFCG R++     +DL+G+DGV LR+ GDG  +KLN+KT +     E+ YQA FDT+        +G W  + IP+H F PV R + D + APL PS  +   LGLV SRFE+N+  NP Y PG F L +E  I  Y   RP LV++SSAG ERNA + + E  R  +IPIV LNP G LN KY AE  +R+S  PY+++R  G++   +F   P    LQA QGD I G+++R+++   +  A++ P + GKT E+RR+EAA++     +GR+        + LF  L  DK R      GL P P+ V PP  V+ ER +EI+
Sbjct:  101 LVMGATGRLGRRVVAKLLAMGRTVVAGCRSLDKARDVLLGTGEGRMGLSAGFQEGGRPGIL-FLEQVDITNPESLRRSELWEGVQQ---VVLTVGTVFGPLPEGGFGVLDGMTSERVEAEGISSLVSVLREVL-----------PKKAT----RSSQLVLPMRTAEELAVWNRLDDVIMGGSSDSGLQPAPEGAGVAGAVWRGNLVVEGGGFCGARSN--KLGLDLAGYDGVHLRLLGDGQTFKLNIKTIDQEDVPESTYQATFDTV--------SGQWADVYIPWHNFVPVKRAQSDPEGAPLDPSRIS--KLGLVLSRFEYNKMPNPDYKPGPFELLIEGGIHAYNDVRPQLVMISSAGVERNAIIGDDEVKRAADIPIVQLNPNGTLNHKYTAEIAVRSSGYPYSVVRSTGMI--DSFEGGPYL--LQADQGDEIVGQISREEVAECLVMAVSMPEATGKTFELRRNEAAESKGKRPMGRQ------DYVRLFLKLALDKHRW---RVGLQPMPKPVPPPSPVTEERRREIV 591          
BLAST of EWM24901.1 vs. NCBI_GenBank
Match: gi|971517789|dbj|GAQ80379.1| (hypothetical protein KFL_000530070 [Klebsormidium nitens])

HSP 1 Score: 259.996 bits (663), Expect = 1.542e-73
Identity = 191/503 (37.97%), Postives = 260/503 (51.69%), Query Frame = 0
Query:  119 VVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASPGHGLLDYISGIDVTNAATLSSGKVPAV--LKEACHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFE--------TPED---VAKWQRLDDVIMGGQSSSSLELDREKGYATYTGSLVVEGGGFCGTRASGGDASVDLSGFDGVTLRVRGDGHRYKLNLKTTETLASENVYQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQPSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLEEIALYRSRRPSLVLVSSAGAERNAKVETEEDRKTEIPIVMLNPGGILNWKYRAETYLRASPLPYTILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRD---EAADANAMTGVGRRPRTTAVTALELFQP 605
            +V GATG+ GR +V+ LL   ++V+A V +E +  EVF      G T    G+GLL            T   G +  V  LKE    V A+    G + GG         SE+   +G+ +++    D    + EG           E + R++ +F F          P++   +  W RLDDVIMGG S SS +  +E G A + G++ VEGGGF   RA+      DLSGFDG++LRV+GDG RYKLN+K+T   A E  YQA+FDT+         G W  ++IPF RF PVVR RV      L  S    +S  +V SRFE++   N  + PG F L +E I+ Y+  RP  VLVSSA  ER+ +  T E R   IPIV LNPG IL WK  +E  L+AS L Y I+RPCGL  E    D+ +  +L+  QGD ITG+++R +    VAA L S  +   T E+RRD   +  D     G+ RR R   +  +  F P
Sbjct:  136 LVVGATGKLGRLLVKELLDRSYEVIALVASEERAEEVFVKEG--GMTMGRSGNGLL------------TAKVGTLDDVESLKETLKGVDAVVSAAGSRRGG---------SEEELTRGLAQLMRTFAD----LSEGR----------EAQLREQAIFDFRGAPAGDNGAPQNGAALEDWTRLDDVIMGGISDSSFK--QEGGRAIFQGTVRVEGGGFASHRAAL--PKTDLSGFDGISLRVKGDGKRYKLNMKST-VEAPEFTYQASFDTV--------RGQWVDVSIPFDRFRPVVRARVVEDGPKLDTSDIKTIS--VVLSRFEYDGFPNYVFTPGPFRLEIEHISAYKKPRPQFVLVSSAAVERSNRARTPEQRDRSIPIVKLNPGDILTWKLVSEDILKASGLAYAIVRPCGLTEE----DQDTPFELEVAQGDAITGKVSRAEAARVVAATLDSADTVYTTFEVRRDALTKGFDTTDWVGLFRRLRPDVLPGIVAFTP 582          
BLAST of EWM24901.1 vs. NCBI_GenBank
Match: gi|504936141|ref|WP_015123243.1| (NmrA-like family protein [Synechococcus sp. PCC 6312] >gi|427375747|gb|AFY59699.1| NmrA-like family protein [Synechococcus sp. PCC 6312])

HSP 1 Score: 221.09 bits (562), Expect = 4.236e-60
Identity = 171/509 (33.60%), Postives = 251/509 (49.31%), Query Frame = 0
Query:   88 LTGGTDTNSAMASRALPPPPPSVRRTGGPVSVVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASPGHGLLDYISGIDVTNAATLSSGKVPAVLKEACHVVVALGPVGGVQPG-----------GGFGFFPGL---TSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFETPEDVAK--WQRLDDVIMGGQSSSSLELDREKGYATYTGSL-VVEGGGFCGTRASGGDASVDLSGFDGVTLRVRGDGHRYKLNLKTTETLASENV-YQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQPSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLEEIALYRSRR--PSLVLVSSAGAERNAKVETEEDRKTEIPIVMLNP--GGILNWKYRAETYLRASPLPYTILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEI 574
            L G      A  +  LPP    +  T     +V GATG  GR +V  LL + + V A VRN ++ N++ G S LS A  A      L  + G DVT A +L +     +L +   V+  LG +  V+P            G   + P L   T E V+++G+  +++    A+   +  +G+              R +F F  P +     W  LDDV+MGG S S L +      A +TG +     GGF   R       +DLS F+G+ LR++GDG RYK  ++++   A + V Y  +FDT+        A  WQT+ IPF +  PV R + +  A P +P++    SL L+ S+FE++   NP++ PG F+L LE I+ Y      P  ++VSSAGA R    E   D +   PIV L+   GGIL WK+R E  +R S +PYTI+RP  L   +A G +P    L   QGDT+ G+++RQD+      AL  P +  KT+EI
Sbjct:   40 LVGSLSQWPAWLTPFLPPELQPISNTPQSTVLVLGATGNLGRRVVALLLAQQYRVKALVRNPARANDILGTSTLSPAQQAQ-----LTLMVG-DVTQAESLPAD----LLTDVDAVISCLGAI--VRPANPENREAKYTEGTTYYEPALIEATPEQVEYQGIQNLLNL---AQPHFQATSGQ--------------RIIFDFCPPNEANAQLWGALDDVVMGGVSQSGLRILTTS--ALFTGVVSTANSGGFVSIRTKNFQPPLDLSRFEGIQLRLKGDGQRYKFFIRSSP--AWDGVGYAFSFDTV--------ADQWQTLKIPFEQLTPVFRAKRNPAAPPFEPTT--VYSLQLMLSKFEYDGGLNPHFQPGPFALELETISAYLDHHPLPRWIMVSSAGATRPGTPEAATDPR---PIVRLSEQLGGILTWKFRGEELIRQSGIPYTIIRPTALT--EATGQQP----LIMSQGDTLAGKVSRQDVAQLCVQALKWPAAVQKTLEI 496          
BLAST of EWM24901.1 vs. NCBI_GenBank
Match: gi|504967252|ref|WP_015154354.1| (NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 [Chroococcidiopsis thermalis] >gi|428009243|gb|AFY87806.1| NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 [Chroococcidiopsis thermalis PCC 7203])

HSP 1 Score: 217.624 bits (553), Expect = 4.928e-59
Identity = 161/477 (33.75%), Postives = 232/477 (48.64%), Query Frame = 0
Query:  117 VSVVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASPGHGLLDYISGIDVTNAATLSSGKVPAVLKEACHVVVALGPVGGVQP-----GGGFGFFP----GLTSEDVDFKGVTKVIDAVVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFE--TPEDVAKWQRLDDVIMGGQSSSSLELDREKGYATYTGSL-VVEGGGFCGTRASGGDASVDLSGFDGVTLRVRGDGHRYKLNLKTTETLASENVYQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQPSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLEEIALYRSRRPSLVLVSSAGAERNAK--VETEEDRKTEIPIVMLNP--GGILNWKYRAETYLRASPLPYTILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRD 577
            V +V GATG  G+ +VQ LL  G+ V + VR++ K + + G             + +  Y+   D+T   TL+   +  V    C   V + PVGG  P       G  F+     G T E V++ GV  ++ A           A +  ++  +GE     + +F F   TP+    W  +DDV+MGG S S  E+   +G A +TG++     GGF   R     + +DLSG++GVTLRVRGDG RYK  L+T E+      Y  +FDT+        A  W T+ IPF++   V R +    A  +   +    SL L+ S+FE+N + NP + PG F+L +E I  Y S RP  +LVSSAG  R  +  +  EE    E P V LN   GGIL WK+R E  +R S +PYTI+RPC L       +EP    L   QGD I G+++R  +       +  P     T E++ D
Sbjct:   53 VILVAGATGGVGKRVVQRLLERGYQVRSLVRDKDKASSILG-------------NNVETYVG--DITQPETLTPAMMANVRAVICCTAVRVQPVGGDTPDREKYNQGVKFYQPEIVGDTPERVEYLGVKNLVQA-----------AAQYWQQNPSGE-----KIVFDFSQPTPQLQQIWGAVDDVVMGGVSQS--EIRFVEGTALFTGNVSTANSGGFASVRTKNFTSPLDLSGYEGVTLRVRGDGKRYKFFLRT-ESSWDGMAYSYSFDTV--------ANEWITVRIPFNQLTAVFRAKTISDAPAI--DTTKIRSLQLMLSKFEYNGELNPQFSPGGFALQVESIGAYGSARPQFILVSSAGVTRPNRPGINLEE----EPPAVRLNDQLGGILTWKWRGEEAVRESGVPYTIIRPCALT------EEPEIQPLVFDQGDNIKGKVSRDSIAELCVRVVEQPQDGNLTFEVKAD 475          
The following BLAST results are available for this feature:
BLAST of EWM24901.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106528|gb|EWM24901.1|0.000e+0100.00nadh:ubiquinone oxidoreductase complex i intermedi... [more]
gi|553184867|ref|XP_005854158.1|0.000e+0100.00nadh:ubiquinone oxidoreductase complex i intermedi... [more]
gi|299115397|emb|CBN74227.1|2.013e-11043.07NADH:ubiquinone oxidoreductase complex I [Ectocarp... [more]
gi|926793365|ref|XP_013905156.1|4.366e-10743.53hypothetical protein MNEG_1822 [Monoraphidium negl... [more]
gi|552842731|ref|XP_005850646.1|9.404e-10444.94hypothetical protein CHLNCDRAFT_140649 [Chlorella ... [more]
gi|545365034|ref|XP_005647522.1|3.975e-10142.27CIA30-domain-containing protein [Coccomyxa subelli... [more]
gi|302829274|ref|XP_002946204.1|1.108e-8839.07hypothetical protein VOLCADRAFT_102805 [Volvox car... [more]
gi|971517789|dbj|GAQ80379.1|1.542e-7337.97hypothetical protein KFL_000530070 [Klebsormidium ... [more]
gi|504936141|ref|WP_015123243.1|4.236e-6033.60NmrA-like family protein [Synechococcus sp. PCC 63... [more]
gi|504967252|ref|WP_015154354.1|4.928e-5933.75NADH:ubiquinone oxidoreductase complex I intermedi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5787rna5787Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications