EWM25060.1, cds5633 (CDS) Nannochloropsis gaditana

Overview
NameEWM25060.1
Unique Namecds5633
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:489517..489604 -
Alignment locationCM002466.1:486092..489301 -
Alignment locationCM002466.1:485870..486009 -
Alignment locationCM002466.1:485697..485826 -
Alignment locationCM002466.1:485158..485218 -
Alignment locationCM002466.1:484396..485036 -
Alignment locationCM002466.1:483936..484324 -
Alignment locationCM002466.1:483780..483877 -
Alignment locationCM002466.1:483574..483730 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25060.1
Productserine threonine-protein kinase dclk3
Orig transcript idgnl|cribi|Naga_100049g18.2119.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:489517..489604 -
CM002466.1supercontigCM002466.1:486092..489301 -
CM002466.1supercontigCM002466.1:485870..486009 -
CM002466.1supercontigCM002466.1:485697..485826 -
CM002466.1supercontigCM002466.1:485158..485218 -
CM002466.1supercontigCM002466.1:484396..485036 -
CM002466.1supercontigCM002466.1:483936..484324 -
CM002466.1supercontigCM002466.1:483780..483877 -
CM002466.1supercontigCM002466.1:483574..483730 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0016491oxidoreductase activity
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0008152metabolic process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR008271Ser/Thr_kinase_AS
IPR017441Protein_kinase_ATP_BS
IPR002198DH_sc/Rdtase_SDR
IPR011989ARM-like
IPR016040NAD(P)-bd_dom
IPR000719Prot_kinase_dom
IPR002290Ser/Thr_dual-sp_kinase
IPR002347Glc/ribitol_DH
Homology
BLAST of EWM25060.1 vs. NCBI_GenBank
Match: gi|585106696|gb|EWM25060.1| (serine threonine-protein kinase dclk3 [Nannochloropsis gaditana])

HSP 1 Score: 3405.92 bits (8830), Expect = 0.000e+0
Identity = 1637/1637 (100.00%), Postives = 1637/1637 (100.00%), Query Frame = 0
Query:    1 MFPGSPRLKLSLPRDFTFSPPLELKGEKAGIMQPPQQNLPTQRSHGQSSHAQSPSRLPESSSAHSVRRSTAINPTSSSTKKRGRQNPSTRRNLLPKDFLQDYALPRGGELGRGAFAVVRRCTERKTGLEWASKITDLRPIKMRGGSDMRVDRVMREVSILKSISHPNIVKLHTVYQNATTLVIVMELVRGKELFFEILERNHYSEADARPIFVQLAEALRYLHSRNIVHRDVKPENVLLAYPNFGSDPSTAADGSNAGSEGGCEGGGRKTKKSEGVIVKLLDFGLSKLIDPREGGSVANTFVGTRAYLAPEVELLAHGQGKAAGFPADCWSLGAVLHVMLVAKFPEFDVVHRMDEDGTLTPFSGVLKVEGLGLWDHLSLAAKDIIKRLMTPNAAKRLTAAQALEHPWAKGMDCLPPEFYSVAQGQPAQYQQRFPCGEKYAHHPQVLQQHHAQQPPHHHQQPQQQQQRHRQQQQRQEQEAARDRPPARHQRPPHPQQETEQQQQHHAQKHLWRQQQQQQLRIQLQQQQEQHQEMQKRLRQQEQQEEKQKQRKQELGQQRPSGDPYASASSVRTQESTSTVAHASRPGSYMEEGRVSSSNVESLESHSGTLSAGTVRPHSAGPDASPYAATRMTSPDAGGESLPPSRPLNMATDPIATAPVEVRLGLLVKVQRWIAQSLGVAFDLMLSEKGRVASDVAYCVRTGAVVCRYELHLTVKLLRKVHEVAALVLAIFPDLTLALKEGELKLAQSFFLSIRQWLSEIRKEVQDVQRSNETATLQMSRIIKKAASELVGSHKLVQYRERERRSKKCMAARGCVSGKGIGLSTQQGDVKPQDPACPEKDLEGGGKHKKLRRKDDGQLAETEATGMAEEIASKPEEIDINAINEAVDKSLESDTALVDDRILESLLPSVHCDETYAIEGEYDAKVDELAHVLNDLLPAEAVEPLRVIGETAGATRQLEDKQISQVIVCLQRLDRILERLDSFWARCEVDLDLMIRRGEHIRNLISNAHSPETVARLNARLSEYAVFWSRVSSACERYLNGVSETTVATLYAFMEKYNFEDQMDMHLPPADAEGITARRSSNTDHSTASCASFDMDQSAEVGRVYRERCAATPASLLDLLDVSYIMRARSSATLFLVSASYLSRTLQFVASTIYSTSIHSWATFKKTCTPIKLRKIFNVVILDFLGKVKQEFFATVRYIYMMQGDPIFIKMLNLMNDIMHLPIVDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSGALVTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQLFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKESKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEYGLEYLRAVQKLTSDQTDGCWDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLPTPDIEKIVSFTLLQNMAADKSNCKKEESCRSLPQIIIDRSSRISFVNHNHSKKIVRQSMKSCRKASGERRIVLFTTRRKTNYTTPVDFQGYLCIFYPASA 1637
            MFPGSPRLKLSLPRDFTFSPPLELKGEKAGIMQPPQQNLPTQRSHGQSSHAQSPSRLPESSSAHSVRRSTAINPTSSSTKKRGRQNPSTRRNLLPKDFLQDYALPRGGELGRGAFAVVRRCTERKTGLEWASKITDLRPIKMRGGSDMRVDRVMREVSILKSISHPNIVKLHTVYQNATTLVIVMELVRGKELFFEILERNHYSEADARPIFVQLAEALRYLHSRNIVHRDVKPENVLLAYPNFGSDPSTAADGSNAGSEGGCEGGGRKTKKSEGVIVKLLDFGLSKLIDPREGGSVANTFVGTRAYLAPEVELLAHGQGKAAGFPADCWSLGAVLHVMLVAKFPEFDVVHRMDEDGTLTPFSGVLKVEGLGLWDHLSLAAKDIIKRLMTPNAAKRLTAAQALEHPWAKGMDCLPPEFYSVAQGQPAQYQQRFPCGEKYAHHPQVLQQHHAQQPPHHHQQPQQQQQRHRQQQQRQEQEAARDRPPARHQRPPHPQQETEQQQQHHAQKHLWRQQQQQQLRIQLQQQQEQHQEMQKRLRQQEQQEEKQKQRKQELGQQRPSGDPYASASSVRTQESTSTVAHASRPGSYMEEGRVSSSNVESLESHSGTLSAGTVRPHSAGPDASPYAATRMTSPDAGGESLPPSRPLNMATDPIATAPVEVRLGLLVKVQRWIAQSLGVAFDLMLSEKGRVASDVAYCVRTGAVVCRYELHLTVKLLRKVHEVAALVLAIFPDLTLALKEGELKLAQSFFLSIRQWLSEIRKEVQDVQRSNETATLQMSRIIKKAASELVGSHKLVQYRERERRSKKCMAARGCVSGKGIGLSTQQGDVKPQDPACPEKDLEGGGKHKKLRRKDDGQLAETEATGMAEEIASKPEEIDINAINEAVDKSLESDTALVDDRILESLLPSVHCDETYAIEGEYDAKVDELAHVLNDLLPAEAVEPLRVIGETAGATRQLEDKQISQVIVCLQRLDRILERLDSFWARCEVDLDLMIRRGEHIRNLISNAHSPETVARLNARLSEYAVFWSRVSSACERYLNGVSETTVATLYAFMEKYNFEDQMDMHLPPADAEGITARRSSNTDHSTASCASFDMDQSAEVGRVYRERCAATPASLLDLLDVSYIMRARSSATLFLVSASYLSRTLQFVASTIYSTSIHSWATFKKTCTPIKLRKIFNVVILDFLGKVKQEFFATVRYIYMMQGDPIFIKMLNLMNDIMHLPIVDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSGALVTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQLFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKESKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEYGLEYLRAVQKLTSDQTDGCWDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLPTPDIEKIVSFTLLQNMAADKSNCKKEESCRSLPQIIIDRSSRISFVNHNHSKKIVRQSMKSCRKASGERRIVLFTTRRKTNYTTPVDFQGYLCIFYPASA
Sbjct:    1 MFPGSPRLKLSLPRDFTFSPPLELKGEKAGIMQPPQQNLPTQRSHGQSSHAQSPSRLPESSSAHSVRRSTAINPTSSSTKKRGRQNPSTRRNLLPKDFLQDYALPRGGELGRGAFAVVRRCTERKTGLEWASKITDLRPIKMRGGSDMRVDRVMREVSILKSISHPNIVKLHTVYQNATTLVIVMELVRGKELFFEILERNHYSEADARPIFVQLAEALRYLHSRNIVHRDVKPENVLLAYPNFGSDPSTAADGSNAGSEGGCEGGGRKTKKSEGVIVKLLDFGLSKLIDPREGGSVANTFVGTRAYLAPEVELLAHGQGKAAGFPADCWSLGAVLHVMLVAKFPEFDVVHRMDEDGTLTPFSGVLKVEGLGLWDHLSLAAKDIIKRLMTPNAAKRLTAAQALEHPWAKGMDCLPPEFYSVAQGQPAQYQQRFPCGEKYAHHPQVLQQHHAQQPPHHHQQPQQQQQRHRQQQQRQEQEAARDRPPARHQRPPHPQQETEQQQQHHAQKHLWRQQQQQQLRIQLQQQQEQHQEMQKRLRQQEQQEEKQKQRKQELGQQRPSGDPYASASSVRTQESTSTVAHASRPGSYMEEGRVSSSNVESLESHSGTLSAGTVRPHSAGPDASPYAATRMTSPDAGGESLPPSRPLNMATDPIATAPVEVRLGLLVKVQRWIAQSLGVAFDLMLSEKGRVASDVAYCVRTGAVVCRYELHLTVKLLRKVHEVAALVLAIFPDLTLALKEGELKLAQSFFLSIRQWLSEIRKEVQDVQRSNETATLQMSRIIKKAASELVGSHKLVQYRERERRSKKCMAARGCVSGKGIGLSTQQGDVKPQDPACPEKDLEGGGKHKKLRRKDDGQLAETEATGMAEEIASKPEEIDINAINEAVDKSLESDTALVDDRILESLLPSVHCDETYAIEGEYDAKVDELAHVLNDLLPAEAVEPLRVIGETAGATRQLEDKQISQVIVCLQRLDRILERLDSFWARCEVDLDLMIRRGEHIRNLISNAHSPETVARLNARLSEYAVFWSRVSSACERYLNGVSETTVATLYAFMEKYNFEDQMDMHLPPADAEGITARRSSNTDHSTASCASFDMDQSAEVGRVYRERCAATPASLLDLLDVSYIMRARSSATLFLVSASYLSRTLQFVASTIYSTSIHSWATFKKTCTPIKLRKIFNVVILDFLGKVKQEFFATVRYIYMMQGDPIFIKMLNLMNDIMHLPIVDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSGALVTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQLFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKESKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEYGLEYLRAVQKLTSDQTDGCWDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLPTPDIEKIVSFTLLQNMAADKSNCKKEESCRSLPQIIIDRSSRISFVNHNHSKKIVRQSMKSCRKASGERRIVLFTTRRKTNYTTPVDFQGYLCIFYPASA 1637          
BLAST of EWM25060.1 vs. NCBI_GenBank
Match: gi|585111089|gb|EWM28666.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana])

HSP 1 Score: 257.299 bits (656), Expect = 1.819e-72
Identity = 137/343 (39.94%), Postives = 212/343 (61.81%), Query Frame = 0
Query: 1208 IKMLNLMNDIMHLPIVDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSGAL--VTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQLFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKESKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEYGLEYLRAVQKLTSDQTDG-CWDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLPTPDIEKIVSF 1547
            + ++N  N++ H+P+ +D+ ++ + F     GPL  LG L+ FL    +G    +  +E  + + V+ITGCDTGFG  LA+ L KKG++VYA CLTQ +  ELK +      ++ ++++DVTK+  +  V  +I+   P+ +FA+V NAGV R GL+DW  ++ +R  MEVN F++++  KA LP LK+SKGRI+ ++S AG+  G P   AY++SKHA E F+++LR EL  WGI V T+NP FHRT I+ NAA  +K  ++    + Q EYG EYL A  + T+  T+    DP++V+   V A T+  P+ QY VG DA   L P + +    + +I ++
Sbjct:    1 MGLINWANNVAHIPVFEDMCYYNFFFWAWFWGPL--LGALV-FLHDATTGFFFSIFYVEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKEC----DALQTIILDVTKEDQVASVAARISAAHPQGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAK-GLFPFLQIFPLRVGEICAY 335          
BLAST of EWM25060.1 vs. NCBI_GenBank
Match: gi|585111118|gb|EWM28695.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana])

HSP 1 Score: 235.728 bits (600), Expect = 6.983e-65
Identity = 128/336 (38.10%), Postives = 197/336 (58.63%), Query Frame = 0
Query: 1211 LNLMNDIMHLPIVDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSGALVTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQLFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKESKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEYGLEYLRAVQKLTSDQT-DGCWDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLPTPDIEKIV 1545
            L   N++ H+ ++++  W+ Y     LLGP  A  +++       +  L   +E  + +A+ ITGCDTGFG  LA+ L +KG+RVYA CLT   V E+K + +    ++ ++++DVT +  +     ++  E+P+ L+A+V NAGV + GL+DW  L+ +R  MEVN F +++  KA LPL+K  KGRIV V+S+AG+  G P  + Y+ASKHA E F++SLR EL  WGI+V T+NP FHRT ++  A + ++  +  +D   QA+YG  Y    +      T D  +DP +VV  +  A T   PR QY VG DA + L+     P    EK++
Sbjct:    5 LEFWNNLCHIDLLEEWIWYSYFTGAWLLGPFMAFLIVVYDFCSGFAFPL-WHVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECS----TVETMMLDVTDENQVQEAAARVDAENPEGLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKLI 335          
BLAST of EWM25060.1 vs. NCBI_GenBank
Match: gi|298715487|emb|CBJ28057.1| (calcium/ calmodulin-dependent protein kinase 1 [Ectocarpus siliculosus])

HSP 1 Score: 231.491 bits (589), Expect = 4.713e-58
Identity = 138/316 (43.67%), Postives = 179/316 (56.65%), Query Frame = 0
Query:  127 GLEWASKITDLRPIKMRGGSDMRVDRVMREVSILKSISHPNIVKLHTVYQNATTLVIVMELVRGKELFFEILERNHYSEADARPIFVQLAEALRYLHSRNIVHRDVKPENVLLAYPNFGSDPSTAADGSNAGSEGGCEGGGRKTKKSEGVIVKLLDFGLSKLIDPREGGSVANTFVGTRAYLAPEVELLAHGQGKAAGFPADCWSLGAVLHVMLVAKFPEFDVVHRMDEDGTLTPFSGVLKVEGLGLWDHLSLAAKDIIKRLMTPNAAKRLTAAQALEHPWAKGMDC--LPPEFYSVAQGQP-AQYQQRFPCGEKY 439
            G  +A+KI DLRP K+R    M+  R+MREV I++ + HPNI+ L         LV+++E   G ELF  IL +  +SE++ARP+FVQ+A AL+Y+HS++IVHRDVKPENV++          TA DG    +                   KLLDFGLSK ID   GGSVA TFVGT +YLAPEVE    G+GK  G P DCWSLGA+L+VMLVA+FPEF V                +++ G   WD +S  AK++I+ LM  +A  RLT  +AL HPW   +     PP     A   P  Q+Q   P  E Y
Sbjct:   81 GRIYAAKIIDLRPFKLRERFSMQ--RLMREVDIMRRLRHPNIIHLVEALDTPEQLVLILEYAPGVELFDAILSKASFSESEARPVFVQVARALQYMHSKSIVHRDVKPENVMII-------DRTAPDGLYPEA-------------------KLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEVEERKGGKGKPYGTPVDCWSLGAMLYVMLVARFPEFQVQGARKH----------VRMHG-AAWDKVSAEAKELIRNLMAFDAGARLTVDKALRHPWLGDLAARDAPPSPLQQATAPPRNQFQGMPPLSESY 357          

HSP 2 Score: 75.0998 bits (183), Expect = 1.015e-9
Identity = 35/91 (38.46%), Postives = 56/91 (61.54%), Query Frame = 0
Query:  696 AYCVRTGAVVCRYELHLTVKLLRKVHEVAALVLAIFPDLTLALKEGELKLAQSFFLSIRQWLSEIRKEVQDVQRSNETATLQMSRIIKKAA 786
            A  +R  A +CR  L  +V LL+K+   AA V+ +FPDLTLA++EGE  LA+ FF +++ W+ E+  +V  VQ  N+   +++   +K  A
Sbjct:  563 AASLRRSAALCRESLRESVTLLKKIERTAAQVITLFPDLTLAVEEGEPDLARDFFATVKSWVREMYTDVNVVQAHNKANAVEVGDAMKTHA 653          

HSP 3 Score: 71.633 bits (174), Expect = 1.274e-8
Identity = 28/80 (35.00%), Postives = 48/80 (60.00%), Query Frame = 0
Query:  961 QISQVIVCLQRLDRILERLDSFWARCEVDLDLMIRRGEHIRNLISNAHSPETVARLNARLSEYAVFWSRVSSACERYLNG 1040
            ++ Q +  LQ +D +LE+L  FWA  EV  D+++R+G+ +   ++ A+ P  + R   RL++Y  FW  V S C +Y+ G
Sbjct:  951 EVKQALQMLQEVDSVLEQLALFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQSVCNKYVCG 1030          
BLAST of EWM25060.1 vs. NCBI_GenBank
Match: gi|1013935693|gb|KYQ89395.1| (putative protein serine/threonine kinase [Dictyostelium lacteum])

HSP 1 Score: 196.823 bits (499), Expect = 7.595e-49
Identity = 119/307 (38.76%), Postives = 164/307 (53.42%), Query Frame = 0
Query:  107 GGELGRGAFAVVRRCTERKTGLEWASKITDLRPIKMRGGSDMRVDRVMREVSILKSISHPNIVKLHTVYQNATTLVIVMELVRGKELFFEILERNHYSEADARPIFVQLAEALRYLHSRNIVHRDVKPENVLLAYPNFGSDPSTAADGSNAGSEGGCEGGGRKTKKSEGVIVKLLDFGLSKLIDPREGGSVANTFVGTRAYLAPEVELLAHGQGKAAGFPADCWSLGAVLHVMLVAKFPEFDVVHRMDEDGTLTPFSGVLKV------EGLGLWDHLSLAAKDIIKRLMTPNAAKRLTAAQALEHPW 407
            G  LG G FA V+   +RK+G ++A KI D +   M   S  R D +M EV+ILK ++H NI+ +  V++   TL +V+ELV+G EL  +IL    Y E  A+ +F Q+ E ++YLH R I HRD+KPEN+LL       DP  A D                        +KL DFGLS+ ++    GS+  T  GT  YLAPE+ +    QG   G   DCWS+GA+L++ML   +P F      DE   ++ F  + K       E    WD +S  AKD+IKRL+  N AKR + +Q LEHPW
Sbjct:  154 GETLGSGNFATVKLAVDRKSGEKYAIKIIDKKKYFMNSSS--RKDALMDEVNILKGLNHQNIIHIQEVFETDKTLYLVLELVQGGELLNDILNSMFYQELKAKLLFYQIVEGVKYLHDRGIAHRDLKPENILLKRKGEDLDPQ-AKDS-----------------------IKLSDFGLSRTVN---SGSLMTTMCGTPQYLAPEIIMGTGAQG-GYGKEVDCWSMGAILYIMLCG-YPPF------DESKDISIFEQIRKAIFDFPSED---WDVVSNEAKDLIKRLLNVNPAKRYSCSQILEHPW 420          
BLAST of EWM25060.1 vs. NCBI_GenBank
Match: gi|585108719|gb|EWM26631.1| (NAD(P)-binding domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 185.267 bits (469), Expect = 1.448e-46
Identity = 107/277 (38.63%), Postives = 154/277 (55.60%), Query Frame = 0
Query: 1210 MLNLMNDIMHLPIVDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSGALVTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQ-LFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKES-------KGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEY 1478
            +L+ +N  +    V D A++ + FV  L  P   LG ++   + L          +P G  VLITGCD+GFG  LA+AL + GW VYA C+T   V           G + +++MDVTK+ D+  V+ ++    PK+ L+A+V NAGV R G  DW  +  YR  ME+N F  +   K  LPLLK +         RI+N+TS +G+  G    SAY ASKHAAE++S SLR EL  +GI+V  VNP +HRT I+ +  + + + Y+ L    QA+Y
Sbjct:   52 LLSQLNSFLSADYVSDWAYYGFWFVFWLFMPYVVLGGIV--FMALYDAVTCKGNRKPVG-PVLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYFAKN-----GKVTALIMDVTKEEDVRAVMAKVDAAHPKEGLYALVNNAGVDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEIAHSQRDHLVRIYESLSGDLQADY 320          
BLAST of EWM25060.1 vs. NCBI_GenBank
Match: gi|585108794|gb|EWM26706.1| (retinol dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 182.57 bits (462), Expect = 1.755e-46
Identity = 117/337 (34.72%), Postives = 177/337 (52.52%), Query Frame = 0
Query: 1210 MLNLMNDIMHLPI-VDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSGALVTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQ-LFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLK------ESKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEYGLEY-LRAVQKLTSDQTDGCWDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLP 1537
            +L+ +N+ +H  I V  I ++LY     L  P+ A   ++ F +  L  A   R  +P G  VLITGC +GFG DL +AL  +GW+VYA    +A +A           ++  +++DVT +  +      +  E+P++ L+A+V NAG    G  DW  L  ++  M+VN +  I   KA LPLLK       +  RI+N+ S +G+  G P    Y+ASKHAAEA+S SLR E+  + I+V  VNPS+H TR +    E +   +       Q +YG  Y + A ++  + +    W P +V   ++ A TA   R QYIVG DA F  +P + LP
Sbjct:   28 LLSRLNNFLHSNIYVYIITYYLYWLGFWLFIPVVAFFTMLGFGLYDLFTAKGFR--KPCG-PVLITGCSSGFGLDLTMALAAQGWKVYACVRREADMAPFSNNP-----NVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFEHYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGSAAARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDYGEPYVVEAAEEAYTGRQWFTWKPENVGRVMLWAVTAERYRPQYIVGLDARFVNMPFLALP 356          
BLAST of EWM25060.1 vs. NCBI_GenBank
Match: gi|1191029012|ref|XP_020917493.1| (17-beta-hydroxysteroid dehydrogenase type 6-like [Exaiptasia pallida])

HSP 1 Score: 180.644 bits (457), Expect = 2.691e-46
Identity = 114/292 (39.04%), Postives = 161/292 (55.14%), Query Frame = 0
Query: 1253 KLLSGALVTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESP--KQLFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKESKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRIST--NAAETVKQAYDDLDAKTQAEYGLE-YLRAVQKLTSDQTDGCWDPR--HVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLP 1537
            KL+ G    R++ P  + VLITGCD GFG   AI L + G+ V A CLT  +  ELK +A+     + +  +DVTK   +  V  ++    P  K L+ VV NAGV   GLVDW  L T++   +VNL+ MI   K  LPL+K++KGRIVNVTS  G     P   AY+ SK AAEAFS +LR E+  +G++V  V P F +T + T  N +   +  ++ LD + Q EYG E Y   V+ +     D C  P    V++ +  A T+  P ++Y++G DA    + L  LP
Sbjct:   30 KLIHGG---RVQNPDDKYVLITGCDRGFGKMAAIRLDQLGFHVIATCLTDESQKELKEEASNK---LTTFKLDVTKCDQVQDVYHKVTALIPRDKGLWGVVNNAGVATVGLVDWVSLETFKRSADVNLWGMIDVTKTFLPLIKKTKGRIVNVTSXGGRAC-LPNAVAYSVSKFAAEAFSDALRREIADFGVKVSIVEPGFFQTPMVTKANLSNAWRDVWNKLDKEKQEEYGEEFYXIQVENMLVGMVDTCCSPSTYKVIDAIEHAVTSTRPNSRYVIGWDANLLWIWLSRLP 314          
BLAST of EWM25060.1 vs. NCBI_GenBank
Match: gi|1126181040|ref|XP_019622983.1| (PREDICTED: retinol dehydrogenase 16-like [Branchiostoma belcheri])

HSP 1 Score: 180.259 bits (456), Expect = 3.583e-46
Identity = 122/310 (39.35%), Postives = 171/310 (55.16%), Query Frame = 0
Query: 1237 LLGPLWALGLLISFLVKLLSGALVTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQ---ADIDRVVEQIAKESPKQLFAVVCNAGVGR--GGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKESKGRIVNVTSMAG-IFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRIST--NAAETVKQAYDDLDAKTQAEYGLEYLRAVQKLTSDQTDGCWDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLPT 1538
            ++  LW   L++++ ++        RL Q   + VLITGCDTGFG  LA  L + G RV+AGCLT+A VAEL+      +  +  + MDVTK     D  RVV+Q      K L+ +V NAG+     G ++W  L  Y+A++ VNL  MI   K  LPLLK+S+GRIVNV S AG I L       YA SK+ AEAFS SLR  +  +GI+V  + P F RT I++  N    + Q +     +T+ EYG  +L+A +           DP  V++ L  A  A  PR++Y+VG DA +  +P+  LPT
Sbjct:    9 IVAVLWVTYLVVTWWLER------GRLSQLTDKTVLITGCDTGFGNLLARRLDQLGLRVFAGCLTEAGVAELRQDC---SERLQPIQMDVTKTDSVQDAFRVVKQAV--GSKGLWGLVNNAGILGVITGTMEWATLEDYQAVLNVNLLGMIDVTKTFLPLLKKSRGRIVNVASGAGRIALPNAYGGPYAVSKYGAEAFSDSLRRAMRCFGIKVHIIEPGFFRTPINSQENLLRRLDQTWQRQSLETKTEYGEGFLQATKDAIVAADRSMQDPVAVLDALEHALCATHPRSRYVVGWDARYVFMPISWLPT 307          
BLAST of EWM25060.1 vs. NCBI_GenBank
Match: gi|1126181038|ref|XP_019622982.1| (PREDICTED: retinol dehydrogenase 16-like isoform X2 [Branchiostoma belcheri])

HSP 1 Score: 179.489 bits (454), Expect = 5.746e-46
Identity = 116/284 (40.85%), Postives = 157/284 (55.28%), Query Frame = 0
Query: 1262 RLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQ---ADIDRVVEQIAKESPKQLFAVVCNAGV--GRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKESKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRIST--NAAETVKQAYDDLDAKTQAEYGLEYLRAVQKLTSDQTDGCWDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLPT 1538
            RL Q   + VLITGCDTGFG  LA  L + G RV+AGCLT+A VAEL+      +  +  + MDVTK     D  R+VEQ      K L+ +V NAG+    GG ++W  L  Y+A++ VNL  MI   K  LPL+K+S+GRIVNV S  G  L  P  + Y  SK+  EAFS  LR  +  +GI+V  + P F RT I+   N    + Q +     +T+ EYG E+L+A +           DP  VV+ +  A  A  PR++Y+VG D  F  +P+  LPT
Sbjct:   28 RLSQLTDKTVLITGCDTGFGNLLARRLDQLGLRVFAGCLTEAGVAELR---QACSERLQPIQMDVTKTDSVQDAFRLVEQAV--GSKGLWGLVNNAGILGVMGGTMEWATLEDYQAVLSVNLLGMIDVTKTFLPLIKKSRGRIVNVASGVG-RLAMPQGAPYTVSKYGVEAFSDCLRRAMRCFGIKVHIIEPGFFRTPINNQENLLRRLDQTWQRQSPETKTEYGEEFLQAAKDGIVASERFMEDPVLVVDAMDHALCATHPRSRYVVGWDVRFMFMPISWLPT 305          
The following BLAST results are available for this feature:
BLAST of EWM25060.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106696|gb|EWM25060.1|0.000e+0100.00serine threonine-protein kinase dclk3 [Nannochloro... [more]
gi|585111089|gb|EWM28666.1|1.819e-7239.94retinol retinaldehyde reductase [Nannochloropsis g... [more]
gi|585111118|gb|EWM28695.1|6.983e-6538.10retinol retinaldehyde reductase [Nannochloropsis g... [more]
gi|298715487|emb|CBJ28057.1|4.713e-5843.67calcium/ calmodulin-dependent protein kinase 1 [Ec... [more]
gi|1013935693|gb|KYQ89395.1|7.595e-4938.76putative protein serine/threonine kinase [Dictyost... [more]
gi|585108719|gb|EWM26631.1|1.448e-4638.63NAD(P)-binding domain containing protein [Nannochl... [more]
gi|585108794|gb|EWM26706.1|1.755e-4634.72retinol dehydrogenase [Nannochloropsis gaditana][more]
gi|1191029012|ref|XP_020917493.1|2.691e-4639.0417-beta-hydroxysteroid dehydrogenase type 6-like [... [more]
gi|1126181040|ref|XP_019622983.1|3.583e-4639.35PREDICTED: retinol dehydrogenase 16-like [Branchio... [more]
gi|1126181038|ref|XP_019622982.1|5.746e-4640.85PREDICTED: retinol dehydrogenase 16-like isoform X... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5648rna5648Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications