EWM25046.1, cds5621 (CDS) Nannochloropsis gaditana

Overview
NameEWM25046.1
Unique Namecds5621
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:457323..458447 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25046.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100049g33.2105.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:457323..458447 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM25046.1 vs. NCBI_GenBank
Match: gi|585106682|gb|EWM25046.1| (hypothetical protein Naga_100049g33 [Nannochloropsis gaditana])

HSP 1 Score: 768.074 bits (1982), Expect = 0.000e+0
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0
Query:    1 MALVLAASSLHLLFIVNSAHSYQISRSPQFHQYHRKEALQQSAGIASATAAVWLGPLSVPQPAEATGLDNVEPTSSTTSPDTPAINPDTTPRSKLLARFSTSDLTSPGLSGLGGAKLLFLPQFLFGTWNATLCLKDIQLPLGERFVPPQILRSLNAVQMEKPTSFPLRFYSTLPDTGENTLRVTLGEVPKSEIVPDRVYNTRSVLDAFYGYPAVGEIDYDISKNPLRMDVAFATMGPDLQPLPSRRQQLLFNNLQSDRVRPNDLFVCSEYVRTVTLGPGRRVTVTDSETLSQYELMEDGRIEGKQRVAFYLTPNPNTVEGTLFFEANNKAVALFDYSFTMKKVGDCVMTPKAVEQCTAPEGSYVKVNEPVDDGA 374
            MALVLAASSLHLLFIVNSAHSYQISRSPQFHQYHRKEALQQSAGIASATAAVWLGPLSVPQPAEATGLDNVEPTSSTTSPDTPAINPDTTPRSKLLARFSTSDLTSPGLSGLGGAKLLFLPQFLFGTWNATLCLKDIQLPLGERFVPPQILRSLNAVQMEKPTSFPLRFYSTLPDTGENTLRVTLGEVPKSEIVPDRVYNTRSVLDAFYGYPAVGEIDYDISKNPLRMDVAFATMGPDLQPLPSRRQQLLFNNLQSDRVRPNDLFVCSEYVRTVTLGPGRRVTVTDSETLSQYELMEDGRIEGKQRVAFYLTPNPNTVEGTLFFEANNKAVALFDYSFTMKKVGDCVMTPKAVEQCTAPEGSYVKVNEPVDDGA
Sbjct:    1 MALVLAASSLHLLFIVNSAHSYQISRSPQFHQYHRKEALQQSAGIASATAAVWLGPLSVPQPAEATGLDNVEPTSSTTSPDTPAINPDTTPRSKLLARFSTSDLTSPGLSGLGGAKLLFLPQFLFGTWNATLCLKDIQLPLGERFVPPQILRSLNAVQMEKPTSFPLRFYSTLPDTGENTLRVTLGEVPKSEIVPDRVYNTRSVLDAFYGYPAVGEIDYDISKNPLRMDVAFATMGPDLQPLPSRRQQLLFNNLQSDRVRPNDLFVCSEYVRTVTLGPGRRVTVTDSETLSQYELMEDGRIEGKQRVAFYLTPNPNTVEGTLFFEANNKAVALFDYSFTMKKVGDCVMTPKAVEQCTAPEGSYVKVNEPVDDGA 374          
BLAST of EWM25046.1 vs. NCBI_GenBank
Match: gi|873230063|emb|CEM11634.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 241.891 bits (616), Expect = 1.105e-73
Identity = 123/273 (45.05%), Postives = 175/273 (64.10%), Query Frame = 0
Query:   95 LLARFSTSDLTSPGLSGLG-GAKLLFLPQFLFGTWNATLCLKDIQLPLGERFVPPQILRSLNAVQMEKPTSFPLRFYSTLPDTGENTLRVTLGEVPKSEIVPDRVYNTRSVLDAFYGYPAVGEIDYDISKNPLRMDVAFATMGPDLQPLPSRRQQLLFNNLQSDRV-----RPNDLFVCSEYVRTVTLGPGRRVTVTDSETLSQYELMEDGRIEGKQRVAFYLTPNPNTVEGTLFFEANNKAVALFDYSFTMKKVGD-CVMTPKAVEQCTAPE 360
            L  R  ++ L  P L  LG G ++L++P++LFGT+  T+       PLG+ +VP   LR     Q     ++  RFY T+PDT +N L+ TLG++PKS IVPD  +N ++  D+F GY AV  +D+DI  NP R  + FA +GPD++PLP RR+++  N +++  +       ND+FV SE+ R V+LG  R VT TD ETL++Y    DGR+ G+QR+A YLTPNPN  EG+LFF+   KAVAL+DY+F M++  D CV+TPK V QC A +
Sbjct:   83 LRDRLDSASLLVPSLFTLGPGQRMLYVPEWLFGTFTTTMRFMARDYPLGDEYVP-DYLRRAAVEQKGDIHTYMQRFYGTIPDTFDNKLKTTLGQLPKSAIVPDLAFNVKAAQDSFSGYSAVDNVDWDIRNNPGRYTINFARIGPDMRPLPPRRKEVFINGIRTSDISSAQDSSNDVFVTSEFTRVVSLGV-RLVTATDVETLTEYVHERDGRVVGRQRLAVYLTPNPNNREGSLFFQTGGKAVALYDYAFEMERTADRCVVTPKQVVQCIAED 353          
BLAST of EWM25046.1 vs. NCBI_GenBank
Match: gi|971518397|dbj|GAQ79771.1| (hypothetical protein KFL_000380040 [Klebsormidium nitens])

HSP 1 Score: 194.126 bits (492), Expect = 5.359e-56
Identity = 118/278 (42.45%), Postives = 154/278 (55.40%), Query Frame = 0
Query:   95 LLARFSTSDLTSPGLSGLGGAKLLFLPQFLFGTWNATLCLKDIQLPLGERFVPPQILRSL--------NAVQMEKPTSFPLRFYSTLPDTGENTLRVTLGEVPKSEIVPDRVYNTRSVLDAFYGYPAVGEIDYDISKNPLRMDVAFATMGPDLQPLPSRRQQLLFNNLQSDRVRPNDLFVCSEYVRTVTLGPGRRVTVTDSETLSQYELMEDGRIEGKQRVAFYLTPNPNTVEGTLFFEANNKAVALFDYSFTMKKVG---DCVMTPKAVEQCTAPEG 361
            L  R S   + +PG S L G   L+ PQ+LFGTW  T  L   + PLGERF+   + R +        +AVQ E       RFYSTLPDT  N LRVT G++P+S I+ DR +N +S+++A  GY  V E  YD   +P R  +  +  GP  QPL  RR +L  NN  S+     D FVC+E  R V LG  R+V V DSE + ++    D RI G +R A YL P     +  L+FEA N AVAL DY+  +++V    DCV+TPK V QC  P G
Sbjct:   18 LSQRLSADRVYNPG-SALLGPFQLYYPQWLFGTWTVTAKLTGFKAPLGERFISTGLAREVADPRYGVGSAVQYEA------RFYSTLPDTWANKLRVTAGQLPESAIIADRAFNAKSLMEASLGYGGVQESVYDPRGSPTRQTIVLSPSGPQGQPLGPRRLELYINNRFSESDAAGD-FVCAELFRRVKLGV-RQVDVADSEAIYRFHRESDDRITGSKRRAIYLQP-----QDELYFEAGNCAVALLDYALVLQRVDPGQDCVLTPKGVTQCVGPGG 281          
BLAST of EWM25046.1 vs. NCBI_GenBank
Match: gi|926790217|ref|XP_013903582.1| (hypothetical protein MNEG_3399 [Monoraphidium neglectum] >gi|761974472|gb|KIZ04563.1| hypothetical protein MNEG_3399 [Monoraphidium neglectum])

HSP 1 Score: 155.221 bits (391), Expect = 4.632e-41
Identity = 98/293 (33.45%), Postives = 143/293 (48.81%), Query Frame = 0
Query:   96 LARFSTS-DLTSPGLSGLGGAKLLFLPQFLFGTWNATLCLKDIQLPLGERFVPPQILRSLNAVQ----MEKPTSFPLRFYSTLPDTGENTLRVTLGEVPKSEIVPDRVYNTRSVLDAFYGYP-AVGEIDYDISKNPLRMDVAFATMGPDLQPLPSRRQQLLFNNLQSDRVRP-------------------NDLFVCSEYVRTVTLGPGRRVTVTDSETLSQYELMEDGRIEGKQRVAFYLTPNPNTVEGTLFFEANNKAVALFDYSFTMKKV------GDCVMTPKAVEQCT 357
            +AR +T+ D+T PG       +  + P++LFG W         + PLG R+V P +L++  A      +    SF  R++STLPDT  N  R  LG +P+  I+ DR +NTR+  +A+   P AV  + YD    P R+ V F  +  D+QPLP +R ++   N+Q+  V P                      FV SE  R VTLG  R+  V D E ++ + L+  GR+  +QR   YL P        L+F+A  +AVA++DY     +V        CV TPK V QC 
Sbjct:    1 MARATTAGDVTHPGPPAPWAPRQTYFPKWLFGEWEVESTFTGFRAPLGPRYVDPSLLQAAQAPADLGGIGSSYSFSQRYFSTLPDTLANQARFNLGLLPEDAIIADRAFNTRASSNAYLQDPSAVRSVAYDPRAAPDRLTVEFQRVAADMQPLPPKRVEIYIQNIQAGEVDPVITEDGVPSAASPFWPPPNAPCFVASELCRQVTLG-VRQADVQDYEVITAFALLSPGRVAARQRTLIYLEPR-----DELYFQARGRAVAVYDYKLQYTRVEAPAGANACVETPKDVVQCV 287          
BLAST of EWM25046.1 vs. NCBI_GenBank
Match: gi|1210511913|dbj|GAX29153.1| (hypothetical protein FisN_7Hh247 [Fistulifera solaris])

HSP 1 Score: 142.124 bits (357), Expect = 2.591e-35
Identity = 85/278 (30.58%), Postives = 147/278 (52.88%), Query Frame = 0
Query:   97 ARFSTSDLTSPGLSGLGGAKLLFLPQFLFGTWNATLCLKDIQLPLGERFVPPQILRSLNAVQMEKPT----SFPLRFYSTLPDTGENTLRVTLG-EVPKSEIVPDRVYNTRSVLDAFYGYPAVGEIDYDISKNPLRMDVAFATMGPDLQPLPSRRQQLLFNNLQSDRVRPNDLFVCSEYVRTVTLGPGRRVTVTDSETLSQYELMEDGRIEGKQRVAFYLTPNPNTVEGTLFFEANNKAVALFDYSFTMKKVGD-------------CVMTPKAVEQC 356
            +R    DL+      LG  +L + P FLFG+WN T  LK    P G  +VP   L   +    E+      S+ + ++ST+  T  N   V LG  +P+++I+ DR +N+ S+  A+     V ++ +D   +P ++ +  +++  D++PL  RR ++     Q++ +  +D+F  +E  R VT+  GR V V+++ET++++  ++   +    R+A YLTPNPN+ EG L+ +   KA+A FDY   M+++ +             CV TPK V QC
Sbjct:   87 SRIGQLDLSPLQQPFLGATELYYAP-FLFGSWNTTATLKRKIYPFGLNYVPSNSLIEGSPRYREETVGDRCSYEVHYFSTIAKTMANQATVNLGLGIPETKIIQDRAFNSVSLSAAYNQLSPVTDVVWDYRNDPTKVLLTLSSLSADMRPLGPRRAEIFLQARQAESL-GDDVFCSAEKSRAVTIA-GRDVVVSETETITEFRQVDRDHVSAISRIAVYLTPNPNSREGILWQQTEGKAIAFFDYELEMQRLKEDVPMANGKVERRACVRTPKDVIQC 361          
BLAST of EWM25046.1 vs. NCBI_GenBank
Match: gi|1210524624|dbj|GAX16524.1| (hypothetical protein FisN_7Lh247 [Fistulifera solaris])

HSP 1 Score: 141.354 bits (355), Expect = 4.874e-35
Identity = 84/269 (31.23%), Postives = 142/269 (52.79%), Query Frame = 0
Query:  106 SPGLSGLGGAKLLFLPQFLFGTWNATLCLKDIQLPLGERFVPPQILRSLNAVQMEKPT----SFPLRFYSTLPDTGENTLRVTLG-EVPKSEIVPDRVYNTRSVLDAFYGYPAVGEIDYDISKNPLRMDVAFATMGPDLQPLPSRRQQLLFNNLQSDRVRPNDLFVCSEYVRTVTLGPGRRVTVTDSETLSQYELMEDGRIEGKQRVAFYLTPNPNTVEGTLFFEANNKAVALFDYSFTMKKVGD-------------CVMTPKAVEQC 356
            SP    L GA  L+   FLFG+WN T  LK    P G  +VP   L   +    E+      S+ + +++T+ +T  N   V LG  +P+++I+ DR +N  S+  A+     V ++ +D   +P ++ +A +++  D++PL  RR ++     Q + +   D+F  +E  R VT+  GR V V+++ET++++  ++   +    R+A YLTPNPN+ EG L+ +   KA+A FDY   M+++ +             CV TPK V QC
Sbjct:   95 SPLQQPLLGANELYYAPFLFGSWNTTATLKRKIYPFGLDYVPSNSLIEGSPRYREETVGDRCSYEVHYFATIANTVANQATVNLGLGIPETKIIQDRAFNAMSLSTAYNQLSPVTDVVWDYRNDPTKVLLALSSLSADMRPLGPRRAEIFLQARQVESL-GGDVFCSAEKSRAVTIA-GRDVVVSETETITEFRKVDRDHVSAISRIAVYLTPNPNSREGILWQQTEGKAIAFFDYELEMQRLKEDVPMANGRAKQRACVRTPKDVIQC 361          
BLAST of EWM25046.1 vs. NCBI_GenBank
Match: gi|552818261|ref|XP_005845147.1| (hypothetical protein CHLNCDRAFT_137285 [Chlorella variabilis] >gi|307104793|gb|EFN53045.1| hypothetical protein CHLNCDRAFT_137285 [Chlorella variabilis])

HSP 1 Score: 131.724 bits (330), Expect = 1.863e-32
Identity = 82/230 (35.65%), Postives = 111/230 (48.26%), Query Frame = 0
Query:  164 SFPLRFYSTLPDTGENTLRVTLG-EVPKSEIVPDRVYNTRSVLDAFYGYPAVGEIDYDISKNPLRMDVAFATMGPDLQPLPSRRQQLLFNNLQSD-------RVRPNDLFVCSEYVRTVTLGP------------------GRRVTVTDSETLSQYELMEDGRIEGKQRVAFYLTPNPNTVEGTLFFEANNKAVALFDYSFTMKKVG----------DCVMTPKAVEQCT 357
            +F  R+YSTLPDT +N LRV LG  +P+  I+ DR +NTR   DAF G+ AV  ++YD    PLR  V  + + PD  PLP RR +L  NNL SD       +   +  F  SE  R     P                   R+V V D E +  +  +  G ++G+QR   YL P         +F A  +AVA++DY F+M++V            CV TPK V QC 
Sbjct:   30 AFRQRWYSTLPDTLDNQLRVNLGLGMPRDAIIADRAFNTRQATDAFLGWAAVEGVEYDPRDAPLRATVELSRVAPDASPLPPRRLELYINNLASDGSTEGQGQEAGDVAFYASELCRQCLYLPMPMRLPVPMPVPMQVLVGARQVEVKDYEVMHSWRQLAPGLVQGRQRSCLYLQPQERR-----YFSAAGRAVAVYDYRFSMRRVAPEADAPAGAVACVPTPKDVIQCV 254          
BLAST of EWM25046.1 vs. NCBI_GenBank
Match: gi|1072224565|gb|OEU09315.1| (hypothetical protein FRACYDRAFT_248739 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 100.523 bits (249), Expect = 6.008e-20
Identity = 66/250 (26.40%), Postives = 118/250 (47.20%), Query Frame = 0
Query:  115 AKLLFLPQFLFGTWNATLCLKDIQLPLGERFVPPQIL-----RSLNAVQMEKPTSFPLRFYSTLPDTGENTLRVTLGEVPKSEIVPDRVYNTRSVLDAFYGY-PAVGE-IDYDISKNPLRMDVAFATMGPDLQPLPSRRQQLLFNNLQSDRVRPND--------------LFVCSEYVRTVTLGPGRRVTVTDSETLSQYELMEDGRIEGKQRVAFYLTPNPNTVEGTLFFEANNKAVALFDYSFTMKKV 343
            A+ ++ P +  G W     L     P G  FVP + L     R+       + TS+ +R+ S++                 ++I+ DR +N  S+   +    P +G+ I+++  K+P  +     ++  D++P+  RR ++     +++ V   +              +F  +E  RT+T+G G  V+  D E +++Y  + +  I    RVA YLTPNPN+ EG L+ + N KAVA +DY  TM++V
Sbjct:  145 AQDIYYPSYFAGEWKVQSKLVSKIFPYGTDFVPSRSLIEGSPRNREEQVGGESTSYSVRYLSSI-------YDNNDNNNKNNKIISDRKFNMVSISRGYQQLSPVIGDSIEWNYKKDPTHLKFQTESVSADMRPIGPRRGEIYITARRTEEVPQKESDNNNDNSNNNIGGVFAAAERSRTITIGTGN-VSANDQEVVTEYRQINNNLINAVSRVAVYLTPNPNSREGVLWQQINGKAVAFYDYELTMERV 386          
BLAST of EWM25046.1 vs. NCBI_GenBank
Match: gi|926769030|ref|XP_013893168.1| (hypothetical protein MNEG_13815 [Monoraphidium neglectum] >gi|761960419|gb|KIY94148.1| hypothetical protein MNEG_13815 [Monoraphidium neglectum])

HSP 1 Score: 95.1301 bits (235), Expect = 1.278e-18
Identity = 82/280 (29.29%), Postives = 118/280 (42.14%), Query Frame = 0
Query:  102 SDLTSPGLSGLGGA-----KLLFLPQFLFGTWNATLCLKDIQLPLGERFVPPQILRSLNAVQMEKPTSFPLRFYSTLPDTG-----ENTLRVTLGEVP-KSEIVPDRVYNTRSVLDAFYGYPAVGEIDYDISKNPLRMDVAFATMGPDL--QPLPSRRQQLLFNNLQSDRVRPNDL---------FVCSEYVRTVTLGPGRRVTVTDSETLSQYELMEDG----------------RIEGKQRVAFYLTPNPNTVEGTLFFEANNKAVALFDYSFTMKKV 343
            SD ++    G+G A     K L  P +L G W      +    PLG RF+   +           P +       TLPD G     E T        P +  +V DRV+NTR V+DAF GYPAV  + YD  +NP RM V ++T   D   Q    R+ ++  NN  S     +           F C E  R VT     R     S+  S +E   +G                R+  +QRVA +L P     +  L+FEA ++AVA++DY++  ++ 
Sbjct:   26 SDASAARNPGVGWALRKRDKQLLYPPWLEGAWRVRARFEGAAFPLGNRFISKTV-----------PGALKASMAVTLPDVGAAMDRELTFDQRFAASPEQGGVVADRVFNTRQVMDAFLGYPAVTGVTYDPLENPTRMAVVWSTPRKDASQQSADLRKAEVFINNRGSSGFDGDGGGNQGGGASPFCCFELYRQVTQA---RQQGAVSDYASWWEFRLEGSAGTSEAGGGGVGGSQRVAVRQRVAAFLQP-----QDPLYFEAGDRAVAVYDYTYAYERA 286          
BLAST of EWM25046.1 vs. NCBI_GenBank
Match: gi|676381391|ref|XP_009033974.1| (hypothetical protein AURANDRAFT_61723 [Aureococcus anophagefferens] >gi|323455758|gb|EGB11626.1| hypothetical protein AURANDRAFT_61723 [Aureococcus anophagefferens])

HSP 1 Score: 87.4261 bits (215), Expect = 4.346e-15
Identity = 82/273 (30.04%), Postives = 124/273 (45.42%), Query Frame = 0
Query:   97 ARFSTSDLTSP----GLSGLGGAKLLFLPQFLFGTWNATLCLKDIQLPLGERFV--PPQIL----RSLNA--VQMEKPTSFPLRFYSTLPDTGENTLRVTLGEVPKSEIVPDRVYNTRSVLDAFYGYPAVGEIDY-DISKNPLRMDVAFATMGPDLQPLPSR-------RQQLLFNNLQSDRVRPNDLFVCSEYVRTVTLGPGRRVT---VTDSETLSQYELME-DGRIEGKQRVAFYLTPNPNTVEGTLFFEANNKAVALFDYSFTMKKVGD 345
             RF + DL  P    G + L G   L+ P ++ GTWN +  L  ++ PLG +FV  P   L    RSL+    ++ K     LRF +T                 K  +V DR++NTRS LDAF G   V  ++Y +   N  R +      G +  PL +          Q +F+  ++     + ++  SE  R++     +       TDSETL  +EL + DG + G+ R+  YL PN       L+FE+  KAV++ DY   M +V D
Sbjct:  307 GRFESLDLARPEPDRGRNELSGVANLYFPPWMRGTWNVSQTLTRVEAPLGLKFVGGPRADLAIAKRSLDEQRSRVGKAQPLQLRFVAT-----------------KFGVVEDRLFNTRSRLDAFAGRRVVASVEYAETGGNNRRGNAVLG--GSEDDPLTTTVTRYRGPAAQKIFSLARTAETGGDGVWRGSEASRSIFALTNQNAAPPITTDSETL--FELRQGDGTVTGRLRLVDYLNPND-----PLYFESRKKAVSVSDYDLAMTRVAD 553          
The following BLAST results are available for this feature:
BLAST of EWM25046.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106682|gb|EWM25046.1|0.000e+0100.00hypothetical protein Naga_100049g33 [Nannochlorops... [more]
gi|873230063|emb|CEM11634.1|1.105e-7345.05unnamed protein product [Vitrella brassicaformis C... [more]
gi|971518397|dbj|GAQ79771.1|5.359e-5642.45hypothetical protein KFL_000380040 [Klebsormidium ... [more]
gi|926790217|ref|XP_013903582.1|4.632e-4133.45hypothetical protein MNEG_3399 [Monoraphidium negl... [more]
gi|1210511913|dbj|GAX29153.1|2.591e-3530.58hypothetical protein FisN_7Hh247 [Fistulifera sola... [more]
gi|1210524624|dbj|GAX16524.1|4.874e-3531.23hypothetical protein FisN_7Lh247 [Fistulifera sola... [more]
gi|552818261|ref|XP_005845147.1|1.863e-3235.65hypothetical protein CHLNCDRAFT_137285 [Chlorella ... [more]
gi|1072224565|gb|OEU09315.1|6.008e-2026.40hypothetical protein FRACYDRAFT_248739 [Fragilario... [more]
gi|926769030|ref|XP_013893168.1|1.278e-1829.29hypothetical protein MNEG_13815 [Monoraphidium neg... [more]
gi|676381391|ref|XP_009033974.1|4.346e-1530.04hypothetical protein AURANDRAFT_61723 [Aureococcus... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5636rna5636Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications