EWM24963.1, cds5715 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24963.1 vs. NCBI_GenBank
Match: gi|585106594|gb|EWM24963.1| (zinc finger ran-binding domain-containing protein 3 [Nannochloropsis gaditana]) HSP 1 Score: 3468.71 bits (8993), Expect = 0.000e+0 Identity = 1680/1680 (100.00%), Postives = 1680/1680 (100.00%), Query Frame = 0
Query: 1 MHSTVNPGSKQGCRMSRRSSDEEVIDVSRSQFVGSKNGERNPQLLVVAPGPVNDAVVTQGAHSPPDRVGVHRRLPLQETRTNSIRLHDSSIQNLRSDVWAAFCRPFEVNGVAVASKTHTRLLQMPVTSSSRGDTIQVTKCSEPQESLKPKDCGDIHEEGAFRRESAVSDPLRKDSLRTDTTASKSSVQHVPSGSRRNIPNCITTSVKSSPPLCWHCKHTMEDRGVCSIPRYRCQFFPRCPGRCGTDRPQEAVFLQLRGPSLKDLCLSYPDMPATAVAFGANWLSARLKLCGLKDAVLDKARGIRPVPPGQRGGGGAWEVVLDVRECENVTRLLREHPTLDLVREVPLPTLRFVSRLLDGEAAREEGGSGFFATPGEVERRFALLPRRVMKALFDFQKEGVRFALRRQGRCFIGDEMGTGKTLQALAVMVCYQTEWPLLIVVPASLRLLWAEVVEKWVPFLRPADIHVIFREADRVSSRSECPPVVITSYEMLRNLEASMTAVAFHCVIFDESQKMATTRAHSALNRVTSAALRVASSAIRVLLLSGTPTMARPFEIYDQVRLLQADLLSTPQGSHDGASKWEFGRNYCTGVYWQTRSQRPPLAAAKYDGTRCDEELYWLLRNAVLIRRLKKDVMAELPSLVRTVVRVEEGKDGASIWSQQVDSTETEGRIECSFEGGASLKKIRAAYDQNCAAETCLMERMEDEQTELQITWGDSEHRDERKRFVGQSEYHQLGHLKLGGVKEWLADRLLGGWLDAGVVGYEEDAIVEADAPKFVIFAHHLDVLAVLHGFLHNIFVRHRACRRLAFHWSQVQIQGSTPPETRQDLVKRFKNDRYCRMALIGITAGGSGLDLAAASTAVFVELPNSPHWLRQAEDRLHRRGQRRRVQIYYLVLPPGSAEDKVWQCMRRLLRENTAVINSREEAEELDVNRVEEFRAQASLPQDAPSQAAELLEGGLFPLLSKGEERENFWPGNGLSESPPEFVREASEPEGGKEHLRGESERQADRVHDPSFPDTCLLSETNAHSANISSPSSKPAVASVRKACNAVEDAAQTNGVNRTQEMSPPAVLASGVPVINHFLHGRFGGEDYEWELEALAGLTQEDADEEQTVQAADGEGQVLQQRSDGLPNDIKVNADFSSYERCSAKTGTTTEGNHTGNVAEDTVRCSYECADSPVHLSPSSQWCHPSPDKNTRTDKDITRATCALKGNVGCGQKPAVKLLYNLWFEVSKHTGWVHLHEHEDGSKPLGVHVDPLDYYHLTGLAQNALSSLPLLEEIRARAADEIILEDLPPFIQVAPGEKWQLLKFMTQFQKECARIRNQLYGYVLQPMEGGLQGWIRKHRTNRQRAGRQKASLPPRVLSSWDPDFGYRRHLTYEELFDPSRHSNVTRHVLVTSGRLFRRSFRQPLDPQTHDPLCFCCGTAFSLPGGTRTLQDLLCSAACLAYFACLSRGGLRREVGRRDRGICEMCGLDTLGLLERVKHSSCLKSREMLVVEEVPKFKERPKLLARLVREPKEGHVWQADHIHMVAEGGGLCDTTNGRALCVLCHASVTAEQSRLGRGDKRRAGREKVKKERGAGMHVERGEWGTTTGQGDAEGGARGRVVQDYTGMKMRGRRDTEQACLNGRTDPMEGEDGDNRGEEDIRGEASGLKKCQQIAEDYERDENQRLKVKAEPIEDHQLIAMCP 1680
MHSTVNPGSKQGCRMSRRSSDEEVIDVSRSQFVGSKNGERNPQLLVVAPGPVNDAVVTQGAHSPPDRVGVHRRLPLQETRTNSIRLHDSSIQNLRSDVWAAFCRPFEVNGVAVASKTHTRLLQMPVTSSSRGDTIQVTKCSEPQESLKPKDCGDIHEEGAFRRESAVSDPLRKDSLRTDTTASKSSVQHVPSGSRRNIPNCITTSVKSSPPLCWHCKHTMEDRGVCSIPRYRCQFFPRCPGRCGTDRPQEAVFLQLRGPSLKDLCLSYPDMPATAVAFGANWLSARLKLCGLKDAVLDKARGIRPVPPGQRGGGGAWEVVLDVRECENVTRLLREHPTLDLVREVPLPTLRFVSRLLDGEAAREEGGSGFFATPGEVERRFALLPRRVMKALFDFQKEGVRFALRRQGRCFIGDEMGTGKTLQALAVMVCYQTEWPLLIVVPASLRLLWAEVVEKWVPFLRPADIHVIFREADRVSSRSECPPVVITSYEMLRNLEASMTAVAFHCVIFDESQKMATTRAHSALNRVTSAALRVASSAIRVLLLSGTPTMARPFEIYDQVRLLQADLLSTPQGSHDGASKWEFGRNYCTGVYWQTRSQRPPLAAAKYDGTRCDEELYWLLRNAVLIRRLKKDVMAELPSLVRTVVRVEEGKDGASIWSQQVDSTETEGRIECSFEGGASLKKIRAAYDQNCAAETCLMERMEDEQTELQITWGDSEHRDERKRFVGQSEYHQLGHLKLGGVKEWLADRLLGGWLDAGVVGYEEDAIVEADAPKFVIFAHHLDVLAVLHGFLHNIFVRHRACRRLAFHWSQVQIQGSTPPETRQDLVKRFKNDRYCRMALIGITAGGSGLDLAAASTAVFVELPNSPHWLRQAEDRLHRRGQRRRVQIYYLVLPPGSAEDKVWQCMRRLLRENTAVINSREEAEELDVNRVEEFRAQASLPQDAPSQAAELLEGGLFPLLSKGEERENFWPGNGLSESPPEFVREASEPEGGKEHLRGESERQADRVHDPSFPDTCLLSETNAHSANISSPSSKPAVASVRKACNAVEDAAQTNGVNRTQEMSPPAVLASGVPVINHFLHGRFGGEDYEWELEALAGLTQEDADEEQTVQAADGEGQVLQQRSDGLPNDIKVNADFSSYERCSAKTGTTTEGNHTGNVAEDTVRCSYECADSPVHLSPSSQWCHPSPDKNTRTDKDITRATCALKGNVGCGQKPAVKLLYNLWFEVSKHTGWVHLHEHEDGSKPLGVHVDPLDYYHLTGLAQNALSSLPLLEEIRARAADEIILEDLPPFIQVAPGEKWQLLKFMTQFQKECARIRNQLYGYVLQPMEGGLQGWIRKHRTNRQRAGRQKASLPPRVLSSWDPDFGYRRHLTYEELFDPSRHSNVTRHVLVTSGRLFRRSFRQPLDPQTHDPLCFCCGTAFSLPGGTRTLQDLLCSAACLAYFACLSRGGLRREVGRRDRGICEMCGLDTLGLLERVKHSSCLKSREMLVVEEVPKFKERPKLLARLVREPKEGHVWQADHIHMVAEGGGLCDTTNGRALCVLCHASVTAEQSRLGRGDKRRAGREKVKKERGAGMHVERGEWGTTTGQGDAEGGARGRVVQDYTGMKMRGRRDTEQACLNGRTDPMEGEDGDNRGEEDIRGEASGLKKCQQIAEDYERDENQRLKVKAEPIEDHQLIAMCP
Sbjct: 1 MHSTVNPGSKQGCRMSRRSSDEEVIDVSRSQFVGSKNGERNPQLLVVAPGPVNDAVVTQGAHSPPDRVGVHRRLPLQETRTNSIRLHDSSIQNLRSDVWAAFCRPFEVNGVAVASKTHTRLLQMPVTSSSRGDTIQVTKCSEPQESLKPKDCGDIHEEGAFRRESAVSDPLRKDSLRTDTTASKSSVQHVPSGSRRNIPNCITTSVKSSPPLCWHCKHTMEDRGVCSIPRYRCQFFPRCPGRCGTDRPQEAVFLQLRGPSLKDLCLSYPDMPATAVAFGANWLSARLKLCGLKDAVLDKARGIRPVPPGQRGGGGAWEVVLDVRECENVTRLLREHPTLDLVREVPLPTLRFVSRLLDGEAAREEGGSGFFATPGEVERRFALLPRRVMKALFDFQKEGVRFALRRQGRCFIGDEMGTGKTLQALAVMVCYQTEWPLLIVVPASLRLLWAEVVEKWVPFLRPADIHVIFREADRVSSRSECPPVVITSYEMLRNLEASMTAVAFHCVIFDESQKMATTRAHSALNRVTSAALRVASSAIRVLLLSGTPTMARPFEIYDQVRLLQADLLSTPQGSHDGASKWEFGRNYCTGVYWQTRSQRPPLAAAKYDGTRCDEELYWLLRNAVLIRRLKKDVMAELPSLVRTVVRVEEGKDGASIWSQQVDSTETEGRIECSFEGGASLKKIRAAYDQNCAAETCLMERMEDEQTELQITWGDSEHRDERKRFVGQSEYHQLGHLKLGGVKEWLADRLLGGWLDAGVVGYEEDAIVEADAPKFVIFAHHLDVLAVLHGFLHNIFVRHRACRRLAFHWSQVQIQGSTPPETRQDLVKRFKNDRYCRMALIGITAGGSGLDLAAASTAVFVELPNSPHWLRQAEDRLHRRGQRRRVQIYYLVLPPGSAEDKVWQCMRRLLRENTAVINSREEAEELDVNRVEEFRAQASLPQDAPSQAAELLEGGLFPLLSKGEERENFWPGNGLSESPPEFVREASEPEGGKEHLRGESERQADRVHDPSFPDTCLLSETNAHSANISSPSSKPAVASVRKACNAVEDAAQTNGVNRTQEMSPPAVLASGVPVINHFLHGRFGGEDYEWELEALAGLTQEDADEEQTVQAADGEGQVLQQRSDGLPNDIKVNADFSSYERCSAKTGTTTEGNHTGNVAEDTVRCSYECADSPVHLSPSSQWCHPSPDKNTRTDKDITRATCALKGNVGCGQKPAVKLLYNLWFEVSKHTGWVHLHEHEDGSKPLGVHVDPLDYYHLTGLAQNALSSLPLLEEIRARAADEIILEDLPPFIQVAPGEKWQLLKFMTQFQKECARIRNQLYGYVLQPMEGGLQGWIRKHRTNRQRAGRQKASLPPRVLSSWDPDFGYRRHLTYEELFDPSRHSNVTRHVLVTSGRLFRRSFRQPLDPQTHDPLCFCCGTAFSLPGGTRTLQDLLCSAACLAYFACLSRGGLRREVGRRDRGICEMCGLDTLGLLERVKHSSCLKSREMLVVEEVPKFKERPKLLARLVREPKEGHVWQADHIHMVAEGGGLCDTTNGRALCVLCHASVTAEQSRLGRGDKRRAGREKVKKERGAGMHVERGEWGTTTGQGDAEGGARGRVVQDYTGMKMRGRRDTEQACLNGRTDPMEGEDGDNRGEEDIRGEASGLKKCQQIAEDYERDENQRLKVKAEPIEDHQLIAMCP 1680
BLAST of EWM24963.1 vs. NCBI_GenBank
Match: gi|168028268|ref|XP_001766650.1| (SNF2 family DNA-dependent ATPase [Physcomitrella patens] >gi|162682082|gb|EDQ68503.1| SNF2 family DNA-dependent ATPase, partial [Physcomitrella patens]) HSP 1 Score: 313.153 bits (801), Expect = 4.455e-84 Identity = 199/560 (35.54%), Postives = 288/560 (51.43%), Query Frame = 0
Query: 373 TPGEVERRFALLPRRVMKALFDFQKEGVRFALRRQGRCFIGDEMGTGKTLQALAVMVCYQTEWPLLIVVPASLRLLWAEVVEKWVPFLRPADIHVIFREADRVSSRSECPPVVITSYEMLRNLEASMTAVAFHCVIFDESQKMATTRAHSALNRV--TSAALRVASSAIRVLLLSGTPTMARPFEIYDQVRLLQADLLSTPQGSHDGASKWEFGRNYCTGVYWQTRSQRPPLAAAKYDGTRCDE--ELYWLLRNAVLIRRLKKDVMAELPSLVRTVVRVEEGKDGASIWSQQVDSTETEGRIECSFEGGASLKKIRAAYDQNCAAETCLMERMEDEQTELQITWGDSEHRDE---RKRFVGQSEYHQLGHLKLGGVKEWLADRLLGGWLDAGVVGYEEDAIVEADAPKFVIFAHHLDVLAVLHGFLHNIFVRHRACRRLAFHWSQVQIQGSTPPETRQDLVKRFKNDRYCRMALIGITAGGSGLDLAAASTAVFVELPNSPHWLRQAEDRLHRRGQRRRVQIYYLVLPPGSAEDKVWQCMRRLLRENTAVINSREEAEEL 925
T EVE+ LP + K L FQKEGV+F L+R GRC DEMG GKT+QA+A+ CY+ E LL++ PASLRL+WA+ +E+W+P+L P D+H++F + ++ E P VV+TS+ ML L SM + + VI DE+ + T + V T A L V RV+LL+GTP+++RPF+I++Q+ L +LL G +K+EF RNYC + D +R EL LL+ V+IRRLK+DVM +LP R ++ ++ + T R S + G K C E + EDE + DSE + K ++G KL G +EWL + + + ++ EA K +IFAHHL VL + F+ + V + V+I GST P+ R V RF++ R ++A++G+ AGG GLD +AA + VFVELP S + QAEDR HRRGQ+ V IY V G+A+D+ WQ + R L + + N E E+
Sbjct: 52 TDSEVEQLLLKLPPNLSKTLLPFQKEGVKFGLQRGGRCLFADEMGVGKTIQAIAMASCYKEEGSLLVICPASLRLVWADELERWLPYLSPVDVHLVFGRKNNLTENMELPKVVVTSFNMLTRLRESMLSRKWGMVIVDEAHNIRCTSRKVECDEVSLTMAVLEVVQYVKRVVLLTGTPSLSRPFDIFNQINCLWPNLL--------GKNKYEFARNYCDRQWSPCGHSNFKFCVFPQDYSRGSRLTELNVLLKQTVMIRRLKEDVMMQLPPKRRQLICLQLAPSDV---KEAKAFTAANARERISVQLGEEACKCGFTRKGFCDCE----DENEDE------SHADSEEGENPLASKTSARSLTEQEVGVAKLRGFQEWLLN---------NSIFADRESQDEATREKIIIFAHHLKVLDTIQTFVQSKGVEY------------VRIDGSTLPQDRLKNVNRFRSQREVKVAIVGLQAGGVGLDFSAAQSVVFVELPKSASEMLQAEDRAHRRGQKNSVNIYIFV-AKGTADDRHWQSLSRSLERVSTMTNGAETTLEV 568 HSP 2 Score: 108.997 bits (271), Expect = 4.851e-20 Identity = 108/383 (28.20%), Postives = 168/383 (43.86%), Query Frame = 0
Query: 1205 GNVGCGQKPAVKLLYNLWFEVSKHTGWVHLHEHE-DG-SKP--LGVHVDPLDYYHLTGLAQNALSSLPLLEEIRARAADEIILEDLPPFIQVAPGEKWQLLKFMTQFQKECARIRNQLYGYVLQ-PMEGGLQ----------GWIRKHRTNRQRAGRQKASLPPRVLSSWDPDFGYRRHLTYEELFDPSRHSNVTRHVLVTSGRLFRRSFRQPLDPQTHDPLCFCCGTAFSLPGGTRTLQDLLCSAACL-AYFACLSRGGLRREVGRRDRGICEMCGLDTLGLLERVKHSSCLKSREMLVVEEVPKFKERPKLLARLVREPKEGHVWQADHIHMVAEGGGLCDTTNGRALCVLCHASVTAEQ--SRLGRGDKRRAGREKVKKE 1569
G C + PA L+ FEVS +TG VHL DG S+P L + P D L A+N + R A LP ++ + + + F+ ++ + +RN+L G L P+E L+ G I K + R+ +++ ++W +RR+ E + + + PL +P C G LP +DL C CL Y SR +R E+ + G+C CGLD L+ER++ ++ R+ V+E+ +F + ++L +LV+EP EG+ W ADHI VA+GGG C N + LC+ CHA VTA+Q R K + G +K K+
Sbjct: 668 GFDACVEFPATSLM----FEVSSNTGRVHLFRRSSDGHSRPTSLQANFKPED---LALFAENGICE---------RGA-------LPAWLIFSASHREAAILFLDEYNRLRPVLRNRLRGRPLSLPLETELKSYKDKDHYVAGGIMKGGSKRRWTPKEEVGAKIPAGATWRTVSFHRRNGLKETKIEQAWSAEDV-----------------PLCKYCQNP---CKGKRSMLP---ELFEDLFCQTTCLNEYSNKTSRRRIREELFDLEGGVCVKCGLDCHALVERIRPLP-VELRQAYVMEKASQFTKHKRMLQKLVKEPIEGNAWHADHIIAVADGGGECTLENFQTLCIACHAEVTADQRRHRAAESLKTKLGLQKTMKK 1003
BLAST of EWM24963.1 vs. NCBI_GenBank
Match: gi|297319162|gb|EFH49584.1| (SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 302.368 bits (773), Expect = 1.565e-80 Identity = 207/644 (32.14%), Postives = 320/644 (49.69%), Query Frame = 0
Query: 313 GGGAWEVVLDVRECENVTRLLREHPTLDLVREVPLPTLRFVSRLLDGE-AAREEGGSGFFATPGEVERRFALLPRRVMKALFDFQKEGVRFALRRQGRCFIGDEMGTGKTLQALAVMVCYQTEWPLLIVVPASLRLLWAEVVEKWVPFLRPADIHVIFREADRVSSRSECPPVVITSYEMLRNLEASMTAVAFHCVIFDESQKMATTRAHSALNRVTSAALRVASSAIRVLLLSGTPTMARPFEIYDQVRLLQADLLSTPQGSHDGASKWEFGRNYC-TGVYWQTRSQRPPLAAAKYDGTRCDEELYWLLRNAVLIRRLKKDVMAELPSLVRTVVRVEEGKDGASIWSQQVDSTETEGRIECSFEGGASLKKIRAAYDQNCAAETCLMERMEDEQTELQITWGDSEHRDERKRFVGQSEYHQLGHLKLGGVKEWLADRLLGGWLDAGVVGYEEDAIVEADAPKFVIFAHHLDVLAVLHGFLHNIFVRHRACRRLAFHWSQVQIQGSTPPETRQDLVKRFKNDRYCRMALIGITAGGSGLDLAAASTAVFVELPNSPHWLRQAEDRLHRRGQRRRVQIYYLVLPPGSAEDKVWQCMRRLLRENTAVINSREEAE-ELDVNRVEEFRAQASLPQDAPSQAAELLEG 953
GG A V +R+ V+ L+ +++ V E+P TL V +L + + + T +VE+ LPR+++ AL FQ +G+RF LRR GRCFI DEMG GKTLQA+A+ C+ +E +L+V PA LR WAE +E+W+PF P+DIH++F D + P VV+ SY+ML++L +M + +I DES + ++ S + + L VA ++LLSGTP+++RPF+I+ Q+ +L LL G K+EF + YC G+ R + + GTR EL LL V+IRRLK+ V+ +LP R +V + K ++ + V + + + DQN +E + D + D + G+ Y QLG KL +EWL+ L LD ED + + K V+FAHH VL + F+ + + + F V+I G T P RQ V+ F+ ++A+IG+ AGG GLD +AA VF+ELP +P L QAEDR HRRGQ V + Y+ + ++ WQ + + L ++ + + + + E+++ R F+ D S E+LE
Sbjct: 127 GGKAG--VYKIRDYNMVSGCLKRSKSVE-VEEIPWKTLAVVEKLSQSFISGKWQPCIPEHYTEEKVEKLIETLPRKLVSALLPFQLDGLRFGLRRGGRCFIADEMGLGKTLQAIAIAGCFISEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHQDNPAYLPRWPKVVVISYKMLQHLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKT-VLNVAEKVKHIVLLSGTPSISRPFDIFHQINILWPGLL--------GKEKYEFAKTYCEVGL---VRGMQGKIFQDFSKGTRL-LELNILLNQTVMIRRLKQHVLTQLPPKRRQIVTILLKKSDIALATAIVSEANQKANKQNDGTIAEVTENSHEPKDQNAQG--------SNEAGHVNAENSDGPNSDRENQLCGKLSYQQLGIAKLSAFREWLSLHPLLSGLDYT----PEDIDGDTSSTKMVVFAHHHKVLDGIQEFMCD--------KGIGF----VRIDGMTLPRDRQLAVQSFQFSSEVKVAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNV-YIFCAKDTMDESNWQNLNKKLHRISSTTDGKYDGKTEIEIERAYIFKP------DEESSEREVLEA 723 HSP 2 Score: 92.8189 bits (229), Expect = 4.255e-15 Identity = 103/377 (27.32%), Postives = 152/377 (40.32%), Query Frame = 0
Query: 1217 LLYNLWFEVSKHTGWVHLHEHEDGSKPLGVHVDPLDYYHLTGLAQNALSSLPLLEEIRARAADE-IILEDLPPFIQVAPGEKWQLLKFMTQFQKECARIRNQLYGYVLQPMEGGLQGWIRKHRTNRQRAGRQKASLPPRVLSSWDPDFGYRRHLTYEELFDPSRHSNVTRHVLVTSGRLFRRSFRQPLDPQTHDPLCFCC-----GTAFSLPGGTRTLQDLLCSAACLAYFACLSRGGLRREVGRRDRGICEMCGLDTLGLLERVKHSSCLKSREMLVVEEVPKFKERPKLLARLVREPKEGHVWQADHIHMVAEGGGLCDTTNGRALCVLCHASVTAEQS---RLGRGDKRRAGREKVKKERGAGMHVERGEWGTT 1584
L+ +L FEVS++TG +HL+ S LG DP H EEI A + E P I P +L+FM +++ + +L G LQ + L+ T+ G + RR+ + E+ P + V + V + SG + +++PLC C G P +DL C AC + + R++ + GIC C LD L+ R++ L+ R + + P+ R LL LV EP EG+ W ADHI V +GGG C N R LCV CHA+VTA Q +L R R+ + + + R E G T
Sbjct: 822 LIDSLRFEVSQNTGRIHLY-----SCILGK--DPRPRPHFQNFRP---------EEIEASNPSQGPNKEKNPESITDDPVHVLAILEFMKEWKSLRPIEKRKLLGKPLQ-LPLSLELSYLSESTSHNNEGLLRGG-------------SKRRNTPFSEISIPVPENAVWKKVNLRSGHQKKEKEYTQAWSMSNEPLCKLCQKPCKGNNAKEP---EYFEDLFCDLACYEDYRTRTSSRYIRQI---EHGICTNCELDCHQLVRRLRPLP-LEKRRTYINKVAPELFARKNLLETLVNEPTEGNAWHADHIIPVYQGGGECRLENMRTLCVACHANVTAAQCAERKLIRSKARKQLKNTLNELRNNPKQKELPAEGNT 1161
BLAST of EWM24963.1 vs. NCBI_GenBank
Match: gi|1190994432|ref|XP_020878017.1| (DNA annealing helicase and endonuclease ZRANB3 isoform X1 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 302.368 bits (773), Expect = 1.785e-80 Identity = 207/644 (32.14%), Postives = 320/644 (49.69%), Query Frame = 0
Query: 313 GGGAWEVVLDVRECENVTRLLREHPTLDLVREVPLPTLRFVSRLLDGE-AAREEGGSGFFATPGEVERRFALLPRRVMKALFDFQKEGVRFALRRQGRCFIGDEMGTGKTLQALAVMVCYQTEWPLLIVVPASLRLLWAEVVEKWVPFLRPADIHVIFREADRVSSRSECPPVVITSYEMLRNLEASMTAVAFHCVIFDESQKMATTRAHSALNRVTSAALRVASSAIRVLLLSGTPTMARPFEIYDQVRLLQADLLSTPQGSHDGASKWEFGRNYC-TGVYWQTRSQRPPLAAAKYDGTRCDEELYWLLRNAVLIRRLKKDVMAELPSLVRTVVRVEEGKDGASIWSQQVDSTETEGRIECSFEGGASLKKIRAAYDQNCAAETCLMERMEDEQTELQITWGDSEHRDERKRFVGQSEYHQLGHLKLGGVKEWLADRLLGGWLDAGVVGYEEDAIVEADAPKFVIFAHHLDVLAVLHGFLHNIFVRHRACRRLAFHWSQVQIQGSTPPETRQDLVKRFKNDRYCRMALIGITAGGSGLDLAAASTAVFVELPNSPHWLRQAEDRLHRRGQRRRVQIYYLVLPPGSAEDKVWQCMRRLLRENTAVINSREEAE-ELDVNRVEEFRAQASLPQDAPSQAAELLEG 953
GG A V +R+ V+ L+ +++ V E+P TL V +L + + + T +VE+ LPR+++ AL FQ +G+RF LRR GRCFI DEMG GKTLQA+A+ C+ +E +L+V PA LR WAE +E+W+PF P+DIH++F D + P VV+ SY+ML++L +M + +I DES + ++ S + + L VA ++LLSGTP+++RPF+I+ Q+ +L LL G K+EF + YC G+ R + + GTR EL LL V+IRRLK+ V+ +LP R +V + K ++ + V + + + DQN +E + D + D + G+ Y QLG KL +EWL+ L LD ED + + K V+FAHH VL + F+ + + + F V+I G T P RQ V+ F+ ++A+IG+ AGG GLD +AA VF+ELP +P L QAEDR HRRGQ V + Y+ + ++ WQ + + L ++ + + + + E+++ R F+ D S E+LE
Sbjct: 127 GGKAG--VYKIRDYNMVSGCLKRSKSVE-VEEIPWKTLAVVEKLSQSFISGKWQPCIPEHYTEEKVEKLIETLPRKLVSALLPFQLDGLRFGLRRGGRCFIADEMGLGKTLQAIAIAGCFISEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHQDNPAYLPRWPKVVVISYKMLQHLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKT-VLNVAEKVKHIVLLSGTPSISRPFDIFHQINILWPGLL--------GKEKYEFAKTYCEVGL---VRGMQGKIFQDFSKGTRL-LELNILLNQTVMIRRLKQHVLTQLPPKRRQIVTILLKKSDIALATAIVSEANQKANKQNDGTIAEVTENSHEPKDQNAQG--------SNEAGHVNAENSDGPNSDRENQLCGKLSYQQLGIAKLSAFREWLSLHPLLSGLDYT----PEDIDGDTSSTKMVVFAHHHKVLDGIQEFMCD--------KGIGF----VRIDGMTLPRDRQLAVQSFQFSSEVKVAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNV-YIFCAKDTMDESNWQNLNKKLHRISSTTDGKYDGKTEIEIERAYIFKP------DEESSEREVLEA 723 HSP 2 Score: 96.2857 bits (238), Expect = 3.755e-16 Identity = 106/378 (28.04%), Postives = 155/378 (41.01%), Query Frame = 0
Query: 1217 LLYNLWFEVSKHTGWVHLHEHEDGSKPLGVHVDPLDYYHLTGLAQNALSSLPLLEEIRARAADE-IILEDLPPFIQVAPGEKWQLLKFMTQFQKECARIRNQLYGYVLQPMEGGLQGWIRKHRTNRQRAGRQKASLPPRVLSSWDPDFGYRRHLTYEELFDPSRHSNVTRHVLVTSGRLFRRSFRQPLDPQTHDPLCFCC-----GTAFSLPGGTRTLQDLLCSAACLA-YFACLSRGGLRREVGRRDRGICEMCGLDTLGLLERVKHSSCLKSREMLVVEEVPKFKERPKLLARLVREPKEGHVWQADHIHMVAEGGGLCDTTNGRALCVLCHASVTAEQS---RLGRGDKRRAGREKVKKERGAGMHVERGEWGTT 1584
L+ +L FEVS++TG +HL+ S LG DP H EEI A + E P I P +L+FM +++ + +L G LQ + L+ T+ G + RR+ + E+ P + V + V + SG + +++PLC C G P +DL C AC Y S +R+E+ + + GIC C LD L+ R++ L+ R + + P+ R LL LV EP EG+ W ADHI V +GGG C N R LCV CHA+VTA Q +L R R+ + + + R E G T
Sbjct: 822 LIDSLRFEVSQNTGRIHLY-----SCILGK--DPRPRPHFQNFRP---------EEIEASNPSQGPNKEKNPESITDDPVHVLAILEFMKEWKSLRPIEKRKLLGKPLQ-LPLSLELSYLSESTSHNNEGLLRGG-------------SKRRNTPFSEISIPVPENAVWKKVNLRSGHQKKEKEYTQAWSMSNEPLCKLCQKPCKGNNAKEP---EYFEDLFCDLACYEDYRTRTSSRYIRQELFQIEHGICTNCELDCHQLVRRLRPLP-LEKRRTYINKVAPELFARKNLLETLVNEPTEGNAWHADHIIPVYQGGGECRLENMRTLCVACHANVTAAQCAERKLIRSKARKQLKNTLNELRNNPKQKELPAEGNT 1165
BLAST of EWM24963.1 vs. NCBI_GenBank
Match: gi|1204909472|ref|XP_021287191.1| (DNA annealing helicase and endonuclease ZRANB3 [Herrania umbratica]) HSP 1 Score: 301.597 bits (771), Expect = 3.035e-80 Identity = 207/632 (32.75%), Postives = 318/632 (50.32%), Query Frame = 0
Query: 311 RGGGGAWEVVLDVRECENVTRLLREHPTLDLVREVPLPTLRFVSRL----LDGE--AAREEGGSGFFATPGEVERRFALLPRRVMKALFDFQKEGVRFALRRQGRCFIGDEMGTGKTLQALAVMVCYQTEWPLLIVVPASLRLLWAEVVEKWVPFLRPADIHVIFREADRVSSRSECPPVVITSYEMLRNLEASMTAVAFHCVIFDESQKMATTRAHSALNRVTSAALRVASSAIRVLLLSGTPTMARPFEIYDQVRLLQADLLSTPQGSHDGASKWEFGRNYCTGVYWQTRSQRPPLAAAKYDGTRCDEELYWLLRNAVLIRRLKKDVMAELPSLVRTVVRVEEGKDGASIWSQQVDSTETEGRIECSFEGGASLKKIRAAYDQNCAAETCLMERMEDEQTELQITWGDSEHRDERKRFVGQSEYHQLGHLKLGGVKEWLADRLLGGWLDAGVVGYEEDAIVEAD----APKFVIFAHHLDVLAVLHGFLHNIFVRHRACRR-LAFHWSQVQIQGSTPPETRQDLVKRFKNDRYCRMALIGITAGGSGLDLAAASTAVFVELPNSPHWLRQAEDRLHRRGQRRRVQIYYLVLPPGSAEDKVWQCMRRLLRENTAVINSREEA-EELDVNRV 930
+ GG V +R+ +V LRE ++ ++E+P TLR + + G+ R E + +V LPR ++ L FQ +G+RF LRR GRC I DEMG GKTLQA+A+ C+ E +L+V PA LR WAE +E+W+PF P+DIH++F D + +CP VV+ SY ML++L SM + +I DES + ++ S + + L +A R++LLSGTP+++RP++I+ Q+ +L LL G +K++F YC Q+ + G R EEL LL V+IRRLK+ V+ +LP R ++R++ K S + SF G +++N + +T E +E+ H ER + Y +LG KL G +EW + L + DA+VE D + K +IFAHH VL + F+ C + + F V+I G+T P+ RQ V F++ ++A+IGITAGG GLD ++A VF+ELP SP + QAEDR HRRGQ V I Y+ L + ++ WQ + + L ++ N + +A +E++V +
Sbjct: 129 QNSGGEKACVYKLRDYGSVLSCLRESKDIE-IKEIPHLTLRVIETFSRCSITGQWIPCRPE-----HLSEEDVHELIGKLPRTLLDRLLPFQLDGIRFGLRRGGRCLIADEMGLGKTLQAIAIAGCFMNEGCILVVCPAVLRYSWAEELERWLPFCLPSDIHLVFGHRDNPAYLKKCPRVVVISYTMLKHLRKSMLEQEWALLIVDESHHLRCSQKASESGEMQT-VLDLAEKVRRIVLLSGTPSLSRPYDIFHQINMLWPGLL--------GENKYKFAETYCAVNVGQSSQGFKDFSK----GIRL-EELNVLLSQTVMIRRLKEHVLGQLPPKRRQLIRLQLKK-----------SDIASAKAAISFANGED-------FEKNASKDTA-SENLEE------------NHDGERYCNSRELSYQELGVAKLRGFREWFSIHPLIA---------KSDAVVELDPNSSSHKMIIFAHHHKVLDGIQEFI---------CEKGIGF----VRIDGTTLPKDRQSAVLSFQSSNGVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNI-YIFLAKDTMDESYWQSLNKSLHRVSSTTNGKYDAMQEIEVEGI 686 HSP 2 Score: 98.9821 bits (245), Expect = 6.136e-17 Identity = 112/442 (25.34%), Postives = 176/442 (39.82%), Query Frame = 0
Query: 1172 PVHLSPSSQWCHPSPDKNTRTDKDITRATCALKGNVGCGQKPAVKLLYNLWFEVSKHTGWVHLHEHEDGS----KPLGVHVDPLDYYHLTGLAQNALSSLPLLEEIRARAADEIILEDLPPFIQVAPGEKWQLLKFMTQFQKECARIRNQLYGYVLQPMEGGLQGWIRKHRTNRQRAGRQKASLPPRVLSSWDPDFGYRRHLTYEELFDPSRHSNVTRHVLVTSGRLFRRSFRQPLDPQTHDPLCFCC-----GTAFSLPGGTRTLQDLLCSAACLA-YFACLSRGGLRREVGRRDRGICEMCGLDTLGLLERVKHSSCLKSREMLVVEEVPKFKERPKLLARLVREPKEGHVWQADHIHMVAEGGGLCDTTNGRALCVLCHASVTAEQSRLGRGDKRRAGREKVKKERGAGMHVERGEWGTTTGQGDAEGGARGRVVQDYT 1603
P+ ++ ++ C P P T T D + L + C + + +L FEVS++TG +HL+ G+ +PL + P + LA E + + + P + L F+ + K +L G LQ + ++ W K N R G KA R + + ++++ H+ + G+ R + Q T +PLC C G + P +DL C+ C Y S +R+E+ + + GIC C LD L++ +K S + RE + + PK + L+ +LV +P EG+VW ADHI V GGG C N R LCV CHA VTA Q +R + R K KK A M R + +++D T
Sbjct: 793 PLEMNKINKDCDPLPKGQTITADD--GVSIRLLEDECCSNQ-----VNSLRFEVSQYTGRIHLYSCIPGTDLRPRPLFQNFRPEEIESADALASGNK-------------------ETVSKYFKDNPAYRHALWAFINDWNKLRPIEHRKLSGKPLQ-LPLSVELWYLKESINHDRGGLLKAGSKRRTTPLCEISISLPPNAVWKKV-----------HLRGSCGKK-EREYTQGW-TLTDEPLCKLCQKPCKGRSAKTP---EYFEDLFCNLGCYEEYRLRTSNRSIRQELFQIEHGICSNCQLDCHQLVKHLKPLSSERRREY-IAKVAPKIASQKSLVDKLVSDPSEGNVWHADHIVPVYRGGGECRLENMRTLCVACHADVTAVQCA-----ERSSMRIKAKKNLKAIMSDLRNVGNIEKNASRRKDQGPSEIIEDIT 1185
BLAST of EWM24963.1 vs. NCBI_GenBank
Match: gi|1072931138|ref|XP_018476231.1| (PREDICTED: DNA annealing helicase and endonuclease ZRANB3 [Raphanus sativus]) HSP 1 Score: 298.901 bits (764), Expect = 1.805e-79 Identity = 211/649 (32.51%), Postives = 325/649 (50.08%), Query Frame = 0
Query: 309 GQRGGGGAWEVVLDVRECENVTRLLREHPTLDLVREVPLPTLRFVSRLLDG-EAAREEGGSGFFATPGEVERRFALLPRRVMKALFDFQKEGVRFALRRQGRCFIGDEMGTGKTLQALAVMVCYQTEWPLLIVVPASLRLLWAEVVEKWVPFLRPADIHVIFREADRVSSRSECPPVVITSYEMLRNLEASMTAVAFHCVIFDESQKMATTRAHSALNRVTSAALRVASSAIRVLLLSGTPTMARPFEIYDQVRLLQADLLSTPQGSHDGASKWEFGRNYC--------TGVYWQTRSQRPPLAAAKYDGTRCDEELYWLLRNAVLIRRLKKDVMAELPSLVRTVVRVEEGK-DGASIWSQQVDSTETEGRIECSFEGGASLKKIRAAYDQNCAAETCLMERMEDEQTELQITWGDSEHRDERKRFVGQSEYHQLGHLKLGGVKEWLA-DRLLGGWLDAGVVGYEEDAIVEADAPKFVIFAHHLDVLAVLHGFLHNIFVRHRACRRLAFHWSQVQIQGSTPPETRQDLVKRFKNDRYCRMALIGITAGGSGLDLAAASTAVFVELPNSPHWLRQAEDRLHRRGQRRRVQIYYLVLPPGSAEDKVWQCMRRLLRENTAVINSREEAE-ELDVNRVEEFR-AQASLPQDAP 944
Q GG V +R+ V LR T++ V E+P T V +L + R E + + +VE LPR+++ +L FQ +G+RF LRR GRC I DEMG GKTLQA+++ C+ E +L+V PA LR WAE +E+W+PF P+DIH++F + + P VV+ SY ML+ L +M + +I DES + ++ +S + + + L VA ++LLSGTP+++RPF+I+ Q+ +L LL G +K+EF + YC G +Q S+ GTR EL LL V+IRRLK+ V+ +LP R +V + K D A + ++ + I E K I M + ++ ++ D ++ + G Y QLG KL V+EWL+ L+ G LD ED + K VIFAHH VL + F+ + + + F V+I G+T P RQ V+ F+ ++A+IG+ AGG GLD +AA VFVELP +P L QAEDR HRRGQ V + Y+ + ++ WQ + + L ++ + + +A+ E+++ R F+ A+ S+ ++AP
Sbjct: 115 NQDGGKAG---VYKIRDYSTVLGSLRRSKTVE-VEEIPWITFAVVEKLSKSFVSGRWEPCTHEHFSEEKVEDMIGKLPRKLVDSLLPFQLDGLRFGLRRGGRCLIADEMGLGKTLQAISIAGCFMNEGSILVVCPAVLRYSWAEELERWLPFCLPSDIHLVFGHQNNPAYLPRWPKVVVISYTMLQRLRKTMLEREWALLILDESHHVRCSKKNSESSEIQT-VLDVAEKVKHIVLLSGTPSLSRPFDIFHQINMLWPGLL--------GKNKYEFAKTYCEVGLVKGIQGKIFQDFSK----------GTRL-LELNVLLNQTVMIRRLKQHVLTQLPPKRRQIVTILLKKSDIALAMTILSEANKPNAAITDVTENTHEPKGIAQ------------MAHVSNKDGDVNEVDSDDPDCEKDNQLSGNLTYQQLGVAKLSAVREWLSLHPLISGGLDYTPEEINED----TSSNKMVIFAHHHKVLDGVQEFMCD--------KGIGF----VRIDGTTLPRDRQLAVQSFQFSSEVKVAIIGVEAGGVGLDFSAAQNVVFVELPKTPSLLLQAEDRAHRRGQTSAVNV-YIFCAKDTMDESNWQNLNKKLHRISSTTDGKYDAKTEIEIERAHLFKPAEESIEREAP 710 HSP 2 Score: 94.3597 bits (233), Expect = 1.403e-15 Identity = 100/365 (27.40%), Postives = 150/365 (41.10%), Query Frame = 0
Query: 1217 LLYNLWFEVSKHTGWVHLHEHEDGSKPLGVHVDPLDYYHLTGLAQNALSSLPLLEEIRARAADEIILED-LPPFIQVAPGEKWQLLKFMTQFQKECARIRNQLYGYVLQPMEGGLQGWIRKHRTNRQRAGRQKASLPPRVLSSWDPDFGYRRHLTYEELFDPSRHSNVTRHVLVTSGRLFRRSFRQPLDPQTHDPLCFCC-----GTAFSLPGGTRTLQDLLCSAACLA-YFACLSRGGLRREVGRRDRGICEMCGLDTLGLLERVKHSSCLKSREMLVVEEVPKFKERPKLLARLVREPKEGHVWQADHIHMVAEGGGLCDTTNGRALCVLCHASVTAEQSRLGRGDKRRAGREKVKKERGAGM 1574
L+ +L FEVS++TG +HL+ G DP H EEI A + I +D + P +L+FM +++ + +L G LQ + L+ RT+ G + RR+ + E+ P ++V + V + SG + +++PLC C G+ P +DL C C Y S +R+E+ + + G+C C LD L+ +K K RE + + P R LL LV +P EG+ W ADHI V GGG C N R LCV CHA VTA Q +R+ R K +K+ A +
Sbjct: 812 LVDSLRFEVSQNTGRIHLYTCIPGK-------DPRPRPHFQNFRP---------EEIEASNSTPCINKDNTSESLTDDPVHVRAILEFMKEWKALRPIEKRKLLGKPLQ-LPLSLELSYLSERTSHNSEGLLRGG-------------SKRRNTPFSEISVPLPQNSVWKKVNLRSGYQRKEKEYTQAWSMSNEPLCKFCQKPCKGSNAKEP---EYFEDLFCDLECYEDYRTRTSSRYIRQELFQIEHGVCTNCNLDCHQLVRYIKPLPLEKRREY-INKVAPVLFSRKNLLETLVNDPAEGNAWHADHIIPVYRGGGECRLENMRTLCVACHADVTAAQCA-----ERKIIRSKARKQLKATL 1137
BLAST of EWM24963.1 vs. NCBI_GenBank
Match: gi|1190994434|ref|XP_020878018.1| (DNA annealing helicase and endonuclease ZRANB3 isoform X2 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 298.516 bits (763), Expect = 2.867e-79 Identity = 208/652 (31.90%), Postives = 322/652 (49.39%), Query Frame = 0
Query: 305 PVPPGQRGGGGAWEVVLDVRECENVTRLLREHPTLDLVREVPLPTLRFVSRLLDGE-AAREEGGSGFFATPGEVERRFALLPRRVMKALFDFQKEGVRFALRRQGRCFIGDEMGTGKTLQALAVMVCYQTEWPLLIVVPASLRLLWAEVVEKWVPFLRPADIHVIFREADRVSSRSECPPVVITSYEMLRNLEASMTAVAFHCVIFDESQKMATTRAHSALNRVTSAALRVASSAIRVLLLSGTPTMARPFEIYDQVRLLQADLLSTPQGSHDGASKWEFGRNYC-TGVYWQTRSQRPPLAAAKYDGTRCDEELYWLLRNAVLIRRLKKDVMAELPSLVRTVVRVEEGKDGASIWSQQVDSTETEGRIECSFEGGASLKKIRAAYDQNCAAETCLMERMEDEQTELQITWGDSEHRDERKRFVGQSEYHQLGHLKLGGVKEWLADRLLGGWLDAGVVGYEEDAIVEADAPKFVIFAHHLDVLAVLHGFLHNIFVRHRACRRLAFHWSQVQIQGSTPPETRQDLVKRFKNDRYCRMALIGITAGGSGLDLAAASTAVFVELPNSPHWLRQAEDRLHRRGQRRRVQIYYLVLPPGSAEDKVWQCMRRLLRENTAVINSREEAE-ELDVNRVEEFRAQASLPQDAPSQAAELLEG 953
P+ Q GG V +R+ V+ L+ +++ V E+P TL V +L + + + T +VE+ LPR+++ AL FQ +G+RF LRR GRCFI DEMG GKTLQA+A+ C+ +E +L+V PA LR WAE +E+W+PF P+DIH++F D + P VV+ SY+ML++L +M + +I DES + ++ S + + L VA ++LLSGTP+++RPF+I+ Q+ +L LL G K+EF + YC G+ R + + GTR EL LL V+IRRLK+ V+ +LP R +V + K ++ + V + + + DQN +E + D+ D + G+ Y QLG KL +EWL+ L LD ED + + K V+FAHH VL + F+ + + + F V+I G T P RQ V+ F+ ++A+IG+ AGG GLD +AA VF+ELP +P L QAEDR HRRGQ V + Y+ + ++ WQ + + L ++ + + + + E+++ R F+ D S E+LE
Sbjct: 118 PLHYTQNDDGGK-AGVYKIRDYNMVSGCLKRSKSVE-VEEIPWKTLAVVEKLSQSFISGKWQPCIPEHYTEEKVEKLIETLPRKLVSALLPFQLDGLRFGLRRGGRCFIADEMGLGKTLQAIAIAGCFISEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHQDNPAYLPRWPKVVVISYKMLQHLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKT-VLNVAEKVKHIVLLSGTPSISRPFDIFHQINILWPGLL--------GKEKYEFAKTYCEVGL---VRGMQGKIFQDFSKGTRL-LELNILLNQTVMIRRLKQHVLTQLPPKRRQIVTILLKKSDIALATAIVSEANQKANKQNDGTIAEVTENSHEPKDQNAQG--------SNEAGHVNAENSDA---DRENQLCGKLSYQQLGIAKLSAFREWLSLHPLLSGLDYT----PEDIDGDTSSTKMVVFAHHHKVLDGIQEFMCD--------KGIGF----VRIDGMTLPRDRQLAVQSFQFSSEVKVAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNV-YIFCAKDTMDESNWQNLNKKLHRISSTTDGKYDGKTEIEIERAYIFKP------DEESSEREVLEA 720 HSP 2 Score: 96.6709 bits (239), Expect = 3.416e-16 Identity = 106/378 (28.04%), Postives = 155/378 (41.01%), Query Frame = 0
Query: 1217 LLYNLWFEVSKHTGWVHLHEHEDGSKPLGVHVDPLDYYHLTGLAQNALSSLPLLEEIRARAADE-IILEDLPPFIQVAPGEKWQLLKFMTQFQKECARIRNQLYGYVLQPMEGGLQGWIRKHRTNRQRAGRQKASLPPRVLSSWDPDFGYRRHLTYEELFDPSRHSNVTRHVLVTSGRLFRRSFRQPLDPQTHDPLCFCC-----GTAFSLPGGTRTLQDLLCSAACLA-YFACLSRGGLRREVGRRDRGICEMCGLDTLGLLERVKHSSCLKSREMLVVEEVPKFKERPKLLARLVREPKEGHVWQADHIHMVAEGGGLCDTTNGRALCVLCHASVTAEQS---RLGRGDKRRAGREKVKKERGAGMHVERGEWGTT 1584
L+ +L FEVS++TG +HL+ S LG DP H EEI A + E P I P +L+FM +++ + +L G LQ + L+ T+ G + RR+ + E+ P + V + V + SG + +++PLC C G P +DL C AC Y S +R+E+ + + GIC C LD L+ R++ L+ R + + P+ R LL LV EP EG+ W ADHI V +GGG C N R LCV CHA+VTA Q +L R R+ + + + R E G T
Sbjct: 819 LIDSLRFEVSQNTGRIHLY-----SCILGK--DPRPRPHFQNFRP---------EEIEASNPSQGPNKEKNPESITDDPVHVLAILEFMKEWKSLRPIEKRKLLGKPLQ-LPLSLELSYLSESTSHNNEGLLRGG-------------SKRRNTPFSEISIPVPENAVWKKVNLRSGHQKKEKEYTQAWSMSNEPLCKLCQKPCKGNNAKEP---EYFEDLFCDLACYEDYRTRTSSRYIRQELFQIEHGICTNCELDCHQLVRRLRPLP-LEKRRTYINKVAPELFARKNLLETLVNEPTEGNAWHADHIIPVYQGGGECRLENMRTLCVACHANVTAAQCAERKLIRSKARKQLKNTLNELRNNPKQKELPAEGNT 1162
BLAST of EWM24963.1 vs. NCBI_GenBank
Match: gi|1150735296|ref|XP_020241627.1| (LOW QUALITY PROTEIN: DNA annealing helicase and endonuclease ZRANB3 [Asparagus officinalis]) HSP 1 Score: 298.516 bits (763), Expect = 3.083e-79 Identity = 212/618 (34.30%), Postives = 314/618 (50.81%), Query Frame = 0
Query: 319 VVLDVRECENVTRLLREHPTLDLVREVPLPTLRFVSRLLDGEAAREEGGSGFFATPGEVERRFALLPRRVMKALFDFQKEGVRFALRRQGRCFIGDEMGTGKTLQALAVMVCYQTEWPLLIVVPASLRLLWAEVVEKWVPFLRPADIHVIFREADRVSSRSECPPVVITSYEMLRNLEASMTAVAFHCVIFDESQKMATTRAHSALNRVTSAALRVASSAIRVLLLSGTPTMARPFEIYDQVRLLQADLLSTPQGSHDGASKWEFGRNYCTGVYWQTRSQRPPLAAAKYDGTRCDEELYWLLRNAVLIRRLKKDVMAELPSLVRTVVRVEEGK-DGASIWSQQVDSTETEGRIECSFEGGASLKKIRAAYDQNCAAETCLMERMEDEQTELQITWGDSEHRDERKRFVGQSEYHQLGHLKLGGVKEWLADRLLGGWLDAGVVGYEEDAI---VEADAPKFVIFAHHLDVLAVLHGFLHNIFVRHRACRR-LAFHWSQVQIQGSTPPETRQDLVKRFKNDRYCRMALIGITAGGSGLDLAAASTAVFVELPNSPHWLRQAEDRLHRRGQRRRVQIYYLVLPPGSAEDKVWQCMRRLLRENTAVINSREEA-EELDVNRV 930
V +++ E V R LR ++L +++P TL R + + + S + T +V+ LP+ + AL FQ EGVRF+LRR RC I DEMG GKT+QA+A+ C+ E P+LIV PA LR WAE +E W+PFL P DIH++F D + P VV+ S L +I DES + T+ S + T A L++A+ R++LLSGTP+++RPF+IY QV +L LL G K+EF +NYC Q + +K GTR EEL LL ++IRRLK+ V+ +LP R ++R+E K D A I S + F G + K NC++ E + + ++ +++ Q ++G KL G EW ++ G++ EDA +E K VIFAHHL VL + GF+ C++ + F V+I GST RQ V+ F+ + ++A+IGITAGG GLD +AA VF+ELP S + QAEDR HRRGQ V I Y+ + ++ W + R L +++IN + +A +E++V+R+
Sbjct: 126 VACKIKDHELVLRCLRTISGVEL-QDIPPRTLSVAKRFQECVRDQWKPFSQGWYTDEQVDELLEKLPKTLRDALLPFQLEGVRFSLRRGARCLIADEMGLGKTIQAIAIACCFHDEGPILIVCPAVLRYSWAEELEHWLPFLLPKDIHLVFGHQDNPNRTERSPKVVVISXWAL--------------LIVDESHNIRCTKKKSE-SVETEAVLQMAAQVDRIILLSGTPSLSRPFDIYHQVNMLCPRLL--------GKDKYEFAKNYCLMKVVQGCQGKTFKDFSK--GTRL-EELNVLLSQILMIRRLKEHVLTQLPPKRRQIIRLELKKADKAQITSSR-------------FNNGVCMDKQMDELVMNCSSHQSEGSNQNSE------NYNCNHEKECQEKSAKQLSDQEIGLAKLSGFCEWFSNH--------GILRESEDANSMPLELHCRKMVIFAHHLKVLDGIQGFV---------CQKGIQF----VRIDGSTLARDRQTAVENFRLLKEVKIAIIGITAGGVGLDFSAAENVVFLELPKSSSEMLQAEDRAHRRGQTNAVNI-YIFCAKDTLDESHWLRLNRSLFYVSSLINGKADAIQEIEVDRM 675 HSP 2 Score: 95.1301 bits (235), Expect = 9.095e-16 Identity = 102/355 (28.73%), Postives = 152/355 (42.82%), Query Frame = 0
Query: 1221 LWFEVSKHTGWVHLHEHEDG--SKPLGVHVDPLDYYHLTGLAQNALSSLPLLEEIRARAADEIILEDLPPFIQVAPG--EKWQLLKFMTQFQKECARIRNQLYGYVLQPMEGGLQGWIRKHRTNRQRAGRQKASLPPRVLSSWDPDFGYRRHLTYEELFDPSRHSNVTRHVLVTSGRLFRRSFRQPLDPQTHDPLCFCCGTAFS--LPGGTRTLQDLLCSAACLA-YFACLSRGGLRREVGRRDRGICEMCGLDTLGLLERVKHSSCLKSREMLVVEEV-PKFKERPKLLARLVREPKEGHVWQADHIHMVAEGGGLCDTTNGRALCVLCHASVTAEQSRLGRGDKRRAGREKVK 1567
L FEVS++TG +HL+ G S+P + V+ Q L S+ + + + +L++ P F++ +W L+ + Q N+L G LQ + ++ K N G K RV P R L + V + V V S + + Q T +PLC C + L +DL C+ +C Y S+ LR E+ + G+C C LD L+ +K K +E VE V PK ++ L +L+ EP EG+ W ADHI V +GGG C N R LCV CHA VT Q + K+RA +E++K
Sbjct: 833 LRFEVSQYTGRIHLYICVPGKDSRPRPLFVN---------FRQEDLESMTITDSDTRNETTKSLLKENPAFVKTVQSFSNEWNGLRPIQQ---------NKLLGKPLQ-LPLSVELCYLKESINHGSGGLLKGGSKRRV----TPLTSISRSLP---------ENAVWKKVAVCSNISKEKEYFQAW-TDTDEPLCKLCLQQCNGNLAKKPEYFEDLFCNLSCFQEYRIRTSQKALREELFHIEHGVCTQCKLDCHKLVNCLKPLPVAKRKEY--VENVAPKLAKQKNLFDKLIYEPVEGNAWHADHIVPVYKGGGECSLENMRTLCVGCHAEVTKAQQTDRKLAKQRA-KEQLK 1151
BLAST of EWM24963.1 vs. NCBI_GenBank
Match: gi|1137171661|gb|OMO51229.1| (SNF2-related protein [Corchorus capsularis]) HSP 1 Score: 297.745 bits (761), Expect = 5.057e-79 Identity = 206/632 (32.59%), Postives = 307/632 (48.58%), Query Frame = 0
Query: 303 IRPVPPGQRGGGGAWEVVLDVRECENVTRLLREHPTLDLVREVPLPTLRFVSRLLDGEAAREEGGSGFFA-------TPGEVERRFALLPRRVMKALFDFQKEGVRFALRRQGRCFIGDEMGTGKTLQALAVMVCYQTEWPLLIVVPASLRLLWAEVVEKWVPFLRPADIHVIFREADRVSSRSECPPVVITSYEMLRNLEASMTAVAFHCVIFDESQKMATTRAHSALNRVTSAALRVASSAIRVLLLSGTPTMARPFEIYDQVRLLQADLLSTPQGSHDGASKWEFGRNYCTGVYWQTRSQRPPLAAAKYDGTRCDEELYWLLRNAVLIRRLKKDVMAELPSLVRTVVRVEEGKDGASIWSQQVDSTETEGRIECSFEGGASLKKIRAAYDQNCAAETCLMERMEDEQTELQITWGDSEHRDERKRFVGQSEYHQLGHLKLGGVKEWLADRLLGGWLDAGVVGYEEDAIVEAD----APKFVIFAHHLDVLAVLHGFLHNIFVRHRACRR-LAFHWSQVQIQGSTPPETRQDLVKRFKNDRYCRMALIGITAGGSGLDLAAASTAVFVELPNSPHWLRQAEDRLHRRGQRRRVQIYYLVLPPGSAEDKVWQCMRRLLRENTAVINSREEA 922
+ P Q GGG V + + V LR+ ++ ++E+P TLR V E SG + + +V+ LPRR++ L FQ +GV+F LRR GRC I DEMG GKTLQA+A+ C+ E +L+V PA LR WAE +E+W+PF P+DIH++F D + + P VV+ S+ ML L M + ++ DES + +R S + + L +A ++LLSGTP+++RP++I+ Q+ +L LL G +K++F YC + Q+ + G R EEL+ LL V+IRRLK+ VM +LP R V+R++ K S + S G + +D N A + E +E+ H E G+ Y +LG KL G +EW + L E DA+ E D + K +IFAHH VL + F+ C + + F V+I G+T P+ RQ V FK+ ++A+IGITAGG GLD ++A VF+E+P SP + QAEDR HRRGQ V I Y+ + ++ WQ + R L ++ N + +A
Sbjct: 122 VMPSHFTQNSGGGK-AGVFKLADYSYVLSCLRKSRDIE-IKEIPHRTLRVV------ETFSRSFISGHWIPCRPEHLSEEDVDELIGKLPRRLLDVLLPFQLDGVKFGLRRGGRCLIADEMGLGKTLQAIAIAGCFLNEGSILVVCPAVLRYSWAEELERWLPFCLPSDIHLVFGHRDNPAYLKKSPKVVVISFTMLNRLRKIMLEQEWALLVVDESHHLRCSRKASESGEIQT-VLDLAEKVKHIVLLSGTPSLSRPYDIFHQINMLWPGLL--------GETKYKFAETYCAVNFSQSSQGFKDFSK----GIRL-EELHVLLSQTVMIRRLKEHVMVQLPPKRRQVIRLQLKK-----------SDIASAKAAISLSNGDT-------FDNNAAKDAS--ENLEE------------NHDGESYCTSGELSYQELGVAKLRGFREWFSIHPLIA---------ESDAVEEVDTNSGSHKMIIFAHHHKVLDGIQEFI---------CEKGIGF----VRIDGTTLPKDRQSAVMSFKSTNGVKIAIIGITAGGVGLDFSSAQNVVFLEIPQSPSLMLQAEDRAHRRGQTNAVNI-YIFCAKDTMDESNWQALNRSLHRVSSTTNGKYDA 676 HSP 2 Score: 92.0485 bits (227), Expect = 7.418e-15 Identity = 63/181 (34.81%), Postives = 87/181 (48.07%), Query Frame = 0
Query: 1409 DPLC-----FCCGTAFSLPGGTRTLQDLLCSAACLA-YFACLSRGGLRREVGRRDRGICEMCGLDTLGLLERVKHSSCLKSREMLVVEEVPKFKERPKLLARLVREPKEGHVWQADHIHMVAEGGGLCDTTNGRALCVLCHASVTAEQSRLGRGDKRRAGREKVKKERGAGMHVERGEWGT 1583
+PLC C G + +P +DL C C Y S LR+E+ + + G+C C LD L++ +K S + RE + + PK + L +LV +P EG+ W ADHI V GGG C N R LCV CHA VTA Q +RR R K KK+ + ++ R T
Sbjct: 984 EPLCKLCQNLCKGGSAKMP---EYFEDLFCKIGCYEEYRLRTSNRFLRQELFQIEHGVCTNCQLDCHQLVKLLKPLSSARRREY-IAKVAPKIASQKSLYEKLVSDPSEGNAWHADHIVPVYRGGGECRLENMRTLCVACHADVTAAQCA-----ERRLMRIKAKKKLKSVLNELRNSENT 1155
BLAST of EWM24963.1 vs. NCBI_GenBank
Match: gi|567171501|ref|XP_006399262.1| (hypothetical protein EUTSA_v10012481mg [Eutrema salsugineum] >gi|557100352|gb|ESQ40715.1| hypothetical protein EUTSA_v10012481mg [Eutrema salsugineum]) HSP 1 Score: 297.36 bits (760), Expect = 5.896e-79 Identity = 209/647 (32.30%), Postives = 326/647 (50.39%), Query Frame = 0
Query: 313 GGGAWEVVLDVRECENVTRLLREHPTLDLVREVPLPTLRFVSRLLDGE-AAREEGGSGFFATPGEVERRFALLPRRVMKALFDFQKEGVRFALRRQGRCFIGDEMGTGKTLQALAVMVCYQTEWPLLIVVPASLRLLWAEVVEKWVPFLRPADIHVIFREADRVSSRSECPPVVITSYEMLRNLEASMTAVAFHCVIFDESQKMATTRAHSALNRVTSAALRVASSAIRVLLLSGTPTMARPFEIYDQVRLLQADLLSTPQGSHDGASKWEFGRNYC-TGVYWQTRSQRPPLAAAKYDGTRCDEELYWLLRNAVLIRRLKKDVMAELPSLVRTVVRVEEGKDGASIWSQQVDSTETEGRIECSFEGGASLKKIRAAYDQNCAAETCLMERMEDEQTELQITWGDSEHRDERKRFVGQSEYHQLGHLKLGGVKEWLADRLLGGWLDAGVVGYEEDAIVEADAPKFVIFAHHLDVLAVLHGFLHNIFVRHRACRRLAFHWSQVQIQGSTPPETRQDLVKRFKNDRYCRMALIGITAGGSGLDLAAASTAVFVELPNSPHWLRQAEDRLHRRGQRRRVQIYYLVLPPGSAEDKVWQCMRRLLRENTAVINSREEAE-ELDVNRVEEFRA-----QASLPQDAPSQAAELL 951
GG A V +R+ V L+ ++ V E+P T V +L + + E T +VE LPR+++ +L FQ +G+RF LRR GRC I DEMG GKTLQA+A+ C+ +E +L+V PA LR WAE +E+W+PF P+D+H++F + + P VV+ SY ML++L +M + +I DES + ++ S + + + L VA R++LLSGTP+++RPF+I+ Q+ +L LL G +K+EF + YC G+ R + + GTR EL LL V+IRRLK+ V+ +LP R +V V K ++ V +E + + E A A D + ++ + + +S D+ + G+ Y QLG KL +EWL+ L LD E+ + + K VIFAHH VL + F+ + + + F V+I G T P RQ V+ F+ ++A+IG+ AGG GLD +AA VFVELP +P L QAEDR HRRGQ V + Y+ S ++ WQ + + L ++ + + +A+ E++++R F+ + + + PSQA +L
Sbjct: 127 GGKAG--VYKIRDYSMVLGCLKRSKIVE-VEEIPWTTFAVVEKLSQSFISGKWEPSKPEHFTEEKVEELIESLPRKLVNSLLPFQLDGLRFGLRRGGRCLIADEMGLGKTLQAIAIAGCFISEGSILVVCPAVLRFSWAEELERWLPFCLPSDVHLVFGHQNNPAYLPRWPKVVVISYTMLQHLRKTMLEREWALLILDESHHVRCSKKKSEPSEIQT-VLDVAEKVKRIVLLSGTPSLSRPFDIFHQINMLWPGLL--------GKNKYEFAKTYCEVGL---VRGIQGKVFQDFSKGTRL-LELNTLLNQTVMIRRLKQHVLTQLPPKRRQIVTVLLKKSDIALAIAIV----SEANQKTNKENTAITD---ATEDTHAPKGIAQKAHGSNKDGHMNVEDSNSPESDKDDQLRGKLSYQQLGVAKLSAFREWLSLHPLISGLDYA----PEEINGDTSSTKMVIFAHHHKVLDGIQEFICD--------KGIGF----VRIDGMTLPRDRQLAVQSFQCSSEVKVAIIGVEAGGVGLDFSAAQNVVFVELPKTPSLLLQAEDRAHRRGQTSAVNV-YIFCAKDSMDESNWQNLNKKLHRISSTTDGKYDAKTEIEIDRAHLFKTAEESGEREVLEAQPSQANRVL 733 HSP 2 Score: 89.3521 bits (220), Expect = 5.482e-14 Identity = 99/366 (27.05%), Postives = 150/366 (40.98%), Query Frame = 0
Query: 1216 KLLYNLWFEVSKHTGWVHLHEHEDGSKPLGVHVDPLDYYHLTGLAQNALSSLPLLEEIRA-RAADEIILEDLPPFIQVAPGEKWQLLKFMTQFQKECARIRNQLYGYVLQPMEGGLQGWIRKHRTNRQRAGRQKASLPPRVLSSWDPDFGYRRHLTYEELFDPSRHSNVTRHVLVTSGRLFRRSFRQPLDPQTHDPLCFCC-----GTAFSLPGGTRTLQDLLCSAACLA-YFACLSRGGLRREVGRRDRGICEMCGLDTLGLLERVKHSSCLKSREMLVVEEVPKFKERPKLLARLVREPKEGHVWQADHIHMVAEGGGLCDTTNGRALCVLCHASVTAEQS---RLGRGDKRRAGREKVKKERG 1571
+L+ +L FEVS++TG +HL+ G P P + QN EEI A ++ E P I P +L+F+ +++ + +L G LQ + L+ T+ G + RR+ + E+ + V + V + SG + + +PLC C G P +DL C C Y S +R+E+ + + GIC C LD L+ R++ K RE + + P+ R LL LV +P EG+ W ADHI V GGG C N R LCV CHA VT Q +L R + R+ + +K+ R
Sbjct: 822 QLVNSLRFEVSQNTGRIHLYSCISGKDP-----RPRPQF------QNFRP-----EEIEASNSSPGFNKEKTPESISDDPDHVLAILEFIKEWKTLRPIEKRKLLGKPLQ-LPLSLELSYLSENTSHNSEGLLRGG-------------SKRRNTPFSEISFTLPPNAVWKKVNLRSGYQRKEKEYTQAWSMSSEPLCKLCQKPCKGNNAKEP---EYFEDLFCDLKCYEDYRTRTSSSYIRQELFQIEHGICTNCDLDCHQLVRRIRPLPLEKRREY-IKKVAPELFARKNLLETLVNDPTEGNAWHADHIIPVYRGGGECRLENMRTLCVACHADVTVGQCAERKLIRSEARKQLKNTLKELRN 1153 The following BLAST results are available for this feature:
BLAST of EWM24963.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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