EWM25053.1, cds5631 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|585106689|gb|EWM25053.1| (origin recognition complex subunit 3 [Nannochloropsis gaditana]) HSP 1 Score: 2097.01 bits (5432), Expect = 0.000e+0 Identity = 1020/1020 (100.00%), Postives = 1020/1020 (100.00%), Query Frame = 0 Query: 1 MVVQDDYIVVKSYRPPPQHVVSGKKRRYEAVAESAQHQARGGYGYLNEEQRECIMRCMAASRHVHREVAMSLYGPILVDVAGFLEGGRERRSVWQRVREKFIASAGGNPRTKQLACDLSSYIGQETPFQDTHPGDTSALLPCAVIYPNMHPTDRPELLSLLLQALHREHQTRRCLRGHIRSPLLGCTIRSTKHTTLSSILQVVHAKIMNAVDKLPLLARGPRKGGQRFRTSTAPQGTLGEVMSAYRTLVDGLAVLNASSLVPSTGESAASVVCPSVLLLFEDVEALSNRLLEDLLRLLAEASAFLPARLVFLVSPAFALAQNLGNGATATLEPATFILPPSHVCFEQVLERLFLDACLPVTVSGQVLRFFRVTFFDLHYSIITFLRHLDFMLRVHFSQLISLLCMMPYDLVAEKDLVHVAAPLVDAPVAALWSGEKIGSASKSEGPLGDDKSVPPEPSIASVVDGSSPAVPQSHGEEGEGEGKGGRGRSQAFFNKAHGTSVPRSGDSDGHEHCQEHAQIDLQRQVLVLTREEGGMHDSHHLMVLHHMDNLLRNRALRALLAKRLPPSASGAEEQHSEREQGEKAVEGYALSSQGRGGDRIRQFQCLRGLVHQQVAGRFELRLGCYLIHEALKICGAPPTGQKSDASAYGTDHAGNDGASRHSRHAERPAPSLPTRLMLLEVLLDYERPQRWRKLEASLWKGLASLTLEGLKNLVLAWLHLLQALLEQMPLYVRRSSRAINDWIVRVRELWMLLKALGKEIAKEGKQQQRRRKSQKLGTGSERGMGGRKVGAARDEATEENDEERRHMYRLKRHGITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACCRPGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFAYTLLGGKQERPQEEMTQETE 1020 MVVQDDYIVVKSYRPPPQHVVSGKKRRYEAVAESAQHQARGGYGYLNEEQRECIMRCMAASRHVHREVAMSLYGPILVDVAGFLEGGRERRSVWQRVREKFIASAGGNPRTKQLACDLSSYIGQETPFQDTHPGDTSALLPCAVIYPNMHPTDRPELLSLLLQALHREHQTRRCLRGHIRSPLLGCTIRSTKHTTLSSILQVVHAKIMNAVDKLPLLARGPRKGGQRFRTSTAPQGTLGEVMSAYRTLVDGLAVLNASSLVPSTGESAASVVCPSVLLLFEDVEALSNRLLEDLLRLLAEASAFLPARLVFLVSPAFALAQNLGNGATATLEPATFILPPSHVCFEQVLERLFLDACLPVTVSGQVLRFFRVTFFDLHYSIITFLRHLDFMLRVHFSQLISLLCMMPYDLVAEKDLVHVAAPLVDAPVAALWSGEKIGSASKSEGPLGDDKSVPPEPSIASVVDGSSPAVPQSHGEEGEGEGKGGRGRSQAFFNKAHGTSVPRSGDSDGHEHCQEHAQIDLQRQVLVLTREEGGMHDSHHLMVLHHMDNLLRNRALRALLAKRLPPSASGAEEQHSEREQGEKAVEGYALSSQGRGGDRIRQFQCLRGLVHQQVAGRFELRLGCYLIHEALKICGAPPTGQKSDASAYGTDHAGNDGASRHSRHAERPAPSLPTRLMLLEVLLDYERPQRWRKLEASLWKGLASLTLEGLKNLVLAWLHLLQALLEQMPLYVRRSSRAINDWIVRVRELWMLLKALGKEIAKEGKQQQRRRKSQKLGTGSERGMGGRKVGAARDEATEENDEERRHMYRLKRHGITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACCRPGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFAYTLLGGKQERPQEEMTQETE Sbjct: 1 MVVQDDYIVVKSYRPPPQHVVSGKKRRYEAVAESAQHQARGGYGYLNEEQRECIMRCMAASRHVHREVAMSLYGPILVDVAGFLEGGRERRSVWQRVREKFIASAGGNPRTKQLACDLSSYIGQETPFQDTHPGDTSALLPCAVIYPNMHPTDRPELLSLLLQALHREHQTRRCLRGHIRSPLLGCTIRSTKHTTLSSILQVVHAKIMNAVDKLPLLARGPRKGGQRFRTSTAPQGTLGEVMSAYRTLVDGLAVLNASSLVPSTGESAASVVCPSVLLLFEDVEALSNRLLEDLLRLLAEASAFLPARLVFLVSPAFALAQNLGNGATATLEPATFILPPSHVCFEQVLERLFLDACLPVTVSGQVLRFFRVTFFDLHYSIITFLRHLDFMLRVHFSQLISLLCMMPYDLVAEKDLVHVAAPLVDAPVAALWSGEKIGSASKSEGPLGDDKSVPPEPSIASVVDGSSPAVPQSHGEEGEGEGKGGRGRSQAFFNKAHGTSVPRSGDSDGHEHCQEHAQIDLQRQVLVLTREEGGMHDSHHLMVLHHMDNLLRNRALRALLAKRLPPSASGAEEQHSEREQGEKAVEGYALSSQGRGGDRIRQFQCLRGLVHQQVAGRFELRLGCYLIHEALKICGAPPTGQKSDASAYGTDHAGNDGASRHSRHAERPAPSLPTRLMLLEVLLDYERPQRWRKLEASLWKGLASLTLEGLKNLVLAWLHLLQALLEQMPLYVRRSSRAINDWIVRVRELWMLLKALGKEIAKEGKQQQRRRKSQKLGTGSERGMGGRKVGAARDEATEENDEERRHMYRLKRHGITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACCRPGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFAYTLLGGKQERPQEEMTQETE 1020
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|1032654621|gb|OAQ35888.1| (hypothetical protein K457DRAFT_13122 [Mortierella elongata AG-77]) HSP 1 Score: 85.5001 bits (210), Expect = 3.084e-13 Identity = 57/167 (34.13%), Postives = 81/167 (48.50%), Query Frame = 0 Query: 845 FWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACCRP--GQLD--------PTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNL--KPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIF 999 ++Y+ Q+AF QPRAS AL + YL C CCRP G D PT D ++Y LY GR IN+ WF +F ++ + +EE + A G G VG K ART E + L K + ARF+ V EL+ +GF + ++T +L + Sbjct: 648 YYYSQIAIQQKAFLPQPRASVQTALGQPEVYLNCDCCRPPSGSADQSLADMVLPTQHDTCILYKLY-VECGRMINMYDWFTAFGMILERGEQSTGVEEPPAKKRA--GAKGSRVGSK-ARTKENANTNKLDQKDVQARFISGVAELQFMGFIKSTTRKTDHVMRLTW 810
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|729699690|emb|CEJ03221.1| (hypothetical protein RMCBS344292_17209 [Rhizopus microsporus]) HSP 1 Score: 82.8037 bits (203), Expect = 5.932e-13 Identity = 54/189 (28.57%), Postives = 86/189 (45.50%), Query Frame = 0 Query: 815 ITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACC---RPGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFA 1000 I +D + DV+ H + + Y +YT+ + ++++F +QPRA+ AL YL C CC + L P+ PD ++Y LY GR INL WF +F+ VI E+EK + +E E ARF+ +V EL+ LGF +P ++T +L ++ Sbjct: 249 IAIDIADWINDVLGHYLEPFTKKPLY--EIAYYTNVRLLEKSFASQPRATVQTALTQPSHYLNCTCCGGSKEKHLAPSEPDACVLYKLY-LECGRMINLYDWFVAFSSVI---------EKEKRDKPLEENEAQ-----------------------ARFIKSVAELQFLGFIKPTQRKTDHVQRLTWS 402
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|729718096|emb|CEI85688.1| (hypothetical protein RMCBS344292_00145 [Rhizopus microsporus]) HSP 1 Score: 82.8037 bits (203), Expect = 6.728e-13 Identity = 54/189 (28.57%), Postives = 86/189 (45.50%), Query Frame = 0 Query: 815 ITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACC---RPGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFA 1000 I +D + DV+ H + + Y +YT+ + ++++F +QPRA+ AL YL C CC + L P+ PD ++Y LY GR INL WF +F+ VI E+EK + +E E ARF+ +V EL+ LGF +P ++T +L ++ Sbjct: 249 IAIDIADWINDVLGHYLEPFTKKPLY--EITYYTNVRLLEKSFASQPRATVQTALTQPSHYLNCTCCGDSKERHLAPSEPDACVLYKLY-LECGRMINLYDWFVAFSSVI---------EKEKRDKPLEENEAQ-----------------------ARFIKSVAELQFLGFIKPTQRKTDHVQRLTWS 402
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|1178064042|gb|ORE18500.1| (hypothetical protein BCV71DRAFT_115541 [Rhizopus microsporus]) HSP 1 Score: 82.4185 bits (202), Expect = 1.985e-12 Identity = 54/189 (28.57%), Postives = 86/189 (45.50%), Query Frame = 0 Query: 815 ITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACC---RPGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFA 1000 I +D + DV+ H + + Y +YT+ + ++++F +QPRA+ AL YL C CC + L P+ PD ++Y LY GR INL WF +F+ VI E+EK + +E E ARF+ +V EL+ LGF +P ++T +L ++ Sbjct: 387 IAIDIADWINDVLGHYLEPFTKKPLY--EITYYTNVRLLEKSFASQPRATVQTALTQPSHYLNCTCCGDSKERHLAPSEPDACVLYKLY-LECGRMINLYDWFVAFSSVI---------EKEKRDKPLEENEAQ-----------------------ARFIKSVAELQFLGFIKPTQRKTDHVQRLTWS 540
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|1178056510|gb|ORE11862.1| (hypothetical protein BCV72DRAFT_196919 [Rhizopus microsporus var. microsporus]) HSP 1 Score: 81.6481 bits (200), Expect = 2.919e-12 Identity = 53/189 (28.04%), Postives = 86/189 (45.50%), Query Frame = 0 Query: 815 ITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACC---RPGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFA 1000 I +D + D++ H + + Y +YT+ + ++++F +QPRA+ AL YL C CC + L P+ PD ++Y LY GR INL WF +F+ VI E+EK + +E E ARF+ +V EL+ LGF +P ++T +L ++ Sbjct: 422 IAIDIADWINDILGHYLEPFTKKPLY--EIAYYTNVRLLEKSFASQPRATVQTALTQPSHYLNCTCCGGSKEKHLAPSEPDACVLYKLY-LECGRMINLYDWFVAFSSVI---------EKEKRDKPLEENEAQ-----------------------ARFIKSVAELQFLGFIKPTQRKTDHVQRLTWS 575
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|727154447|emb|CEG63304.1| (hypothetical protein RMATCC62417_00469 [Rhizopus microsporus]) HSP 1 Score: 82.4185 bits (202), Expect = 3.018e-12 Identity = 54/189 (28.57%), Postives = 86/189 (45.50%), Query Frame = 0 Query: 815 ITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACC---RPGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFA 1000 I +D + DV+ H + + Y +YT+ + ++++F +QPRA+ AL YL C CC + L P+ PD ++Y LY GR INL WF +F+ VI E+EK + +E E ARF+ +V EL+ LGF +P ++T +L ++ Sbjct: 636 IAIDIADWINDVLGHYLEPFTKKPLY--EIAYYTNVRLLEKSFASQPRATVQTALTQPSHYLNCTCCGGSKEKHLAPSEPDACVLYKLY-LECGRMINLYDWFVAFSSVI---------EKEKRDKPLEENEAQ-----------------------ARFIKSVAELQFLGFIKPTQRKTDHVQRLTWS 789
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|961106266|ref|XP_014777255.1| (PREDICTED: origin recognition complex subunit 3-like isoform X2 [Octopus bimaculoides]) HSP 1 Score: 81.6481 bits (200), Expect = 3.720e-12 Identity = 52/155 (33.55%), Postives = 75/155 (48.39%), Query Frame = 0 Query: 845 FWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACCR--PGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKL 997 F+Y +Q+ F A PRA+ +AL+ SYL+C+CC PG + T PD+S+ Y L+ GR INL W SF V+ ++ EN K R + V Q ARF+ A+ EL+ LGF +P ++T A+L Sbjct: 530 FYYDSLPILQDYFTACPRAAIQKALSQPHSYLKCSCCEADPGVILSTFPDVSVAYKLH-LECGRLINLYDWLQSFITVL------------------EDSEN------KPKRKDQHKVLQ------ARFIQAISELQFLGFIKPTRQKTDHVARL 653
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|961106263|ref|XP_014777254.1| (PREDICTED: origin recognition complex subunit 3-like isoform X1 [Octopus bimaculoides] >gi|918311078|gb|KOF81613.1| hypothetical protein OCBIM_22026294mg [Octopus bimaculoides]) HSP 1 Score: 81.2629 bits (199), Expect = 5.015e-12 Identity = 52/155 (33.55%), Postives = 75/155 (48.39%), Query Frame = 0 Query: 845 FWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACCR--PGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKL 997 F+Y +Q+ F A PRA+ +AL+ SYL+C+CC PG + T PD+S+ Y L+ GR INL W SF V+ ++ EN K R + V Q ARF+ A+ EL+ LGF +P ++T A+L Sbjct: 588 FYYDSLPILQDYFTACPRAAIQKALSQPHSYLKCSCCEADPGVILSTFPDVSVAYKLH-LECGRLINLYDWLQSFITVL------------------EDSEN------KPKRKDQHKVLQ------ARFIQAISELQFLGFIKPTRQKTDHVARL 711
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|1001613993|gb|KXS17745.1| (hypothetical protein M427DRAFT_153635 [Gonapodya prolifera JEL478]) HSP 1 Score: 81.2629 bits (199), Expect = 6.044e-12 Identity = 64/195 (32.82%), Postives = 84/195 (43.08%), Query Frame = 0 Query: 846 WYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACC----RPGQ--LDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVIC--------GPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQ---------------------------NLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIF 999 ++ D I+ F Q S+ AL S +YLRC CC R G+ + PTM D S+ YGLY QG+ IN+ WF SF V+ G GE E + G GA+ G GK +A S GQ +LK + RF A EL+ LG+ RP ++T AKL F Sbjct: 720 YFDDVGVIENTFMPQLFPSSHVALAASATYLRCECCPVPQRHGEHVVSPTMHDTSIAYGLY-LEQGKLINMYDWFQSFKAVVAPEERGHADGAGELG--ERDGSGGGAETPTKGSAKGKGKATVRNGSGGQESRGAMNGSTDDGESGELAVGDLTCDADLKMVQVRFARATAELQMLGYIRPTKRKTDHVAKLKF 911 The following BLAST results are available for this feature:
BLAST of EWM25053.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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