EWM24974.1, cds5706 (CDS) Nannochloropsis gaditana

Overview
NameEWM24974.1
Unique Namecds5706
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:674861..674982 -
Alignment locationCM002466.1:674164..674656 -
Alignment locationCM002466.1:672988..673974 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24974.1
Productnucleolar protein expressed
Orig transcript idgnl|cribi|Naga_100186g2.5613.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:674861..674982 -
CM002466.1supercontigCM002466.1:674164..674656 -
CM002466.1supercontigCM002466.1:672988..673974 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR002687Nop_dom
IPR012974NOP5_N
IPR012976NOSIC
Homology
BLAST of EWM24974.1 vs. NCBI_GenBank
Match: gi|585106606|gb|EWM24974.1| (nucleolar protein expressed [Nannochloropsis gaditana])

HSP 1 Score: 1070.07 bits (2766), Expect = 0.000e+0
Identity = 533/533 (100.00%), Postives = 533/533 (100.00%), Query Frame = 0
Query:    1 MLLLFETPAGYALFKVLKESKLQDVENLWKEFEDPEKASSIVKLKAFRPFDGTAEAVAAASDIIESNLGKELKKFLKKSIKDKEMSEQLAVADHKLGGLIKDKLGLNIATGEIASELFRGVRTQLDSLLTGLSDSNLKQMQLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPELVKIVNDNVQYAKLVVRVGMRTGFKNQDLSDILGDDAVEQSVKESAEISMGQEISENDLASIRSLAQEVVDLAAYRINLFEYLKNRMHAIAPNLTIMVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAQPKHKGKISRVLAAKTALAIRVDAMGDETDTSMGEEARSKVEFRLRQLEGGHKTSLTGGMRGSSSGNGGPAKYDKKAALGEGEGDGYNEASDMVGVTTEVGSAEKKKKKKEKEKRKRESEGAGAEEGGMGASNGQALEIEEETPSKKKKKKSKTEASTGAEEEEEESPKKKKKKDKKKEK 533
            MLLLFETPAGYALFKVLKESKLQDVENLWKEFEDPEKASSIVKLKAFRPFDGTAEAVAAASDIIESNLGKELKKFLKKSIKDKEMSEQLAVADHKLGGLIKDKLGLNIATGEIASELFRGVRTQLDSLLTGLSDSNLKQMQLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPELVKIVNDNVQYAKLVVRVGMRTGFKNQDLSDILGDDAVEQSVKESAEISMGQEISENDLASIRSLAQEVVDLAAYRINLFEYLKNRMHAIAPNLTIMVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAQPKHKGKISRVLAAKTALAIRVDAMGDETDTSMGEEARSKVEFRLRQLEGGHKTSLTGGMRGSSSGNGGPAKYDKKAALGEGEGDGYNEASDMVGVTTEVGSAEKKKKKKEKEKRKRESEGAGAEEGGMGASNGQALEIEEETPSKKKKKKSKTEASTGAEEEEEESPKKKKKKDKKKEK
Sbjct:    1 MLLLFETPAGYALFKVLKESKLQDVENLWKEFEDPEKASSIVKLKAFRPFDGTAEAVAAASDIIESNLGKELKKFLKKSIKDKEMSEQLAVADHKLGGLIKDKLGLNIATGEIASELFRGVRTQLDSLLTGLSDSNLKQMQLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPELVKIVNDNVQYAKLVVRVGMRTGFKNQDLSDILGDDAVEQSVKESAEISMGQEISENDLASIRSLAQEVVDLAAYRINLFEYLKNRMHAIAPNLTIMVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAQPKHKGKISRVLAAKTALAIRVDAMGDETDTSMGEEARSKVEFRLRQLEGGHKTSLTGGMRGSSSGNGGPAKYDKKAALGEGEGDGYNEASDMVGVTTEVGSAEKKKKKKEKEKRKRESEGAGAEEGGMGASNGQALEIEEETPSKKKKKKSKTEASTGAEEEEEESPKKKKKKDKKKEK 533          
BLAST of EWM24974.1 vs. NCBI_GenBank
Match: gi|298711133|emb|CBJ32359.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 592.038 bits (1525), Expect = 0.000e+0
Identity = 294/447 (65.77%), Postives = 353/447 (78.97%), Query Frame = 0
Query:    1 MLLLFETPAGYALFKVLKESKLQDVENLWKEFEDPEKASSIVKLKAFRPFDGTAEAVAAASDIIESNLGKELKKFLKKSIKDKEMSEQLAVADHKLGGLIKDKLGLNIATGEIASELFRGVRTQLDSLLTGLSDSNLKQMQLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPELVKIVNDNVQYAKLVVRVGMRTGFKNQDLSDILGDDAVEQSVKESAEISMGQEISENDLASIRSLAQEVVDLAAYRINLFEYLKNRMHAIAPNLTIMVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAQPKHKGKISRVLAAKTALAIRVDAMGDETDTSMGEEARSKVEFRLRQLEGGHKTSLTGGMRGSSSGNGGPAKYDKKAALGEGEGDGYNEASDMV 447
            ML+LFETPAGYALFK+  ES L+D + ++ EF  PEKA+  VKLKAF  F  TA+AVAA++++I+S +GK LKKFL K+I  KE+ ++LAV+D KL   IKDKL +         EL RG+R QLD LLT + D NLK M+LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRV+EW+GWHFPE+ KI+NDN+ YAK+VVR+G+RT  KN D SDI+ D+ + + +KE+AE+SMG EI+  D+ SI+SLA +VV L+ YR+ L EYL++RM AIAPNLTIMVGELVGARLIAHAGSL+NLAK PAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQA PK+KGKISRVLAAK ALAIRVDA+ DETDT++G E+RSKVE RLRQLEGG +      +  +        KYD KAA+  G    ++   DMV
Sbjct:    1 MLVLFETPAGYALFKMTNESILKDADGIYDEFSTPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIVKKELKDKLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTSVGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLRQLEGGARL-----LEAAPKTPTQVKKYDSKAAVA-GTPKTFSTGEDMV 441          
BLAST of EWM24974.1 vs. NCBI_GenBank
Match: gi|669164970|ref|XP_008618047.1| (hypothetical protein SDRG_13728 [Saprolegnia diclina VS20] >gi|530730157|gb|EQC28399.1| hypothetical protein SDRG_13728 [Saprolegnia diclina VS20])

HSP 1 Score: 583.178 bits (1502), Expect = 0.000e+0
Identity = 289/446 (64.80%), Postives = 346/446 (77.58%), Query Frame = 0
Query:    1 MLLLFETPAGYALFKVLKESKLQDVENLWKEFEDPEKASSIVKLKAFRPFDGTAEAVAAASDIIESNLGKELKKFLKKSIKDKEMSEQLAVADHKLGGLIKDKLGLNIATGEIASELFRGVRTQLDSLLTGLSDSNLKQMQLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPELVKIVNDNVQYAKLVVRVGMRTGFKNQDLSDILGDDAVEQSVKESAEISMGQEISENDLASIRSLAQEVVDLAAYRINLFEYLKNRMHAIAPNLTIMVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAQPKHKGKISRVLAAKTALAIRVDAMGDETDTSMGEEARSKVEFRLRQLEGGHKTSLTGGMRGSSSGNGGPAKYDKKAALGEGEGDGYNEASDM 446
            ML+LFET AG+ALFKV  E KL +V+++ K F   +KAS +VKLKAF  F  T EAVAAA+D  +  +GK LKKFLKK +KD  +S++LAV D   GG+IK+KLG+     +   EL RG+RT + SL++GL D +LK M LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREW+GWHFPE+ KIV DN+QYA+ VV++G+RT  K+ D SDIL  D VE S++E  E+SMG +ISE D+ +I SL ++V+ L  YR  LF+YLKNRM+AIAPNLT+MVGELVGARLIAHAGSL+NLAKHPAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQ  PKHKGKISRVLAAKTALA+RVDA+GD T+ ++G + R+KVE R+RQLE G     TG   G       P KY K+A         YN+A+DM
Sbjct:    1 MLVLFETAAGHALFKVQDEGKLANVDDIHKHFASSDKASQVVKLKAFNAFKDTTEAVAAAADCTDGTVGKSLKKFLKKHVKDAGVSDKLAVMDKAFGGIIKEKLGIQCVHDKSVDELMRGIRTHMSSLISGLEDQDLKNMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWFGWHFPEMGKIVTDNLQYARTVVKMGIRTNVKSLDFSDILSSD-VEASMREVCEVSMGTDISEEDVINIGSLCEQVISLTEYRGQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKVEARMRQLENG----FTGIASGKGKAKNDPKKYVKEATPAT---QVYNDANDM 438          
BLAST of EWM24974.1 vs. NCBI_GenBank
Match: gi|813177545|ref|XP_012205242.1| (hypothetical protein SPRG_10894 [Saprolegnia parasitica CBS 223.65] >gi|641529958|gb|KDO24106.1| hypothetical protein SPRG_10894 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 580.482 bits (1495), Expect = 0.000e+0
Identity = 290/448 (64.73%), Postives = 348/448 (77.68%), Query Frame = 0
Query:    1 MLLLFETPAGYALFKVLKESKLQDVENLWKEFEDPEKASSIVKLKAFRPFDGTAEAVAAASDIIESNLGKELKKFLKKSIKDKEMSEQLAVADHKLGGLIKDKLGLNIATGEIASELFRGVRTQLDSLLTGLSDSNLKQMQLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPELVKIVNDNVQYAKLVVRVGMRTGFKNQDLSDILGDDAVEQSVKESAEISMGQEISENDLASIRSLAQEVVDLAAYRINLFEYLKNRMHAIAPNLTIMVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAQPKHKGKISRVLAAKTALAIRVDAMGDETDTSMGEEARSKVEFRLRQLEGGHKTSLTGGMRGSSSGNGGPAKYDKKAALGEGEGDG--YNEASDM 446
            ML+LFET AG+ALFKV  E KL +V+++ K F   +KAS +VKLKAF  F  T EAVAAA+D  +  +GK LKKFLKK +KD  +S++LAV D   GG+IK+KLG+     +   EL RG+RT ++SL++GL D +LK M LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREW+GWHFPE+ KIV DN+QYA+ VV++G+RT  K+ D SDIL  D VE S++E  E+SMG +ISE D+ +I SL ++V+ L  YR  LF+YLKNRM+AIAPNLT+MVGELVGARLIAHAGSL+NLAKHPAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQ  PKHKGKISRVLAAKTALA+RVDA+GD T+ ++G + R+KVE R+RQLE         G  G +SG  G AK D K  + E       YN+A DM
Sbjct:    1 MLVLFETAAGHALFKVQDEGKLANVDDIHKHFASSDKASQVVKLKAFNAFKDTTEAVAAAADCTDGTVGKSLKKFLKKHVKDAGVSDKLAVMDKAFGGIIKEKLGIQCVHDKSVDELMRGIRTHMNSLISGLEDQDLKNMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWFGWHFPEMGKIVTDNLQYARTVVKMGVRTNVKSLDFSDILSSD-VEASMREVCEVSMGTDISEEDVINIGSLCEQVISLTEYRGQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKVEARMRQLE--------NGFTGIASGK-GKAKTDAKKYVKEATPATKVYNDADDM 438          
BLAST of EWM24974.1 vs. NCBI_GenBank
Match: gi|953501472|emb|CEG37473.1| (Ribosome biogenesis protein-Nop58p/Nop5p [Plasmopara halstedii])

HSP 1 Score: 569.311 bits (1466), Expect = 0.000e+0
Identity = 278/446 (62.33%), Postives = 342/446 (76.68%), Query Frame = 0
Query:    1 MLLLFETPAGYALFKVLKESKLQDVENLWKEFEDPEKASSIVKLKAFRPFDGTAEAVAAASDIIESNLGKELKKFLKKSIKDKEMSEQLAVADHKLGGLIKDKLGLNIATGEIASELFRGVRTQLDSLLTGLSDSNLKQMQLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPELVKIVNDNVQYAKLVVRVGMRTGFKNQDLSDILGDDAVEQSVKESAEISMGQEISENDLASIRSLAQEVVDLAAYRINLFEYLKNRMHAIAPNLTIMVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAQPKHKGKISRVLAAKTALAIRVDAMGDETDTSMGEEARSKVEFRLRQLEGGHKTSLTGGMRGSSSGNGGPAKYDKKAALGEGEGDGYNEASDM 446
            ML+LFET AG+ALFKV  E+KL   ++++K F  PEKA+ ++KLK F  F  T EAVAAA+++++  +GK L+KFLKK++ D  + ++LAV+D  LG +IK+KL +        +E+ RG+R  +D+L+TGL D +LK M LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTY+MRVREW+GWHFPE+ KIV DN+QYAK V ++GMRT  K+ D SDIL +D VE S++E  EISMG +ISE D+ +I +L  +V+ L  YR  LF+YLKNRM+AIAPNLT+MVGELVGARLIAHAGSL+NLAKHPAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQ  PKHKGKISRVLAAKTALA+RVDA+GD T+ ++G + R+KVE R+RQLE         G  G  + NG      KK    E     YN  +DM
Sbjct:    1 MLVLFETAAGHALFKVQDEAKLASADDVYKYFATPEKATKVLKLKGFNAFKNTTEAVAAATEMVDGKMGKTLRKFLKKNVVDAGLKDKLAVSDKALGAIIKEKLSIACVNDTAVNEIMRGIRANMDTLITGLEDDDLKAMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYSMRVREWFGWHFPEMGKIVTDNLQYAKCVRKMGMRTQVKSLDFSDILSED-VEASMREVCEISMGTDISEEDVTNISALCDQVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKVEARVRQLE--------NGFSGVPNSNGKTKNEAKKYVKTE-TSKSYNADADM 436          
BLAST of EWM24974.1 vs. NCBI_GenBank
Match: gi|698807710|ref|XP_009836884.1| (hypothetical protein H257_11594 [Aphanomyces astaci] >gi|574107949|gb|ETV73458.1| hypothetical protein H257_11594 [Aphanomyces astaci])

HSP 1 Score: 563.533 bits (1451), Expect = 0.000e+0
Identity = 283/446 (63.45%), Postives = 343/446 (76.91%), Query Frame = 0
Query:    1 MLLLFETPAGYALFKVLKESKLQDVENLWKEFEDPEKASSIVKLKAFRPFDGTAEAVAAASDIIESNLGKELKKFLKKSIKDKEMSEQLAVADHKLGGLIKDKLGLNIATGEIASELFRGVRTQLDSLLTGLSDSNLKQMQLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPELVKIVNDNVQYAKLVVRVGMRTGFKNQDLSDILGDDAVEQSVKESAEISMGQEISENDLASIRSLAQEVVDLAAYRINLFEYLKNRMHAIAPNLTIMVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAQPKHKGKISRVLAAKTALAIRVDAMGDETDTSMGEEARSKVEFRLRQLEGGHKTSLTGGMRGSSSGNGGPAKYDKKAALGEGEGDGYNEASDM 446
            ML+LFET AG+ALFKV  E KL +V+++ K F   +KA+S VKLKAF  F  T EAVAAA+D +++ +GK LKKFLKK +KD  +S++LAV D   GG+IK+KLG+         EL RG+RT ++SL++GL D +LK M LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTY+MRVREW+GWHFPE+ KIV DN+QYA++V++ G R   KN D SDIL  D VE S++E  E+SMG +ISE D+ +I SL  +V+ L  YR  LF+YLKNRM+AIAPNLT+MVGELVGARLIAHAGSL+NLAKHPAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQ  PKHKGKISRVLAAKT+LA+RVDA+GD T+ ++G + R+KVE R+RQLE G     TG + G         KY K+          YN+A D+
Sbjct:    1 MLVLFETAAGHALFKVQDEGKLTNVDDIHKHFATADKANSFVKLKAFNAFKDTTEAVAAAADCVDNTVGKSLKKFLKKHVKDAGLSDKLAVVDKAFGGVIKEKLGIQCVHDASIQELLRGIRTHMNSLISGLDDQDLKSMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYSMRVREWFGWHFPEMGKIVTDNLQYARVVLKTGTRPHVKNLDFSDILSSD-VEASMREVCEVSMGTDISEEDVLNIGSLCTQVISLTEYRTQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTSLAVRVDALGDATEATIGFDNRAKVEARMRQLENG----FTGVVSGKGKAKNEVKKYVKEPV---AAVKSYNDAEDI 438          
BLAST of EWM24974.1 vs. NCBI_GenBank
Match: gi|1173929760|gb|OQR82937.1| (nucleolar protein NOP5 [Achlya hypogyna])

HSP 1 Score: 558.525 bits (1438), Expect = 0.000e+0
Identity = 303/509 (59.53%), Postives = 369/509 (72.50%), Query Frame = 0
Query:    1 MLLLFETPAGYALFKVLKESKLQDVENLWKEFEDPEKASSIVKLKAFRPFDGTAEAVAAASDIIESNLGKELKKFLKKSIKDKEMSEQLAVADHKLGGLIKDKLGLNIATGEIASELFRGVRTQLDSLLTGLSDSNLKQMQLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPELVKIVNDNVQYAKLVVRVGMRTGFKNQDLSDILGDDAVEQSVKESAEISMGQEISENDLASIRSLAQEVVDLAAYRINLFEYLKNRMHAIAPNLTIMVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAQPKHKGKISRVLAAKTALAIRVDAMGDETDTSMGEEARSKVEFRLRQLEGGHKTSLTGGMRGSSSGNGGPAKYDKKAALGEGE-GDGYNEASDMVGVTTEVGSAEKKKKKKEKEKRKRESEGAGAEEGGMGASNGQALEIEEETPSKKKKKKSKTE 508
            ML+LFET AG+ALFKV  E KL +V+++ K F   +KAS +VKLKAF  F  T EAVAAA+D  +  +GK LKKFLKK +KD   +++LAV D   GG+IK+KLG+     +   EL RG+RT ++SL++GL D +LK M LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREW+GWHFPE+ KIV DN+QYA+ VV++G+RT  K+ D SDIL  D VE S++E  E+SMG +ISE D+ +I SL ++V+ L  YR  LF+YLKNRM+AIAPNLT+MVGELVGARLIAHAGSL+NLAKHPAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQ  PKHKGKISRVLAAKTALA+RVDA+GD T+ ++G + RSKVE R+RQLE G          G +SG G  AK D K  + E +    YN+A D+           K  K+K +E  + E +    ++            +E     KKKKKK K E
Sbjct:    1 MLVLFETAAGHALFKVQDEGKLANVDDIHKHFASADKASQVVKLKAFNAFKDTTEAVAAAADCTDGTVGKSLKKFLKKHVKDAGAADKLAVMDKAFGGIIKEKLGIQCVHDKSVDELMRGIRTHMNSLISGLEDQDLKNMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWFGWHFPEMGKIVTDNLQYARTVVKMGVRTNVKSLDFSDILSSD-VEASMREVCEVSMGTDISEEDVINIGSLCEQVISLTEYRGQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRSKVEARMRQLENG--------FTGIASGKG-KAKNDTKKYVKEDKPSKAYNDADDV-----------KLTKRKAEEAPEEEKKAKKEKKAKKEKKAEVEEAVEPVEKEKKKKKKKKAE 488          
BLAST of EWM24974.1 vs. NCBI_GenBank
Match: gi|301108005|ref|XP_002903084.1| (nucleolar protein NOP5 [Phytophthora infestans T30-4] >gi|262097456|gb|EEY55508.1| nucleolar protein NOP5 [Phytophthora infestans T30-4])

HSP 1 Score: 557.37 bits (1435), Expect = 0.000e+0
Identity = 287/499 (57.52%), Postives = 357/499 (71.54%), Query Frame = 0
Query:    1 MLLLFETPAGYALFKVLKESKLQDVENLWKEFEDPEKASSIVKLKAFRPFDGTAEAVAAASDIIESNLGKELKKFLKKSIKDKEMSEQLAVADHKLGGLIKDKLGLNIATGEIASELFRGVRTQLDSLLTGLSDSNLKQMQLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPELVKIVNDNVQYAKLVVRVGMRTGFKNQDLSDILGDDAVEQSVKESAEISMGQEISENDLASIRSLAQEVVDLAAYRINLFEYLKNRMHAIAPNLTIMVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAQPKHKGKISRVLAAKTALAIRVDAMGDETDTSMGEEARSKVEFRLRQLEGGHKTSLTGGMRGSSSGNGGPAKYDKKAALGEGEGDGYNEASDMVGVTTEVGSAEKKKKKKEKEKRKRESEGAGAEEGGMGASNGQALEIEEETPSK 499
            ML+LFET AG+ALFKV  E+KL + ++++K F  PEKA+ ++KLK F  F  T EAVAAA+D+++  +GK LKKFLKK++ D  + ++LAV+D  LG LIK+KL +        +E+ RG+R  +D+L+TGL D +LK M LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTY+MRVREW+GWHFPE+ KIV DN+QYAK V+++GMRT  K+ D SDIL +D VE S++E  E+SMG +ISE D+ +I +L ++V+ L  YR  LF+YLKNRM+AIAPNLT+MVGELVGARLIAHAGSL+NLAKHPAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQ  PKHKGKISRVLAAKTALA+RVDA+GD T+ ++G + R+KVE R+RQLE G          G  + NG      KK    E     YN  +DM        +   KK+K E    + E                     ++E   K
Sbjct:   24 MLVLFETAAGHALFKVQDEAKLANADDVFKHFSTPEKAAKVLKLKGFNAFKDTTEAVAAATDMVDGKMGKTLKKFLKKNVVDVGLKDKLAVSDKALGSLIKEKLSIACVNDSAVNEVMRGIRANMDTLITGLEDDDLKAMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYSMRVREWFGWHFPEMGKIVTDNLQYAKCVLKMGMRTQVKSLDFSDILSED-VEASMREVCEVSMGTDISEEDVTNISALCEQVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDSTEATIGFDNRAKVEARVRQLENG--------FSGVPNSNGKTKNESKKYVKTE-TSKSYNADADM--------TVSSKKRKAEAADDEDEEPKV-----------------KKEKKDK 487          
BLAST of EWM24974.1 vs. NCBI_GenBank
Match: gi|695431987|ref|XP_009530825.1| (hypothetical protein PHYSODRAFT_246404 [Phytophthora sojae] >gi|348673577|gb|EGZ13396.1| hypothetical protein PHYSODRAFT_246404 [Phytophthora sojae])

HSP 1 Score: 556.599 bits (1433), Expect = 0.000e+0
Identity = 286/498 (57.43%), Postives = 360/498 (72.29%), Query Frame = 0
Query:    1 MLLLFETPAGYALFKVLKESKLQDVENLWKEFEDPEKASSIVKLKAFRPFDGTAEAVAAASDIIESNLGKELKKFLKKSIKDKEMSEQLAVADHKLGGLIKDKLGLNIATGEIASELFRGVRTQLDSLLTGLSDSNLKQMQLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPELVKIVNDNVQYAKLVVRVGMRTGFKNQDLSDILGDDAVEQSVKESAEISMGQEISENDLASIRSLAQEVVDLAAYRINLFEYLKNRMHAIAPNLTIMVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAQPKHKGKISRVLAAKTALAIRVDAMGDETDTSMGEEARSKVEFRLRQLEGGHKTSLTGGMRGSSSGNGGPAKYDKKAALGEGEGDGYNEASDMVGVTTEVGSAEKKKKKKEKEKRKRESEGAGAEEGGMGASNGQALEIEEETPS 498
            ML+LFET AG+ALFKV  E+KL + ++++K F  PEKA+ ++KLK F  F  T EAVAAA+D+++  +GK LKKFLKK++ D  + ++LAV+D  LG LIKDKL ++       +E+ RG+R  +D+L+TGL D +LK M LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTY+MRVREW+GWHFPE+ KIV DN+QYAK V+++G+R+  K+ D SDIL +D VE S++E  E+SMG +ISE D+ +I +L ++V+ L  YR  LF+YLKNRM+AIAPNLT+MVGELVGARLIAHAGSL+NLAKHPAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQ  PKHKGKISRVLAAKTALA+RVDA+GD T+ ++G + R+KVE R+RQLE G       G+  S+    G  K + K  +       YN  +DM      V S++K+K +   E                           EE P 
Sbjct:    1 MLVLFETAAGHALFKVQDEAKLANADDVFKHFATPEKAAKVLKLKGFNAFKDTTEAVAAATDMVDGKMGKTLKKFLKKNVVDAGLKDKLAVSDKALGSLIKDKLSISCVNDSAVNEVMRGIRANMDTLITGLEDDDLKAMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYSMRVREWFGWHFPEMGKIVTDNLQYAKCVLKMGVRSKVKSLDFSDILSED-VEASMREVCEVSMGTDISEEDVTNISALCEQVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKVEARVRQLENGF-----SGIPNSN----GKTKNEAKKYVKTETSKSYNADADMT-----VSSSKKRKAEDADE---------------------------EEEPK 456          
BLAST of EWM24974.1 vs. NCBI_GenBank
Match: gi|1173956130|gb|OQS03001.1| (nucleolar protein NOP5 [Thraustotheca clavata])

HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0
Identity = 281/446 (63.00%), Postives = 341/446 (76.46%), Query Frame = 0
Query:    1 MLLLFETPAGYALFKVLKESKLQDVENLWKEFEDPEKASSIVKLKAFRPFDGTAEAVAAASDIIESNLGKELKKFLKKSIKDKEMSEQLAVADHKLGGLIKDKLGLNIATGEIASELFRGVRTQLDSLLTGLSDSNLKQMQLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPELVKIVNDNVQYAKLVVRVGMRTGFKNQDLSDILGDDAVEQSVKESAEISMGQEISENDLASIRSLAQEVVDLAAYRINLFEYLKNRMHAIAPNLTIMVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAQPKHKGKISRVLAAKTALAIRVDAMGDETDTSMGEEARSKVEFRLRQLEGGHKTSLTGGMRGSSSGNGGPAKYDKKAALGEGEGDGYNEASDM 446
            ML+LFET AG+ALFKV  E KL + +++ K F   +KA+ +VKLKAF  F  T EAVAAA+D  +  +GK LKKFLKK +KD  +S++LAV D   GG+IK+KLG+     +   EL RG+RT ++SL++GL D  LK M LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREW+GWHFPE+ KIV DN+QYA+ V+++G+R   K  D SDIL  D VE S++E  E+SMG +IS+ D+ +I +L ++V+ L  YR  LF+YLKNRM+AIAPNLT+MVGELVGARLIAHAGSL+NLAKHPAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQ  PKHKGKISRVLAAKTALA+RVDA+GD T+ ++G + R+KVE R+RQLE         G  G +SG G      KK    +     YN+A DM
Sbjct:    1 MLVLFETAAGHALFKVQDEGKLSNADDIHKHFASADKAAQVVKLKAFNAFKDTTEAVAAAADCTDGTVGKGLKKFLKKHVKDAGVSDKLAVMDKAFGGIIKEKLGIQCVHDKSVEELMRGIRTHMNSLISGLEDQELKNMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWFGWHFPEMGKIVTDNLQYARTVLKMGIRVNVKTLDFSDILSSD-VEASMREVCEVSMGTDISDEDVINIGALCEQVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKVEARMRQLE--------NGFTGVASGKGKAKSDTKKYVKDDKSSKSYNDAEDM 437          
The following BLAST results are available for this feature:
BLAST of EWM24974.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106606|gb|EWM24974.1|0.000e+0100.00nucleolar protein expressed [Nannochloropsis gadit... [more]
gi|298711133|emb|CBJ32359.1|0.000e+065.77conserved unknown protein [Ectocarpus siliculosus][more]
gi|669164970|ref|XP_008618047.1|0.000e+064.80hypothetical protein SDRG_13728 [Saprolegnia dicli... [more]
gi|813177545|ref|XP_012205242.1|0.000e+064.73hypothetical protein SPRG_10894 [Saprolegnia paras... [more]
gi|953501472|emb|CEG37473.1|0.000e+062.33Ribosome biogenesis protein-Nop58p/Nop5p [Plasmopa... [more]
gi|698807710|ref|XP_009836884.1|0.000e+063.45hypothetical protein H257_11594 [Aphanomyces astac... [more]
gi|1173929760|gb|OQR82937.1|0.000e+059.53nucleolar protein NOP5 [Achlya hypogyna][more]
gi|301108005|ref|XP_002903084.1|0.000e+057.52nucleolar protein NOP5 [Phytophthora infestans T30... [more]
gi|695431987|ref|XP_009530825.1|0.000e+057.43hypothetical protein PHYSODRAFT_246404 [Phytophtho... [more]
gi|1173956130|gb|OQS03001.1|0.000e+063.00nucleolar protein NOP5 [Thraustotheca clavata][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5721rna5721Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications