EWM25163.1, cds5588 (CDS) Nannochloropsis gaditana

Overview
NameEWM25163.1
Unique Namecds5588
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:385821..385895 -
Alignment locationCM002466.1:383234..385591 -

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Properties
Property NameValue
Protein idEWM25163.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100016g2.2972.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:385821..385895 -
CM002466.1supercontigCM002466.1:383234..385591 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0006811ion transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0005216ion channel activity
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom
Homology
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BLAST of EWM25163.1 vs. NCBI_GenBank
Match: gi|585106801|gb|EWM25163.1| (hypothetical protein Naga_100016g2 [Nannochloropsis gaditana])

HSP 1 Score: 1615.13 bits (4181), Expect = 0.000e+0
Identity = 810/810 (100.00%), Postives = 810/810 (100.00%), Query Frame = 0 
Query:    1 MLALGGQAMAGGDMDMSHSINKPSKVLDEDLHGSHGHKAHDASHGHHGGKDHGHGGDHGHGHHDLTPEELNWRCRLFLTLEEPDYSLAARLFSAFINACLFMSIIAFMMGTMPEFKHFPYVCPPHMIVGYTCWDGYGMPTKVMPVDVYHKGSYLEGKKMYDEYLEKKKEKEAAAGGTKGGYGGAGGGGGGYAPAGAGAAGGAGDYAGAGGGPAAVGGYAPGAGGGAGYPPAGGTPGGAGGAGAGYTSGTGGAARGGYPPAGGAAGAGGPAAGGAGYAGGYPTSGAGGGATTGGYAGAGSPGGGGAGGYAPAGGAGAAGGGGYAGAPTGGAGGGGGYPSAGTGAGYPSAGGAGGYPPSGGGYSPAGGYRPAAGGYPPATGGYAPMGYGGASTGSYPPRALSDLLGDTEEEPSWMSEVAPTTPGVGLFNLNGLVQPEVEVGHRRLAYKKKRPIGEPYCEEICEYEPDKEIEIAEGFAMAAFTIDYLGRLFTAHAVPWRVLNHGAAHDPSAKHYEPNGLFKTVAYFFSFMMLVDLLALGPYYAKTILDRIATDVASSQTMRALGIVRVLRIIPFYMHMIVSTKGLLLQDKAPHIFHLFNFSVLFNFLRLGSYTEGAPLFFSTLKACIPAISVAVVAMVCLAMVFASLIFVVERGRFRVTPEFPDGAFLTARSQRDPTLVEPAHANSFMSMWYVISDTTTMPTIAMLTPVTILGEVFDVMLDYMSLLVLTLPIAIVAREFNEQYTSFFKDWNREDIVMSSSSEDEGHSGGLDDGEVDDFDAAVAKLAAAQEKGAKHRSTRFSFDEESKIGEFRV 810
            MLALGGQAMAGGDMDMSHSINKPSKVLDEDLHGSHGHKAHDASHGHHGGKDHGHGGDHGHGHHDLTPEELNWRCRLFLTLEEPDYSLAARLFSAFINACLFMSIIAFMMGTMPEFKHFPYVCPPHMIVGYTCWDGYGMPTKVMPVDVYHKGSYLEGKKMYDEYLEKKKEKEAAAGGTKGGYGGAGGGGGGYAPAGAGAAGGAGDYAGAGGGPAAVGGYAPGAGGGAGYPPAGGTPGGAGGAGAGYTSGTGGAARGGYPPAGGAAGAGGPAAGGAGYAGGYPTSGAGGGATTGGYAGAGSPGGGGAGGYAPAGGAGAAGGGGYAGAPTGGAGGGGGYPSAGTGAGYPSAGGAGGYPPSGGGYSPAGGYRPAAGGYPPATGGYAPMGYGGASTGSYPPRALSDLLGDTEEEPSWMSEVAPTTPGVGLFNLNGLVQPEVEVGHRRLAYKKKRPIGEPYCEEICEYEPDKEIEIAEGFAMAAFTIDYLGRLFTAHAVPWRVLNHGAAHDPSAKHYEPNGLFKTVAYFFSFMMLVDLLALGPYYAKTILDRIATDVASSQTMRALGIVRVLRIIPFYMHMIVSTKGLLLQDKAPHIFHLFNFSVLFNFLRLGSYTEGAPLFFSTLKACIPAISVAVVAMVCLAMVFASLIFVVERGRFRVTPEFPDGAFLTARSQRDPTLVEPAHANSFMSMWYVISDTTTMPTIAMLTPVTILGEVFDVMLDYMSLLVLTLPIAIVAREFNEQYTSFFKDWNREDIVMSSSSEDEGHSGGLDDGEVDDFDAAVAKLAAAQEKGAKHRSTRFSFDEESKIGEFRV
Sbjct:    1 MLALGGQAMAGGDMDMSHSINKPSKVLDEDLHGSHGHKAHDASHGHHGGKDHGHGGDHGHGHHDLTPEELNWRCRLFLTLEEPDYSLAARLFSAFINACLFMSIIAFMMGTMPEFKHFPYVCPPHMIVGYTCWDGYGMPTKVMPVDVYHKGSYLEGKKMYDEYLEKKKEKEAAAGGTKGGYGGAGGGGGGYAPAGAGAAGGAGDYAGAGGGPAAVGGYAPGAGGGAGYPPAGGTPGGAGGAGAGYTSGTGGAARGGYPPAGGAAGAGGPAAGGAGYAGGYPTSGAGGGATTGGYAGAGSPGGGGAGGYAPAGGAGAAGGGGYAGAPTGGAGGGGGYPSAGTGAGYPSAGGAGGYPPSGGGYSPAGGYRPAAGGYPPATGGYAPMGYGGASTGSYPPRALSDLLGDTEEEPSWMSEVAPTTPGVGLFNLNGLVQPEVEVGHRRLAYKKKRPIGEPYCEEICEYEPDKEIEIAEGFAMAAFTIDYLGRLFTAHAVPWRVLNHGAAHDPSAKHYEPNGLFKTVAYFFSFMMLVDLLALGPYYAKTILDRIATDVASSQTMRALGIVRVLRIIPFYMHMIVSTKGLLLQDKAPHIFHLFNFSVLFNFLRLGSYTEGAPLFFSTLKACIPAISVAVVAMVCLAMVFASLIFVVERGRFRVTPEFPDGAFLTARSQRDPTLVEPAHANSFMSMWYVISDTTTMPTIAMLTPVTILGEVFDVMLDYMSLLVLTLPIAIVAREFNEQYTSFFKDWNREDIVMSSSSEDEGHSGGLDDGEVDDFDAAVAKLAAAQEKGAKHRSTRFSFDEESKIGEFRV 810
The following BLAST results are available for this feature:
BLAST of EWM25163.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106801|gb|EWM25163.1|0.000e+0100.00hypothetical protein Naga_100016g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5602rna5602Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications