EWM25065.1, cds5611 (CDS) Nannochloropsis gaditana

Overview
NameEWM25065.1
Unique Namecds5611
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:434807..438055 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25065.1
Productdna primase
Orig transcript idgnl|cribi|Naga_100098g22.5259.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:434807..438055 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0009058biosynthetic process
GO:0006269DNA replication, synthesis of RNA primer
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0003677DNA binding
GO:0003896DNA primase activity
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR030846DnaG_bac
IPR013264DNA_primase_core_N
IPR006295DNA_primase_DnaG
IPR006171Toprim_domain
IPR002694Znf_CHC2
Homology
BLAST of EWM25065.1 vs. NCBI_GenBank
Match: gi|585106702|gb|EWM25065.1| (dna primase [Nannochloropsis gaditana])

HSP 1 Score: 2189.08 bits (5671), Expect = 0.000e+0
Identity = 1082/1082 (100.00%), Postives = 1082/1082 (100.00%), Query Frame = 0
Query:    1 MWSPARGGTLLARLLLLVAAVEAFRIWRPRVLNRAARGDQFRRCCSSKRHYLPSTAALALRPSSSASVQGAAEGSEMKERIRASVPLSDVIKQHVDLDEKGDGQWMGCCPFHDDKSPSMSVSDDKGLYHCFSCGAGGDIFSFVSNIGGLSFPEAMELLADEAGIDLVKEGYGQGGGKGASGATKESHARLHQALEAAGEYYASMLLEASAGPARTHLQERGFSAGLASDFGLGYAPVRPGGLLRHLGPLKLSREELVKSGLFSPRSLDNPSPFDRLSGRLIIPIRNARGQMVAFGGRLLDEGPLAKYLNTPETPVFKKRNLLFGAHVARAAIREKGTALVVEGYFDVMALHGAGLRHAVACMGTAVTGDHVKTLQNALPSGGGTLVLVLDRDKAGQRAAARTCRELLLPLEAEGRLGGLHVKVAQLPEGSGDPDDLLRAYAAGWGQAQAGAMFEREVVNKAMLWKEWYARLLMEEGGEVGVGKAGASAGGPHASRGDTAAFSRRSEALTDFLARLPATQQADRTFLCSLLAREAFPSDEPLRARVTSDLLQQCDEKHSAYKARETERARQQQHEQQLKQQQQKLQQPQRLQQSKEEPAPRLQQTQPPGRQQPQYPHRPPQRLTNLPAPQPSSAPVARPQSQQSQQSWAQYTPLKQTGRTPAPERQGGEETRSWDEHRVSRPSYTSSTLQGSAFSSPPSSFGAPGLGDARSLHASSLISTAQGVSASRPRPPPQKAAPQATPLPSSPPPSSFNEEDSKAIFIYEQSLIELLIADPRARARVRDFLWSTVDGLGLHEQQPPEAQQLMLSTHSHQLLLDWLMQADARTHRSSLLSFPPLSQNPASSVARLKQQFEMDVPAFPELLSYFDRSLERERVPHSMDDLQRILRGALAFLVNVTVARRVEEETEFWQRRLLHLEAQREGSMASSKGHAMIAPPLRPEATASSQERYPYTRGVEEQRQERRYFQGAEPRAPYQREISGAMSQSSWQHRSQTLQQQAQLQQERPPSLEVRLQQKAHEQRGRWPSETGEGLNNYYNSVYAQREAQEAYLQSQRAREIRFGSSLPPIESNPPEARVGPAPGPPR 1082
            MWSPARGGTLLARLLLLVAAVEAFRIWRPRVLNRAARGDQFRRCCSSKRHYLPSTAALALRPSSSASVQGAAEGSEMKERIRASVPLSDVIKQHVDLDEKGDGQWMGCCPFHDDKSPSMSVSDDKGLYHCFSCGAGGDIFSFVSNIGGLSFPEAMELLADEAGIDLVKEGYGQGGGKGASGATKESHARLHQALEAAGEYYASMLLEASAGPARTHLQERGFSAGLASDFGLGYAPVRPGGLLRHLGPLKLSREELVKSGLFSPRSLDNPSPFDRLSGRLIIPIRNARGQMVAFGGRLLDEGPLAKYLNTPETPVFKKRNLLFGAHVARAAIREKGTALVVEGYFDVMALHGAGLRHAVACMGTAVTGDHVKTLQNALPSGGGTLVLVLDRDKAGQRAAARTCRELLLPLEAEGRLGGLHVKVAQLPEGSGDPDDLLRAYAAGWGQAQAGAMFEREVVNKAMLWKEWYARLLMEEGGEVGVGKAGASAGGPHASRGDTAAFSRRSEALTDFLARLPATQQADRTFLCSLLAREAFPSDEPLRARVTSDLLQQCDEKHSAYKARETERARQQQHEQQLKQQQQKLQQPQRLQQSKEEPAPRLQQTQPPGRQQPQYPHRPPQRLTNLPAPQPSSAPVARPQSQQSQQSWAQYTPLKQTGRTPAPERQGGEETRSWDEHRVSRPSYTSSTLQGSAFSSPPSSFGAPGLGDARSLHASSLISTAQGVSASRPRPPPQKAAPQATPLPSSPPPSSFNEEDSKAIFIYEQSLIELLIADPRARARVRDFLWSTVDGLGLHEQQPPEAQQLMLSTHSHQLLLDWLMQADARTHRSSLLSFPPLSQNPASSVARLKQQFEMDVPAFPELLSYFDRSLERERVPHSMDDLQRILRGALAFLVNVTVARRVEEETEFWQRRLLHLEAQREGSMASSKGHAMIAPPLRPEATASSQERYPYTRGVEEQRQERRYFQGAEPRAPYQREISGAMSQSSWQHRSQTLQQQAQLQQERPPSLEVRLQQKAHEQRGRWPSETGEGLNNYYNSVYAQREAQEAYLQSQRAREIRFGSSLPPIESNPPEARVGPAPGPPR
Sbjct:    1 MWSPARGGTLLARLLLLVAAVEAFRIWRPRVLNRAARGDQFRRCCSSKRHYLPSTAALALRPSSSASVQGAAEGSEMKERIRASVPLSDVIKQHVDLDEKGDGQWMGCCPFHDDKSPSMSVSDDKGLYHCFSCGAGGDIFSFVSNIGGLSFPEAMELLADEAGIDLVKEGYGQGGGKGASGATKESHARLHQALEAAGEYYASMLLEASAGPARTHLQERGFSAGLASDFGLGYAPVRPGGLLRHLGPLKLSREELVKSGLFSPRSLDNPSPFDRLSGRLIIPIRNARGQMVAFGGRLLDEGPLAKYLNTPETPVFKKRNLLFGAHVARAAIREKGTALVVEGYFDVMALHGAGLRHAVACMGTAVTGDHVKTLQNALPSGGGTLVLVLDRDKAGQRAAARTCRELLLPLEAEGRLGGLHVKVAQLPEGSGDPDDLLRAYAAGWGQAQAGAMFEREVVNKAMLWKEWYARLLMEEGGEVGVGKAGASAGGPHASRGDTAAFSRRSEALTDFLARLPATQQADRTFLCSLLAREAFPSDEPLRARVTSDLLQQCDEKHSAYKARETERARQQQHEQQLKQQQQKLQQPQRLQQSKEEPAPRLQQTQPPGRQQPQYPHRPPQRLTNLPAPQPSSAPVARPQSQQSQQSWAQYTPLKQTGRTPAPERQGGEETRSWDEHRVSRPSYTSSTLQGSAFSSPPSSFGAPGLGDARSLHASSLISTAQGVSASRPRPPPQKAAPQATPLPSSPPPSSFNEEDSKAIFIYEQSLIELLIADPRARARVRDFLWSTVDGLGLHEQQPPEAQQLMLSTHSHQLLLDWLMQADARTHRSSLLSFPPLSQNPASSVARLKQQFEMDVPAFPELLSYFDRSLERERVPHSMDDLQRILRGALAFLVNVTVARRVEEETEFWQRRLLHLEAQREGSMASSKGHAMIAPPLRPEATASSQERYPYTRGVEEQRQERRYFQGAEPRAPYQREISGAMSQSSWQHRSQTLQQQAQLQQERPPSLEVRLQQKAHEQRGRWPSETGEGLNNYYNSVYAQREAQEAYLQSQRAREIRFGSSLPPIESNPPEARVGPAPGPPR 1082          
BLAST of EWM25065.1 vs. NCBI_GenBank
Match: gi|553193098|ref|XP_005855708.1| (DNA primase [Nannochloropsis gaditana CCMP526] >gi|422293351|gb|EKU20651.1| DNA primase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 2166.73 bits (5613), Expect = 0.000e+0
Identity = 1072/1084 (98.89%), Postives = 1077/1084 (99.35%), Query Frame = 0
Query:    1 MWSPARGGTLLARLLLLVAAVEAFRIWRPRVLNRAARGDQFRRCCSSKRHYLPSTAALALRPSSSASVQGAAEGSEMKERIRASVPLSDVIKQHVDLDEKGDGQWMGCCPFHDDKSPSMSVSDDKGLYHCFSCGAGGDIFSFVSNIGGLSFPEAMELLADEAGIDLVKEGYGQGGGKGASGATKESHARLHQALEAAGEYYASMLLEASAGPARTHLQERGFSAGLASDFGLGYAPVRPGGLLRHLGPLKLSREELVKSGLFSPRSLDNPSPFDRLSGRLIIPIRNARGQMVAFGGRLLDEGPLAKYLNTPETPVFKKRNLLFGAHVARAAIREKGTALVVEGYFDVMALHGAGLRHAVACMGTAVTGDHVKTLQNALPSGGGTLVLVLDRDKAGQRAAARTCRELLLPLEAEGRLGGLHVKVAQLPEGSGDPDDLLRAYAAGWGQAQAGAMFEREVVNKAMLWKEWYARLLMEEGGEVGVGKAGASAGGPHASRGDTAAFSRRSEALTDFLARLPATQQADRTFLCSLLAREAFPSDEPLRARVTSDLLQQCDEKHSAYKARETERARQQQHEQQLKQQQQKLQQPQRLQQSKEEPAPRLQQTQPPGRQQPQYPHRPPQRLTNLPAPQPSSAPVARPQSQQSQQSWAQYTPLKQTGRTPAPERQGGEETRSWDEHRVSRPSYTSSTLQGSAFSSPPSSFGAPGLGDAR--SLHASSLISTAQGVSASRPRPPPQKAAPQATPLPSSPPPSSFNEEDSKAIFIYEQSLIELLIADPRARARVRDFLWSTVDGLGLHEQQPPEAQQLMLSTHSHQLLLDWLMQADARTHRSSLLSFPPLSQNPASSVARLKQQFEMDVPAFPELLSYFDRSLERERVPHSMDDLQRILRGALAFLVNVTVARRVEEETEFWQRRLLHLEAQREGSMASSKGHAMIAPPLRPEATASSQERYPYTRGVEEQRQERRYFQGAEPRAPYQREISGAMSQSSWQHRSQTLQQQAQLQQERPPSLEVRLQQKAHEQRGRWPSETGEGLNNYYNSVYAQREAQEAYLQSQRAREIRFGSSLPPIESNPPEARVGPAPGPPR 1082
            MWSPARGGTLLARLLLLVAAVEAFRIWRPRVLNRAARGDQFRRCCSSKRHYLPSTAALALRPSSSASVQGAAEGSEMKERIRASVPLSDVIKQHVDLDEKGDGQWMGCCPFHDDKSPSMSVSDDKGLYHCFSCGAGGDIFSFVSNIGGLSFPEAMELLADEAGIDLVKEGYGQGGGKGASGATKESHARLHQALEAAGEYYASMLLEASAGPARTHLQERGFSAGLASDFGLGYAPVRPGGLLRHLGPLKLSREELVKSGLFSPRSLDNPSPFDRLSGRLIIPIRNARGQMVAFGGRLLDEGPLAKYLNTPETPVFKKRNLLFGAHVARAAIREKGTALVVEGYFDVMALHGAGLRHAVACMGTAVTGDHVKTLQNALPSGGGTLVLVLDRDKAGQRAAARTCRELLLPLEAEGRLGGLHVKVAQLPEGSGDPDDLLRAYAAGWGQAQAGAMFEREVVNKAMLWKEWYARLLMEEGGEVGVGKAGASAGGPHASRGDTAAFSRRSEALTDFLARLPATQQADRTFLCSLLAREAFPSDEPLRARVTSDLLQQCDEKHSAYKARETERARQQQHEQQLKQQQQKLQQPQRLQQSKEEPAPRLQQTQPPGRQQPQYPHRPPQR+TNLPAPQPSSAPVARPQSQQSQQSWAQYTPLKQTGRTPAPERQG EETRSWDEHRVSRPSYTSSTLQGSAFSSPPSSFGAPGLGDAR  SLHASSLISTAQGVSASRPRPPPQKAAPQATPLPSSPPPSSFNEEDSKAIFIYEQSLIELLIADPRARARVRDFLWSTVDGLGLHEQQPPEAQQLMLSTHSHQLL DWLMQADARTHRSSLLSFPP SQ+PA SVARLKQQFEMDVPAFPEL+SYFDRSLERERVPHSMDDLQRILRGALAFLVNVTVARRVEEETEFWQRRLLHLEAQREGSMASSKGHAMIAPPLRPEATASSQERYPYTRGVEEQRQERRYFQGAEPRAPYQRE+SGAMSQSSWQHRSQTLQQQAQLQQERPPSLEVRLQQKAHEQRGRWPSETGEGLNNYYNSVYA R+AQEAYLQSQRAREIRFGSSLPPIESNPPEARVGPAPGPPR
Sbjct:    1 MWSPARGGTLLARLLLLVAAVEAFRIWRPRVLNRAARGDQFRRCCSSKRHYLPSTAALALRPSSSASVQGAAEGSEMKERIRASVPLSDVIKQHVDLDEKGDGQWMGCCPFHDDKSPSMSVSDDKGLYHCFSCGAGGDIFSFVSNIGGLSFPEAMELLADEAGIDLVKEGYGQGGGKGASGATKESHARLHQALEAAGEYYASMLLEASAGPARTHLQERGFSAGLASDFGLGYAPVRPGGLLRHLGPLKLSREELVKSGLFSPRSLDNPSPFDRLSGRLIIPIRNARGQMVAFGGRLLDEGPLAKYLNTPETPVFKKRNLLFGAHVARAAIREKGTALVVEGYFDVMALHGAGLRHAVACMGTAVTGDHVKTLQNALPSGGGTLVLVLDRDKAGQRAAARTCRELLLPLEAEGRLGGLHVKVAQLPEGSGDPDDLLRAYAAGWGQAQAGAMFEREVVNKAMLWKEWYARLLMEEGGEVGVGKAGASAGGPHASRGDTAAFSRRSEALTDFLARLPATQQADRTFLCSLLAREAFPSDEPLRARVTSDLLQQCDEKHSAYKARETERARQQQHEQQLKQQQQKLQQPQRLQQSKEEPAPRLQQTQPPGRQQPQYPHRPPQRVTNLPAPQPSSAPVARPQSQQSQQSWAQYTPLKQTGRTPAPERQGREETRSWDEHRVSRPSYTSSTLQGSAFSSPPSSFGAPGLGDARSESLHASSLISTAQGVSASRPRPPPQKAAPQATPLPSSPPPSSFNEEDSKAIFIYEQSLIELLIADPRARARVRDFLWSTVDGLGLHEQQPPEAQQLMLSTHSHQLLFDWLMQADARTHRSSLLSFPPPSQSPALSVARLKQQFEMDVPAFPELISYFDRSLERERVPHSMDDLQRILRGALAFLVNVTVARRVEEETEFWQRRLLHLEAQREGSMASSKGHAMIAPPLRPEATASSQERYPYTRGVEEQRQERRYFQGAEPRAPYQREVSGAMSQSSWQHRSQTLQQQAQLQQERPPSLEVRLQQKAHEQRGRWPSETGEGLNNYYNSVYAHRDAQEAYLQSQRAREIRFGSSLPPIESNPPEARVGPAPGPPR 1084          
BLAST of EWM25065.1 vs. NCBI_GenBank
Match: gi|498318051|ref|WP_010632207.1| (DNA primase [Sporolactobacillus vineae])

HSP 1 Score: 266.159 bits (679), Expect = 1.173e-73
Identity = 156/396 (39.39%), Postives = 227/396 (57.32%), Query Frame = 0
Query:   79 ERIRASVPLSDVIKQHVDLDEKGDGQWMGCCPFHDDKSPSMSVSDDKGLYHCFSCGAGGDIFSFVSNIGGLSFPEAMELLADEAGIDLVKEGYGQGGGKGASGATKESHARLHQALEAAGEYYASMLLEASAG-PARTHLQERGFSAGLASDFGLGYAPVRPGGLLRHLGPLKLSREELVKSGLFSPRSLDNPSPFDRLSGRLIIPIRNARGQMVAFGGRLLDEGPLAKYLNTPETPVFKKRNLLFGAHVARAAIREKGTALVVEGYFDVMALHGAGLRHAVACMGTAVTGDHVKTLQNALPSGGGTLVLVLDRDKAGQRAAARTCRELLLPLEAEGRLGGLHVKVAQLPEGSGDPDDLLRAYAAGWGQAQAGAMFEREVVNKA---MLWKEWYAR 470
            E IR S+ + +VI ++V L ++G   + G CPFH + +PS SVS DK LYHCF CGAGG+IF+F+  I G+SFPEA++ LAD+AGID+   G      K  SG  +E+  +L   +E   ++Y  +L  A  G P   +LQER F   +   F +GYA        R L    L  E++ K+G+ + R  D+   FDR   R+I PI N RGQ VAFGGR +D G   KYLN+PE+ +F K ++L+G H+AR +IR+    +++EGY DV+  H +GL ++VA MGT++T        +AL     T+++  D D AG  A+ R        L+  G++    VK+A++PEG  DPDD +R Y         G  F R+V+ ++   M +K  Y R
Sbjct:    9 EEIRKSLDIIEVIGEYVQLKKQGRS-YTGLCPFHSEHTPSFSVSPDKQLYHCFGCGAGGNIFTFIMEIEGMSFPEAVQFLADKAGIDI---GTPLAAAKNGSG-REENRKQLMGGMELLTKFYHYLLSSAKFGKPGMAYLQERHFDTEMIKQFRIGYAVNSWNAATRLLQKRHLDLEQMEKAGMVAKRGFDHQY-FDRFRNRIIFPIFNMRGQTVAFGGRTVD-GQKPKYLNSPESTIFHKGSILYGYHLARQSIRKLNQVVLLEGYVDVIRAHQSGLTNSVASMGTSLTDKQA----SALLRMADTVIICYDSDDAGIEASFRAAS----MLQGNGKI----VKIAKMPEGM-DPDDYIRQY--------GGEQFRRDVIGESQTLMAFKMDYLR 376          
BLAST of EWM25065.1 vs. NCBI_GenBank
Match: gi|1079608813|ref|WP_070197042.1| (DNA primase, partial [Streptomyces oceani])

HSP 1 Score: 255.373 bits (651), Expect = 2.011e-71
Identity = 150/327 (45.87%), Postives = 190/327 (58.10%), Query Frame = 0
Query:   81 IRASVPLSDVIKQHVDLDEKGDGQWMGCCPFHDDKSPSMSVSDDKGLYHCFSCGAGGDIFSFVSNIGGLSFPEAMELLADEAGIDLVKE--GYGQGGGKGASGATKESHARLHQALEAAGEYYASMLLEASAGPARTHLQERGFSAGLASDFGLGYAPVRPGGLLRHLGPLKLSREELVKSGLFSPRSLDNPSPFDRLSGRLIIPIRNARGQMVAFGGRLL---DEGPLAKYLNTPETPVFKKRNLLFGAHVARAAIREKGTALVVEGYFDVMALHGAGLRHAVACMGTAVTGDHVKTLQNALPSGGGT-LVLVLDRDKAGQRAAAR 401
            +R +VP+  V+ +++ L   G G   G CPFHD+KSPS ++S  KG YHCF C  GGD   F+  +  LSF EA+E LA +AGI L  E  GYG+G  +G          RL +A   A  YYA  L    AG ART LQERGF    A  FGLGYAP     L+R L     S +EL  SGL    S  +  P DR  GRL+ PIR+  G++V FG R L   D GP  KYLNTPET +++K  +L+G  +A+  I + G A+VVEGY DVMA H AG+  A+A  GTA  G+HVK L+  L     + +V   D DKAGQ+AA R
Sbjct:   13 VRDAVPIDSVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFTISPSKGFYHCFGCEEGGDTLDFLMKVDHLSFSEAVERLAAQAGITLRYEQGGYGRGSQQG-------ERTRLFEAHRTAAVYYAEQLQGPEAGLARTFLQERGFDQDAARRFGLGYAPAGWDHLVRFLRGKGFSDKELTLSGLAQESS--SGRPIDRFRGRLLWPIRDIAGEVVGFGARKLREEDNGP--KYLNTPETAIYRKSQVLYGIDLAKRDIAKAGRAVVVEGYTDVMACHLAGVTGAIATCGTAFGGEHVKILRRVLMDNSRSEVVFTFDGDKAGQKAALR 328          
BLAST of EWM25065.1 vs. NCBI_GenBank
Match: gi|1011455747|ref|WP_062352500.1| (DNA primase [Herbidospora yilanensis])

HSP 1 Score: 255.373 bits (651), Expect = 8.752e-70
Identity = 145/329 (44.07%), Postives = 193/329 (58.66%), Query Frame = 0
Query:   81 IRASVPLSDVIKQHVDLDEKGDGQWMGCCPFHDDKSPSMSVSDDKGLYHCFSCGAGGDIFSFVSNIGGLSFPEAMELLADEAGIDLVKEGYGQGGGKGASGATKESHARLHQALEAAGEYYASMLLEASAGPARTHLQERGFSAGLASDFGLGYAPVRPGGLLRHLGPLKLSREELVKSGLFSPRSLDNPSPFDRLSGRLIIPIRNARGQMVAFGGRLL---DEGPLAKYLNTPETPVFKKRNLLFGAHVARAAIREKGTALVVEGYFDVMALHGAGLRHAVACMGTAVTGDHVKTLQNAL-PSGGGTLVLVLDRDKAGQRAAARTCRE 405
            +R   P++DVI ++V L   G G   G CPFHD+KSPS +V+  +G+Y+CF C  GGD+ SF+  I  L+F E++E LA  AG+ L    Y QGG     G  +   +RL +A  AA E+Y S L+   A  AR  L ERGF    A  FG+GYAP     L RHL     S +EL+K GL          P DR  GRLI PIR+  G ++ FG R L   D+GP  KYLNTPE+P++ K ++L+G  +A+  I ++  A+VVEGY DVMALH AG+  AVA  GTA   DH+K L+  L   G G ++   D D AGQ+AA R  ++
Sbjct:   13 VRERSPIADVIGEYVQLRNAGGGNLKGLCPFHDEKSPSFNVTPARGMYYCFGCSEGGDVISFLQKIDALTFAESVERLAGRAGVQL---RYEQGG--YVPGRQQGERSRLIEAHRAAAEFYVSNLISPEAAVARRFLSERGFERADADHFGVGYAPNEWEALSRHLMGRGFSVQELIKGGLARE---GRRGPIDRFRGRLIWPIRDITGDVIGFGARKLIEADDGP--KYLNTPESPIYHKSSVLYGIDLAKREISKRSQAVVVEGYTDVMALHLAGVPTAVATCGTAFGEDHIKVLRRILFDQGQGEVIFTFDGDSAGQKAALRAFQD 331          
BLAST of EWM25065.1 vs. NCBI_GenBank
Match: gi|663666812|ref|WP_030450681.1| (DNA primase [Herbidospora cretacea])

HSP 1 Score: 254.603 bits (649), Expect = 1.417e-69
Identity = 146/329 (44.38%), Postives = 192/329 (58.36%), Query Frame = 0
Query:   81 IRASVPLSDVIKQHVDLDEKGDGQWMGCCPFHDDKSPSMSVSDDKGLYHCFSCGAGGDIFSFVSNIGGLSFPEAMELLADEAGIDLVKEGYGQGGGKGASGATKESHARLHQALEAAGEYYASMLLEASAGPARTHLQERGFSAGLASDFGLGYAPVRPGGLLRHLGPLKLSREELVKSGLFSPRSLDNPSPFDRLSGRLIIPIRNARGQMVAFGGRLL---DEGPLAKYLNTPETPVFKKRNLLFGAHVARAAIREKGTALVVEGYFDVMALHGAGLRHAVACMGTAVTGDHVKTLQNAL-PSGGGTLVLVLDRDKAGQRAAARTCRE 405
            +R   P++DVI ++V L   G G   G CPFHD+KSPS +V+  +G+Y+CF C  GGD+ SF+  I  L+F EA+E LA  AG+ L    Y QGG     G  +   +RL +A  AA E+Y S L    A  AR  L ERGF    A  FG+GYAP     L RHL     S +EL+K GL          P DR  GRLI PIR+  G ++ FG R L   D+GP  KYLNTPE+P++ K ++L+G  +A+  I ++  A+VVEGY DVMALH AG+  AVA  GTA   DH+K L+  L   G G ++   D D AGQ+AA R  ++
Sbjct:   13 VRERSPIADVIGEYVQLRNAGGGNLKGLCPFHDEKSPSFNVTPARGMYYCFGCSEGGDVISFLQKIDALTFAEAVERLAGRAGVQL---RYEQGG--YVPGRQQGERSRLIEAHRAAAEFYVSHLTSPEAAIARRFLSERGFERADADHFGVGYAPNEWEALSRHLMGRGFSVQELIKGGLARE---GRRGPIDRFRGRLIWPIRDITGDVIGFGARKLIEADDGP--KYLNTPESPIYHKSSVLYGIDLAKREISKRSQAVVVEGYTDVMALHLAGVPTAVATCGTAFGEDHIKVLRRILFDQGQGEVIFTFDGDSAGQKAALRAFQD 331          
BLAST of EWM25065.1 vs. NCBI_GenBank
Match: gi|1011442955|ref|WP_062340062.1| (DNA primase [Herbidospora sakaeratensis])

HSP 1 Score: 254.603 bits (649), Expect = 1.787e-69
Identity = 155/362 (42.82%), Postives = 206/362 (56.91%), Query Frame = 0
Query:   81 IRASVPLSDVIKQHVDLDEKGDGQWMGCCPFHDDKSPSMSVSDDKGLYHCFSCGAGGDIFSFVSNIGGLSFPEAMELLADEAGIDLVKEGYGQGGGKGASGATKESHARLHQALEAAGEYYASMLLEASAGPARTHLQERGFSAGLASDFGLGYAPVRPGGLLRHLGPLKLSREELVKSGLFSPRSLDNPSPFDRLSGRLIIPIRNARGQMVAFGGRLL---DEGPLAKYLNTPETPVFKKRNLLFGAHVARAAIREKGTALVVEGYFDVMALHGAGLRHAVACMGTAVTGDHVKTLQNAL---PSGGGTLVLVLDRDKAGQRAAARTCRELLLPLEAEGRLGGLHVKVAQLPEGSGDPDDL 436
            +R   P++DVI ++V L   G G   G CPFHD+KSPS +V+  +G+Y+CF C  GGD+ SF+  I  L+F E++E LA  AGI L    Y QGG     G  +   +RL +A  AA E+Y S L    A  AR  L ERGF    A  FG+GYAP     L RHL     S +EL+K GL          P DR  GRLI PIR+  G ++ FG R L   D+GP  KYLNTPE+P++ K ++L+G  +A+  I ++  A+VVEGY DVMALH AG+  AVA  GTA   DH+K L+  L    +G G ++   D D AGQ+A+ R         + + R+ G +  VA  P+G  DP DL
Sbjct:   13 VRERSPIADVIGEYVQLRNAGGGNLKGLCPFHDEKSPSFNVTPARGMYYCFGCSEGGDVISFLQRIDALTFAESVERLAGRAGIQL---RYEQGG--YVPGRQQGERSRLIEAHRAAAEFYVSNLTSPEAAVARRFLSERGFERADADHFGVGYAPNEWEALSRHLMGRGFSVQELIKGGLARE---GRRGPIDRFRGRLIWPIRDITGDVIGFGARKLIEADDGP--KYLNTPESPIYHKSSVLYGIDLAKREISKRSQAVVVEGYTDVMALHLAGVPTAVATCGTAFGEDHIKVLRRILFDHENGRGEVIFTFDGDSAGQKASLRA-------FQGDQRI-GTNTFVAVQPDGL-DPCDL 355          
BLAST of EWM25065.1 vs. NCBI_GenBank
Match: gi|516859266|ref|WP_018133881.1| (DNA primase [Acaricomes phytoseiuli])

HSP 1 Score: 254.603 bits (649), Expect = 2.789e-69
Identity = 143/333 (42.94%), Postives = 194/333 (58.26%), Query Frame = 0
Query:   76 EMKERIRASVPLSDVIKQHVDLDEKGDGQWMGCCPFHDDKSPSMSVSDDKGLYHCFSCGAGGDIFSFVSNIGGLSFPEAMELLADEAGIDLVKEGYGQGGGKGASGATKESHARLHQALEA---AGEYYASMLLEASAGPARTHLQERGFSAGLASDFGLGYAPVRPGGLLRHLGPLKLSREELVKSGLFSPRSLDNPSPFDRLSGRLIIPIRNARGQMVAFGGRLL---DEGPLAKYLNTPETPVFKKRNLLFGAHVARAAIREKGTALVVEGYFDVMALHGAGLRHAVACMGTAVTGDHVKTLQNALP-SGGGTLVLVLDRDKAGQRAAAR 401
            E  E +R+ + + +V++ +V L   G G W G CPFHD++SPS +V    G +HCF CG GGD+ SF+  I  LSF EA+E LA   G +L    Y +  G+ ASG  +E   R  + L+A   AGE++   LL  +AG  R  L ERGF    A  F +G+AP    GLL HL     + EEL  +G+FS  S  N   +DR  GRLI PIR   G+ + FG R L   D+GP  KYLNTPET ++KK  +L+G  +A+ AI  +   +VVEGY DVMA H AG+  AVA  GTA   +HVK ++  L   G  +++   D D+AGQ+AA +
Sbjct:    8 ENIEELRSRIDIREVVEGYVTLKSAGIGSWKGLCPFHDERSPSFNVRPQVGQFHCFGCGEGGDVISFLQKIDHLSFTEAVENLAARIGFEL---HYEEADGRSASGPRREDIGRRQRLLDAHKIAGEFFREQLLSPAAGEGRRFLAERGFDRAAAEHFHVGFAPQGWDGLLSHLRGRGFTEEELRLTGMFSTGSSGN-RMYDRFRGRLIWPIRGIGGETIGFGARRLFEEDQGP--KYLNTPETQLYKKSQVLYGIELAKKAISRQKQLVVVEGYTDVMACHLAGVETAVATCGTAFGEEHVKVVRRLLSDDGSSSVIFTFDGDEAGQKAALK 334          
BLAST of EWM25065.1 vs. NCBI_GenBank
Match: gi|1055915831|ref|WP_067459206.1| (DNA primase [Devosia sp. S37] >gi|1031923801|gb|OAM74336.1| DNA primase [Devosia sp. S37])

HSP 1 Score: 254.218 bits (648), Expect = 5.362e-69
Identity = 151/370 (40.81%), Postives = 208/370 (56.22%), Query Frame = 0
Query:   79 ERIRASVPLSDVIKQHVDLDEK----GDGQWMGCCPFHDDKSPSMSVSDDKGLYHCFSCGAGGDIFSFVSNIGGLSFPEAMELLADEAGIDLVKEGYGQGGGKGASGATKESHAR-LHQALEAAGEYYASMLLEASAGPARTHLQERGFSAGLASDFGLGYAPVRPGGLLRHLGPLKLSREELVKSGLFSPRSLDNPSPFDRLSGRLIIPIRNARGQMVAFGGRLLDEGPLAKYLNTPETPVFKKRNLLFGAHVARAAIREKGTALVVEGYFDVMALHGAGLRHAVACMGTAVTGDHVKTLQNALPSGGGTLVLVLDRDKAGQRAAARTCRELLLPLEAEGRLGGLHVKVAQLPEGSGDPDDLLRAYAAG 443
            + IR  +P++ V+ +HV  D++    G G    CCPFH +KSPS    D +G+YHCF CG  GD F F++   G+SFPEA+E LA  AG+ +          +      +E+  R L   +E A +Y+ + L       AR +L ERG SAG  S F +G+AP    GL  HL    +S + ++ +GL + R  D+P  +DR   R++ PI + RG+++AFGGR L     AKYLN+PET +F KR  L+    ARAA RE  T +VVEGY DV+A   AG   +VA +GTA+T +HV+ L           VL  D DKAG +AA R    L+LP    G+     VK+A LPEG  DPDDL++A   G
Sbjct:    9 DEIRQRLPITQVVGEHVLWDKRKSQPGKGDMWACCPFHAEKSPSFHADDRRGIYHCFGCGVSGDHFRFLTEKAGMSFPEAVEKLAAMAGVPMP--------ARDERSEKREAEQRTLVDVMELATKYFEAALAHNIGARARGYLFERGVSAGSQSRFRIGFAPDSRNGLKEHLAANGVSAQAMIDTGLVTSRD-DDPLTYDRFRNRVMFPITDFRGRVIAFGGRALSPDVPAKYLNSPETQLFSKRQTLYNGQSARAAAREGATVIVVEGYLDVIAAVAAGFEGSVAPLGTALTEEHVQLLWRM----SDNPVLCFDGDKAGLKAAERAA-NLILPHLKPGK----SVKIATLPEGQ-DPDDLIKAQGRG 359          
BLAST of EWM25065.1 vs. NCBI_GenBank
Match: gi|1011549897|ref|WP_062442543.1| (DNA primase [Herbidospora daliensis])

HSP 1 Score: 253.062 bits (645), Expect = 5.740e-69
Identity = 146/329 (44.38%), Postives = 192/329 (58.36%), Query Frame = 0
Query:   81 IRASVPLSDVIKQHVDLDEKGDGQWMGCCPFHDDKSPSMSVSDDKGLYHCFSCGAGGDIFSFVSNIGGLSFPEAMELLADEAGIDLVKEGYGQGGGKGASGATKESHARLHQALEAAGEYYASMLLEASAGPARTHLQERGFSAGLASDFGLGYAPVRPGGLLRHLGPLKLSREELVKSGLFSPRSLDNPSPFDRLSGRLIIPIRNARGQMVAFGGRLL---DEGPLAKYLNTPETPVFKKRNLLFGAHVARAAIREKGTALVVEGYFDVMALHGAGLRHAVACMGTAVTGDHVKTLQNAL-PSGGGTLVLVLDRDKAGQRAAARTCRE 405
            +R   P++DVI ++V L   G G   G CPFHD+KSPS +V+  +G+Y+CF C  GGD+ SF+  I  L+F E++E LA  AGI L    Y QGG     G  +   +RL +A  AA E+Y S L    A  AR  L ERGF    A  FG+GYAP     L RHL     S +EL+K GL          P DR  GRLI PIR+  G ++ FG R L   D+GP  KYLNTPE+P++ K ++L+G  +A+  I ++  A+VVEGY DVMALH AG+  AVA  GTA   DH+K L+  L   G G ++   D D AGQ+AA R  ++
Sbjct:   13 VRERSPIADVIGEYVQLRNAGGGNLKGLCPFHDEKSPSFNVTPARGMYYCFGCSEGGDVISFLQRIDALTFAESVERLAGRAGIQL---RYEQGG--YVPGRQQGERSRLIEAHRAAAEFYVSNLTSPEAAVARRFLSERGFERADADHFGVGYAPNEWEALSRHLMGRGFSVQELIKGGLARE---GRRGPIDRFRGRLIWPIRDITGDVIGFGARKLIEADDGP--KYLNTPESPIYHKSSVLYGIDLAKREISKRSQAVVVEGYTDVMALHLAGVPTAVATCGTAFGEDHIKVLRRILFDQGQGEVIFTFDGDSAGQKAALRAFQD 331          
The following BLAST results are available for this feature:
BLAST of EWM25065.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106702|gb|EWM25065.1|0.000e+0100.00dna primase [Nannochloropsis gaditana][more]
gi|553193098|ref|XP_005855708.1|0.000e+098.89DNA primase [Nannochloropsis gaditana CCMP526] >gi... [more]
gi|498318051|ref|WP_010632207.1|1.173e-7339.39DNA primase [Sporolactobacillus vineae][more]
gi|1079608813|ref|WP_070197042.1|2.011e-7145.87DNA primase, partial [Streptomyces oceani][more]
gi|1011455747|ref|WP_062352500.1|8.752e-7044.07DNA primase [Herbidospora yilanensis][more]
gi|663666812|ref|WP_030450681.1|1.417e-6944.38DNA primase [Herbidospora cretacea][more]
gi|1011442955|ref|WP_062340062.1|1.787e-6942.82DNA primase [Herbidospora sakaeratensis][more]
gi|516859266|ref|WP_018133881.1|2.789e-6942.94DNA primase [Acaricomes phytoseiuli][more]
gi|1055915831|ref|WP_067459206.1|5.362e-6940.81DNA primase [Devosia sp. S37] >gi|1031923801|gb|OA... [more]
gi|1011549897|ref|WP_062442543.1|5.740e-6944.38DNA primase [Herbidospora daliensis][more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5625rna5625Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications