EWM24911.1, cds5750 (CDS) Nannochloropsis gaditana

Overview
NameEWM24911.1
Unique Namecds5750
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:782529..782858 -
Alignment locationCM002466.1:781200..782327 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24911.1
Productfatty acid desaturase
Orig transcript idgnl|cribi|Naga_100092g4.2134.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:782529..782858 -
CM002466.1supercontigCM002466.1:781200..782327 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016717oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR021863DUF3474
IPR005804Fatty_acid_desaturase-1
Homology
BLAST of EWM24911.1 vs. NCBI_GenBank
Match: gi|585106539|gb|EWM24911.1| (fatty acid desaturase [Nannochloropsis gaditana])

HSP 1 Score: 1004.97 bits (2597), Expect = 0.000e+0
Identity = 485/485 (100.00%), Postives = 485/485 (100.00%), Query Frame = 0
Query:    1 MDSLPLTLCHDPYQRPQPYNVSLDRFSNSPFSRMGRGGEKTVTPPSKSFHAHGHSLTASDLSRADAASTISSSVRPSKSLEAMPTEELRKKALQYGHDASADRASLLQILAPYGDILLRTDAPPSLPLAPPPFTLADIKAAVPRHCFERSLTTSFFHLACDLVLVALLGYLATLIGHPDVPTMSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLMDEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKNAVFYKHRAS 485
            MDSLPLTLCHDPYQRPQPYNVSLDRFSNSPFSRMGRGGEKTVTPPSKSFHAHGHSLTASDLSRADAASTISSSVRPSKSLEAMPTEELRKKALQYGHDASADRASLLQILAPYGDILLRTDAPPSLPLAPPPFTLADIKAAVPRHCFERSLTTSFFHLACDLVLVALLGYLATLIGHPDVPTMSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLMDEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKNAVFYKHRAS
Sbjct:    1 MDSLPLTLCHDPYQRPQPYNVSLDRFSNSPFSRMGRGGEKTVTPPSKSFHAHGHSLTASDLSRADAASTISSSVRPSKSLEAMPTEELRKKALQYGHDASADRASLLQILAPYGDILLRTDAPPSLPLAPPPFTLADIKAAVPRHCFERSLTTSFFHLACDLVLVALLGYLATLIGHPDVPTMSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLMDEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKNAVFYKHRAS 485          
BLAST of EWM24911.1 vs. NCBI_GenBank
Match: gi|553190741|ref|XP_005855248.1| (omega-6 fatty acid desaturase delta-12 [Nannochloropsis gaditana CCMP526] >gi|422293805|gb|EKU21105.1| omega-6 fatty acid desaturase delta-12 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 933.324 bits (2411), Expect = 0.000e+0
Identity = 450/452 (99.56%), Postives = 451/452 (99.78%), Query Frame = 0
Query:   34 MGRGGEKTVTPPSKSFHAHGHSLTASDLSRADAASTISSSVRPSKSLEAMPTEELRKKALQYGHDASADRASLLQILAPYGDILLRTDAPPSLPLAPPPFTLADIKAAVPRHCFERSLTTSFFHLACDLVLVALLGYLATLIGHPDVPTMSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLMDEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKNAVFYKHRAS 485
            MGRGGEKTVTPPSK+FHAHGHSLTASDLSRADAASTISSSVRPSKSLEAMPTEELRKKALQYGHDASADRASLLQILAPYGDILLRTDAPPSLPL PPPFTLADIKAAVPRHCFERSLTTSFFHLACDLVLVALLGYLATLIGHPDVPTMSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLMDEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKNAVFYKHRAS
Sbjct:    1 MGRGGEKTVTPPSKTFHAHGHSLTASDLSRADAASTISSSVRPSKSLEAMPTEELRKKALQYGHDASADRASLLQILAPYGDILLRTDAPPSLPLTPPPFTLADIKAAVPRHCFERSLTTSFFHLACDLVLVALLGYLATLIGHPDVPTMSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLMDEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKNAVFYKHRAS 452          
BLAST of EWM24911.1 vs. NCBI_GenBank
Match: gi|1154501347|gb|AQX92134.1| (delta-12 fatty acid desaturase [Nannochloropsis oceanica])

HSP 1 Score: 789.645 bits (2038), Expect = 0.000e+0
Identity = 375/451 (83.15%), Postives = 405/451 (89.80%), Query Frame = 0
Query:   34 MGRGGEKTVTPPSKSFHAHGHSLTASDLSRADAASTISSSVRPSKSLEAMPTEELRKKALQYGHDASADRASLLQILAPYGDILLRTDAPPSLPLAPPPFTLADIKAAVPRHCFERSLTTSFFHLACDLVLVALLGYLATLIGHPDVPTMSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLMDEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKNAVFYKHRA 484
            MGRGGEKTVTP  K              +  DAASTIS +VRPSK++EA+PTEELRKKA QYG + S DR +LL+ LAPYGDILLR DAP SLPLAPPPFTL+DIK AVPRHCFERSL+TS FHL  DL+ VA+LGYLA+L+GH DVP MSRY+LWPLYWYAQGSVLTGVWVIAHECGHQSFSPYE VNN  GW+LHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKE+LMDEILLHSPLANL QIIIMLT+GWMPGYLL+NATGPRKYKG +NSHF+PNSALFSPKDRLDIIWSDIGFF+ALA VV+AC Q+GF TVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRG+EW+WFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHI+KALG YYLKDDTPIWKALWRSYTLCKYVD+++  VFYK RA
Sbjct:    1 MGRGGEKTVTPLRKK-------------TLLDAASTISGTVRPSKAVEALPTEELRKKAAQYGINTSVDRETLLRELAPYGDILLRNDAPKSLPLAPPPFTLSDIKNAVPRHCFERSLSTSLFHLTIDLIQVAVLGYLASLLGHSDVPPMSRYILWPLYWYAQGSVLTGVWVIAHECGHQSFSPYESVNNFFGWLLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEELMDEILLHSPLANLVQIIIMLTIGWMPGYLLLNATGPRKYKGLSNSHFNPNSALFSPKDRLDIIWSDIGFFVALACVVYACVQFGFQTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGSEWTWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIRKALGDYYLKDDTPIWKALWRSYTLCKYVDSEETTVFYKQRA 438          
BLAST of EWM24911.1 vs. NCBI_GenBank
Match: gi|553185754|ref|XP_005854300.1| (omega-6 fatty acid desaturase delta-12 [Nannochloropsis gaditana CCMP526] >gi|422294761|gb|EKU22061.1| omega-6 fatty acid desaturase delta-12 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 610.527 bits (1573), Expect = 0.000e+0
Identity = 287/294 (97.62%), Postives = 291/294 (98.98%), Query Frame = 0
Query:  183 MSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLMDEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKN 476
            MSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLMDEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCK  + +++
Sbjct:    1 MSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLMDEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKTAEEEED 294          
BLAST of EWM24911.1 vs. NCBI_GenBank
Match: gi|298708526|emb|CBJ49159.1| (Fatty acid desaturase [Ectocarpus siliculosus])

HSP 1 Score: 510.375 bits (1313), Expect = 5.134e-176
Identity = 253/458 (55.24%), Postives = 312/458 (68.12%), Query Frame = 0
Query:   34 MGRGGEKTVTPPSKSFHAHGHSLTASDLSRADAASTISSSVRPSKSLEAMPTEELRKKALQYGHDASADRASLLQILAPYGD-ILLRTDAPPSLPLAPPPFTLADIKAAVPRHCFERSLTTSFFHLACDLVLVALLGYLATLIGHPDVPTMSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIK---------EDLMDEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKNAVFYK 481
            MGRGG               H+  A    R   A  I         L    TEEL++ A + G   S  R  LL  L P+   I  R  AP  LPLA PPF  +D++ AVPRHCF+R+L TS  HLA DL++VA  GYLAT I    +P  + +LLWP YW+ QG+ +TGVWV+AHECGHQSFS  + +NNLVG V HSALLVPYHSWRI+H KHHNNTGSC NDEVF PP++         E+ M E++  +PL  +  II ML +GWMPGYL  NATGP KY G   SHF+P + +F  +DR+DI+ SD+GFF+A+AG+ +A    GF TV K+YL+PYMV N +LVLITYLQHTDVF+PHFRG+EW WFRGALCTVDR+FG ++DH  HHI+DTHVCHH+FSKMPFYHAQEA+EHI+  LG Y+L D TPI KALWRS+T C +V+   + VFY+
Sbjct:    1 MGRGGRS------------AHAFAAGRDDRIVRAQHILEG----SVLADNKTEELKQFAEERGLKTSGKREDLLIALHPFSKGIAHRYPAPKPLPLARPPFKFSDVQKAVPRHCFKRNLATSATHLASDLIMVATFGYLATFISGGAIPAWAGWLLWPTYWFVQGTQMTGVWVLAHECGHQSFSESKTINNLVGLVCHSALLVPYHSWRITHAKHHNNTGSCTNDEVFCPPVRTDNGKSPTAEEDMAELVHEAPLVQMFWIIFMLVLGWMPGYLCFNATGPSKYNGLAKSHFNPWAKMFEERDRMDIVTSDLGFFVAVAGICYAVHALGFLTVAKFYLVPYMVTNAYLVLITYLQHTDVFMPHFRGSEWDWFRGALCTVDRTFGPVIDHVIHHIADTHVCHHLFSKMPFYHAQEATEHIRAFLGDYHLSDTTPIPKALWRSFTCCTHVEDVGHTVFYQ 442          
BLAST of EWM24911.1 vs. NCBI_GenBank
Match: gi|340545059|dbj|BAK52809.1| (delta12-fatty acid desaturase [Pinguiochrysis pyriformis])

HSP 1 Score: 478.789 bits (1231), Expect = 1.133e-163
Identity = 238/452 (52.65%), Postives = 305/452 (67.48%), Query Frame = 0
Query:   34 MGRGGEKTVTPPSKSFHAHGHSLTASDLSRADAASTISSSVRPSKSLEAMPTEELRKKALQYGHDASADRASLLQILAPYGDILLRTDAPPSLPLA-PPPFTLADIKAAVPRHCFERSLTTSFFHLACDLVLVALLGYLATLIGHPDVPTMSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLMD---EILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKNAVFYK 481
            MGRGG  + T              A  +S+  A +      R  K +E +   ELRK A   G   + DR  LL+ LAP+   +L      ++PL  P PFT  DIK A+PRHCF+RS   SF HL+ DL +VA + Y A+ I   ++    ++L W  YW+ QG+V TGVWVIAHECGHQ+FSP + +N+ VGWVLHSALLVPYHSWRISH  HH+NTGSCENDEVF P  ++D ++   E++   PL ++ +I +MLT GWMPGYL MNATGP KY+GK   HF+P SALF+ +D  DI+ SD GF LALAG+V+A   +G   V KYY +PYM VN+ LVLITYLQHTDV +PH+RG EW+W RGA CT+DRSF  +L+H FHHI+DTHVCHH+F  MPFYHA+EA++HIKK LG YY+ DDT    A +R+ + C++VD +   VFYK
Sbjct:    1 MGRGGNLSST-------------AAKAVSKRTAETE-----RSMKRMEHLSDAELRKAATLRGLADAGDREELLETLAPFAAGVLDKRTQHTMPLKWPAPFTFGDIKKAIPRHCFQRSAVKSFMHLSVDLAMVAAMAYGASFIDGSELAGWQKFLAWSTYWFWQGAVGTGVWVIAHECGHQAFSPSKFINDSVGWVLHSALLVPYHSWRISHRNHHSNTGSCENDEVFCPARRDDYVEPHGELMRDVPLYSVWRIFLMLTFGWMPGYLFMNATGPHKYEGKTRDHFNPKSALFAKEDYFDIVSSDCGFLLALAGLVYAGYTFGPMAVLKYYWMPYMWVNHWLVLITYLQHTDVNVPHYRGEEWNWLRGACCTIDRSFTPVLNHLFHHITDTHVCHHLFHTMPFYHAEEATKHIKKVLGDYYMHDDTFFPLAAYRAMSECRFVDNEGPVVFYK 434          
BLAST of EWM24911.1 vs. NCBI_GenBank
Match: gi|675214169|ref|XP_008915969.1| (hypothetical protein PPTG_19306 [Phytophthora parasitica INRA-310] >gi|568083775|gb|ETM98735.1| hypothetical protein PPTG_19306 [Phytophthora parasitica INRA-310])

HSP 1 Score: 440.654 bits (1132), Expect = 2.915e-149
Identity = 216/365 (59.18%), Postives = 264/365 (72.33%), Query Frame = 0
Query:  122 APPSLPLAPPPFTLADIKAAVPRHCFERSLTTSFFHLACDLVLVALLGYLATLIGHPDVPTMSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLM---DEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKNAVFYKHR 483
            AP  LPL  P F+L D++AA+P+HCFERS  TS +++  +L+  A L Y AT I   D      YLLWP+YW+ QGS LTG+WVIAHECGHQ++   E VNNL+G VLHSALLVPYHSWRISH KHH+NTGSCENDEVF P  +  +    DE L  SPL  L +I+ ML VGWMPGYL  NATGP KY GK+ SHF+P SA++S ++R  I+ SDI   L +  +      + F T+ K+Y++PY +VN +LVLITYLQHTD +IPHFR +EW+W RGALCTVDRSFG  LD   H I DTHVCHHIFSKMPFYH +EA+  IK  LG +YLKDDTP+  ALWRSYT CK+V+ D   VFYK++
Sbjct:   36 APAPLPLDLPHFSLRDLRAAIPKHCFERSFITSTYYMIKNLLTCAALFYAATYI---DQTGNFAYLLWPVYWFFQGSYLTGIWVIAHECGHQAYCSSEVVNNLIGLVLHSALLVPYHSWRISHRKHHSNTGSCENDEVFVPVTRSVIASSWDENLEDSPLYQLYRIVYMLVVGWMPGYLFFNATGPTKYWGKSRSHFNPYSAIYSDRERWMIVLSDIFLVLVIGVLATLVYTFSFYTMLKFYVVPYFIVNAYLVLITYLQHTDTYIPHFRDSEWNWLRGALCTVDRSFGPYLDSVVHRIVDTHVCHHIFSKMPFYHCEEATNAIKPLLGKFYLKDDTPVPIALWRSYTHCKFVEDDGKIVFYKNK 397          
BLAST of EWM24911.1 vs. NCBI_GenBank
Match: gi|695443710|ref|XP_009533768.1| (hypothetical protein PHYSODRAFT_264618 [Phytophthora sojae] >gi|348671202|gb|EGZ11023.1| hypothetical protein PHYSODRAFT_264618 [Phytophthora sojae])

HSP 1 Score: 440.654 bits (1132), Expect = 2.915e-149
Identity = 216/366 (59.02%), Postives = 268/366 (73.22%), Query Frame = 0
Query:  122 APPSLPLAPPPFTLADIKAAVPRHCFERSLTTSFFHLACDLVLVALLGYLATLIGHPDVPTMSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLM---DEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQ-YGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKNAVFYKHR 483
            AP  LPL  P F+L D++AA+P+HCFERS  TS +++  +++  A L Y AT I   D    + Y+LWP+YW+ QGS LTGVWVIAHECGHQ++   E VNNL+G VLHSALLVPYHSWRISH KHH+NTGSCENDEVF P  +  L    +E L  SPL  L +I+ ML VGWMPGYL  NATGP KY GK+ SHF+P SA+++ ++R  I+ SDI F +A+  V+ A    + F+T+ K+Y++PY +VN +LVLITYLQHTD +IPHFR  EW+W RGALCTVDRSFG  LD   H I DTHVCHHIFSKMPFYH +EA+  IK  LG +YLKD TP+  ALWRSYT CK+V+ D   VFYK++
Sbjct:   36 APAPLPLELPHFSLRDLRAAIPKHCFERSFVTSTYYMIKNVLTCAALFYAATFI---DRAGAAAYVLWPVYWFFQGSYLTGVWVIAHECGHQAYCSSEVVNNLIGLVLHSALLVPYHSWRISHRKHHSNTGSCENDEVFVPVTRSVLASSWNETLEDSPLYQLYRIVYMLVVGWMPGYLFFNATGPTKYWGKSRSHFNPYSAIYADRERWMIVLSDI-FLVAMLAVLAALVHTFSFNTMVKFYVVPYFIVNAYLVLITYLQHTDTYIPHFREGEWNWLRGALCTVDRSFGPFLDSVVHRIVDTHVCHHIFSKMPFYHCEEATNAIKPLLGKFYLKDTTPVPVALWRSYTHCKFVEDDGKVVFYKNK 397          
BLAST of EWM24911.1 vs. NCBI_GenBank
Match: gi|970660448|gb|KUF97996.1| (hypothetical protein AM588_10007322 [Phytophthora nicotianae] >gi|970665538|gb|KUG02166.1| Delta(12) fatty acid desaturase [Phytophthora nicotianae])

HSP 1 Score: 440.269 bits (1131), Expect = 4.409e-149
Identity = 216/365 (59.18%), Postives = 264/365 (72.33%), Query Frame = 0
Query:  122 APPSLPLAPPPFTLADIKAAVPRHCFERSLTTSFFHLACDLVLVALLGYLATLIGHPDVPTMSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLM---DEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKNAVFYKHR 483
            AP  LPL  P F+L D++AA+P+HCFERS  TS +++  +L+  A L Y AT I   D      YLLWP+YW+ QGS LTG+WVIAHECGHQ++   E VNNL+G VLHSALLVPYHSWRISH KHH+NTGSCENDEVF P  +  +    DE L  SPL  L +I+ ML VGWMPGYL  NATGP KY GK+ SHF+P SA++S ++R  I+ SDI   L +  +      + F T+ K+Y++PY +VN +LVLITYLQHTD +IPHFR +EW+W RGALCTVDRSFG  LD   H I DTHVCHHIFSKMPFYH +EA+  IK  LG +YLKDDTP+  ALWRSYT CK+V+ D   VFYK++
Sbjct:   36 APAPLPLDLPHFSLRDLRAAIPKHCFERSFITSTYYMIKNLLTCAALFYAATYI---DQTGNFAYLLWPVYWFFQGSYLTGIWVIAHECGHQAYCSSEVVNNLIGLVLHSALLVPYHSWRISHRKHHSNTGSCENDEVFVPVTRSVIASSWDENLEDSPLYQLYRIVYMLVVGWMPGYLFFNATGPTKYWGKSRSHFNPYSAIYSDRERWMIVLSDIFLVLMIGVLATLVYTFSFYTMLKFYVVPYFIVNAYLVLITYLQHTDTYIPHFRDSEWNWLRGALCTVDRSFGPYLDSVVHRIVDTHVCHHIFSKMPFYHCEEATNAIKPLLGKFYLKDDTPVPIALWRSYTHCKFVEDDGKIVFYKNK 397          
BLAST of EWM24911.1 vs. NCBI_GenBank
Match: gi|566031627|gb|ETI54538.1| (hypothetical protein F443_02671 [Phytophthora parasitica P1569] >gi|567969296|gb|ETK94391.1| hypothetical protein L915_02553 [Phytophthora parasitica] >gi|567997678|gb|ETL47757.1| hypothetical protein L916_02526 [Phytophthora parasitica] >gi|568057387|gb|ETM54056.1| hypothetical protein L914_02547 [Phytophthora parasitica] >gi|570335342|gb|ETO83290.1| hypothetical protein F444_02672 [Phytophthora parasitica P1976] >gi|570959390|gb|ETP24369.1| hypothetical protein F441_02633 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 440.269 bits (1131), Expect = 5.136e-149
Identity = 216/365 (59.18%), Postives = 264/365 (72.33%), Query Frame = 0
Query:  122 APPSLPLAPPPFTLADIKAAVPRHCFERSLTTSFFHLACDLVLVALLGYLATLIGHPDVPTMSRYLLWPLYWYAQGSVLTGVWVIAHECGHQSFSPYERVNNLVGWVLHSALLVPYHSWRISHGKHHNNTGSCENDEVFAPPIKEDLM---DEILLHSPLANLAQIIIMLTVGWMPGYLLMNATGPRKYKGKNNSHFDPNSALFSPKDRLDIIWSDIGFFLALAGVVWACTQYGFSTVGKYYLLPYMVVNYHLVLITYLQHTDVFIPHFRGAEWSWFRGALCTVDRSFGWLLDHTFHHISDTHVCHHIFSKMPFYHAQEASEHIKKALGPYYLKDDTPIWKALWRSYTLCKYVDTDKNAVFYKHR 483
            AP  LPL  P F+L D++AA+P+HCFERS  TS +++  +L+  A L Y AT I   D      YLLWP+YW+ QGS LTG+WVIAHECGHQ++   E VNNL+G VLHSALLVPYHSWRISH KHH+NTGSCENDEVF P  +  +    DE L  SPL  L +I+ ML VGWMPGYL  NATGP KY GK+ SHF+P SA++S ++R  I+ SDI   L +  +      + F T+ K+Y++PY +VN +LVLITYLQHTD +IPHFR +EW+W RGALCTVDRSFG  LD   H I DTHVCHHIFSKMPFYH +EA+  IK  LG +YLKDDTP+  ALWRSYT CK+V+ D   VFYK++
Sbjct:   36 APAPLPLDLPHFSLRDLRAAIPKHCFERSFITSTYYMIKNLLTCAALFYAATYI---DQTGNFAYLLWPVYWFFQGSYLTGIWVIAHECGHQAYCSSEVVNNLIGLVLHSALLVPYHSWRISHRKHHSNTGSCENDEVFVPVTRSVIASSWDENLEDSPLYQLYRIVYMLVVGWMPGYLFFNATGPTKYWGKSRSHFNPYSAIYSDRERWMIVLSDIFLVLMIGILATLVYTFSFYTMLKFYVVPYFIVNAYLVLITYLQHTDTYIPHFRDSEWNWLRGALCTVDRSFGPYLDSVVHRIVDTHVCHHIFSKMPFYHCEEATNAIKPLLGKFYLKDDTPVPIALWRSYTHCKFVEDDGKIVFYKNK 397          
The following BLAST results are available for this feature:
BLAST of EWM24911.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106539|gb|EWM24911.1|0.000e+0100.00fatty acid desaturase [Nannochloropsis gaditana][more]
gi|553190741|ref|XP_005855248.1|0.000e+099.56omega-6 fatty acid desaturase delta-12 [Nannochlor... [more]
gi|1154501347|gb|AQX92134.1|0.000e+083.15delta-12 fatty acid desaturase [Nannochloropsis oc... [more]
gi|553185754|ref|XP_005854300.1|0.000e+097.62omega-6 fatty acid desaturase delta-12 [Nannochlor... [more]
gi|298708526|emb|CBJ49159.1|5.134e-17655.24Fatty acid desaturase [Ectocarpus siliculosus][more]
gi|340545059|dbj|BAK52809.1|1.133e-16352.65delta12-fatty acid desaturase [Pinguiochrysis pyri... [more]
gi|675214169|ref|XP_008915969.1|2.915e-14959.18hypothetical protein PPTG_19306 [Phytophthora para... [more]
gi|695443710|ref|XP_009533768.1|2.915e-14959.02hypothetical protein PHYSODRAFT_264618 [Phytophtho... [more]
gi|970660448|gb|KUF97996.1|4.409e-14959.18hypothetical protein AM588_10007322 [Phytophthora ... [more]
gi|566031627|gb|ETI54538.1|5.136e-14959.18hypothetical protein F443_02671 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5765rna5765Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications