EWM25159.1, cds5558 (CDS) Nannochloropsis gaditana

Overview
NameEWM25159.1
Unique Namecds5558
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:315451..315484 +
Alignment locationCM002466.1:315669..316342 +

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Properties
Property NameValue
Protein idEWM25159.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100016g35.2968.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:315451..315484 +
CM002466.1supercontigCM002466.1:315669..316342 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM25159.1 vs. NCBI_GenBank
Match: gi|585106797|gb|EWM25159.1| (hypothetical protein Naga_100016g35 [Nannochloropsis gaditana])

HSP 1 Score: 477.633 bits (1228), Expect = 1.553e-170
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0 
Query:    1 MALILNRLYLPGVFMTALCVIFALGAVLTAEFASGMAMVSGSDGFAKVNLGLWHGIAHIAGRRQVFRLEWCDASSPSFDGPYCAQLQVCRVAACAGVCLLVAVSVLLALLATNAVRTRFEAPLTKIVAGTFSMAALCFGTCLGVWVALVVSLSTKEEDSKARLSIGMSWLAEGGAFILAFLLAIKMLQTATRIEGEARIATDMNKRARNGTQTSYPNKPEKPRSRPSHGAGDLEA 235
            MALILNRLYLPGVFMTALCVIFALGAVLTAEFASGMAMVSGSDGFAKVNLGLWHGIAHIAGRRQVFRLEWCDASSPSFDGPYCAQLQVCRVAACAGVCLLVAVSVLLALLATNAVRTRFEAPLTKIVAGTFSMAALCFGTCLGVWVALVVSLSTKEEDSKARLSIGMSWLAEGGAFILAFLLAIKMLQTATRIEGEARIATDMNKRARNGTQTSYPNKPEKPRSRPSHGAGDLEA
Sbjct:    1 MALILNRLYLPGVFMTALCVIFALGAVLTAEFASGMAMVSGSDGFAKVNLGLWHGIAHIAGRRQVFRLEWCDASSPSFDGPYCAQLQVCRVAACAGVCLLVAVSVLLALLATNAVRTRFEAPLTKIVAGTFSMAALCFGTCLGVWVALVVSLSTKEEDSKARLSIGMSWLAEGGAFILAFLLAIKMLQTATRIEGEARIATDMNKRARNGTQTSYPNKPEKPRSRPSHGAGDLEA 235
The following BLAST results are available for this feature:
BLAST of EWM25159.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106797|gb|EWM25159.1|1.553e-170100.00hypothetical protein Naga_100016g35 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5572rna5572Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications