EWM25077.1, cds5605 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25077.1 vs. NCBI_GenBank
Match: gi|585106714|gb|EWM25077.1| (hypothetical protein Naga_100098g16 [Nannochloropsis gaditana]) HSP 1 Score: 987.638 bits (2552), Expect = 0.000e+0 Identity = 483/483 (100.00%), Postives = 483/483 (100.00%), Query Frame = 0
Query: 1 MSQGFYSTDPFGDPYCPPPVPTSTPVSNPFGEGKPTPFDTDLFSNKAVSMTHLPPLSIPTPVGNPFEDVDAFAASTPLVPAKPVASPAEFGLAPASPLQFKELHEAIRPGTGDRLDLQSRLSRTCGRATASAKPAYPDASDFDPFSPREKASPRLSAQAALKGDQDTLFSSTAPSPLTPTSMPALPSVPQTRDSALDDSWSIEWEPPHPTRAVSDSVLRNEPKPVKKLAASTPASMLSSSSEGFGSPSTFCMPVQIPDGVVLARVSARSIIGREWKPVYWVIVNRRLWIYRSKADYYPTDYIKDPFNKRIKKCIPLRESLQLTCIKNKLYPGEKRTLYTFGMESIEEGGKKTMIAKFAAYVHNDLVIAVSKSLFATQRGHLRCLVSKRFYREHARTPRYSINRSLALRDARSCRYLSRQATERQLSIVSEWVLMRGLVTETDAYIVFMALLERQAPRNTALKITTDDAEKEDVPRWLSTVCIS 483
MSQGFYSTDPFGDPYCPPPVPTSTPVSNPFGEGKPTPFDTDLFSNKAVSMTHLPPLSIPTPVGNPFEDVDAFAASTPLVPAKPVASPAEFGLAPASPLQFKELHEAIRPGTGDRLDLQSRLSRTCGRATASAKPAYPDASDFDPFSPREKASPRLSAQAALKGDQDTLFSSTAPSPLTPTSMPALPSVPQTRDSALDDSWSIEWEPPHPTRAVSDSVLRNEPKPVKKLAASTPASMLSSSSEGFGSPSTFCMPVQIPDGVVLARVSARSIIGREWKPVYWVIVNRRLWIYRSKADYYPTDYIKDPFNKRIKKCIPLRESLQLTCIKNKLYPGEKRTLYTFGMESIEEGGKKTMIAKFAAYVHNDLVIAVSKSLFATQRGHLRCLVSKRFYREHARTPRYSINRSLALRDARSCRYLSRQATERQLSIVSEWVLMRGLVTETDAYIVFMALLERQAPRNTALKITTDDAEKEDVPRWLSTVCIS
Sbjct: 1 MSQGFYSTDPFGDPYCPPPVPTSTPVSNPFGEGKPTPFDTDLFSNKAVSMTHLPPLSIPTPVGNPFEDVDAFAASTPLVPAKPVASPAEFGLAPASPLQFKELHEAIRPGTGDRLDLQSRLSRTCGRATASAKPAYPDASDFDPFSPREKASPRLSAQAALKGDQDTLFSSTAPSPLTPTSMPALPSVPQTRDSALDDSWSIEWEPPHPTRAVSDSVLRNEPKPVKKLAASTPASMLSSSSEGFGSPSTFCMPVQIPDGVVLARVSARSIIGREWKPVYWVIVNRRLWIYRSKADYYPTDYIKDPFNKRIKKCIPLRESLQLTCIKNKLYPGEKRTLYTFGMESIEEGGKKTMIAKFAAYVHNDLVIAVSKSLFATQRGHLRCLVSKRFYREHARTPRYSINRSLALRDARSCRYLSRQATERQLSIVSEWVLMRGLVTETDAYIVFMALLERQAPRNTALKITTDDAEKEDVPRWLSTVCIS 483
BLAST of EWM25077.1 vs. NCBI_GenBank
Match: gi|585105688|gb|EWM24296.1| (hypothetical protein Naga_100047g23 [Nannochloropsis gaditana]) HSP 1 Score: 69.707 bits (169), Expect = 4.285e-9 Identity = 36/102 (35.29%), Postives = 62/102 (60.78%), Query Frame = 0
Query: 258 DGVVLARVSARSIIGREWKPVYWVIVNRRLWIYRSKADYYPTDYIKDPFNKRIKKCIPLRESLQLTCIKNKLYPGEKRTLYTFGMESIEEGGKKTMIAKFAA 359
+G +LAR+S R++I +EWK +W I +L +YRS+ D++ +P +KK IPL ++L+ + + K Y G LY F +E + + G +++AKFA+
Sbjct: 307 EGTILARISVRTLIVKEWKDTFWTINKGKLLLYRSR-----EDFLYNPVGVMVKKDIPLCDNLRCSEVTCKPYKGYG-DLYHFTLEEMLDYG-PSLVAKFAS 401 The following BLAST results are available for this feature:
BLAST of EWM25077.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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