EWM24986.1, cds5686 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24986.1 vs. NCBI_GenBank
Match: gi|585106619|gb|EWM24986.1| (Cupin, RmlC-type [Nannochloropsis gaditana]) HSP 1 Score: 719.539 bits (1856), Expect = 0.000e+0 Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0
Query: 1 MVAQTVLPPTYTASQPALEKDGIIYEYTSAADPSVSPIPYLALGSSHHEEGPTRVIPFDLGEKLDVPYQATSPNLLAAYIRILPGESLETQARATSQAFYVIRGRGVSSSQEHGEIRWKAGDLFVLPASAAAVRHAATGVGLEAGGEAAALYWVSDEPLLRYLGVTASEKKFEPTLYTRERMVASVELLKHEEGVEHRNRLGILLGNRMTEANTLTLTHTLWSLLNLLPAGQKQRPHRHNSVALDLCVSAAPQGTYTLMGPELDADGWVKDPIRLEWASGACFVTPPGWWHSHHNDTDQDAWVLPLQDAGLHTHMRTLKIEFSTAEKGAEDSTASSTSSVESDKTTAALTSP 352
MVAQTVLPPTYTASQPALEKDGIIYEYTSAADPSVSPIPYLALGSSHHEEGPTRVIPFDLGEKLDVPYQATSPNLLAAYIRILPGESLETQARATSQAFYVIRGRGVSSSQEHGEIRWKAGDLFVLPASAAAVRHAATGVGLEAGGEAAALYWVSDEPLLRYLGVTASEKKFEPTLYTRERMVASVELLKHEEGVEHRNRLGILLGNRMTEANTLTLTHTLWSLLNLLPAGQKQRPHRHNSVALDLCVSAAPQGTYTLMGPELDADGWVKDPIRLEWASGACFVTPPGWWHSHHNDTDQDAWVLPLQDAGLHTHMRTLKIEFSTAEKGAEDSTASSTSSVESDKTTAALTSP
Sbjct: 1 MVAQTVLPPTYTASQPALEKDGIIYEYTSAADPSVSPIPYLALGSSHHEEGPTRVIPFDLGEKLDVPYQATSPNLLAAYIRILPGESLETQARATSQAFYVIRGRGVSSSQEHGEIRWKAGDLFVLPASAAAVRHAATGVGLEAGGEAAALYWVSDEPLLRYLGVTASEKKFEPTLYTRERMVASVELLKHEEGVEHRNRLGILLGNRMTEANTLTLTHTLWSLLNLLPAGQKQRPHRHNSVALDLCVSAAPQGTYTLMGPELDADGWVKDPIRLEWASGACFVTPPGWWHSHHNDTDQDAWVLPLQDAGLHTHMRTLKIEFSTAEKGAEDSTASSTSSVESDKTTAALTSP 352
BLAST of EWM24986.1 vs. NCBI_GenBank
Match: gi|693500894|emb|CEF97267.1| (RmlC-like jelly roll fold [Ostreococcus tauri]) HSP 1 Score: 369.392 bits (947), Expect = 3.679e-123 Identity = 183/304 (60.20%), Postives = 222/304 (73.03%), Query Frame = 0
Query: 24 IYEYTSAADPSVSPIPYLALGSSHHEEGPTRVIPFDLGEKLDVPYQATSPNLLAAYIRILPGESLETQARATSQAFYVIRGRGVSSSQEHGEIRWKAGDLFVLPASAAAVRHAATGVGLEAGGEAAALYWVSDEPLLRYLGVT-ASEKKFEPTLYTRERMVASVELLKHEEGVEHRNRLGILLGNRMTEANTLTLTHTLWSLLNLLPAGQKQRPHRHNSVALDLCVSAAPQGTYTLMGPELDADGWVKDPIRLEWASGACFVTPPGWWHSHHNDTDQDAWVLPLQDAGLHTHMRTLKIEFSTAE 326
I+EY SAA+P + PIP L + HE G TRVIPFD+ + LD+ TSPNL+A+++RI+ GES+ET A+ATSQAFYVIRG G S S EHG+I W GD+FVLP + V HA + EA G AALYWV DEPL++YLGV+ A EKKFEPTLY RE+M+ VE +KH+ G + NR G+LLGN + T TLTH LWSLLN +PA QRPHRHNSVALDL V+A P G YTLMG E+D+ G++ DPIR +W G FVTPPGWWHSHHN++D AWVLP+QDAGL+TH RTL I F E
Sbjct: 37 IFEYGSAANPDMRPIPVLVHPADLHESGETRVIPFDINDFLDITESCTSPNLMASFVRIVKGESIETSAKATSQAFYVIRGSGESES-EHGKISWSTGDMFVLPVTKGGVTHAC--IDAEAKG-GAALYWVHDEPLMQYLGVSPADEKKFEPTLYRREQMLERVEEIKHDSGASN-NRCGVLLGNSAC-SQTKTLTHVLWSLLNSIPAKTVQRPHRHNSVALDLAVAAKP-GVYTLMGKEIDSQGFIIDPIRCDWIEGGVFVTPPGWWHSHHNESDDVAWVLPMQDAGLYTHQRTLDIRFVDDE 333
BLAST of EWM24986.1 vs. NCBI_GenBank
Match: gi|255073367|ref|XP_002500358.1| (predicted protein [Micromonas commoda] >gi|226515621|gb|ACO61616.1| predicted protein [Micromonas commoda]) HSP 1 Score: 367.081 bits (941), Expect = 5.781e-122 Identity = 176/303 (58.09%), Postives = 225/303 (74.26%), Query Frame = 0
Query: 24 IYEYTSAADPSVSPIPYLALGSSHHEEGPTRVIPFDLGEKLDVPYQATSPNLLAAYIRILPGESLETQARATSQAFYVIRGRGVSSSQEHGEIRWKAGDLFVLPASAAAVRHAATGVGLEAGGEAAALYWVSDEPLLRYLGVTASEKKFEPTLYTRERMVASVELLKHEEGVEHRNRLGILLGNRMTEANTLTLTHTLWSLLNLLPAGQKQRPHRHNSVALDLCVSAAPQGTYTLMGPELDADGWVKDPIRLEWASGACFVTPPGWWHSHHNDTDQDAWVLPLQDAGLHTHMRTLKIEFSTAE 326
I+EY +AA+P ++PIP L S HEEG TR+IPFD+ + LD+ TSPNL+A+++R+ GES+ET+A ATSQAFYVIRG G S+S EHG + W GDLFV+P + A++H T V E GG AALYW+ DEPL+ YLGV + KKFEPT ++RE+M+A V+ + H++ RNRLG+LLGN+ + T TLTH LWSLLN +PA QRPHRHNSVALDL V+A+P YTLMG E+DA+G + DPIR +W G F+TPPGWWHSHHN++D+ AWVLP+QDAGL+TH RTL I F E
Sbjct: 47 IFEYGAAANPDMAPIPVLVHPPSLHEEGETRIIPFDINDCLDIETACTSPNLMASFVRVRVGESIETKANATSQAFYVIRGTG-STSSEHGTVSWGDGDLFVVPVTEGALKH--TCVEAEKGG--AALYWIHDEPLMDYLGVKPNGKKFEPTFFSREKMLAQVQEISHQQTEGERNRLGVLLGNKACD-QTKTLTHVLWSLLNSIPAKTVQRPHRHNSVALDLAVAASPN-VYTLMGKEIDANGDIIDPIRCDWTPGGVFITPPGWWHSHHNESDEVAWVLPMQDAGLYTHQRTLDIRFVDDE 342
BLAST of EWM24986.1 vs. NCBI_GenBank
Match: gi|1199288901|gb|OUS44037.1| (RmlC-like cupin domain-containing protein [Ostreococcus tauri]) HSP 1 Score: 368.237 bits (944), Expect = 1.351e-121 Identity = 184/304 (60.53%), Postives = 222/304 (73.03%), Query Frame = 0
Query: 24 IYEYTSAADPSVSPIPYLALGSSHHEEGPTRVIPFDLGEKLDVPYQATSPNLLAAYIRILPGESLETQARATSQAFYVIRGRGVSSSQEHGEIRWKAGDLFVLPASAAAVRHAATGVGLEAGGEAAALYWVSDEPLLRYLGVT-ASEKKFEPTLYTRERMVASVELLKHEEGVEHRNRLGILLGNRMTEANTLTLTHTLWSLLNLLPAGQKQRPHRHNSVALDLCVSAAPQGTYTLMGPELDADGWVKDPIRLEWASGACFVTPPGWWHSHHNDTDQDAWVLPLQDAGLHTHMRTLKIEFSTAE 326
I+EY SAA+P + PIP L + HE G TRVIPFD+ + LD+ TSPNL+A+++RI+ GES+ET A+ATSQAFYVIRG G S S EHG+I W GD+FVLP + V HA + EA G AALYWV DEPL+RYLGV+ A EKKFEPTLY RE+M+ VE +KH+ G + NR G+LLGN + T TLTH LWSLLN +PA QRPHRHNSVALDL V+A P G YTLMG E+D+ G++ DPIR +W G FVTPPGWWHSHHN++D AWVLP+QDAGL+TH RTL I F E
Sbjct: 113 IFEYGSAANPDMRPIPVLVHPADLHECGETRVIPFDINDFLDITESCTSPNLMASFVRIVKGESIETSAKATSQAFYVIRGSGESES-EHGKISWSTGDMFVLPVTKGGVTHAC--IDAEAKG-GAALYWVHDEPLMRYLGVSPADEKKFEPTLYRREQMLERVEEIKHDSGASN-NRCGVLLGNSAC-SQTKTLTHVLWSLLNSIPAKTVQRPHRHNSVALDLAVAAKP-GVYTLMGKEIDSQGFIIDPIRCDWIEGGVFVTPPGWWHSHHNESDDVAWVLPMQDAGLYTHQRTLDIRFVDDE 409
BLAST of EWM24986.1 vs. NCBI_GenBank
Match: gi|308802073|ref|XP_003078350.1| (unnamed protein product [Ostreococcus tauri]) HSP 1 Score: 367.851 bits (943), Expect = 2.086e-121 Identity = 183/304 (60.20%), Postives = 222/304 (73.03%), Query Frame = 0
Query: 24 IYEYTSAADPSVSPIPYLALGSSHHEEGPTRVIPFDLGEKLDVPYQATSPNLLAAYIRILPGESLETQARATSQAFYVIRGRGVSSSQEHGEIRWKAGDLFVLPASAAAVRHAATGVGLEAGGEAAALYWVSDEPLLRYLGVT-ASEKKFEPTLYTRERMVASVELLKHEEGVEHRNRLGILLGNRMTEANTLTLTHTLWSLLNLLPAGQKQRPHRHNSVALDLCVSAAPQGTYTLMGPELDADGWVKDPIRLEWASGACFVTPPGWWHSHHNDTDQDAWVLPLQDAGLHTHMRTLKIEFSTAE 326
I+EY SAA+P + PIP L + HE G TRVIPFD+ + LD+ TSPNL+A+++RI+ GES+ET A+ATSQAFYVIRG G S S EHG+I W GD+FVLP + V HA + EA G AALYWV DEPL++YLGV+ A EKKFEPTLY RE+M+ VE +KH+ G + NR G+LLGN + T TLTH LWSLLN +PA QRPHRHNSVALDL V+A P G YTLMG E+D+ G++ DPIR +W G FVTPPGWWHSHHN++D AWVLP+QDAGL+TH RTL I F E
Sbjct: 113 IFEYGSAANPDMRPIPVLVHPADLHESGETRVIPFDINDFLDITESCTSPNLMASFVRIVKGESIETSAKATSQAFYVIRGSGESES-EHGKISWSTGDMFVLPVTKGGVTHAC--IDAEAKG-GAALYWVHDEPLMQYLGVSPADEKKFEPTLYRREQMLERVEEIKHDSGASN-NRCGVLLGNSAC-SQTKTLTHVLWSLLNSIPAKTVQRPHRHNSVALDLAVAAKP-GVYTLMGKEIDSQGFIIDPIRCDWIEGGVFVTPPGWWHSHHNESDDVAWVLPMQDAGLYTHQRTLDIRFVDDE 409
BLAST of EWM24986.1 vs. NCBI_GenBank
Match: gi|145344452|ref|XP_001416746.1| (predicted protein, partial [Ostreococcus lucimarinus CCE9901] >gi|144576972|gb|ABO95039.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 350.517 bits (898), Expect = 2.210e-117 Identity = 175/300 (58.33%), Postives = 214/300 (71.33%), Query Frame = 0
Query: 24 IYEYTSAADPSVSPIPYLALGSSHHEEGPTRVIPFDLGEKLDVPYQATSPNLLAAYIRILPGESLETQARATSQAFYVIRGRGVSSSQEHGEIRWKAGDLFVLPASAAAVRHAATGVGLEAGGEAAALYWVSDEPLLRYLGVT-ASEKKFEPTLYTRERMVASVELLKHEEGVEHRNRLGILLGNRMTEANTLTLTHTLWSLLNLLPAGQKQRPHRHNSVALDLCVSAAPQGTYTLMGPELDADGWVKDPIRLEWASGACFVTPPGWWHSHHNDTDQDAWVLPLQDAGLHTHMRTLKIEF 322
I+EY SAA+P + PIP L HE G TRVIPFD+ + L++ TSPNL+A+++RI+ GE++ET A ATSQAFYVIRG G +S EHG+I W GDLFV+P + + H V E+ G AALYWV DEPL+ YLGV +SEKKFEPTLY RE M+A VE +KH NR G+LLGN + T TLTH LWSLLN +PA QRPHRHNS+ALDL V+A P G YTLMG E+D +G++ DPIR +W G F+TPPGWWHSHHN++D AWVLP+QDAGL+TH RTL I F
Sbjct: 3 IFEYGSAANPDMRPIPVLVHPPDLHERGETRVIPFDINDFLEIEESCTSPNLMASFVRIVKGEAIETSANATSQAFYVIRGNG-TSEGEHGKISWSTGDLFVVPVTRGKIHHVC--VDAESMG-GAALYWVHDEPLMSYLGVNPSSEKKFEPTLYRREEMLARVEEIKHASD-RSNNRCGVLLGNTAC-SQTKTLTHVLWSLLNSIPAQSVQRPHRHNSIALDLAVAAKP-GVYTLMGKEIDRNGFIIDPIRCDWVPGGVFITPPGWWHSHHNESDDVAWVLPMQDAGLYTHQRTLDIRF 295
BLAST of EWM24986.1 vs. NCBI_GenBank
Match: gi|168020057|ref|XP_001762560.1| (predicted protein [Physcomitrella patens] >gi|162686293|gb|EDQ72683.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 351.673 bits (901), Expect = 5.422e-117 Identity = 176/303 (58.09%), Postives = 219/303 (72.28%), Query Frame = 0
Query: 24 IYEYTSAADPSVSPIPYLALGSSHHEEGPTRVIPFDLGEKLDVP-YQATSPNLLAAYIRILPGESLETQARATSQAFYVIRGRGVSSSQEHGEIRWKAGDLFVLPASAAAV--RHAATGVGLEAGGEAAALYWVSDEPLLRYLGVTASEKKFEPTLYTRERMVASVELLKHEEGVEHRNRLGILLGNRMTEANTLTLTHTLWSLLNLLPAGQKQRPHRHNSVALDLCVSAAPQGTYTLMGPELDADGWVKDPIRLEWASGACFVTPPGWWHSHHNDTDQDAWVLPLQDAGLHTHMRTLKIEFS 323
I+EYTS+A+P + PIP L ++ H GPTRV D+ + + + Y ATSPNLLA+++RI GES+ T A ATSQAFYVI GRG S G + W GDLFV P+S + H E G A LYWVSD PLL YLGV KKF+P ++R+ ++ +VE ++HE G +HRNRLGILLGN T T TL+H LWSLLN+LPAG+ QRPHRHNSVALDL V AAP GTYTLMG ELD++GWVKDPIR++W +GA F+TPPGWWHSHHN++ ++AWVLP+QDAGL+TH RTL I F+
Sbjct: 36 IFEYTSSANPYMIPIPIQKLDATEHMSGPTRVTALDISKAIGIEGYPATSPNLLASFVRICIGESVTTNACATSQAFYVIHGRG-RSQNGLGVVEWSTGDLFVFPSSTEEMPCTHFCLDDEEEQSG-GAGLYWVSDAPLLNYLGVVPRVKKFKPAYFSRQVLLDNVENVRHEPGAKHRNRLGILLGNEST-PETKTLSHVLWSLLNVLPAGEVQRPHRHNSVALDLAVRAAP-GTYTLMGKELDSEGWVKDPIRVDWTTGAVFITPPGWWHSHHNESCEEAWVLPIQDAGLYTHQRTLDIRFA 334
BLAST of EWM24986.1 vs. NCBI_GenBank
Match: gi|612392730|ref|XP_007511885.1| (predicted protein [Bathycoccus prasinos] >gi|424513351|emb|CCO65973.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 355.14 bits (910), Expect = 5.465e-117 Identity = 180/309 (58.25%), Postives = 216/309 (69.90%), Query Frame = 0
Query: 20 KDGIIYEYTSAADPSVSPIPYLALGSSHHEEGPTRVIPFDLGEKLDVPYQATSPNLLAAYIRILPGESLETQARATSQAFYVIRGRGVSSSQEHGEIRWKAGDLFVLPASAAAVRHAATGVGLEAGGEAAALYWVSDEPLLRYLGVTASEK--KFEPTLYTRERMVASVELLKHEEGVEHRNRLGILLGNRMTEANTLTLTHTLWSLLNLLPAGQKQRPHRHNSVALDLCVSAAPQGTYTLMGPELDADGWVKDPIRLEWASGACFVTPPGWWHSHHNDTDQDAWVLPLQDAGLHTHMRTLKIEFSTAE 326
KD IYEY SAA+P + PIP L HE G TR+IPFD+ + L++ Q TSPNL+A++IRI GE+LET A ATSQAFYVIRG G ++S EHG I W GDLFV+P + H V E GG AALYWV DEPL+ YLGVT +++ KF+PTLY R+ M+A VE + H + NRLG+LLGN E T TLTH LWSLLN +PA QRPHRHNSVALDL V+A P G YTLMG E+D G + DPIR +W G F+TPPGWWHSHHN++D+ AWVLP+QDAGL+TH RTL I F E
Sbjct: 88 KDARIYEYGSAANPDMKPIPVLVHPPDWHERGETRIIPFDIDDFLEIDKQCTSPNLMASFIRICEGENLETTANATSQAFYVIRGSGCTTS-EHGTINWDTGDLFVVPVCEQEMLHEC--VKAEKGG--AALYWVHDEPLMDYLGVTPNKRANKFKPTLYKRDDMLAQVEEISHST-TKSNNRLGVLLGNAKCE-QTKTLTHVLWSLLNSIPARNVQRPHRHNSVALDLAVAAKP-GVYTLMGKEIDDKGDIIDPIRCDWIPGGVFITPPGWWHSHHNESDEVAWVLPMQDAGLYTHQRTLDIRFVDDE 388
BLAST of EWM24986.1 vs. NCBI_GenBank
Match: gi|303272027|ref|XP_003055375.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226463349|gb|EEH60627.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 345.895 bits (886), Expect = 9.237e-114 Identity = 184/333 (55.26%), Postives = 221/333 (66.37%), Query Frame = 0
Query: 13 ASQPALEKDGI--------IYEYTSAADPSVSPIPYLALGSSHHEEGPTRVIPFDLGEKLDVPYQATSPNLLAAYIRILPGESLETQARATSQAFYVIRGRGVSSSQEHGEIRWKAGDLFVLPASAAAVRHAATGVGLEAGGEAAALYWVSDEPLLRYLGVTASEKKFEPTLYTRERMVASVELLKHEEGVEHRNRLGILLGNRMTEANTLTLTHTLWSLLNLLPAGQKQRPHRHNSVALDLCVSAAPQGTYTLMGPELDADGWVKDPIRLEWASGACFVTPPGWWHSHHNDTDQDAWVLPLQDAGLHTHM-----------RTLKIEFSTAE 326
A PA E+D ++EY +AA+P ++PIP L +S HE G TRVIPFD+ + L++ TSPNL+A++ R+ GESL+T A ATSQAFYVIRG GVS S EHG + W GDLFV+P + V H T V GG AALYWV DEPL+ YLGV KKFEPT++ RERM+A VE ++H RNRLG+LLGN+ E T TLTH LWSLLN +PA QRPHRHNSVALDL VSA+ YTLMG E+DA G + DPIR +W G FVTPPGWWHSHHN++D AWVLP+QDAGL+TH RTL I F E
Sbjct: 20 AKTPASEEDDTTEWTKTANVFEYGAAANPVMAPIPVLVHPASLHETGDTRVIPFDINDCLEIETHCTSPNLMASFARVRVGESLDTSAVATSQAFYVIRGAGVSKS-EHGVVSWGEGDLFVVPNTEGVVTH--TCVESTMGG--AALYWVHDEPLMDYLGVKPHGKKFEPTMFKRERMLAEVEEIRHAATEGERNRLGVLLGNKACE-QTKTLTHVLWSLLNSIPARTVQRPHRHNSVALDLAVSASAN-VYTLMGKEIDATGAIIDPIRCDWTPGGVFVTPPGWWHSHHNESDDVAWVLPMQDAGLYTHQARSIHWFPYDRRTLDIRFVDDE 345
BLAST of EWM24986.1 vs. NCBI_GenBank
Match: gi|971511956|dbj|GAQ86237.1| (hypothetical protein KFL_002780010 [Klebsormidium nitens]) HSP 1 Score: 341.273 bits (874), Expect = 1.950e-112 Identity = 174/304 (57.24%), Postives = 226/304 (74.34%), Query Frame = 0
Query: 24 IYEYTSAADPSVSPIPYLALGSSHHEEGPTRVIPFDLGEKLDVP-YQATSPNLLAAYIRILPGESLETQARATSQAFYVIRGRGVSSSQEHGEIRWKAGDLFVLPASAAAVRHAATGVGLEAGGEAAALYWVSDEPLLRYLGVTASEKKFEPTLYTRERMVASVELLKHEEGVEHRNRLGILLGNRMTEANTLTLTHTLWSLLNLLPAGQKQRPHRHNSVALDLCVSAAPQGTYTLMGPELDADGWVKDPIRLEWASGACFVTPPGWWHSHHNDTDQDAWVLPLQDAGLHTHMRTLKIEFSTAE 326
I+EY SAA+P + P+P + L + H GP+RV+ DL ++L + Y ATSPNLLA+++R+ GE+LET + +TSQAFYVI G+G SS+ G++ W AGDLFV+PA + + T + E+GG A LYWV+D PLL YLGV +FEP +++E+++++VE ++HE G HRNRLGILLGN T A+T TLTHTLWSLLN+LPAG QRPHRHNSVALDL V AAP G YTLMGPELD G + +P+R EW +G+ FVTPPGWWHSHHN++ ++AWVLP+QDAGL+TH RTL I F E
Sbjct: 80 IFEYASAANPVLKPVPVMGLQAKEHTSGPSRVVTLDLSKQLGIEEYAATSPNLLASFVRVCTGETLETTSSSTSQAFYVIHGKGYSSTPA-GKVSWSAGDLFVIPAGGRG-QCSHTCIEDESGG--AGLYWVNDAPLLSYLGVEPRVARFEPAYFSKEKLLSAVERVRHEPGAAHRNRLGILLGNAKT-ADTKTLTHTLWSLLNVLPAGDWQRPHRHNSVALDLAVHAAP-GAYTLMGPELDETGKIVNPVRCEWVTGSMFVTPPGWWHSHHNESPEEAWVLPMQDAGLYTHQRTLDIRFVEDE 377 The following BLAST results are available for this feature:
BLAST of EWM24986.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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