EWM25015.1, cds5676 (CDS) Nannochloropsis gaditana

Overview
NameEWM25015.1
Unique Namecds5676
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:599689..599912 -
Alignment locationCM002466.1:598459..599509 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25015.1
Productdihydrouridine synthase
Orig transcript idgnl|cribi|Naga_100068g29.2439.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:599689..599912 -
CM002466.1supercontigCM002466.1:598459..599509 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0055114oxidation-reduction process
GO:0008033tRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
GO:0017150tRNA dihydrouridine synthase activity
GO:0050660flavin adenine dinucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR018517tRNA_hU_synthase_CS
IPR013785Aldolase_TIM
IPR001269tRNA_hU_synthase
Homology
BLAST of EWM25015.1 vs. NCBI_GenBank
Match: gi|585106650|gb|EWM25015.1| (dihydrouridine synthase [Nannochloropsis gaditana])

HSP 1 Score: 870.152 bits (2247), Expect = 0.000e+0
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0
Query:    1 MAGVTAACPLQAARISSRGLAHEQALLLQQQPSLPLDLEAHVARAWRWYRSMGSPRYVCAPMVDQSELAFRLLCRRYGTQLAFSPMVHAACYLREKRSKRNEVFFCNTNPQDWPLIVQLCGNDPGVLLAAAKEICRIEGVCAVDLNLGCPQGIARKGKYGAFLLHQADLVVRIVSTLSRELDKPVTCKIRLLPTFSETLALCQALVGAGCSLLTVHGRTKEQNKHLVGSCDWEAIRKIKAAVPVPVFANGGIADLDDVEKCLSFTKVDGVMSSEALLENPGLFSRNVNVVTGHRANQLDLAEEYLELAAQHPPDRLKCVRAHVFKLVFTGVQLFEDLRDALVAAENVKEMRWVVGEIRRRALERAQGRDVGSAGERSWYWRHWHKGVTDKGSELPRQGKEGGKRRGEEGGVESEGMGCLFGAED 424
            MAGVTAACPLQAARISSRGLAHEQALLLQQQPSLPLDLEAHVARAWRWYRSMGSPRYVCAPMVDQSELAFRLLCRRYGTQLAFSPMVHAACYLREKRSKRNEVFFCNTNPQDWPLIVQLCGNDPGVLLAAAKEICRIEGVCAVDLNLGCPQGIARKGKYGAFLLHQADLVVRIVSTLSRELDKPVTCKIRLLPTFSETLALCQALVGAGCSLLTVHGRTKEQNKHLVGSCDWEAIRKIKAAVPVPVFANGGIADLDDVEKCLSFTKVDGVMSSEALLENPGLFSRNVNVVTGHRANQLDLAEEYLELAAQHPPDRLKCVRAHVFKLVFTGVQLFEDLRDALVAAENVKEMRWVVGEIRRRALERAQGRDVGSAGERSWYWRHWHKGVTDKGSELPRQGKEGGKRRGEEGGVESEGMGCLFGAED
Sbjct:    1 MAGVTAACPLQAARISSRGLAHEQALLLQQQPSLPLDLEAHVARAWRWYRSMGSPRYVCAPMVDQSELAFRLLCRRYGTQLAFSPMVHAACYLREKRSKRNEVFFCNTNPQDWPLIVQLCGNDPGVLLAAAKEICRIEGVCAVDLNLGCPQGIARKGKYGAFLLHQADLVVRIVSTLSRELDKPVTCKIRLLPTFSETLALCQALVGAGCSLLTVHGRTKEQNKHLVGSCDWEAIRKIKAAVPVPVFANGGIADLDDVEKCLSFTKVDGVMSSEALLENPGLFSRNVNVVTGHRANQLDLAEEYLELAAQHPPDRLKCVRAHVFKLVFTGVQLFEDLRDALVAAENVKEMRWVVGEIRRRALERAQGRDVGSAGERSWYWRHWHKGVTDKGSELPRQGKEGGKRRGEEGGVESEGMGCLFGAED 424          
BLAST of EWM25015.1 vs. NCBI_GenBank
Match: gi|1173945991|gb|OQR94563.1| (tRNA-dihydrouridine synthase [Thraustotheca clavata])

HSP 1 Score: 345.125 bits (884), Expect = 4.918e-113
Identity = 175/349 (50.14%), Postives = 236/349 (67.62%), Query Frame = 0
Query:   39 EAHVARAWRWYRSMGSPRYVCAPMVDQSELAFRLLCRRYGTQLAFSPMVHAACYLREKRSKRNEVFFCNTNPQDWPLIVQLCGNDPGVLLAAAKEICRIEGVCAVDLNLGCPQGIARKGKYGAFLLHQADLVVRIVSTLSRELDKPVTCKIRLLPTFSETLALCQALVGAGCSLLTVHGRTKEQNKHLVGSCDWEAIRKIKAAVPVPVFANGGIADLDDVEKCLSFTKVDGVMSSEALLENPGLFSRNVNVVTGHRANQLDLAEEYLELAAQHPPDRLKCVRAHVFKLVFTGVQLFEDLRDALVAAENVKEMRWVVGEIRRRALERAQGRDVGSAGERSWYWRHWHKGV 387
            E    R W+ Y  +G P+ + APMVDQSELA+R+L R+YG  L ++PM+HA  + R+  S R   +      +D PL VQ CGNDP  +LA+AK +   +   AVDLNLGCPQGIARKG+YGAFL+H+ D+V  IVSTLS  L  PV+CKIRLLP + +TLA C  LV AGC  L +HGRTKE NK LV  CDWE+IR+++  +P+PVFANGGI ++DDV+ CL  T+ +GVMSSE +LE P LF+ N + VT     Q+D+A EYL+ AA++PP   K +RAH+FKL+F  ++ F DLR+A+  A++ KE+  +  E +RR LE      +  + E SWY RH  + +
Sbjct:    5 ERAAMRGWKLYNELGKPKTILAPMVDQSELAYRMLVRKYGVDLCYTPMIHARMF-RDDSSYRASAW--QVVKEDRPLFVQFCGNDPQTVLASAKLV--QDNCDAVDLNLGCPQGIARKGRYGAFLMHEPDVVREIVSTLSTNLKVPVSCKIRLLPKYEDTLAFCNMLVDAGCCWLVIHGRTKEMNKQLVRECDWESIRRLRKELPIPVFANGGIENVDDVKACLEATEAEGVMSSEGILEWPALFTGNKDPVTQKPLRQVDVALEYLDWAAKYPPPE-KFIRAHLFKLLFQELKAFTDLREAIGVAQSHKELLDITLEAKRR-LESPDYPTIPYSIEDSWYRRHRKQAI 346          
BLAST of EWM25015.1 vs. NCBI_GenBank
Match: gi|813125945|ref|XP_012196871.1| (hypothetical protein SPRG_02894 [Saprolegnia parasitica CBS 223.65] >gi|641538586|gb|KDO32417.1| hypothetical protein SPRG_02894 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 344.739 bits (883), Expect = 1.496e-112
Identity = 179/383 (46.74%), Postives = 248/383 (64.75%), Query Frame = 0
Query:   39 EAHVARAWRWYRSMGSPRYVCAPMVDQSELAFRLLCRRYGTQLAFSPMVHAACYLREKRSKRNEVFFCNTNPQDWPLIVQLCGNDPGVLLAAAKEICRIEGVCAVDLNLGCPQGIARKGKYGAFLLHQADLVVRIVSTLSRELDKPVTCKIRLLPTFSETLALCQALVGAGCSLLTVHGRTKEQNKHLVGSCDWEAIRKIKAAVPVPVFANGGIADLDDVEKCLSFTKVDGVMSSEALLENPGLFSRNVNVVTGHRANQLDLAEEYLELAAQHPPDRLKCVRAHVFKLVFTGVQLFEDLRDALVAAENVKEMRWVVGEIRRRALERAQGRDVGSAGERSWYWRHWHKGVTDKGSELPRQGKEGGKRRGEEGGVESEGMGCLFG 421
            E   AR W+ Y  +  P+ + APMVDQSELA+R+L R+YG  L ++PM+HA  + R+  + R+  +     P+D PL VQ CGNDP ++L AAK +   +G  AVDLNLGCPQGIARKG+YGAFL+H+ D+V  IVSTLSREL  PV+CKIRLLP + +TLA C  LV AGC  L +HGRTKE NK LV  CDW++I++++  +P+PVFANGGI + +DV  CL+ T+ +GVMSSE +LE P LF+ N +  TG   +Q+DLA EY+  AA+ PP   K +RAH+FK++F  +++F DLR+A+   +   E+  +V E++ R L+      +  +   SWY RH             +Q  E  K    +  ++S G G LFG
Sbjct:   33 ERAAARGWKLYNDLQQPKTILAPMVDQSELAYRMLVRKYGVDLCYTPMIHARMF-RDDTTYRSTAW--QVVPEDRPLFVQFCGNDPAIVLEAAKHV--QDGCDAVDLNLGCPQGIARKGRYGAFLMHEPDVVREIVSTLSRELTVPVSCKIRLLPDYEDTLAFCNMLVDAGCCWLVIHGRTKEMNKQLVRECDWDSIKRLRKELPIPVFANGGIENDEDVAACLAATEAEGVMSSEGILEFPALFTGNKDPTTGEIVSQIDLALEYMAWAAKFPPPE-KFLRAHLFKMLFQELKVFTDLREAIGQGQTHAELLAIVVEMKAR-LDAPDAPVIPYSTADSWYRRHR------------KQAAELDKEPEMDKCLDS-GFGLLFG 395          
BLAST of EWM25015.1 vs. NCBI_GenBank
Match: gi|669137712|ref|XP_008604424.1| (hypothetical protein SDRG_00711 [Saprolegnia diclina VS20] >gi|530743613|gb|EQC41855.1| hypothetical protein SDRG_00711 [Saprolegnia diclina VS20])

HSP 1 Score: 343.969 bits (881), Expect = 2.547e-112
Identity = 178/379 (46.97%), Postives = 245/379 (64.64%), Query Frame = 0
Query:   43 ARAWRWYRSMGSPRYVCAPMVDQSELAFRLLCRRYGTQLAFSPMVHAACYLREKRSKRNEVFFCNTNPQDWPLIVQLCGNDPGVLLAAAKEICRIEGVCAVDLNLGCPQGIARKGKYGAFLLHQADLVVRIVSTLSRELDKPVTCKIRLLPTFSETLALCQALVGAGCSLLTVHGRTKEQNKHLVGSCDWEAIRKIKAAVPVPVFANGGIADLDDVEKCLSFTKVDGVMSSEALLENPGLFSRNVNVVTGHRANQLDLAEEYLELAAQHPPDRLKCVRAHVFKLVFTGVQLFEDLRDALVAAENVKEMRWVVGEIRRRALERAQGRDVGSAGERSWYWRHWHKGVTDKGSELPRQGKEGGKRRGEEGGVESEGMGCLFG 421
            AR W+ Y  +  P+ + APMVDQSELA+R+L R+YG  + ++PM+HA  + R+  + R   +      +D PL VQ CGNDP  +L AAK +   +G  AVDLNLGCPQGIARKG+YGAFL+H+ ++V  IVSTLSREL  PV+CKIRLLP + +TLA C  LV AGC  L +HGRTKE NK LV  CDWE+I++++  +P+PVFANGGI   DDV  CL+ T+ +GVMSSE +LE P LF+ N + +TG   +Q+DLA EY++ AA+ PP   K +RAH+FK++F  +++F DLR+A+   +   E+  +V E++ R LE      +  +   SWY RH             +Q  E  K    +  ++S G G LFG
Sbjct:   35 ARGWKLYNDLQQPKTILAPMVDQSELAYRMLVRKYGVDVCYTPMIHARMF-RDDATYRATAW--QVVQEDRPLFVQFCGNDPATVLEAAKHV--QDGCDAVDLNLGCPQGIARKGRYGAFLMHEPEVVREIVSTLSRELSVPVSCKIRLLPNYDDTLAFCNMLVDAGCCWLVIHGRTKEMNKQLVRECDWESIKRLRKELPIPVFANGGIETDDDVAACLAATEAEGVMSSEGILEYPALFTGNKDPMTGENVSQIDLALEYMDWAAKFPPPE-KFLRAHLFKMLFQELKVFTDLREAIGQGQTHAELLAIVVEMKAR-LEAPDAPLIPYSTNDSWYRRH------------RKQAAELDKEPDMDKCLDS-GFGLLFG 393          
BLAST of EWM25015.1 vs. NCBI_GenBank
Match: gi|675189981|ref|XP_008903875.1| (hypothetical protein PPTG_09840 [Phytophthora parasitica INRA-310] >gi|568096003|gb|ETN10758.1| hypothetical protein PPTG_09840 [Phytophthora parasitica INRA-310])

HSP 1 Score: 342.813 bits (878), Expect = 4.937e-112
Identity = 191/403 (47.39%), Postives = 247/403 (61.29%), Query Frame = 0
Query:   27 LLQQQPSLPLDLEAHVARAWRWYRSMGSPRYVCAPMVDQSELAFRLLCRRYGTQLAFSPMVHAACYLREKRSKRNEVFFCNTNPQDWPLIVQLCGNDPGVLLAAAKEICRIEGVC-AVDLNLGCPQGIARKGKYGAFLLHQADLVVRIVSTLSRELDKPVTCKIRLLPTFSETLALCQALVGAGCSLLTVHGRTKEQNKHLVGSCDWEAIRKIKAAVPVPVFANGGIADLDDVEKCLSFTKVDGVMSSEALLENPGLFSRNVNVVTGHRANQLDLAEEYLELAAQHPPDRLKCVRAHVFKLVFTGVQLFEDLRDALVAAENVKEMRWVVGEIRRRALERAQGRDVGS-------AGERSWYWRHWHKGVTDKGSELPRQGKEGGKRRGEEGGVESEGMGCLFG 421
            + +QQP+  + L     R + +YR++GSP+++ APMVDQSELAFR+LCR+ G +  ++PM H+  +  E    R ++F    + QD PL+VQ CGNDP  +LAAAK    +EG C AVDLNLGCPQGIARKG YG+FL+H  D V  IV TLS  L+ PVT KIR+ P  +ETL     L  AGC LLTVHGRTKE NK  V   DW+ IR+IK  + +PV ANGGI   +D+ +CL  T  DGVMSSE LLENP LF+   N   G   + L+LA++YLE A  +PP   K VRAH+FK++F  +++  DLRDAL AA++  EM  +V E+  R L+ AQ  + G        A E SWY RH             RQG+E  +RR         G G LF 
Sbjct:    1 MAEQQPTTMVKL-----RGYDFYRAIGSPKHIVAPMVDQSELAFRMLCRKLGAECCYTPMFHSRLFA-ESAEYREKMF--EHHIQDRPLVVQFCGNDPKTVLAAAK---MVEGHCDAVDLNLGCPQGIARKGHYGSFLMHDKDTVKAIVETLSAGLNIPVTVKIRVFPDDNETLEFADMLQEAGCDLLTVHGRTKEMNKTAVREVDWDIIRRIKERLTIPVIANGGIETHEDIARCLEATGCDGVMSSEGLLENPALFA-ETNNTPGEDTSFLELAKQYLECATLYPPASDKIVRAHLFKILFQDLRMHSDLRDALAAAKSQDEMVEIVDELAMR-LKEAQSENAGPEAKKVTYAAETSWYRRH-------------RQGQEKLRRRDSYEKCLDTGFGSLFA 377          
BLAST of EWM25015.1 vs. NCBI_GenBank
Match: gi|570329513|gb|ETO77461.1| (hypothetical protein F444_07334 [Phytophthora parasitica P1976] >gi|570987821|gb|ETP46425.1| hypothetical protein F442_07329 [Phytophthora parasitica P10297])

HSP 1 Score: 342.813 bits (878), Expect = 5.156e-112
Identity = 191/403 (47.39%), Postives = 247/403 (61.29%), Query Frame = 0
Query:   27 LLQQQPSLPLDLEAHVARAWRWYRSMGSPRYVCAPMVDQSELAFRLLCRRYGTQLAFSPMVHAACYLREKRSKRNEVFFCNTNPQDWPLIVQLCGNDPGVLLAAAKEICRIEGVC-AVDLNLGCPQGIARKGKYGAFLLHQADLVVRIVSTLSRELDKPVTCKIRLLPTFSETLALCQALVGAGCSLLTVHGRTKEQNKHLVGSCDWEAIRKIKAAVPVPVFANGGIADLDDVEKCLSFTKVDGVMSSEALLENPGLFSRNVNVVTGHRANQLDLAEEYLELAAQHPPDRLKCVRAHVFKLVFTGVQLFEDLRDALVAAENVKEMRWVVGEIRRRALERAQGRDVGS-------AGERSWYWRHWHKGVTDKGSELPRQGKEGGKRRGEEGGVESEGMGCLFG 421
            + +QQP+  + L     R + +YR++GSP+++ APMVDQSELAFR+LCR+ G +  ++PM H+  +  E    R ++F    + QD PL+VQ CGNDP  +LAAAK    +EG C AVDLNLGCPQGIARKG YG+FL+H  D V  IV TLS  L+ PVT KIR+ P  +ETL     L  AGC LLTVHGRTKE NK  V   DW+ IR+IK  + +PV ANGGI   +D+ +CL  T  DGVMSSE LLENP LF+   N   G   + L+LA++YLE A  +PP   K VRAH+FK++F  +++  DLRDAL AA++  EM  +V E+  R L+ AQ  + G        A E SWY RH             RQG+E  +RR         G G LF 
Sbjct:    1 MAEQQPTTMVKL-----RGYDFYRAIGSPKHIVAPMVDQSELAFRMLCRKLGAECCYTPMFHSRLFA-ESAEYREKMF--EHHIQDRPLVVQFCGNDPKTVLAAAK---MVEGHCDAVDLNLGCPQGIARKGHYGSFLMHDKDTVKAIVETLSAGLNIPVTVKIRVFPDDNETLEFADMLQEAGCDLLTVHGRTKEMNKTAVREVDWDIIRRIKERLTIPVIANGGIETHEDIARCLEATGCDGVMSSEGLLENPALFA-ETNNTPGEDTSFLELAKQYLECATLYPPASDKIVRAHLFKILFQDLRVHSDLRDALAAAKSQDEMVEIVDELTMR-LKEAQSENAGPEAKKVTYAAETSWYRRH-------------RQGQEKLRRRDSYEKCLDTGFGSLFA 377          
BLAST of EWM25015.1 vs. NCBI_GenBank
Match: gi|566025843|gb|ETI48754.1| (hypothetical protein F443_07263 [Phytophthora parasitica P1569] >gi|567963145|gb|ETK88651.1| hypothetical protein L915_07133 [Phytophthora parasitica] >gi|567991843|gb|ETL42044.1| hypothetical protein L916_07083 [Phytophthora parasitica] >gi|568021093|gb|ETL95195.1| hypothetical protein L917_06972 [Phytophthora parasitica] >gi|570953266|gb|ETP18523.1| hypothetical protein F441_07272 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 342.428 bits (877), Expect = 7.380e-112
Identity = 191/403 (47.39%), Postives = 247/403 (61.29%), Query Frame = 0
Query:   27 LLQQQPSLPLDLEAHVARAWRWYRSMGSPRYVCAPMVDQSELAFRLLCRRYGTQLAFSPMVHAACYLREKRSKRNEVFFCNTNPQDWPLIVQLCGNDPGVLLAAAKEICRIEGVC-AVDLNLGCPQGIARKGKYGAFLLHQADLVVRIVSTLSRELDKPVTCKIRLLPTFSETLALCQALVGAGCSLLTVHGRTKEQNKHLVGSCDWEAIRKIKAAVPVPVFANGGIADLDDVEKCLSFTKVDGVMSSEALLENPGLFSRNVNVVTGHRANQLDLAEEYLELAAQHPPDRLKCVRAHVFKLVFTGVQLFEDLRDALVAAENVKEMRWVVGEIRRRALERAQGRDVGS-------AGERSWYWRHWHKGVTDKGSELPRQGKEGGKRRGEEGGVESEGMGCLFG 421
            + +QQP+  + L     R + +YR++GSP+++ APMVDQSELAFR+LCR+ G +  ++PM H+  +  E    R ++F    + QD PL+VQ CGNDP  +LAAAK    +EG C AVDLNLGCPQGIARKG YG+FL+H  D V  IV TLS  L+ PVT KIR+ P  +ETL     L  AGC LLTVHGRTKE NK  V   DW+ IR+IK  + +PV ANGGI   +D+ +CL  T  DGVMSSE LLENP LF+   N   G   + L+LA++YLE A  +PP   K VRAH+FK++F  +++  DLRDAL AA++  EM  +V E+  R L+ AQ  + G        A E SWY RH             RQG+E  +RR         G G LF 
Sbjct:    1 MAEQQPTTMVKL-----RGYDFYRAIGSPKHIVAPMVDQSELAFRMLCRKLGAECCYTPMFHSRLFA-ESAEYREKMF--EHHIQDRPLVVQFCGNDPKTVLAAAK---MVEGHCDAVDLNLGCPQGIARKGHYGSFLMHDKDTVKAIVETLSAGLNIPVTVKIRVFPDDNETLEFADMLQEAGCDLLTVHGRTKEMNKTAVREVDWDIIRRIKERLTIPVIANGGIETHEDIARCLEATGCDGVMSSEGLLENPALFA-ETNNTPGEDTSFLELAKQYLECATLYPPASDKIVRAHLFKILFQDLRVHSDLRDALAAAKSQDEMVEIVDELAMR-LKEAQSENAGPEAKKVTYAAETSWYRRH-------------RQGQEKLRRRDSYEKCLDTGFGSLFA 377          
BLAST of EWM25015.1 vs. NCBI_GenBank
Match: gi|1173952829|gb|OQS00413.1| (tRNA-dihydrouridine synthase [Achlya hypogyna])

HSP 1 Score: 341.658 bits (875), Expect = 2.383e-111
Identity = 170/344 (49.42%), Postives = 233/344 (67.73%), Query Frame = 0
Query:   39 EAHVARAWRWYRSMGSPRYVCAPMVDQSELAFRLLCRRYGTQLAFSPMVHAACYLREKRSKRNEVFFCNTNPQDWPLIVQLCGNDPGVLLAAAKEICRIEGVCAVDLNLGCPQGIARKGKYGAFLLHQADLVVRIVSTLSRELDKPVTCKIRLLPTFSETLALCQALVGAGCSLLTVHGRTKEQNKHLVGSCDWEAIRKIKAAVPVPVFANGGIADLDDVEKCLSFTKVDGVMSSEALLENPGLFSRNVNVVTGHRANQLDLAEEYLELAAQHPPDRLKCVRAHVFKLVFTGVQLFEDLRDALVAAENVKEMRWVVGEIRRRALERAQGRDVGSAGERSWYWRH 382
            E   AR W  YRS+G P+ + APMVDQSELA+R+L R+YG  L ++PM+HA  + R+  + R   +     P+D PL VQ CGNDP +LL +A+ +   +   AVDLNLGCPQGIARKG+YGAFL+H+ ++V  IV TLSREL  PV+CKIRL P + +TLA C  LV AGC  L +HGRTKE NK LV  CDW+ I++++  +P+PVFANGGI +  DV  CL+ T+ +GVMSSE +LE P LF+ N N  TG   +Q+DLA EY++ AA+ PP   K +RAH+FK++F  +++F DLR+A+   +   E+  +V E++ R LE     ++  +   SWY RH
Sbjct:   35 ERAAARGWELYRSLGEPKTILAPMVDQSELAYRMLVRKYGVDLCYTPMIHARMF-RDDATYRATAW--QVVPEDRPLFVQFCGNDPDILLTSARYV--QDNCDAVDLNLGCPQGIARKGRYGAFLMHEPEVVREIVETLSRELTVPVSCKIRLFPNYEDTLAFCNMLVDAGCCWLVIHGRTKEMNKQLVRECDWDTIKRLRKELPIPVFANGGIENDADVVACLAATEAEGVMSSEGILECPALFTGNKNPFTGIPVSQIDLALEYMDWAAKFPPPE-KFIRAHLFKMLFQELKVFTDLREAIGQGQTHAELLAIVHEMKVR-LEAPDAPEIPYSVADSWYRRH 371          
BLAST of EWM25015.1 vs. NCBI_GenBank
Match: gi|568051514|gb|ETM48419.1| (hypothetical protein L914_07046 [Phytophthora parasitica])

HSP 1 Score: 340.502 bits (872), Expect = 3.847e-111
Identity = 190/403 (47.15%), Postives = 246/403 (61.04%), Query Frame = 0
Query:   27 LLQQQPSLPLDLEAHVARAWRWYRSMGSPRYVCAPMVDQSELAFRLLCRRYGTQLAFSPMVHAACYLREKRSKRNEVFFCNTNPQDWPLIVQLCGNDPGVLLAAAKEICRIEGVC-AVDLNLGCPQGIARKGKYGAFLLHQADLVVRIVSTLSRELDKPVTCKIRLLPTFSETLALCQALVGAGCSLLTVHGRTKEQNKHLVGSCDWEAIRKIKAAVPVPVFANGGIADLDDVEKCLSFTKVDGVMSSEALLENPGLFSRNVNVVTGHRANQLDLAEEYLELAAQHPPDRLKCVRAHVFKLVFTGVQLFEDLRDALVAAENVKEMRWVVGEIRRRALERAQGRDVGS-------AGERSWYWRHWHKGVTDKGSELPRQGKEGGKRRGEEGGVESEGMGCLFG 421
            + +QQP+  + L     R + +YR++GSP+++ APMVDQSELAFR+LCR+ G +  ++PM H+  +  E    R ++F    + QD PL+VQ CGNDP  +LAAAK    +EG C AVDLNLGCPQ IARKG YG+FL+H  D V  IV TLS  L+ PVT KIR+ P  +ETL     L  AGC LLTVHGRTKE NK  V   DW+ IR+IK  + +PV ANGGI   +D+ +CL  T  DGVMSSE LLENP LF+   N   G   + L+LA++YLE A  +PP   K VRAH+FK++F  +++  DLRDAL AA++  EM  +V E+  R L+ AQ  + G        A E SWY RH             RQG+E  +RR         G G LF 
Sbjct:    1 MAEQQPTTMVKL-----RGYDFYRAIGSPKHIVAPMVDQSELAFRMLCRKLGAECCYTPMFHSRLFA-ESAEYREKMF--EHHIQDRPLVVQFCGNDPKTVLAAAK---MVEGHCDAVDLNLGCPQSIARKGHYGSFLMHDKDTVKAIVETLSAGLNIPVTVKIRVFPDDNETLEFADMLQEAGCDLLTVHGRTKEMNKTAVREVDWDIIRRIKERLTIPVIANGGIETHEDIARCLEATGCDGVMSSEGLLENPALFA-ETNNTPGEDTSFLELAKQYLECATLYPPASDKIVRAHLFKILFQDLRVHSDLRDALAAAKSQDEMVEIVDELAMR-LKEAQSENAGPEAKKVTYAAETSWYRRH-------------RQGQEKLRRRDSYEKCLDTGFGSLFA 377          
BLAST of EWM25015.1 vs. NCBI_GenBank
Match: gi|145551887|ref|XP_001461620.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124429455|emb|CAK94247.1| unnamed protein product (macronuclear) [Paramecium tetraurelia])

HSP 1 Score: 339.347 bits (869), Expect = 5.724e-111
Identity = 175/346 (50.58%), Postives = 236/346 (68.21%), Query Frame = 0
Query:   38 LEAHVARAWRWYRSMGSPRYVCAPMVDQSELAFRLLCRRYGTQLAFSPMVHAACYLREKRSKRNEVFFCNTNPQDWPLIVQLCGNDPGVLLAAAKEICRIEGVC-AVDLNLGCPQGIARKGKYGAFLLHQADLVVRIVSTLSRELDKPVTCKIRLLPTFSETLALCQALVGAGCSLLTVHGRTKEQNKHLVGSCDWEAIRKIKAAVPVPVFANGGIADLDDVEKCLSFTKVDGVMSSEALLENPGLFSRNVNVVTGHRANQLDLAEEYLELAAQHPPDRLKCVRAHVFKLVFTGVQLFEDLRDALVAAENVKEMRWVVGEIRRRALERAQGRDVGSAGERSWYWRH 382
            ++ H+ +AW++Y+S+GSP+++CAPMVDQSELAFR+L R+YGT LA++PM+H+   + E +S ++E F   T P+D PL  QLCG+DP VL+ AA     I+  C A+D+NLGCPQGIARKG YGA+LL + + V+ IV  L + ++ PVTCKIR+      TL L + +  AGCS+LTVHGRTKEQNK  VG CDW  I +IK  + +PVFANGGI    DVE+CL  TKVD VMSSEALLENP LFS       G   +  DLA EY++ A Q+   RL  ++AH+FKL++TG+Q+F DLR  L +A+  +E   VV E++ +   RA   DV    +  WY R+
Sbjct:    1 MDDHIQQAWQFYKSLGSPKFICAPMVDQSELAFRMLTRKYGTTLAYTPMLHSRI-MTESKSYKDEFF--TTCPEDRPLFAQLCGHDPQVLIKAA---LMIQDQCDAIDINLGCPQGIARKGLYGAYLLEKREQVLTIVKELKQNINVPVTCKIRMFKDRKRTLDLTKDIQEAGCSILTVHGRTKEQNKDFVGQCDWTIIAEIKQILQIPVFANGGIYTWSDVERCLQETKVDAVMSSEALLENPALFS-------GEIKDLNDLALEYMQFAKQYNA-RLAEIKAHLFKLLYTGLQIFTDLRSKLGSAKTYEEHLEVVIELKNK---RA---DVPKEDKLGWYKRY 326          
The following BLAST results are available for this feature:
BLAST of EWM25015.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106650|gb|EWM25015.1|0.000e+0100.00dihydrouridine synthase [Nannochloropsis gaditana][more]
gi|1173945991|gb|OQR94563.1|4.918e-11350.14tRNA-dihydrouridine synthase [Thraustotheca clavat... [more]
gi|813125945|ref|XP_012196871.1|1.496e-11246.74hypothetical protein SPRG_02894 [Saprolegnia paras... [more]
gi|669137712|ref|XP_008604424.1|2.547e-11246.97hypothetical protein SDRG_00711 [Saprolegnia dicli... [more]
gi|675189981|ref|XP_008903875.1|4.937e-11247.39hypothetical protein PPTG_09840 [Phytophthora para... [more]
gi|570329513|gb|ETO77461.1|5.156e-11247.39hypothetical protein F444_07334 [Phytophthora para... [more]
gi|566025843|gb|ETI48754.1|7.380e-11247.39hypothetical protein F443_07263 [Phytophthora para... [more]
gi|1173952829|gb|OQS00413.1|2.383e-11149.42tRNA-dihydrouridine synthase [Achlya hypogyna][more]
gi|568051514|gb|ETM48419.1|3.847e-11147.15hypothetical protein L914_07046 [Phytophthora para... [more]
gi|145551887|ref|XP_001461620.1|5.724e-11150.58hypothetical protein [Paramecium tetraurelia strai... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5691rna5691Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications