EWM24917.1, cds5756 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24917.1 vs. NCBI_GenBank
Match: gi|585106545|gb|EWM24917.1| (fad nad -binding domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 677.552 bits (1747), Expect = 0.000e+0 Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0 Query: 1 MTVEQVDVHNVENNRYIIIGAGPVGLLAAILLVQEKHAAQVSIYEARDGLTTDLHESYPIGVNPRGSRALDRARPDMAIALRMRSSMIDAWRIYAGSRMVAEVPSGLVVGTTRSTINEILYEEVCKHFQEQIKILWSHRLKTLDILERSLIFDVKRPRADEELAQTYEEVTVQGGGARVLACDGVWSVVRGFAEKHVEGFTSNVSPWRVQFRLLFSKPGAGKLVPELEPRYHYVMGGIYLSIIEEDVWVLGLGIGEHLPRQTRELLTATVATPERIAALRAYVTKKAPLAAPFLTAEDLELYFTRKTFGGAMVKVSQLNIGEWAVLLGGKPL 332 MTVEQVDVHNVENNRYIIIGAGPVGLLAAILLVQEKHAAQVSIYEARDGLTTDLHESYPIGVNPRGSRALDRARPDMAIALRMRSSMIDAWRIYAGSRMVAEVPSGLVVGTTRSTINEILYEEVCKHFQEQIKILWSHRLKTLDILERSLIFDVKRPRADEELAQTYEEVTVQGGGARVLACDGVWSVVRGFAEKHVEGFTSNVSPWRVQFRLLFSKPGAGKLVPELEPRYHYVMGGIYLSIIEEDVWVLGLGIGEHLPRQTRELLTATVATPERIAALRAYVTKKAPLAAPFLTAEDLELYFTRKTFGGAMVKVSQLNIGEWAVLLGGKPL Sbjct: 1 MTVEQVDVHNVENNRYIIIGAGPVGLLAAILLVQEKHAAQVSIYEARDGLTTDLHESYPIGVNPRGSRALDRARPDMAIALRMRSSMIDAWRIYAGSRMVAEVPSGLVVGTTRSTINEILYEEVCKHFQEQIKILWSHRLKTLDILERSLIFDVKRPRADEELAQTYEEVTVQGGGARVLACDGVWSVVRGFAEKHVEGFTSNVSPWRVQFRLLFSKPGAGKLVPELEPRYHYVMGGIYLSIIEEDVWVLGLGIGEHLPRQTRELLTATVATPERIAALRAYVTKKAPLAAPFLTAEDLELYFTRKTFGGAMVKVSQLNIGEWAVLLGGKPL 332
BLAST of EWM24917.1 vs. NCBI_GenBank
Match: gi|749524637|ref|WP_040162020.1| (FAD-dependent monooxygenase [bacterium SIT5]) HSP 1 Score: 216.083 bits (549), Expect = 3.336e-63 Identity = 134/314 (42.68%), Postives = 173/314 (55.10%), Query Frame = 0 Query: 17 IIIGAGPVGLLAAILLVQEKHAAQVSIYEARDGLTTDLHESYPIGVNPRGSRALDRARPDMAIALRMRSSMIDAWRIYAGSRMVAEVPSGLVVGTTRSTINEILYEEVCKHFQEQIKILWSHRLKTLDILERSLIFDVKRPRADEELAQTYEEVTVQGGGARVLACDGVWSVVRGFAEKHVEGFTSNVSPWRVQFRLLFSKPGAGKLVPELEPRYHYVMGG--IYLSIIEEDVWVLGLGIGEHLPRQTRELLTATVATPERIAALRAYVTKKAPLAAPFLTAEDLELYFTRKTFGGAMVKVSQLNIGEWAVLLG 328 II+G GPVGL A +LL + V+I EARD SYPIGVNPRG +AL R P + L S + WRIYAG R+VA++ SG VV TTR+ + IL+E + +L H+L LD+ R+L FD VT ARV+A DGVWS R + GF V W + FR+L+S PGA P L+P HY+ GG IY + + + VW G+ ELL+AT ATPER+ AL+ +V + APLAAP LT +D YFTR +F GA+V+ LN GEW VL+G Sbjct: 9 IIVGGGPVGLAAGLLLAAQGR--TVTIAEARDEPVLSDANSYPIGVNPRGKQALRRIDPALEDVLGEHSETVAGWRIYAGGRLVAKLASGTVVSTTRAALTRILWERAST--DPNVTLLTGHKLAGLDVAARTLTFDTAG-----------GPVTWDAAQARVIAADGVWSAARRSLAAQLPGFAPRVDEWGLSFRVLYSAPGAA--APGLDPSLHYIFGGKGIYTATLADGVW--GVVTTAVHGSDEEELLSATAATPERVRALQRFVAQHAPLAAPLLTEQDYADYFTRGSFTGAVVRCPTLNAGEWLVLIG 303
BLAST of EWM24917.1 vs. NCBI_GenBank
Match: gi|673018754|ref|XP_008863338.1| (hypothetical protein H310_01809 [Aphanomyces invadans] >gi|574480252|gb|ETW07245.1| hypothetical protein H310_01809 [Aphanomyces invadans]) HSP 1 Score: 210.305 bits (534), Expect = 8.920e-61 Identity = 119/318 (37.42%), Postives = 179/318 (56.29%), Query Frame = 0 Query: 15 RYIIIGAGPVGLLAAILLVQEKHAAQVSIYEARDGLTTDLHESYPIGVNPRGSRALDRARPDMAIALRMRSSMIDAWRIYAGSRMVAEVPSGLVVGTTRSTINEILYEEVCKHFQEQIKILWSHRLKTLDILERSLIFDVKRPRADEELAQTYEEVTVQGGGARVLACDGVWSVVRGFAEKHVEGFTSNVSPWRVQFRLLFSKPGAGKLVPELEPRYHYVMGGIYLSIIEE---DVWVLGLGIGEHLPRQT-RELLTATVATPERIAALRAYVTKKAPLAAPFLTAEDLELYFTRKTFGGAMVKVSQLNIGEWAVLLG 328 ++II+G GPVG LAA+ L + H V++YE R + TD ESYPIGVNPRG A++ P +A +R ++DAW IYAG R VA++ SG+V GT+R +N L+E H I+ H+LK++D +SL F+V P EV V ARV+ DGV S VR ++ F++ V+PW ++R+LF G+L EL+P HY+ G Y + I+ W L + + P + +L+ T A+ + +A L+A++ AP L +LE YF R+T+ GA+V+ ++ ++ EW VLLG Sbjct: 3 KFIIVGGGPVGCLAALQLAHQGHT--VTVYEGRSYIPTDPSESYPIGVNPRGLHAIESVAPQVAQRIRSEGHVVDAWEIYAGRRRVAKLESGVVYGTSRGNVNLHLWEACQGH--PNIEAHMRHKLKSMDFTAKSLTFEVVFPDTSP------SEVIVDASEARVVGADGVHSTVRASMQRADPSFSAKVTPWANEYRVLFG--AVGQLTAELDPAVHYIFSGGYTATIDNGGTKQWTLVTTVRDSDPDDSVSQLVRETDASADNVAKLKAWIQSIAPQFLQLLPPGELERYFARRTYRGAVVECTKFDVHEWVVLLG 308
BLAST of EWM24917.1 vs. NCBI_GenBank
Match: gi|497131407|ref|WP_009482842.1| (FAD-binding protein [Mobilicoccus pelagius] >gi|377536526|dbj|GAB48944.1| hypothetical protein MOPEL_086_00070 [Mobilicoccus pelagius NBRC 104925]) HSP 1 Score: 209.92 bits (533), Expect = 8.715e-59 Identity = 125/320 (39.06%), Postives = 182/320 (56.88%), Query Frame = 0 Query: 11 VENNRYIIIGAGPVGLLAAILLVQEKHAAQVSIYEARDGLTTDLHESYPIGVNPRGSRALDRARPDMAIALRMRSSMIDAWRIYAGSRMVAEVPSGLVVGTTRSTINEILYEEVCKHFQEQIKILWSHRLKTLDILERSLIFDVKRPRADEELAQTYEEVTVQGGGARVLACDGVWSVVRGFAEKHVEGFTSNVSPWRVQFRLLFSKPGAGKLVPELEPRYHYVM--GGIYLSIIEEDVWVLGLGIGEHLPRQTRELLTATVATPERIAALRAYVTKKAPLAAPFLTAEDLELYFTRKTFGGAMVKVSQLNIGEWAVLLG 328 VE+ I++GAGPVGL A +LL + H +V++YEARD L SYPIGVN RG AL R P + LR +++A+ IY G+R ++ + SG ++ TTR+ + IL+E+ + E + + HRL + D+ R+L FD + ++V V G ARVLA DGVWS R + V GFT V W V+FR+ +S+P A L+P H++ GIY + + + VW + L E + LL +T A+ I ALRA+V + APLAAP LT +D E +F+R FGGA+V ++ EW +L+G Sbjct: 4 VESPHTIVLGAGPVGLAAGLLLTAQGH--RVTVYEARDELLLSDENSYPIGVNTRGQEALRRIDPALLERLREVGEVVEAFHIYKGTRRLSRLESGKLIATTRAFLTRILFEKTQQ--TEGLTYVPGHRLASADLAARTLTFD----------RTSGDQVVVDAGDARVLAADGVWSAARRSMAEQVPGFTPRVGDWGVKFRVAYSRPHAS--ASGLDPAVHHIFTSKGIYTATLRDGVWGVALTAIEG--DEAESLLLSTDASEPNIRALRAHVQEHAPLAAPLLTHDDYEAFFSRDPFGGAVVICPRIAFDEWLLLIG 305
BLAST of EWM24917.1 vs. NCBI_GenBank
Match: gi|1173926887|gb|OQR81007.1| (hypothetical protein ACHHYP_16865 [Achlya hypogyna]) HSP 1 Score: 199.519 bits (506), Expect = 1.524e-56 Identity = 118/317 (37.22%), Postives = 176/317 (55.52%), Query Frame = 0 Query: 16 YIIIGAGPVGLLAAILLVQEKHAAQVSIYEARDGLTTDLHESYPIGVNPRGSRALDRARPDMAIALRMRSSMIDAWRIYAGSRMVAEVPSGLVVGTTRSTINEILYEEVCKHFQEQIKILWSHRLKTLDILERSLIFDVKRPRADEELAQTYEEVTVQGGGARVLACDGVWSVVRGFAEKHVEGFTSNVSPWRVQFRLLFSKPGAGKLVPELEPRYHYVMGGIYLSIIE---EDVWVLGLGI-GEHLPRQTRELLTATVATPERIAALRAYVTKKAPLAAPFLTAEDLELYFTRKTFGGAMVKVSQLNIGEWAVLLG 328 YI++G GPVG AA+ + + H +IYE R + TD +SYPIGVNPRG A+ P +A ++ +IDAW I+AGSR VA+ SG+V GT+R +N L+EE I I +HRL+ +D+ R+L FDV+ D+ T VTV ARV+ DGV S VR F +++PW ++R+LF+ GK+ L P+ HY+ G Y + I+ + W L + + P +L+ +PE +A L+A+V AP P + E+ YFTR+T+ GA+V+ S+L + +W VL+G Sbjct: 6 YIVVGGGPVGCAAALQMAKLGHP--TAIYEGRGSIPTDPEQSYPIGVNPRGLHAIASVAPQIADRVKAEGRVIDAWEIFAGSRRVAKQISGVVFGTSRGNVNLRLWEEA--KATPLITIHMNHRLRHIDVGTRTLTFDVR----DDATGNT-TVVTVDASAARVIGADGVNSKVRDALVAADPTFHVDITPWNNEYRVLFAT--VGKMTAALNPKIHYIFSGGYTATIDNHGQQQWSLVTCLRDQDAPSSPSQLVLEGEPSPENVARLKAWVKSFAPDFLPLVPEEEFTKYFTRRTYRGAIVRCSRLQLEDWVVLVG 311
BLAST of EWM24917.1 vs. NCBI_GenBank
Match: gi|669164282|ref|XP_008617703.1| (hypothetical protein SDRG_13396 [Saprolegnia diclina VS20] >gi|530730644|gb|EQC28886.1| hypothetical protein SDRG_13396 [Saprolegnia diclina VS20]) HSP 1 Score: 196.438 bits (498), Expect = 1.770e-55 Identity = 117/317 (36.91%), Postives = 176/317 (55.52%), Query Frame = 0 Query: 16 YIIIGAGPVGLLAAILLVQEKHAAQVSIYEARDGLTTDLHESYPIGVNPRGSRALDRARPDMAIALRMRSSMIDAWRIYAGSRMVAEVPSGLVVGTTRSTINEILYEEVCKHFQEQIKILWSHRLKTLDILERSLIFDVKRPRADEELAQTYEEVTVQGGGARVLACDGVWSVVRGFAEKHVEGFTSNVSPWRVQFRLLFSKPGAGKLVPELEPRYHYVMGGIYLSIIE---EDVWVLGLGIGE-HLPRQTRELLTATVATPERIAALRAYVTKKAPLAAPFLTAEDLELYFTRKTFGGAMVKVSQLNIGEWAVLLG 328 YI+IG GPVG AA+ L Q H+ V+IYE RD + TD +SYPIGVNPRG A+ P +A ++ +IDAW+IYAG+R VA+ SG+V GT+R +N L H E+I + SH+L+ +D+ + L F+V+ D + VT+ AR++A DGV S VR F ++PW ++R+LF G++ L+P HY+ G Y + I+ + W L + + +L+ + A+PE IA L+A+V AP P + ++ + YF R+T+ GA+V +L + EW VLLG Sbjct: 4 YIVIGGGPVGCAAALQLAQRGHS--VTIYEGRDNIPTDPEQSYPIGVNPRGLHAIASVAPAVAERVKTEGRVIDAWQIYAGARCVAKQLSGVVYGTSRGNVNLHLMNAALAH--ERITVHMSHKLRHMDVGAKHLEFEVR----DGGV------VTIDASSARIVAADGVNSKVRAALVAADPSFGVTITPWANEYRVLFGS--VGQMTDVLDPAVHYIFSGGYTATIDNHGQQQWSLVTCVRDTDAASSPSQLVLSQDASPENIARLKAWVQSFAPAFLPLVPEDEFKKYFERRTYRGAVVACEKLQLSEWVVLLG 304
BLAST of EWM24917.1 vs. NCBI_GenBank
Match: gi|813156751|ref|XP_012201724.1| (hypothetical protein SPRG_06870 [Saprolegnia parasitica CBS 223.65] >gi|641533621|gb|KDO27602.1| hypothetical protein SPRG_06870 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 193.356 bits (490), Expect = 2.864e-54 Identity = 116/317 (36.59%), Postives = 170/317 (53.63%), Query Frame = 0 Query: 16 YIIIGAGPVGLLAAILLVQEKHAAQVSIYEARDGLTTDLHESYPIGVNPRGSRALDRARPDMAIALRMRSSMIDAWRIYAGSRMVAEVPSGLVVGTTRSTINEILYEEVCKHFQEQIKILWSHRLKTLDILERSLIFDVKRPRADEELAQTYEEVTVQGGGARVLACDGVWSVVRGFAEKHVEGFTSNVSPWRVQFRLLFSKPGAGKLVPELEPRYHYVMGGIYLSIIE---EDVWVLGLGIGE-HLPRQTRELLTATVATPERIAALRAYVTKKAPLAAPFLTAEDLELYFTRKTFGGAMVKVSQLNIGEWAVLLG 328 Y +IG GPVG AA+ L Q H+ V+IYE RD + TD +SYPIGVNPRG A+ P +A +R +IDAW+IYAG+R VA+ SG+V GT+R +N L H E+I + +H+L+ +D+ + L F+V+ VT+ AR++A DGV S VR F ++PW ++R+LF GK+ L+P HY+ G Y + I+ + W L + + +L+ + A+PE IA L+A+V AP P + ++ YF R+T+ GA+V L EW VLLG Sbjct: 4 YTVIGGGPVGCAAALQLAQRGHS--VTIYEGRDSIPTDPEQSYPIGVNPRGLHAIASVAPAVAERVRTEGRVIDAWQIYAGARCVAKQLSGVVYGTSRGNVNLHLMNAALAH--ERITVHMNHKLRHMDVGTKRLEFEVR----------DIGIVTIDASSARIVAADGVNSKVRAALVAADPSFGVTITPWANEYRVLFG--AVGKMTDALDPAVHYIFSGGYTATIDNSGQQQWSLVTCVRDTDAATSPSQLVLSQDASPENIARLKAWVQSFAPAFLPLVPEDEFTKYFERRTYRGAVVACENLQRNEWVVLLG 304
BLAST of EWM24917.1 vs. NCBI_GenBank
Match: gi|1057021470|ref|WP_068432758.1| (FAD-binding protein [Piscicoccus intestinalis]) HSP 1 Score: 197.208 bits (500), Expect = 3.461e-54 Identity = 124/321 (38.63%), Postives = 181/321 (56.39%), Query Frame = 0 Query: 12 ENNRYIIIGAGPVGLLAAILLVQEKHAAQVSIYEARDGLTTDLHESYPIGVNPRGSRALDRARPDMAIALRMRSSMIDAWRIYAGSRMVAEVPSGLVVGTTRSTINEILYEEVCKHFQEQIKILWSHRLKTLDILERSLIFDVKRPRADEELAQTYEEVTVQGGGARVLACDGVWSVVRGFAEKHVEGFTSNVSPWRVQFRLLFSKPGAGKLVPELEPRYHYVM--GGIYLSIIEEDVWVLGLGI--GEHLPRQTRELLTATVATPERIAALRAYVTKKAPLAAPFLTAEDLELYFTRKTFGGAMVKVSQLNIGEWAVLLG 328 EN II+GAGPVGL AA+LL H +V++YEA + + SYPIGVNPRG AL R P + ALR + ++ A++I+ G R +A + SG ++ TTR+ +N+IL E V + I + HRL++L + +R+L F A + EV+V ARVLA DGVWS RG + + F + V W VQFR++FS PGA P+L+P H++ GIY + + + W + L G+ + LL + + + ALRA+V + A L AP L+ ED +F RK F GA+V+ ++ EW +LLG Sbjct: 3 ENTPIIIVGAGPVGLAAALLLADGGH--RVTVYEAAEEMDLRSDNSYPIGVNPRGQEALRRIDPALLEALRSQGEVVKAFQIHKGRRRIARLESGTLIATTRAFLNQILMERV--RSTDAIDYVPGHRLESLSVTDRTLTF-----------ATSKGEVSVDAADARVLAADGVWSKARGALAEQMPSFDARVEDWGVQFRVVFSHPGA--EAPDLDPADHHIFTSKGIYTATLSDGRWCVVLTAIHGD----EAEALLLSKDGSDAHVRALRAHVQEHAALTAPLLSEEDYRAFFGRKPFAGAVVRCDRIAFEEWLLLLG 302
BLAST of EWM24917.1 vs. NCBI_GenBank
Match: gi|698817126|ref|XP_009841592.1| (hypothetical protein H257_15260 [Aphanomyces astaci] >gi|574103373|gb|ETV68915.1| hypothetical protein H257_15260 [Aphanomyces astaci]) HSP 1 Score: 192.586 bits (488), Expect = 5.593e-54 Identity = 111/319 (34.80%), Postives = 176/319 (55.17%), Query Frame = 0 Query: 15 RYIIIGAGPVGLLAAILLVQEKHAAQVSIYEARDGLTTDLHESYPIGVNPRGSRALDRARPDMAIALRMRSSMIDAWRIYAGSRMVAEVPSGLVVGTTRSTINEILYEEVCKHFQEQIKILWSHRLKTLDILERSLIFDVKRPRADEELAQTYEEVTVQGGGARVLACDGVWSVVRGFAEKHVEGFTSNVSPWRVQFRLLFSKPGAGKLVPELEPRYHYVMGGIYLSIIEE---DVWVLGLGI--GEHLPRQTRELLTATVATPERIAALRAYVTKKAPLAAPFLTAEDLELYFTRKTFGGAMVKVSQLNIGEWAVLLG 328 ++I++G GPVG LAA+ L + H V++YE R + TD +SYPIGVNPRG A++ PD+A +R +I AW IYAG R VA+ SG+V GT+R +N L+ C I + +HRL+++D ++L F+ D + V V ARV+ DGV S VR + ++ F V+PW ++R+LF + G+ P L+P HY+ G Y + I+ W L + + + +L+ T A+ +A L+A++ AP L+ ++L YF+R+T+ GA+V+ S+ ++ EW VL+G Sbjct: 3 KFIVVGGGPVGCLAALQLAHQGHT--VTLYEGRGHIPTDPSQSYPIGVNPRGLHAIESVAPDVAQRIRSEGHVIAAWEIYAGPRRVAKQVSGVVYGTSRGNVNLHLW-NACTKCPHAITLRMNHRLQSMDFAAKTLTFETT----DGSV------VVVDAADARVVGADGVHSTVRTYMQQADATFFVTVTPWANEYRVLFGR--VGQPAPGLDPSVHYIFSGGYTATIDNGGAKQWTLVTTMRDSDDAGVSSSQLVRETDASEANVAKLKAWIHSIAPAMVDVLSPDELVRYFSRRTYRGAVVECSKFDVDEWVVLVG 306
BLAST of EWM24917.1 vs. NCBI_GenBank
Match: gi|551539062|ref|XP_005758049.1| (hypothetical protein EMIHUDRAFT_107278 [Emiliania huxleyi CCMP1516] >gi|485605511|gb|EOD05620.1| hypothetical protein EMIHUDRAFT_107278 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 190.274 bits (482), Expect = 1.766e-52 Identity = 117/331 (35.35%), Postives = 182/331 (54.98%), Query Frame = 0 Query: 3 VEQVDVHNVENNRYIIIGAGPVGLLAAILLVQEKHAAQVSIYEARDGLTTDLHESYPIGVNPRGSRALDRARPDMAIALRMRSSMIDAWRIYAGS-RMVAEVPSGLVVGTTRSTINEILYEEVCK-HFQEQIKILWSHRLKTLDILERSLIFDVKRPRADEELAQTYEEVTVQGGGARVLACDGVWSVVRGFAEKHVEGFTSNVSPWRVQFRLLFSKPGAGKLVPELEPRYHYVMGGIYLSIIE---EDVWVLGLGIGEHLPRQTRELLTATVATPERIAALRAYVTKKAPLAAPFLTAEDLELYFTRKTFGGAMVKVSQLNIGEWAVLLG 328 ++ D + ++ Y I+G GPVG A+LL K ++YE+R + ESYPIGVN RG L P +A + R +I+AW IY G VA++PSG+V GT+R+ +N IL E + F I ++ ++RL+++ + R L+F+ + + E V G RV+A DG S VR ++ EGF+ V+PW+ +FR++F+ PGA P L+ HY+ G Y + ++ + W +G + PR RELL + + + ALR + ++PL AP ++L +F R+TF GAMV+ S+ N+GEW VLLG Sbjct: 1 MKMTDNKHDDDPHYHIVGGGPVGYATALLLA--KDGILSTVYESRASVVDVPEESYPIGVNARGLHTLGLIDPSLAASCRDTGKIINAWEIYGGGGSKVADLPSGVVYGTSRARVNLILAEAALRPEFASLITVVNNYRLRSVRLAARELVFEERLSGGGKR-----EVVVATGPNGRVVAADGCNSAVRRAVDEQDEGFSCTVTPWKNEFRVIFAPPGAS--APGLDKTVHYIFAGFYAATVDMGGQQTWTCVVGARDGAPRAERELLLSEDPSDANVTALRKLLETRSPLVAPIFGDDELRRFFGRRTFRGAMVQCSRANVGEWLVLLG 322 The following BLAST results are available for this feature:
BLAST of EWM24917.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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