EWM25036.1, cds5642 (CDS) Nannochloropsis gaditana

Overview
NameEWM25036.1
Unique Namecds5642
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:505642..505801 +
Alignment locationCM002466.1:505995..506376 +
Alignment locationCM002466.1:506613..506899 +
Alignment locationCM002466.1:507103..507884 +

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Properties
Property NameValue
Protein idEWM25036.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100049g11.2095.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:505642..505801 +
CM002466.1supercontigCM002466.1:505995..506376 +
CM002466.1supercontigCM002466.1:506613..506899 +
CM002466.1supercontigCM002466.1:507103..507884 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25036.1 vs. NCBI_GenBank
Match: gi|585106672|gb|EWM25036.1| (hypothetical protein Naga_100049g11 [Nannochloropsis gaditana])

HSP 1 Score: 1080.86 bits (2794), Expect = 0.000e+0
Identity = 536/536 (100.00%), Postives = 536/536 (100.00%), Query Frame = 0 
Query:    1 MMRRILFSVVGRSVLLLGCFQIPCTAWAYINPGGCLGSWSPSSSLSSMTGSLRAGSGRAFSAGLRMAMSNDGGLPLGEEPEGTRVEEALRVTTRQIKALQRLVDSFQDVPPADQPPVFPPAEVRLPVATRESVEGDKAQVLELNAKYYDDLNGRDVKSILSLWKEDGAVQMYANEDRVIRGLEEIDKHMDSRFKQPWATNKHKERMDVTKEDERVFLRGINALVTNKEMWVNPISKDKLIMFSTKIWQKSNGEWRLVHVHSGDGSQVEVHPNGQMKLSEGSRGMGQQQLFPSSSSGVTGGRLEAGQSQLGSVLGGLLGGGSGGLGGIVPGESGFTADGREYRTIMTPEGYRIIVGSGQAQGGLLGAGSGQGRSGQETKEALLKALIQDLSKNGKQEVIPLQLGARGGRGGGGGELFSGSLDGGRGRRGGGDGANDGLEDLGRKTVDAVRQLCHEGRLTVTQKQKLIFSVIRSTKQEEVSQVEMAYDLLVENALAGEDSALEEFADQCVLLCAAGGAASSLVYDEAGPEEGEDGIDE 536
            MMRRILFSVVGRSVLLLGCFQIPCTAWAYINPGGCLGSWSPSSSLSSMTGSLRAGSGRAFSAGLRMAMSNDGGLPLGEEPEGTRVEEALRVTTRQIKALQRLVDSFQDVPPADQPPVFPPAEVRLPVATRESVEGDKAQVLELNAKYYDDLNGRDVKSILSLWKEDGAVQMYANEDRVIRGLEEIDKHMDSRFKQPWATNKHKERMDVTKEDERVFLRGINALVTNKEMWVNPISKDKLIMFSTKIWQKSNGEWRLVHVHSGDGSQVEVHPNGQMKLSEGSRGMGQQQLFPSSSSGVTGGRLEAGQSQLGSVLGGLLGGGSGGLGGIVPGESGFTADGREYRTIMTPEGYRIIVGSGQAQGGLLGAGSGQGRSGQETKEALLKALIQDLSKNGKQEVIPLQLGARGGRGGGGGELFSGSLDGGRGRRGGGDGANDGLEDLGRKTVDAVRQLCHEGRLTVTQKQKLIFSVIRSTKQEEVSQVEMAYDLLVENALAGEDSALEEFADQCVLLCAAGGAASSLVYDEAGPEEGEDGIDE
Sbjct:    1 MMRRILFSVVGRSVLLLGCFQIPCTAWAYINPGGCLGSWSPSSSLSSMTGSLRAGSGRAFSAGLRMAMSNDGGLPLGEEPEGTRVEEALRVTTRQIKALQRLVDSFQDVPPADQPPVFPPAEVRLPVATRESVEGDKAQVLELNAKYYDDLNGRDVKSILSLWKEDGAVQMYANEDRVIRGLEEIDKHMDSRFKQPWATNKHKERMDVTKEDERVFLRGINALVTNKEMWVNPISKDKLIMFSTKIWQKSNGEWRLVHVHSGDGSQVEVHPNGQMKLSEGSRGMGQQQLFPSSSSGVTGGRLEAGQSQLGSVLGGLLGGGSGGLGGIVPGESGFTADGREYRTIMTPEGYRIIVGSGQAQGGLLGAGSGQGRSGQETKEALLKALIQDLSKNGKQEVIPLQLGARGGRGGGGGELFSGSLDGGRGRRGGGDGANDGLEDLGRKTVDAVRQLCHEGRLTVTQKQKLIFSVIRSTKQEEVSQVEMAYDLLVENALAGEDSALEEFADQCVLLCAAGGAASSLVYDEAGPEEGEDGIDE 536
[Close]
BLAST of EWM25036.1 vs. NCBI_GenBank
Match: gi|585106673|gb|EWM25037.1| (hypothetical protein Naga_100049g11 [Nannochloropsis gaditana])

HSP 1 Score: 578.941 bits (1491), Expect = 0.000e+0
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0 
Query:    1 MMRRILFSVVGRSVLLLGCFQIPCTAWAYINPGGCLGSWSPSSSLSSMTGSLRAGSGRAFSAGLRMAMSNDGGLPLGEEPEGTRVEEALRVTTRQIKALQRLVDSFQDVPPADQPPVFPPAEVRLPVATRESVEGDKAQVLELNAKYYDDLNGRDVKSILSLWKEDGAVQMYANEDRVIRGLEEIDKHMDSRFKQPWATNKHKERMDVTKEDERVFLRGINALVTNKEMWVNPISKDKLIMFSTKIWQKSNGEWRLVHVHSGDGSQVEVHPNGQMK 276
            MMRRILFSVVGRSVLLLGCFQIPCTAWAYINPGGCLGSWSPSSSLSSMTGSLRAGSGRAFSAGLRMAMSNDGGLPLGEEPEGTRVEEALRVTTRQIKALQRLVDSFQDVPPADQPPVFPPAEVRLPVATRESVEGDKAQVLELNAKYYDDLNGRDVKSILSLWKEDGAVQMYANEDRVIRGLEEIDKHMDSRFKQPWATNKHKERMDVTKEDERVFLRGINALVTNKEMWVNPISKDKLIMFSTKIWQKSNGEWRLVHVHSGDGSQVEVHPNGQMK
Sbjct:    1 MMRRILFSVVGRSVLLLGCFQIPCTAWAYINPGGCLGSWSPSSSLSSMTGSLRAGSGRAFSAGLRMAMSNDGGLPLGEEPEGTRVEEALRVTTRQIKALQRLVDSFQDVPPADQPPVFPPAEVRLPVATRESVEGDKAQVLELNAKYYDDLNGRDVKSILSLWKEDGAVQMYANEDRVIRGLEEIDKHMDSRFKQPWATNKHKERMDVTKEDERVFLRGINALVTNKEMWVNPISKDKLIMFSTKIWQKSNGEWRLVHVHSGDGSQVEVHPNGQMK 276
[Close]
BLAST of EWM25036.1 vs. NCBI_GenBank
Match: gi|553178876|ref|XP_005852615.1| (hypothetical protein NGA_0700600, partial [Nannochloropsis gaditana CCMP526] >gi|422295918|gb|EKU23217.1| hypothetical protein NGA_0700600, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 236.498 bits (602), Expect = 9.157e-73
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 
Query:  419 SLDGGRGRRGGGDGANDGLEDLGRKTVDAVRQLCHEGRLTVTQKQKLIFSVIRSTKQEEVSQVEMAYDLLVENALAGEDSALEEFADQCVLLCAAGGAASSLVYDEAGPEEGEDGIDE 536
            SLDGGRGRRGGGDGANDGLEDLGRKTVDAVRQLCHEGRLTVTQKQKLIFSVIRSTKQEEVSQVEMAYDLLVENALAGEDSALEEFADQCVLLCAAGGAASSLVYDEAGPEEGEDGIDE
Sbjct:    1 SLDGGRGRRGGGDGANDGLEDLGRKTVDAVRQLCHEGRLTVTQKQKLIFSVIRSTKQEEVSQVEMAYDLLVENALAGEDSALEEFADQCVLLCAAGGAASSLVYDEAGPEEGEDGIDE 118
The following BLAST results are available for this feature:
BLAST of EWM25036.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585106672|gb|EWM25036.1|0.000e+0100.00hypothetical protein Naga_100049g11 [Nannochlorops... [more]
gi|585106673|gb|EWM25037.1|0.000e+0100.00hypothetical protein Naga_100049g11 [Nannochlorops... [more]
gi|553178876|ref|XP_005852615.1|9.157e-73100.00hypothetical protein NGA_0700600, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5657rna5657Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications